Pregenerated sensors for CDC73 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026361Ensembl transcript IDs: ENSMUST00000018337.9, ENSMUST00000159794.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGATATATTGATACAGATGCTGTTACTTGATCTGGATACAAGGTaGATTAAGAACAAGCCTGACAGTGGTGCCCTGACTCCCTCATTC | + |
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Preference number: 1 (lower is better) Translates to: TDILIQMLLLDLDTR*IKNKPDSGALTPSF Trigger: GAATGAGGGAGTCAGGGCACCACTGTCAGGCTTGTTCTTAATTCACCTTGTATCCAGATCAAGTAACAGCATCTGTATCAATATATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CCA 90 bp | CAAAGTGCTTCTGTAAACATTAGGAAGCCTTTTCTAAAGAACCAGTaGTTCTTGGACTCGGTGCTGAAACAAACGCTCTTAATCATCCAA | + |
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Preference number: 1 (lower is better) Translates to: QSASVNIRKPFLKNQ*FLDSVLKQTLLIIQ Trigger: TTGGATGATTAAGAGCGTTTGTTTCAGCACCGAGTCCAAGAACCACTGGTTCTTTAGAAAAGGCTTCCTAATGTTTACAGAAGCACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR GCA 90 bp | TCTTTGTCTCCTAGAGGTTGTGACTTCTATGTATCTTTCAAGTTTTaGCTTATCAGTAAGTTATTAATTTGGTGCCAACTTTGGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: SLSPRGCDFYVSFKF*LISKLLIWCQLWPT Trigger: TGTTGGCCAAAGTTGGCACCAAATTAATAACTTACTGATAAGGCAAAACTTGAAAGATACATAGAAGTCACAACCTCTAGGAGACAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGCTAAGTGTTTTACTGTaGTCCCCCAATTTGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: HGSESKSVAEVLALGWRWLSVLL*SPNLIA Trigger: GGCTATCAAATTGGGGGAGCACAGTAAAACACTTAG...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTTTCAGTGTACAGAAGTaGCATCTTCTCCCTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSFSVQK*HLLPST Trigger: AGTGGAAGGGAGAAGATGGCACTTCTGTACACTGAA...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTTTGACTTGAGTAGACCGCTGAAGACCTATTTCCAAGGGGGCACTCCTATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SSFDLSRPLKTYFQGGTPMCSTL*VGLPFR Trigger: CCGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...AGGAGTGCCCCCTTGGAAATAGGTCTTCAGCGGTCTACTCAAGTCAAAAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| 3UTR CAA 90 bp | GCAGCACAGTGTGGACATCAGCAGCTTTCCTCTAAGTCCATGATCTaGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: AAQCGHQQLSSKSMI*ERLKSLEPQLHTDQ Trigger: TTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATCATGGACTTAGAGGAAAGCTGCTGATGTCCACACTGTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGAAGAACAATGAACGATaGCATGGATCCTCAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: HGSESKSVAEVLALGWRWKNNER*HGSSKC Trigger: GCATTTTGAGGATCCATGTCATCGTTCATTGTTCTT...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGAAGCCACGTTCTAAATaGCTAATTTTGACCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGSESKSVAEVLALGWRWKPRSK*LILTSS Trigger: TGAGCTGGTCAAAATTAGTCATTTAGAACGTGGCTT...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAATGGATGGGAGGCATTaGCCCTTTGAAGCACACAGC | + |
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Preference number: 2 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRMDGRH*PFEAHS Trigger: GCTGTGTGCTTCAAAGGGGCAATGCCTCCCATCCAT...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTTATTCCTGTATAAGCTaGCGTTCTGCCTCTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSYSCIS*RSASAK Trigger: TTTAGCAGAGGCAGAACGGCAGCTTATACAGGAATA...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAGAATGCGCAAAGCACTaGGTCAGGTGCTGCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRECAKH*VRCCCR Trigger: TCTACAGCAGCACCTGACCCAGTGCTTTGCGCATTC...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTAAGTCTGACCCAAGTTaGAGGCTAAGTAGCTTTACT | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSKSDPS*RLSSFT Trigger: AGTAAAGCTACTTAGCCTCCAACTTGGGTCAGACTT...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTCTAAGAGATAGTCACTaGGGAAAACAACATACAAGG | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSLRDSH*GKQHTR Trigger: CCTTGTATGTTGTTTTCCTCAGTGACTATCTCTTAG...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGATGAAACAAAGACTATaGTACAGAAGGGAGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HGSESKSVAEVLALGWRWMKQRL*YRREKK Trigger: CTTCTTCTCCCTTCTGTATCATAGTCTTTGTTTCAT...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTGCACTCTCATCACTTTaGGTTAAGAGTCACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSALSSL*VKSHRN Trigger: ATTTCTGTGACTCTTAACCCAAAGTGATGAGAGTGC...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTTTCAGTGATCAGTCCTaGATAAACTTTCAAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSFSDQS*INFQTA Trigger: AGCAGTTTGAAAGTTTATTCAGGACTGATCACTGAA...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTAAGAATGGGAAACTGTaGACAGAACCTACTAAAACT | + |
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Preference number: 2 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSKNGKL*TEPTKT Trigger: AGTTTTAGTAGGTTCTGTCCACAGTTTCCCATTCTT...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CAA 90 bp | CCTCTTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTaGTCAACTCACACCATCCTAGCAAAGGAATCCAACTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PLLQDLFFVQVGFYL*STHTILAKESNSLA Trigger: GGCCAGGGAGTTGGATTCCTTTGCTAGGATGGTGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCCTACTAGGAATTCACTaGCAAAGGAAACAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPLLGIH*QRKQSP Trigger: TGGACTCTGTTTCCTTTGCCAGTGAATTCCTAGTAG...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CAA 90 bp | GCTTCTGTAAACATTAGGAAGCCTTTTCTAAAGAACCAGTGGTTCTaGGACTCGGTGCTGAAACAAACGCTCTTAATCATCCAAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ASVNIRKPFLKNQWF*DSVLKQTLLIIQEA Trigger: GGCTTCTTGGATGATTAAGAGCGTTTGTTTCAGCACCGAGTCCAAGAACCACTGGTTCTTTAGAAAAGGCTTCCTAATGTTTACAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAAGGCTGACTTTCAACTaGTTTCATAGTTACTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRRLTFN*FHSYFP Trigger: AGGGAAGTAACTATGAAATCAGTTGAAAGTCAGCCT...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCTCCAAGATACTCTTATaGACAGTTCCTAACACACAA | + |
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Preference number: 2 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPSKILL*TVPNTQ Trigger: TTGTGTGTTAGGAACTGTTCATAAGAGTATCTTGGA...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGATTTGAAAACATTAGCTaGTTTTCTTCTGGAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRFENIS*FSSGEP Trigger: GGGTTCTCCAGAAGAAAAGCAGCTAATGTTTTCAAA...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | GATGCTTCCCCATTGAGATATCCAAGTAGATCTTTTCGGTCGGGTCTTCTAACCACAGGATGCGAAAGGTaGACATTATTAAGGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: DASPLRYPSRSFRSGLLTTGCER*TLLRRN Trigger: ATTTCTCCTTAATAATGTGCACCTTTCGCATCCTGT...GGTTAGAAGACCCGACCGAAAAGATCTACTTGGATATCTCAATGGGGAAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| 3UTR CAA 90 bp | AACTGTCCTCCATCTCAACCAACAAGGCCTTCTTGTTTCTCCTTTTaGGTATACTTTCCTTTGTCTACTGGTTCCAACTTTGGCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: NCPPSQPTRPSCFSF*VYFPLSTGSNFGTK Trigger: TTTTGTGCCAAAGTTGGAACCAGTAGACAAAGGAAAGTATACCAAAAAGGAGAAACAAGAAGGCCTTGTTGGTTGAGATGGAGGACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGAAAAGTTTGCTTGTATaGATGGGAGGCATTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQKSLLV*MGGIAP Trigger: AGGGGCAATGCCTCCCATCCATACAAGCAAACTTTT...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGCAGAAGAATAATGACTaGCTTGTAGAGCAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQQKNND*LVEQSR Trigger: TCTGCTCTGCTCTACAAGTCAGTCATTATTCTTCTG...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGGGATGGAGGTGGCTCTaGGTTTATTTTCAAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWGWRWL*VYFQAN Trigger: GTTGGCTTGAAAATAAACCCAGAGCCACCTCCATCC...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGCGGTGGATACTACCATaGAAGGAAATAAGGTTACCT | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQRWILP*KEIRLP Trigger: AGGTAACCTTATTTCCTTCCATGGTAGTATCCACCG...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACACTAGGAAAAGAACAATaGACGATGACATGGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTLGKEQ*TMTWIL Trigger: GAGGATCCATGTCATCGTTCATTGTTCTTTTCCTAG...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAGGATCTAAGAGCAGATaGCCAAAGGAATCAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTGSKSR*PKESEV Trigger: AACTTCTGATTCCTTTGGTCATCTGCTCTTAGATCC...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAGCTCTATTCAGGAACTaGTCTGCTTCACAAACATCA | + |
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Preference number: 2 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTALFRN*SASQTS Trigger: TGATGTTTGTGAAGCAGAGCAGTTCCTGAATAGAGC...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGTTTAAGAACTTTCCCTaGGGTAGGGGACTAAAATCA | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQFKNFP*GRGLKS Trigger: TGATTTTAGTCCCCTACCCCAGGGAAAGTTCTTAAA...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGCGGATACACACAGGCTaGCTTTCAACTGATTTCATA | + |
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Preference number: 2 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWRIHTG*LSTDFI Trigger: TATGAAATCAGTTGAAAGTCAGCCTGTGTGTATCCG...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGCCCCCGGATTCCATCTaGATAAATAACTTCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWPPDSI*INNFPF Trigger: AAATGGGAAGTTATTTATTCAGATGGAATCCGGGGG...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGAGCAAATGTGTTCTTTaGTGCCTGGGAATTTATCAT | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQSKCVL*CLGIYH Trigger: ATGATAAATTCCCAGGCACCAAAGAACACATTTGCT...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAAACCTGCTGCCTTTATaGAGACTTCTAGAAATTAAC | + |
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Preference number: 2 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTNLLPL*RLLEIN Trigger: GTTAATTTCTAGAAGTCTTCATAAAGGCAGCAGGTT...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR GCA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGGTGTCCTTCTTCATTTaGAAGTTCTTGATGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: RCFQLLCVTSALCTLLVQVSFFI*KFLMNS Trigger: TGAATTCATCAAGAACTTGCAAATGAAGAAGGACAC...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGTACTGGTTCCAACTTTaGCACAAAACATACCATGAA | + |
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Preference number: 2 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWYWFQL*HKTYHE Trigger: TTCATGGTATGTTTTGTGCCAAAGTTGGAACCAGTA...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR GCA 72 bp | TGTTCCCTGGTGCATCTGCTCTCCCATTTCCATTCCTaGTGCCTCACTAAGCCCAGTGGCCTCCTTGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: CSLVHLLSHFHS*CLTKPSGLLVS Trigger: ACTGACAAGGAGGCCACTGGGCTTAGTGAGGCAGCAGGAATGGAAATGGGAGAGCAGATGCACCAGGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CCA 72 bp | CCTCAACCCATTAAGCCATCCCAGAACCTTGTTCCCTaGTGCATCTGCTCTCCCATTTCCATTCCTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PQPIKPSQNLVP*CICSPISIPAA Trigger: GGCAGCAGGAATGGAAATGGGAGAGCAGATGCACCAGGGAACAAGGTTCTGGGATGGCTTAATGGGTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR GCA 72 bp | CAACCCATTAAGCCATCCCAGAACCTTGTTCCCTGGTaGATCTGCTCTCCCATTTCCATTCCTGCTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: QPIKPSQNLVPW*ICSPISIPAAS Trigger: TGAGGCAGCAGGAATGGAAATGGGAGAGCAGATGCACCAGGGAACAAGGTTCTGGGATGGCTTAATGGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CAA 90 bp | GATGCTTCCCCATTGAGATATCCAAGTAGATCTTTTCGGTCGGGTCTTCTAACCGTAGTACTCTCTGGGTaGGCCTTCCTTTCCGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: DASPLRYPSRSFRSGLLTVVLSG*AFLSGP Trigger: GGGACCGGAAAGGAAGGCCAACCCAGAGAGTACTAC...GGTTAGAAGACCCGACCGAAAAGATCTACTTGGATATCTCAATGGGGAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| 3UTR CCA 72 bp | GAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATaGAGGTGGCTCTGGGTTTATTTTCAAGCCAACAAA | + |
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Preference number: 3 (lower is better) Translates to: ESKSVAEVLALG*RWLWVYFQANK Trigger: TTTGTTGGCTTGAAAATAAACCCAGAGCCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CCA 72 bp | CACAAGCATAATGAAACTGAGCTCCCCATAAGACTCTaGAAGGTGGTGTACTTCCAGGACACCTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HKHNETELPIRL*KVVYFQDTLAA Trigger: TGCTGCCAAGGTGTCCTGGAAGTACACCACCTTCCAGAGTCTTATGGGGAGCTCAGTTTCATTATGCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR-3UTR CAA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGAAGCAAATGTGTTCTTaGGTGCCTGGGAATTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: HGSESKSVAEVLALGWRWKQMCS*VPGNLS Trigger: TGATAAATTCCCAGGCACCAAAGAACACATTTGCTT...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR GCA 72 bp | ACATCTCTGTACTTCCAAAACCTCTCTAACAGCTTCTaGACTAAAGCCACAGCCAACAGCTCCTCCTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: TSLYFQNLSNSF*TKATANSSSST Trigger: GGTTGAGGAGGAGCTGTTGGCTGTGGCTTTAGTGCAGAAGCTGTTAGAGAGGTTTTGGAAGTACAGAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTCTTGAAGTCCATGGCTaGTTTCCTCTATCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSLEVHG*FPLSRK Trigger: TTTTCTTGATAGAGGAAACAAGCCATGGACTTCAAG...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | CGATGGCAAACCCCTTGCCTTGAGTGTACAAGGCCCTaGATCCTTAGTGTTGTAAAATGGTTATCTCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RWQTPCLECTRP*ILSVVKWLSLL Trigger: TAGCAGAGATAACCATTTTACAACACTAAGGATCCAGGGCCTTGTACACTCAAGGCAAGGGGTTTGCCATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | GGATCAACTTATTTTCCTCTGGCTACCCAGATAAAATaGTCAACTTTGGGTGAAGGATGTAGCTCGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSTYFPLATQIK*STLGEGCSSMA Trigger: TGCCATCGAGCTACATCCTTCACCCAAAGTTGACCATTTTATCTGGGTAGCCAGAGGAAAATAAGTTGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAGGAGGCATTGCCCCTTaGAAGCACACAGCATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTGGIAP*KHTASN Trigger: GTTTGATGCTGTGTGCTTCAAAGGGGCAATGCCTCC...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | ACTGCCTCTTCTCCAGGATTTATTCTTTGTACAAGTTaGATTCTACCTGTTGTCAACTCACACCATCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TASSPGFILCTS*ILPVVNSHHPS Trigger: GCTAGGATGGTGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAAGAGGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAGGCAATTCTTTTGACTaGTATGTGTGTACATATACG | + |
|
Preference number: 3 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRGNSFD*YVCTYT Trigger: CGTATATGTACACACATACAAGTCAAAAGAATTGCC...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGATCCAGGATTTATTCTTaGTACAAGTTGGATTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRSRIYS*YKLDST Trigger: GGTAGAATCCAACTTGTACAAAGAATAAATCCTGGA...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | TCTGTAAACATTAGGAAGCCTTTTCTAAAGAACCAGTaGTTCTTGGACTCGGTGCTGAAACAAACGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SVNIRKPFLKNQ*FLDSVLKQTLL Trigger: TAAGAGCGTTTGTTTCAGCACCGAGTCCAAGAACCACTGGTTCTTTAGAAAAGGCTTCCTAATGTTTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACACAGAAGCAAGATGGCTaGAAGAGCCTAATAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTQKQDG*KSLITP Trigger: AGGAGTTATTAGGCTCTTCAAGCCATCTTGCTTCTG...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR TCA 72 bp | GATGATACTGAAAACAACGAGTTCAGTGATCAGTCCTaGATAAACTTTCAAACTGCTCCACTTCGAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: DDTENNEFSDQS*INFQTAPLREH Trigger: ATGTTCTCGAAGTGGAGCAGTTTGAAAGTTTATTCAGGACTGATCACTGAACTCGTTGTTTTCAGTATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR TCA 72 bp | CGCAGGTATATTCAAGGCTTAAGCAATACAGTATCTTaGAGTCCATGGCTTGTTTCCTCTATCAAGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRYIQGLSNTVS*SPWLVSSIKKR Trigger: TCTTTTCTTGATAGAGGAAACAAGCCATGGACTTCAAGATACTGTATTGCTTAAGCCTTGAATATACCTGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR GCA 72 bp | CAGAAAGACAACAACATCCCAAACTCACAATACTTCTaGCTTCTTGGTAGGTATACATTAGGTATGTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: QKDNNIPNSQYF*LLGRYTLGMLY Trigger: GTATAACATACCTAATGTATACCTACCAAGAAGGCAGAAGTATTGTGAGTTTGGGATGTTGTTGTCTTTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | GTGAATGAACTACTGTGTTCTCTACTAGGAATTCACTaGCAAAGGAAACAGAGTCCAATAAAATATCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VNELLCSLLGIH*QRKQSPIKYQD Trigger: GTCTTGATATTTTATTGGACTCTGTTTCCTTTGCCAGTGAATTCCTAGTAGAGAACACAGTAGTTCATTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGACCAACAAGGCCTTCTaGTTTCTCCTTTTTGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWTNKAF*FLLFGI Trigger: TATACCAAAAAGGAGAAACAAGAAGGCCTTGTTGGT...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGTTGGTATACTTTCCTTaGTCTACTGGTTCCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWLVYFP*STGSNF Trigger: AAAGTTGGAACCAGTAGACAAAGGAAAGTATACCAA...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CCA 72 bp | TGTTTCATTTTCAGACACGTAAGCAAATGTGTTCTTTaGTGCCTGGGAATTTATCATTATTTAGGGATAATG | + |
|
Preference number: 3 (lower is better) Translates to: CFIFRHVSKCVL*CLGIYHYLGIM Trigger: CATTATCCCTAAATAATGATAAATTCCCAGGCACCAAAGAACACATTTGCTTACGTGTCTGAAAATGAAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGSESKSVAEVLALGWRWWSSHS*ARRTPR Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGACCTATTTCCAAGGGGGCACTCCTGTCTATGCTTGCTGATGTTGATGCAAAAAGCGACTCGGTaGCCGGCAGATGCTGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: AEDLFPRGHSCLCLLMLMQKATR*PADAAI Trigger: GATCGCAGCATCTGCCGGCCACCGAGTCGCTTTTTG...CATCAACATCAGCAAGCATAGACAGGAGTGCCCCCTTGGAAATAGGTCTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
||
| 3UTR CAA 72 bp | CAGCTCCTCCTCAACCCATTAAGCCATCCCAGAACCTaGTTCCCTGGTGCATCTGCTCTCCCATTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLNPLSHPRT*FPGASALPFPF Trigger: GAATGGAAATGGGAGAGCAGATGCACCAGGGAACAAGGTTCTGGGATGGCTTAATGGGTTGAGGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAGGCTGCATTTGGAGCTaGCCGTTGTTCAGGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRGCIWS*PLFRGT Trigger: CGTGCCCCTGAACAACGGCCAGCTCCAAATGCAGCC...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTGGGCACTCCTGTCTATaGTTGCTGATGTTGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSGHSCL*LLMLML Trigger: AAGCATCAACATCAGCAAGCATAGACAGGAGTGCCC...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTGGCCAACCTTTGAATTaGCAAGCAGGACCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSGQPLN*QAGPCT Trigger: TGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCC...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | ATAAGACTCTGGAAGGTGGTGTACTTCCAGGACACCTaGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRLWKVVYFQDT*AAQCGHQQLSS Trigger: AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACACCACCTTCCAGAGTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCTTTTGACTTGAGTAGACCGCTGAAGACCTATTTCCAAGGGGGCACTCCTGCCAAAGAAGACAGTTaGAACACATGGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFDLSRPLKTYFQGGTPAKEDS*NTWQAL Trigger: CAGAGCCTGCCATGTGTTGCAACTGTCTTCTTTGGC...AGGAGTGCCCCCTTGGAAATAGGTCTTCAGCGGTCTACTCAAGTCAAAAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCGCCATGGCCAACCTTTaGATTGCCAAGCAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPAMANL*IAKQDL Trigger: AAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGC...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGAGCTGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRAVPPG*IWSFLL Trigger: GAGAAGAAAAGACCAGATGCAACCAGGGGGCACAGC...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | TCCATTCCTGCTGCCTCACTAAGCCCAGTGGCCTCCTaGTCAGTCCTTAAAATAGTAAGTATGATCCTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SIPAASLSPVAS*SVLKIVSMILA Trigger: CGCTAGGATCATACTTACTATTTTAAGGACTGACAAGGAGGCCACTGGGCTTAGTGAGGCAGCAGGAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR TCA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTTTGATGCTTCCCCATTaGGATATCCAAGTAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSLMLPH*DIQVDL Trigger: AAGATCTACTTGGATATCTCAATGGGGAAGCATCAA...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCGACAAAGACCTAATCTaGTCAGTCTGCACGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPDKDLI*SVCTIP Trigger: AGGGATCGTGCAGACTGAGCAGATTAGGTCTTTGTC...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCCCCAAACTACATAGTTaGTCTTCACATTCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPPKLHS*SSHSWA Trigger: GGCCCAAGAATGTGAAGACCAACTATGTAGTTTGGG...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR TCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATATCACTTCATCCCCCTTaGCCACGATCTCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTISLHPP*PRSPSS Trigger: AGAAGAAGGAGATCGTGGTCAAGGGGGATGAAGTGA...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACATGGGCTGCAGGAGTTTaGGTCTTACGAGCAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTWAAGV*VLRADA Trigger: TGCATCTGCTCGTAAGACTCAAACTCCTGCAGCCCA...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIMCSTL*VGLPFR Trigger: CCGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCCACGACCTTCTTCTCTaGCTTTTACAGATTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPHDLLL*LLQIEE Trigger: TTCTTCAATCTGTAAAAGCCAGAGAAGAAGGTCGTG...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCCCAACTTTATAGAAGCTTTCAGTGTACAGAAGTGCCATCTTCTCCCACAGGATGCGAAAGGTaGACATTATTAAGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQLYRSFQCTEVPSSPTGCER*TLLRRN Trigger: ATTTCTCCTTAATAATGTGCACCTTTCGCATCCTGT...GGGAGAAGATGGCACTTCTGTACACTGAAAGCTTCTATAAAGTTGGGGAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAACGATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTITISFF*MLYCRR Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATCGT...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAACGATCCCTTCTTTATaGCCTTCCAAACGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTTIPSL*PSKRAA Trigger: GGCAGCTCGTTTGGAAGGCCATAAAGAAGGGATCGT...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAAATTGCTGTGCCCCCTaGTTGCATCTGGTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTINCCAP*LHLVFS Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACAGCAATT...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAATCAGGGAGAAGCCATaGCCAACCTTTGAATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIIREKP*PTFELP Trigger: TGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGAT...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | ACAGCACAATCTCCAGTTTTCCCACTATTTAAAGATTaGCCTTCCACAAGCATAATGAAACTGAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAQSPVFPLFKD*PSTSIMKLSSP Trigger: TGGGGAGCTCAGTTTCATTATGCTTGTGGAAGGCAAATCTTTAAATAGTGGGAAAACTGGAGATTGTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | AACATTAGGAAGCCTTTTCTAAAGAACCAGTGGTTCTaGGACTCGGTGCTGAAACAAACGCTCTTAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NIRKPFLKNQWF*DSVLKQTLLII Trigger: GATGATTAAGAGCGTTTGTTTCAGCACCGAGTCCAAGAACCACTGGTTCTTTAGAAAAGGCTTCCTAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAGCCTTCCAAACGAGCTaGCAATCTCTCTTTATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIAFQTS*QSLFIK Trigger: CTTGATAAAGAGAGATTGGCAGCTCGTTTGGAAGGC...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACACCCCCTGGTTGCATCTaGTCTTTTCTTCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTPPGCI*SFLLCI Trigger: AATACAGAGAAGAAAAGACCAGATGCAACCAGGGGG...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | CAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTaGTCAACTCACACCATCCTAGCAAAGGAATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QDLFFVQVGFYL*STHTILAKESN Trigger: GTTGGATTCCTTTGCTAGGATGGTGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| 3UTR CAA 72 bp | AAACAAACGCTCTTAATCATCCAAGAAGCCACACCTTaGTTCTCAGGGGCTACAAAACCTCAGAATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTLLIIQEATP*FSGATKPQNIY Trigger: GTAAATATTCTGAGGTTTTGTAGCCCCTGAGAACAAAGGTGTGGCTTCTTGGATGATTAAGAGCGTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGCTAATCTGCTCAGTCTaGACGATCCCTTCTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWLICSV*TIPSLW Trigger: CCATAAAGAAGGGATCGTGCAGACTGAGCAGATTAG...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR TCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGGTTACATCCCACTTTTaGACATTTGGATCTAGACGA | + |
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Preference number: 4 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWVTSHF*TFGSRR Trigger: TCGTCTAGATCCAAATGTTCAAAAGTGGGATGTAAC...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR GCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGCTCAAGTGGGATTTATaGTTTACCATGTATCTATCC | + |
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Preference number: 4 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWLKWDL*FTMYLS Trigger: GGATAGATACATGGTAAAGCATAAATCCCACTTGAG...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| 3UTR CAA 72 bp | AGAGTACCATTTCCCCATAGAAAGGGGCTTACTGACTaGAGATGTCACATTTATATTACAAATACTCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RVPFPHRKGLTD*RCHIYITNTQL Trigger: TAACTGAGTATTTGTAATATAAATGTGACATCTCAAGTCAGTAAGCCCCTTTCTATGGGGAAATGGTACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CCA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGTCATCATACTTGAGATaGAAGGCTTTAATTTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWSSYLR*KALIFA Trigger: TGCGAAAATTAAAGCCTTCCATCTCAAGTATGATGA...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | CATGGTTCAGAGTCTAAGTCAGTGGCCGAAGTGCTTGCCCTAGGATGGAGGTGGTGGCCAACCTTTGAATaGCCAAGCAGGACCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: HGSESKSVAEVLALGWRWWPTFE*PSRTLY Trigger: GTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCA...CCACCTCCATCCTAGGGCAAGCACTTCGGCCACTGACTTAGACTCTGAACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS GCA 90 bp | TCAACTGGTGATCCATCAGGGAGAAGCCATGGCCAACCTTTGAATTaGCAAGCAGGACCTTGTACAAAAACAGCCACAACTCGATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: STGDPSGRSHGQPLN*QAGPCTKTATTRSQ Trigger: CTGGGATCGAGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATCACCAGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS GCA 90 bp | CTGCTCAGTCTGCACGATCCCTTCTTTATGGCCTTCCAAACGAGCTaGCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LLSLHDPFFMAFQTS*QSLFIKAHTLFILN Trigger: ATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCAGCTCGTTTGGAAGGCCATAAAGAAGGGATCGTGCAGACTGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GATCTTGGAAAGACTCAAGAGTTTAGAGCCCCAGCTCCATACAGACCAAACAGATCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: DLGKTQEFRAPAPYRPNRSFFWM*YCRRTL Trigger: CAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...TCTGTTTGGTCTGTATGGAGCTGGGGCTCTAAACTCTTGAGTCTTTCCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATACCACGGGGGCTGCATTaGGAGCTGGCCGTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIPRGLH*ELAVVQ Trigger: CTGAACAACGGCCAGCTCCAAATGCAGCCCCCGTGG...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTCCTTCCGTTTCTTCTTaGCCTTTGAATCTTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSPSVSS*PLNLSW Trigger: CCAAGAAAGATTCAAAGGCAAAGAAGAAACGGAAGG...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CCA 90 bp | TCAGACAAAGACCTAATCTGCTCAGTCTGCACGATCCCTTCTTTATaGCCTTCCAAACGAGCTGCCAATCTCTCTTTATCAAGGCGCACA | + |
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Preference number: 5 (lower is better) Translates to: SDKDLICSVCTIPSL*PSKRAANLSLSRRT Trigger: TGTGCGCCTTGATAAAGAGAGATTGGCAGCTCGTTTGGAAGGCCATAAAGAAGGGATCGTGCAGACTGAGCAGATTAGGTCTTTGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GTGTACTTCCAGGACACCTTGGCAGCACAGTGTGGACATCAGCAGCTTTCCTCTCAATCCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VYFQDTLAAQCGHQQLSSQSVVS*LLLKLH Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGGATTG...AGAGGAAAGCTGCTGATGTCCACACTGTGCTGCCAAGGTGTCCTGGAAGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTCCCCATTGAGATATCCAAGTAGATCTTTTCGGTCGGGTCTTCTAACCAGCCAAAGAAGACAGTaGCAACACATGGCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: DASPLRYPSRSFRSGLLTSQRRQ*QHMAGS Trigger: AGAGCCTGCCATGTGTTGCAACTGTCTTCTTTGGCT...GGTTAGAAGACCCGACCGAAAAGATCTACTTGGATATCTCAATGGGGAAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| CDS TCA 90 bp | ATATGTCAACTGGTGATCCATCAGGGAGAAGCCATGGCCAACCTTTaGATTGCCAAGCAGGACCTTGTACAAAAACAGCCACAACTCGAT | + |
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Preference number: 5 (lower is better) Translates to: ICQLVIHQGEAMANL*IAKQDLVQKQPQLD Trigger: ATCGAGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATCACCAGTTGACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAGTAGTACTCTCTGGGTaGGCCTTCCTTTCCGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIVVLSG*AFLSGP Trigger: GGGACCGGAAAGGAAGGCCAACCCAGAGAGTACTAC...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATACTGGGCTGCAGGAGTTaGAGTCTTACGAGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: GPSFTGVKDCIIQKPLTILGCRS*SLTSRC Trigger: GCATCTGCTCGTAAGACTCAAACTCCTGCAGCCCAG...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATAAGCCATGGCCAACCTTaGAATTGCCAAGCAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: GPSFTGVKDCIIQKPLTISHGQP*NCQAGP Trigger: AGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCT...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGTTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWLVFTF*GQENSP Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | AATGTTCAAATGAAGCATTTGCCTAGACCTATCTTTTCCTTCAATGTTTTCTGGATCACTTCATCCCCCTaGACCACGATCTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NVQMKHLPRPIFSFNVFWITSSP*TTISFF Trigger: GAAGAAGGAGATCGTGGTCAAGGGGGATGAAGTGAT...CCAGAAAACATTGAAGGAAAAGATAGGTCTAGGCAAATGCTTCATTTGAACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | TTCTCCAGGATTTATTCTTTGTACAAGTTGGATTCTACCTGTTGTCAACTCACAGTTGATGCTTCCCCATaGAGATATCCAAGTAGATCT | + |
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Preference number: 5 (lower is better) Translates to: FSRIYSLYKLDSTCCQLTVDASP*RYPSRS Trigger: AGATCTACTTGGATATCTCAATGGGGAAGCATCAAC...TGTGAGTTGACAACAGGTAGAATCCAACTTGTACAAAGAATAAATCCTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGCTTTACTGGAGTTAAAGACTGTATAATCCAGAAGCCTTTGACTATACCCACTTTTGAACATTaGGATCTAGACGAACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GPSFTGVKDCIIQKPLTIPTFEH*DLDELH Trigger: ATGAAGTTCGTCTAGATCCAAATGTTCAAAAGTGGG...TATAGTCAAAGGCTTCTGGATTATACAGTCTTTAACTCCAGTAAAGCTAGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGTGTTTCATTTTCTCGTaGACAACCCTGTTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RCFQLLCVTSALCTLLVQCFIFS*TTLFLL Trigger: AAGAAGAAACAGGGTTGTCAACGAGAAAATGAAACA...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS-3UTR CAA 90 bp | AGATGTTTTCAGCTTCTGTGTGTGACCTCAGCTCTATGTACATTATTAGTTCAGCGAACTTCATCATACTaGAGATGGAAGGCTTTAATT | + |
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Preference number: 5 (lower is better) Translates to: RCFQLLCVTSALCTLLVQRTSSY*RWKALI Trigger: AATTAAAGCCTTCCATCTCAAGTATGATGAAGTTCG...CTGAACTAATAATGTACATAGAGCTGAGGTCACACACAGAAGCTGAAAACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CCA 72 bp | ACGCAATGTAGGATCCACGGGGGCTGCATTTGGAGCTaGCCGTTGTTCAGGGGCACGACCTTCTTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TQCRIHGGCIWS*PLFRGTTFFSG Trigger: GCCAGAGAAGAAGGTCGTGCCCCTGAACAACGGCCAGCTCCAAATGCAGCCCCCGTGGATCCTACATTGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS GCA 72 bp | CTAAGAACAAAAAGCGACTCGGTGGCCGGCAGATGCTaGGATCGATCGCTGTCCTTCTACACCTCCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRTKSDSVAGRC*DRSLSFYTSVQ Trigger: CTGGACGGAGGTGTAGAAGGACAGCGATCGATCGCAGCATCTGCCGGCCACCGAGTCGCTTTTTGTTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| CDS GCA 72 bp | TCTGGCTTGAGACACTGGTCTAGGTACAGGCTGGGCTaGAGGAGTTTGAGTCTTACGAGCAGATGCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGLRHWSRYRLG*RSLSLTSRCTF Trigger: GAAGGTGCATCTGCTCGTAAGACTCAAACTCCTGCAGCCCAGCCTGTACCTAGACCAGTGTCTCAAGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CCA 72 bp | ATCACTTCATCCCCCTTGACCACGATCTCCTTCTTCTaGATGTTGTACTGTCGCAGGACGCTGAGCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: ITSSPLTTISFF*MLYCRRTLSTS Trigger: GGACGTGCTCAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGAGATCGTGGTCAAGGGGGATGAAGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CCA 72 bp | GTTGGCCTTCCTTTCCGGTCCCCCAAACTACATAGTTaGTCTTCACATTCTTGGGCCAGGAGAACTCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VGLPFRSPKLHS*SSHSWARRTPR Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAACTATGTAGTTTGGGGGACCGGAAAGGAAGGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS TCA 72 bp | GACACTGGTCTAGGTACAGGCTGGGCTGCAGGAGTTTaGGTCTTACGAGCAGATGCACCTTCCGTTACAGAT | + |
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Preference number: 6 (lower is better) Translates to: DTGLGTGWAAGV*VLRADAPSVTD Trigger: ATCTGTAACGGAAGGTGCATCTGCTCGTAAGACTCAAACTCCTGCAGCCCAGCCTGTACCTAGACCAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS TCA 72 bp | CTGGTGATCCATCAGGGAGAAGCCATGGCCAACCTTTaGATTGCCAAGCAGGACCTTGTACAAAAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVIHQGEAMANL*IAKQDLVQKQP Trigger: TGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATCACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS GCA 72 bp | CTGCACGATCCCTTCTTTATGGCCTTCCAAACGAGCTaGCAATCTCTCTTTATCAAGGCGCACACACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHDPFFMAFQTS*QSLFIKAHTLF Trigger: GAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCAGCTCGTTTGGAAGGCCATAAAGAAGGGATCGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CAA 72 bp | ACTGGTGATCCATCAGGGAGAAGCCATGGCCAACCTTaGAATTGCCAAGCAGGACCTTGTACAAAAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGDPSGRSHGQP*NCQAGPCTKTA Trigger: GGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATCACCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CAA 72 bp | AAATTGCCGAGGCGCTCGAGGAGCCAAAGAAGACAGTaGCAACACATGGCAGGCTCTGGGAGATTACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KLPRRSRSQRRQ*QHMAGSGRLQK Trigger: TTTTTGTAATCTCCCAGAGCCTGCCATGTGTTGCAACTGTCTTCTTTGGCTCCTCGAGCGCCTCGGCAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159794.2 |
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| CDS CAA 90 bp | ATCAGGGAGAAGCCATGGCCAACCTTTGAATTGCCAAGCAGGACCTaGTACAAAAACAGCCACAACTCGATCCCAGTCTTGAGGCATAAG | + |
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Preference number: 6 (lower is better) Translates to: IREKPWPTFELPSRT*YKNSHNSIPVLRHK Trigger: CTTATGCCTCAAGACTGGGATCGAGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS GCA 72 bp | GATCCATCAGGGAGAAGCCATGGCCAACCTTTGAATTaGCAAGCAGGACCTTGTACAAAAACAGCCACAACT | + |
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Preference number: 6 (lower is better) Translates to: DPSGRSHGQPLN*QAGPCTKTATT Trigger: AGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CAA 72 bp | AAGCCATGGCCAACCTTTGAATTGCCAAGCAGGACCTaGTACAAAAACAGCCACAACTCGATCCCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KPWPTFELPSRT*YKNSHNSIPVL Trigger: CAAGACTGGGATCGAGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CAA 90 bp | AATATGTCAACTGGTGATCCATCAGGGAGAAGCCATGGCCAACCTTaGAATTGCCAAGCAGGACCTTGTACAAAAACAGCCACAACTCGA | + |
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Preference number: 6 (lower is better) Translates to: NMSTGDPSGRSHGQP*NCQAGPCTKTATTR Trigger: TCGAGTTGTGGCTGTTTTTGTACAAGGTCCTGCTTGGCAATTCAAAGGTTGGCCATGGCTTCTCCCTGATGGATCACCAGTTGACATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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| CDS CCA 72 bp | GACCTAATCTGCTCAGTCTGCACGATCCCTTCTTTATaGCCTTCCAAACGAGCTGCCAATCTCTCTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: DLICSVCTIPSL*PSKRAANLSLS Trigger: TGATAAAGAGAGATTGGCAGCTCGTTTGGAAGGCCATAAAGAAGGGATCGTGCAGACTGAGCAGATTAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018337.9 |
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