Pregenerated sensors for CDC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029283Ensembl transcript IDs: ENSMUST00000031221.12, ENSMUST00000076467.13, ENSMUST00000117196.9, ENSMUST00000118261.8, ENSMUST00000129938.8
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCTGGTCAGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGCAACCTGCTGCCGCCTCGACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GLVRTLCQDLWRSES*CACPRGNLLPPRQA Trigger: TGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCTGACCAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR TCA 90 bp | GGCAACCTGCTGCCGCCTCGACAGGCAAACGCTGCAGACTCTATCTaGTCCATAGCAGTCGCAGGTGAGGACAGCAGGGCAGGACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GNLLPPRQANAADSI*SIAVAGEDSRAGPG Trigger: GCCAGGTCCTGCCCTGCTGTCCTCACCTGCGACTGCTATGGATCAGATAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 90 bp | AGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTGCCGCCTCGACAGGCAAACGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: RTLCQDLWRSESWCA*PRGNLLPPRQANAA Trigger: TGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 90 bp | ACCTCTGGCGCTCTGAATCCTGGTGTGCCTGCCCTAGGGGCAACCTaGTGCCGCCTCGACAGGCAAACGCTGCAGACTCTATCTGATCCA | + |
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Preference number: 1 (lower is better) Translates to: TSGALNPGVPALGAT*CRLDRQTLQTLSDP Trigger: TGGATCAGATAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR TCA 90 bp | ACAGGCAAACGCTGCAGACTCTATCTGATCCATAGCAGTCGCAGGTaGGGACAGCAGGGCAGGACCTGGCAGTTTCCCTCATCACGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TGKRCRLYLIHSSRR*GQQGRTWQFPSSRC Trigger: ACAGCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTGTCCTCACCTGCGACTGCTATGGATCAGATAGAGTCTGCAGCGTTTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR TCA 90 bp | CCATCGTTGTCCCTTTTATACAAGGAGTCCTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGATGCTTTGTGGTCAGTGTTCTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: PSLSLLYKESSECCA*AACTRDALWSVFLE Trigger: TTCCAAGAACACTGACCACAAAGCATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTATAAAAGGGACAACGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR TCA 90 bp | ATGACTCCAATAGCCATCGTTGTCCCTTTTATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGCCTGTACACGGGATGCTTTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: MTPIAIVVPFIQGVL*VLCLSSLYTGCFVV Trigger: GACCACAAAGCATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTATAAAAGGGACAACGATGGCTATTGGAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 90 bp | GTAAAATGGGTACCGCCCACTGAGCAAGGACAGGAATATGACACCTaGAGACCACATGTCAATCGCTGTGGTCTGGTCAGGACACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: VKWVPPTEQGQEYDT*RPHVNRCGLVRTLC Trigger: ACAAAGTGTCCTGACCAGACCACAGCGATTGACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTCAGTGGGCGGTACCCATTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 90 bp | CATAGGCTTCATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTaGAGTCTTTGGGATGACTCCAATAGCCATCGTTGTCCCTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: HRLHQVLSPSLLSWK*SLWDDSNSHRCPFY Trigger: ATAAAAGGGACAACGATGGCTATTGGAGTCATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATGAAGCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR CCA 90 bp | GTGATGATACAAGCAGGAACTCCTCAGCAAGTCCATCCTGACTCCTaGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: VMIQAGTPQQVHPDS*KPGMLSRTERSLEQ Trigger: TTGTTCTAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGACTTGCTGAGGAGTTCCTGCTTGTATCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR CCA 90 bp | CATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTGCAGTCTTTaGGATGACTCCAATAGCCATCGTTGTCCCTTTTATACAAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: HQVLSPSLLSWKCSL*DDSNSHRCPFYTRS Trigger: ACTCCTTGTATAAAAGGGACAACGATGGCTATTGGAGTCATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 90 bp | GTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTaGACACTTTCCACACACACCACCAACAGCCAGTTCCCCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: VLGGDKHLCNNYLFI*TLSTHTTNSQFPHA Trigger: TGCATGGGGGAACTGGCTGTTGGTGGTGTGTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR TCA 90 bp | AAATATACATTATATACACATGGCAAATTGATCAATGAGACACACTaGTCTATCCATGTTCACAACAGTAAACACTCTGAGAGACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: KYTLYTHGKLINETH*SIHVHNSKHSERQL Trigger: GAGCTGTCTCTCAGAGTGTTTACTGTTGTGAACATGGATAGATCAGTGTGTCTCATTGATCAATTTGCCATGTGTATATAATGTATATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTAGGGGCAACCTGCTGCCGCCTCGACAGGCAAACGCTGCAGACTCTATCTCAGCAGGGCAGGACCTaGCAGTTTCCCTCATCACGC | + |
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Preference number: 2 (lower is better) Translates to: ALGATCCRLDRQTLQTLSQQGRT*QFPSSR Trigger: GCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTG...AGATAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACCGCCCACTGAGCAAGGACAGGAATATGACACCTGCAGACCACATGTCTGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WVPPTEQGQEYDTCRPHVWRSES*CACPRG Trigger: GCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCA...GACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTCAGTGGGCGGTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTGGTGTGCCTGCCCTAGGCTACTGACTGTGTGTTaGAACTGTGAGGTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RTLCQDLWRSESWCACPRLLTVC*NCEVLG Trigger: TCCCAGGACCTCACAGTTCCAACACACAGTCAGTAG...CCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGGCTTCATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTGCAGTCTTGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HRLHQVLSPSLLSWKCSLESWCA*PRGNLL Trigger: CAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTC...AAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATGAAGCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGGCTTCATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTGCAGTCTTTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGAT | + |
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Preference number: 2 (lower is better) Translates to: HRLHQVLSPSLLSWKCSLSECCA*AACTRD Trigger: ATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGA...AAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATGAAGCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGGTAGAGTCTAGACCCCGCAGTCTCTCACAGAGAGCTCTCAAGTCTTGTGCAAGGACAGGAATATaGCACCTGCAGACCACATGT | + |
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Preference number: 2 (lower is better) Translates to: GVVESRPRSLSQRALKSCARTGI*HLQTTC Trigger: ACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGC...ACAAGACTTGAGAGCTCTCTGTGAGAGACTGCGGGGTCTAGACTCTACCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGTCTAGACCCCGCAGTCTCTCACAGAGAGCTCTCAAGTCTTGTGCTGGGTATGTCCACAGTCTTTaGTTGCTTGATGAGACTGCC | + |
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Preference number: 2 (lower is better) Translates to: VESRPRSLSQRALKSCAGYVHSL*LLDETA Trigger: GGCAGTCTCATCAAGCAATCAAAGACTGTGGACATA...CCCAGCACAAGACTTGAGAGCTCTCTGTGAGAGACTGCGGGGTCTAGACTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR CAA 90 bp | CGCAGTCTCTCACAGAGAGCTCTCAAGTCTTGTGCTGGGACTTCTTaGCTACACAGAACTGATTTGCCAAAAGCTTTAGCAGCCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: RSLSQRALKSCAGTS*LHRTDLPKALAAWI Trigger: TATCCAGGCTGCTAAAGCTTTTGGCAAATCAGTTCTGTGTAGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTCTGTGAGAGACTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGCAGGACCTGGCAGTTTCCCTCATCACGCTGTTCATAGCTTTTGTAGATCCACAGTCTTTGATTaGTTGATGAGACTGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: SRAGPGSFPHHAVHSFCRSTVFD*LMRLPT Trigger: TGTAGGCAGTCTCATCAAGCAATCAAAGACTGTGGA...TCTACAAAAGCTATGAACAGCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCAAAATGTGGATGCTCCTaGCAAACCAGAAAACATCGC | + |
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Preference number: 2 (lower is better) Translates to: TLRDSSLVCDDTSRNSSAKCGCS*QTRKHR Trigger: GCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTT...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGGCTTCATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTGCAGTCTTCGAATTGTCATGATCTaGGCCAAAGCAGTTAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: HRLHQVLSPSLLSWKCSLRIVMI*AKAVKS Trigger: TGACTTAACTGCTTTGGCTCAGATCATGACAATTCG...AAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATGAAGCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCAATGCAGAAATGTGGATaGTCCTGGCAAACCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TLRDSSLVCDDTSRNSSAMQKCG*SWQTRK Trigger: TTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCAT...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTAATGCAGAAATGTGGATaGTCCTGGCAAACCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VHPDSWKPGMLSRTERSLMQKCG*SWQTRK Trigger: TTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCAT...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCAGTTTCTCCCTGTCATACCTGTTAGCTTTATGACCTGTACCTCGAACGACACAAACAACCTGTaGTTATCCACATCGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: FSQFLPVIPVSFMTCTSNDTNNL*LSTSPY Trigger: GTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTC...GTTCGAGGTACAGGTCATAAAGCTAACAGGTATGACAGGGAGAAACTGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR TCA 90 bp | GAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTGCATCTGAGTCTACTTaGTGGTTTAACTCAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: EQKCRNVDAPGKPENIASASEST*WFNSKT Trigger: GGTCTTTGAGTTAAACCATCAAGTAGACTCAGATGC...ACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCAAATTCAGAACAGAAATaGAGAAATGTGGATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TLRDSSLVCDDTSRNSSANSEQK*RNVDAP Trigger: AGGAGCATCCACATTTCTGCATTTCTGTTCTGAATT...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR CCA 90 bp | ATATCTTTAAAGAACGCATGTAATAAGGCTGCTTCTGCTGTTATCCTTGAAGCTTGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: ISLKNACNKAASAVILEACGQCS*KQQGHR Trigger: CCTATGACCCTGCTGCTTCCAAGAACACTGACCACA...AGCTTCAAGGATAACAGCAGAAGCAGCCTTATTACATGCGTTCTTTAAAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACGACACAAACAACCTGTaGTTATCCACATCGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: EVTNISAITICSFAHFPHDTNNL*LSTSPY Trigger: GTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTC...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR TCA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGGCATCTGAGTCTACTTaGTGGTTTAACTCAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRASEST*WFNSKT Trigger: GGTCTTTGAGTTAAACCATCAAGTAGACTCAGATGC...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGAACTATTTGTTCATTTaGACACTTTCCACACACACC | + |
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Preference number: 2 (lower is better) Translates to: RNAEMWMLLANQKTSPVMNYLFI*TLSTHT Trigger: GGTGTGTGTGGAAAGTGTGCAAATGAACAAATAGTT...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCGACACAAACAACCTGTaGTTATCCACATCGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LGGDKHLCNNYLFICTLSDTNNL*LSTSPY Trigger: GTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTC...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAAGTTTAGAACAAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTAATGCAGAAATGTGGATaGTCCTGGCAAACCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ERSLEQNNAQISVSSPLLMQKCG*SWQTRK Trigger: TTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCAT...TAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTTGTTCTAAACTTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCAATTCAGAACAGAAATaGAGAAATGTGGATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPNSEQK*RNVDAP Trigger: AGGAGCATCCACATTTCTGCATTTCTGTTCTGAATT...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGAACTATTTGTTCATTTaGACACTTTCCACACACACC | + |
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Preference number: 2 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRNYLFI*TLSTHT Trigger: GGTGTGTGTGGAAAGTGTGCAAATGAACAAATAGTT...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| 3UTR GCA 72 bp | TGTCAGGACCTCTGGCGCTCTGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTGCCGCCTCGACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CQDLWRSESWCA*PRGNLLPPRQA Trigger: TGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 72 bp | GCTCTGAATCCTGGTGTGCCTGCCCTAGGGGCAACCTaGTGCCGCCTCGACAGGCAAACGCTGCAGACTCTA | + |
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Preference number: 3 (lower is better) Translates to: ALNPGVPALGAT*CRLDRQTLQTL Trigger: TAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR CCA 72 bp | AGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGCAACCTGCTGCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: RTLCQDLWRSES*CACPRGNLLPP Trigger: AGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 72 bp | CTGAATCCTGGTGTGCCTGCCCTAGGGGCAACCTGCTaGCGCCTCGACAGGCAAACGCTGCAGACTCTATCT | + |
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Preference number: 3 (lower is better) Translates to: LNPGVPALGATC*RLDRQTLQTLS Trigger: AGATAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR TCA 72 bp | CGCTGCAGACTCTATCTGATCCATAGCAGTCGCAGGTaGGGACAGCAGGGCAGGACCTGGCAGTTTCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RCRLYLIHSSRR*GQQGRTWQFPS Trigger: TGAGGGAAACTGCCAGGTCCTGCCCTGCTGTCCTCACCTGCGACTGCTATGGATCAGATAGAGTCTGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR GCA 72 bp | GTACCGCCCACTGAGCAAGGACAGGAATATGACACCTaGAGACCACATGTCAATCGCTGTGGTCTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VPPTEQGQEYDT*RPHVNRCGLVR Trigger: CCTGACCAGACCACAGCGATTGACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTCAGTGGGCGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| 3UTR CCA 72 bp | ATGACACCTGCAGACCACATGTCAATCGCTGTGGTCTaGTCAGGACACTTTGTCAGGACCTCTGGCGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MTPADHMSIAVV*SGHFVRTSGAL Trigger: CAGAGCGCCAGAGGTCCTGACAAAGTGTCCTGACCAGACCACAGCGATTGACATGTGGTCTGCAGGTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR CCA 72 bp | CAGCCTGTACACGGGATGCTTTGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGGAAGCATTCCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QPVHGMLCGQCS*KQQGHRKHSLE Trigger: CTCCAGGGAATGCTTCCTATGACCCTGCTGCTTCCAAGAACACTGACCACAAAGCATCCCGTGTACAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR TCA 72 bp | TCCCTTTTATACAAGGAGTCCTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGATGCTTTGTGGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLYKESSECCA*AACTRDALWSV Trigger: CACTGACCACAAAGCATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTATAAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR TCA 72 bp | ATAGCCATCGTTGTCCCTTTTATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGCCTGTACACGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: IAIVVPFIQGVL*VLCLSSLYTGC Trigger: GCATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTATAAAAGGGACAACGATGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR CCA 72 bp | CAAGCAGGAACTCCTCAGCAAGTCCATCCTGACTCCTaGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QAGTPQQVHPDS*KPGMLSRTERS Trigger: ACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGACTTGCTGAGGAGTTCCTGCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| 3UTR GCA 72 bp | CATCAGGTACTGAGTCCCAGCCTTCTGAGTTGGAAGTaGAGTCTTTGGGATGACTCCAATAGCCATCGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQVLSPSLLSWK*SLWDDSNSHRC Trigger: ACAACGATGGCTATTGGAGTCATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR CCA 72 bp | AGGCTTCATCAGGTACTGAGTCCCAGCCTTCTGAGTTaGAAGTGCAGTCTTTGGGATGACTCCAATAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RLHQVLSPSLLS*KCSLWDDSNSH Trigger: ATGGCTATTGGAGTCATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAGTACCTGATGAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR CCA 72 bp | CTGAGTCCCAGCCTTCTGAGTTGGAAGTGCAGTCTTTaGGATGACTCCAATAGCCATCGTTGTCCCTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LSPSLLSWKCSL*DDSNSHRCPFY Trigger: ATAAAAGGGACAACGATGGCTATTGGAGTCATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR TCA 72 bp | TCTCTCAGTTTCTCCCTGTCATACCTGTTAGCTTTATaGCCTGTACCTCGAACCCATGCATCAGGCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLSFSLSYLLAL*PVPRTHASGSV Trigger: TACTGAGCCTGATGCATGGGTTCGAGGTACAGGTCATAAAGCTAACAGGTATGACAGGGAGAAACTGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| 3UTR GCA 72 bp | GCTAGCTTTCGTGATATTATGTCCACAGTCTTTGATTaGTTGATGAGACTGCCTACACCAGTCTGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASFRDIMSTVFD*LMRLPTPVCCH Trigger: GTGACAGCAGACTGGTGTAGGCAGTCTCATCAAGCAATCAAAGACTGTGGACATAATATCACGAAAGCTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR CCA 72 bp | CTACACAGAACTGATTTGCCAAAAGCTTTAGCAGCCTaGATAGTTTCCCTGGATCCTCGAATTGTCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: LHRTDLPKALAA*IVSLDPRIVMI Trigger: GATCATGACAATTCGAGGATCCAGGGAAACTATCCAGGCTGCTAAAGCTTTTGGCAAATCAGTTCTGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTTTAAAGAACGCATGTAATAAGGCTGCTTCTGCTGTTATCCTTGAAGCTGAGAGCTCTCAAGTCTaGTGCTGGGACTTCTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISLKNACNKAASAVILEAESSQV*CWDFFA Trigger: AGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTC...AGCTTCAAGGATAACAGCAGAAGCAGCCTTATTACATGCGTTCTTTAAAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| 3UTR TCA 72 bp | TTATATACACATGGCAAATTGATCAATGAGACACACTaGTCTATCCATGTTCACAACAGTAAACACTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LYTHGKLINETH*SIHVHNSKHSE Trigger: CTCAGAGTGTTTACTGTTGTGAACATGGATAGATCAGTGTGTCTCATTGATCAATTTGCCATGTGTATATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| 3UTR TCA 72 bp | TTATCTTTTTCTCAATTACCTAAGACCCATTCCCTCTaGCCAAGATTAATTCAGAACAGAAATGCAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSFSQLPKTHSL*PRLIQNRNAEM Trigger: CATTTCTGCATTTCTGTTCTGAATTAATCTTGGTCAGAGGGAATGGGTCTTAGGTAATTGAGAAAAAGATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACACACACCACCAACAGCCAGTTCCCCCATGCACACAGTGCAGACCACACACTGCAGCAGGGCAGGACCTaGCAGTTTCCCTCATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: THTTNSQFPHAHSADHTLQQGRT*QFPSSR Trigger: GCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTG...CAGTGTGTGGTCTGCACTGTGTGCATGGGGGAACTGGCTGTTGGTGGTGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGTGGTCTGGTCAGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTGGCCCATGACATTGTCTTaGCCCCCTGCAACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCGLVRTLCQDLWRSESWPMTLS*PPATVR Trigger: TCTGACAGTTGCAGGGGGGCAAGACAATGTCATGGG...CCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCTGACCAGACCACAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGGGGCAACCTGCTGCCGCCTCGACAGGCAAACGCTGCAGACTCTATCTTCTTCATGTCCTTCTTaGAACTGTGCTGTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGATCCRLDRQTLQTLSSSCPS*NCAVAK Trigger: TTTGGCCACAGCACAGTTGCAAGAAGGACATGAAGA...AGATAGAGTCTGCAGCGTTTGCCTGTCGAGGCGGCAGCAGGTTGCCCCTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTATGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPDSWKPGMLSRTERSLWRSES*CACPRG Trigger: GCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCA...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTATGGAGGACCACTGGCTaGCCTGGGAGTGGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHPDSWKPGMLSRTERSLWRTTG*PGSGRV Trigger: GACTCTACCACTCCCAGGTCAGCCAGTGGTCCTCCA...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGTGGTCTGGTCAGGACACTTTGTCAGGACCTCTGGCGCTCTGAATCCTGGCAGACACTGAAGCTCTaGTGCAATCCTCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCGLVRTLCQDLWRSESWQTLKL*CNPHRM Trigger: CATCCTATGAGGATTGCAGCAGAGCTTCAGTGTCTG...CCAGGATTCAGAGCGCCAGAGGTCCTGACAAAGTGTCCTGACCAGACCACAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CCA 90 bp | ACACACACCACCAACAGCCAGTTCCCCCATGCACACAGTGCAGACCACACACTGCCCAGCCTTCTGAGTTaGAAGTGCAGTCTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: THTTNSQFPHAHSADHTLPSLLS*KCSLWD Trigger: ATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGG...CAGTGTGTGGTCTGCACTGTGTGCATGGGGGAACTGGCTGTTGGTGGTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTTGGAGGACCACTGGCTaGCCTGGGAGTGGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EQKCRNVDAPGKPENIASWRTTG*PGSGRV Trigger: GACTCTACCACTCCCAGGTCAGCCAGTGGTCCTCCA...ACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AGAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTGGAGGACCACTGGCTaGCCTGGGAGTGGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEMQKCGCSWQTRKHRQWRTTG*PGSGRV Trigger: GACTCTACCACTCCCAGGTCAGCCAGTGGTCCTCCA...CTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGAAAACATCGCCAGTAATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQKTSPVMSSSMLTFPVAESWCA*PRGNLL Trigger: CAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTC...GGCCACAGGAAAAGTGAGCATAGAACTGGACATTACTGGCGATGTTTTCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSESWCA*PRGNLL Trigger: CAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTC...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTGGAGGACCACTGGCTaGCCTGGGAGTGGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMWRTTG*PGSGRV Trigger: GACTCTACCACTCCCAGGTCAGCCAGTGGTCCTCCA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQKCRNVDAPGKPENIASSECCA*AACTRD Trigger: ATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGA...ACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCACCCATGACATTGTCTTaGCCCCCTGCAACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRDSSLVCDDTSRNSSAPMTLS*PPATVR Trigger: TCTGACAGTTGCAGGGGGGCAAGACAATGTCATGGG...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTACCCATGACATTGTCTTaGCCCCCTGCAACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHPDSWKPGMLSRTERSLPMTLS*PPATVR Trigger: TCTGACAGTTGCAGGGGGGCAAGACAATGTCATGGG...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGCAGCAGGGCAGGACCTaGCAGTTTCCCTCATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMQQGRT*QFPSSR Trigger: GCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTG...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCACAACAGTAAACACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACATGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MFTTVNTLRDSSLVCDDTWRSES*CACPRG Trigger: GCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCA...TGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGTGTTTACTGTTGTGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSIQGVL*VLCLSS Trigger: GCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTAT...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGCAGCAGGGCAGGACCTaGCAGTTTCCCTCATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKQQGRT*QFPSSR Trigger: GCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTG...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AATGGGTACCGCCCACTGAGCAAGGACAGGAATATGACACCTGCAGACCACATGCCAAATAAACAGAGCTaGAGGTGCCTTCTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NGYRPLSKDRNMTPADHMPNKQS*RCLLQF Trigger: AAATTGGAGAAGGCACCTTCAGCTCTGTTTATTTGG...CATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTCAGTGGGCGGTACCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGACAGGAATATGACACCTGCAGACCACATGTCAATCGCTGTGGTCTGTGCAGGGCTCTCATGTaGAATGGAGCTGTGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: EQGQEYDTCRPHVNRCGLCRALM*NGAVYI Trigger: AATATACACAGCTCCATTTCACATGAGAGCCCTGCA...CAGACCACAGCGATTGACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR TCA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPSECCA*AACTRD Trigger: ATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGA...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRESWCA*PRGNLL Trigger: CAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTC...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCACCAAAAACAGAGCGCTaGACAGAAAGGCCTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRDSSLVCDDTSRNSSAPKTER*TERPTD Trigger: ATCTGTAGGCCTTTCTGTCCAGCGCTCTGTTTTTGG...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIMHKSPYRALYYFVPLSSECCA*AACTRD Trigger: ATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGA...AGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPIQGVL*VLCLSS Trigger: GCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTAT...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGACAGGAATATGACACCTGCAGACCACATGTCAATCGCTGTGGTCTGTCCTTCTTGCAACTGTaGTGTGGCCAAATAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQGQEYDTCRPHVNRCGLSFLQL*CGQINR Trigger: TCTGTTTATTTGGCCACAGCACAGTTGCAAGAAGGA...CAGACCACAGCGATTGACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCAAGCTCTCAAGTCTTGTaGTGGGACTTCTTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TLRDSSLVCDDTSRNSSASSQVL*WDFFAT Trigger: TGTAGCAAAGAAGTCCCAGCACAAGACTTGAGAGCT...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACACACACCACCAACAGCCAGTTCCCCCATGCACACAGTGCAGACCACACACTGTATTCCCGAACTTCTTaGAAGGAAAGAGAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: THTTNSQFPHAHSADHTLYSRTS*KEREFK Trigger: TTTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATA...CAGTGTGTGGTCTGCACTGTGTGCATGGGGGAACTGGCTGTTGGTGGTGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAGTTTAGAACAAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACAGCAGGGCAGGACCTaGCAGTTTCCCTCATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ERSLEQNNAQISVSSPLLQQGRT*QFPSSR Trigger: GCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTG...TAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTTGTTCTAAACTTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCTGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFWRSES*CACPRG Trigger: GCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCA...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCTGGCGCTCTGAATCCTaGTGTGCCTGCCCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSWRSES*CACPRG Trigger: GCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCA...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCATCTCAAGTCTTGTGCTaGGACTTCTTTGCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLRDSSLVCDDTSRNSSASQVLC*DFFATQ Trigger: CTGTGTAGCAAAGAAGTCCCAGCACAAGACTTGAGA...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCCCCAGCCTTCTGAGTTaGAAGTGCAGTCTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSPSLLS*KCSLWD Trigger: ATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGG...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCATGACACCTGTGGTCTaGTCAGGACACTTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSMTPVV*SGHFVR Trigger: CCTGACAAAGTGTCCTGACCAGACCACAGGTGTCAT...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076467.13 |
||
| CDS-3UTR TCA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTACGAATTGTCATGATCTaGGCCAAAGCAGTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHPDSWKPGMLSRTERSLRIVMI*AKAVKS Trigger: TGACTTAACTGCTTTGGCTCAGATCATGACAATTCG...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRIQGVL*VLCLSS Trigger: GCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTAT...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCACAGACACTGAAGCTCTaGTGCAATCCTCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRHKQPVIIHIALQHTAAQTLKL*CNPHRM Trigger: CATCCTATGAGGATTGCAGCAGAGCTTCAGTGTCTG...TGCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCGAATCCTGGTGTGCCTaGCCTAGGGGCAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSESWCA*PRGNLL Trigger: CAGCAGGTTGCCCCTAGGGCAGGCACACCAGGATTC...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGCCAAAAACAGAGCGCTaGACAGAAAGGCCTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTEMQKCGCSWQTRKHRQPKTER*TERPTD Trigger: ATCTGTAGGCCTTTCTGTCCAGCGCTCTGTTTTTGG...CTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| 3UTR CAA 72 bp | AGAACGCATGTAATAAGGCTGCTTCTGCTGTTATCCTaGAAGCTGGGTTTAGGTCCAGAAGCTTGTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTHVIRLLLLLS*KLGLGPEACRA Trigger: TGCTCGACAAGCTTCTGGACCTAAACCCAGCTTCAAGGATAACAGCAGAAGCAGCCTTATTACATGCGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR TCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGGCAAGGACAGGAATATaGCACCTGCAGACCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKARTGI*HLQTTC Trigger: ACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGC...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031221.12 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR TCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCTCTGAGTGCTGTGCCTaGGCAGCCTGTACACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSSECCA*AACTRD Trigger: ATCCCGTGTACAGGCTGCTCAGGCACAGCACTCAGA...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAGCAGCCTGGATAGTTTCCCTGGATCCTCGAATTGTCATGATCTGAGCAGTCTAGCCTTGTTCTaGAATGTTCTTTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSSLDSFPGSSNCHDLSSLALF*NVLSLQ Trigger: CTGCAGAGAAAGAACATTTCAGAACAAGGCTAGACT...GCTCAGATCATGACAATTCGAGGATCCAGGGAAACTATCCAGGCTGCTAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCATCTTCATGTCCTTCTTaGAACTGTGCTGTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRHKQPVIIHIALQHTAASSCPS*NCAVAK Trigger: TTTGGCCACAGCACAGTTGCAAGAAGGACATGAAGA...TGCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTCCCATGACATTGTCTTaGCCCCCTGCAACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIMHKSPYRALYYFVPLSPMTLS*PPATVR Trigger: TCTGACAGTTGCAGGGGGGCAAGACAATGTCATGGG...AGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTTCTCAAGTCTTGTGCTaGGACTTCTTTGCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EQKCRNVDAPGKPENIASSQVLC*DFFATQ Trigger: CTGTGTAGCAAAGAAGTCCCAGCACAAGACTTGAGA...ACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCTGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPCGQCS*KQQGHR Trigger: CCTATGACCCTGCTGCTTCCAAGAACACTGACCACA...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CCA 90 bp | ATGTTCACAACAGTAAACACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACATGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: MFTTVNTLRDSSLVCDDTCGQCS*KQQGHR Trigger: CCTATGACCCTGCTGCTTCCAAGAACACTGACCACA...TGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGTGTTTACTGTTGTGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCTGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPCGQCS*KQQGHR Trigger: CCTATGACCCTGCTGCTTCCAAGAACACTGACCACA...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCCCCAGCCTTCTGAGTTaGAAGTGCAGTCTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPPSLLS*KCSLWD Trigger: ATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGG...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCCCAAATAAACAGAGCTaGAGGTGCCTTCTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSPNKQS*RCLLQF Trigger: AAATTGGAGAAGGCACCTTCAGCTCTGTTTATTTGG...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR TCA 90 bp | AACCAGAAAACATCGCCAGTAATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCCCAAATAAACAGAGCTaGAGGTGCCTTCTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NQKTSPVMSSSMLTFPVAPNKQS*RCLLQF Trigger: AAATTGGAGAAGGCACCTTCAGCTCTGTTTATTTGG...GGCCACAGGAAAAGTGAGCATAGAACTGGACATTACTGGCGATGTTTTCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR TCA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATACAAGGAGTCCTCTaGGTGCTGTGCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFIQGVL*VLCLSS Trigger: GCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTAT...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR GCA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCTCCTTCTTGCAACTGTaGTGTGGCCAAATAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSSFLQL*CGQINR Trigger: TCTGTTTATTTGGCCACAGCACAGTTGCAAGAAGGA...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR GCA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCCAGACACTGAAGCTCTaGTGCAATCCTCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPQTLKL*CNPHRM Trigger: CATCCTATGAGGATTGCAGCAGAGCTTCAGTGTCTG...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGAGCTCTCAAGTCTTGTaGTGGGACTTCTTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMSSQVL*WDFFAT Trigger: TGTAGCAAAGAAGTCCCAGCACAAGACTTGAGAGCT...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAGTTTCTCCCTGTCATACCTGTTAGCTTTATGACCTGTACCTCGAACCAGACTGGACAAACTTaGGCAGCTCTATTTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSQFLPVIPVSFMTCTSNQTGQT*AALFLC Trigger: ACACAAAAATAGAGCTGCTCAAGTTTGTCCAGTCTG...GTTCGAGGTACAGGTCATAAAGCTAACAGGTATGACAGGGAGAAACTGAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGAAAACATCGCCAGTAATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCTATGTCCACAGTCTTTaGTTGCTTGATGAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQKTSPVMSSSMLTFPVAYVHSL*LLDEFL Trigger: GAGAAACTCATCAAGCAATCAAAGACTGTGGACATA...GGCCACAGGAAAAGTGAGCATAGAACTGGACATTACTGGCGATGTTTTCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAGTTTAGAACAAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTAGCAAGGACAGGAATATaGCACCTGCAGACCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: ERSLEQNNAQISVSSPLLARTGI*HLQTTC Trigger: ACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGC...TAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTTGTTCTAAACTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031221.12 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTATGTCCACAGTCTTTaGTTGCTTGATGAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMYVHSL*LLDELS Trigger: GGAAAGCTCATCAAGCAATCAAAGACTGTGGACATA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076467.13 ENSMUST00000117196.9 |
||
| CDS-3UTR GCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTCCTTCTTGCAACTGTaGTGTGGCCAAATAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMSFLQL*CGQINR Trigger: TCTGTTTATTTGGCCACAGCACAGTTGCAAGAAGGA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCTCTTCATGTCCTTCTTaGAACTGTGCTGTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPSSCPS*NCAVAK Trigger: TTTGGCCACAGCACAGTTGCAAGAAGGACATGAAGA...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTCAGACACTGAAGCTCTaGTGCAATCCTCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KIMHKSPYRALYYFVPLSQTLKL*CNPHRM Trigger: CATCCTATGAGGATTGCAGCAGAGCTTCAGTGTCTG...AGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCCCCATGACATTGTCTTaGCCCCCTGCAACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSPMTLS*PPATVR Trigger: TCTGACAGTTGCAGGGGGGCAAGACAATGTCATGGG...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTCACAACAGTAAACACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCTCTCAAGTCTTGTaGTGGGACTTCTTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: MFTTVNTLRDSSLVCDDTSSQVL*WDFFAT Trigger: TGTAGCAAAGAAGTCCCAGCACAAGACTTGAGAGCT...TGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGTGTTTACTGTTGTGAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTAGGTCCAGAAGCTTGTCGAGCAGGTCATAGGCTTCATCAGGTACTGAGTTATTCCCGAACTTCTTaGAAGGAAAGAGAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPEACRAGHRLHQVLSYSRTS*KEREFK Trigger: TTTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATA...ACTCAGTACCTGATGAAGCCTATGACCTGCTCGACAAGCTTCTGGACCTAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAACGTAAAACCATCCAACCTGAAGGCACTTTACAGGAATCTTTACACTACCCAAAAACAGAGCGCTaGACAGAAAGGCCTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQRKTIQPEGTLQESLHYPKTER*TERPTD Trigger: ATCTGTAGGCCTTTCTGTCCAGCGCTCTGTTTTTGG...GTAGTGTAAAGATTCCTGTAAAGTGCCTTCAGGTTGGATGGTTTTACGTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCTCTCAAGTCTTGTGCTaGGACTTCTTTGCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPSQVLC*DFFATQ Trigger: CTGTGTAGCAAAGAAGTCCCAGCACAAGACTTGAGA...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGTCTCAAGTCTTGTGCTaGGACTTCTTTGCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKSQVLC*DFFATQ Trigger: CTGTGTAGCAAAGAAGTCCCAGCACAAGACTTGAGA...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACTGTGGTCAGTGTTCTTaGAAGCAGCAGGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHCGQCS*KQQGHR Trigger: CCTATGACCCTGCTGCTTCCAAGAACACTGACCACA...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCGCAAGGACAGGAATATaGCACCTGCAGACCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSARTGI*HLQTTC Trigger: ACATGTGGTCTGCAGGTGTCATATTCCTGTCCTTGC...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031221.12 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGCGAATTGTCATGATCTaGGCCAAAGCAGTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKRIVMI*AKAVKS Trigger: TGACTTAACTGCTTTGGCTCAGATCATGACAATTCG...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGTATGTCCACAGTCTTTaGTTGCTTGATGAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKYVHSL*LLDELS Trigger: GGAAAGCTCATCAAGCAATCAAAGACTGTGGACATA...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076467.13 ENSMUST00000117196.9 |
||
| CDS-3UTR GCA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGTCCTTCTTGCAACTGTaGTGTGGCCAAATAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYRALYYFVPLSFSQLPKSFLQL*CGQINR Trigger: TCTGTTTATTTGGCCACAGCACAGTTGCAAGAAGGA...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCCCCAGCCTTCTGAGTTaGAAGTGCAGTCTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFPSLLS*KCSLWD Trigger: ATCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGG...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACTGCAGGGCTCTCATGTaGAATGGAGCTGTGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHCRALM*NGAVYI Trigger: AATATACACAGCTCCATTTCACATGAGAGCCCTGCA...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCTATGTCCACAGTCTTTaGTTGCTTGATGAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPYVHSL*LLDEFL Trigger: GAGAAACTCATCAAGCAATCAAAGACTGTGGACATA...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGCGAATTGTCATGATCTaGGCCAAAGCAGTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRRIVMI*AKAVKS Trigger: TGACTTAACTGCTTTGGCTCAGATCATGACAATTCG...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAGTTTAGAACAAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTATCTTCATGTCCTTCTTaGAACTGTGCTGTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERSLEQNNAQISVSSPLLSSCPS*NCAVAK Trigger: TTTGGCCACAGCACAGTTGCAAGAAGGACATGAAGA...TAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTTGTTCTAAACTTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCCAGACACTGAAGCTCTaGTGCAATCCTCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSQTLKL*CNPHRM Trigger: CATCCTATGAGGATTGCAGCAGAGCTTCAGTGTCTG...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAGTTTAGAACAAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACCAAATAAACAGAGCTaGAGGTGCCTTCTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSLEQNNAQISVSSPLLPNKQS*RCLLQF Trigger: AAATTGGAGAAGGCACCTTCAGCTCTGTTTATTTGG...TAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTTGTTCTAAACTTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCTGCAGGGCTCTCATGTaGAATGGAGCTGTGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSCRALM*NGAVYI Trigger: AATATACACAGCTCCATTTCACATGAGAGCCCTGCA...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACATCCTCGAATTGTCATaGTCTGAGCCAAAGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHILELS*SEPKQL Trigger: TAACTGCTTTGGCTCAGATCATGACAATTCGAGGAT...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACTCCTTCTTGCAACTGTaGTGTGGCCAAATAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHSFLQL*CGQINR Trigger: TCTGTTTATTTGGCCACAGCACAGTTGCAAGAAGGA...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCAGCTCTCAAGTCTTGTaGTGGGACTTCTTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSSSQVL*WDFFAT Trigger: TGTAGCAAAGAAGTCCCAGCACAAGACTTGAGAGCT...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTATTCCCGAACTTCTTaGAAGGAAAGAGAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNAEMWMLLANQKTSPVMYSRTS*KEREFK Trigger: TTTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACTTTGACAGAAGTTTTTaGGGTACACTGCTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHFDRSF*GTLLIH Trigger: GTGGATCAGCAGTGTACCCCAAAAACTTCTGTCAAA...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCCGAATTGTCATGATCTaGGCCAAAGCAGTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFRIVMI*AKAVKS Trigger: TGACTTAACTGCTTTGGCTCAGATCATGACAATTCG...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCATCCTCGAATTGTCATaGTCTGAGCCAAAGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGGDKHLCNNYLFICTLSILELS*SEPKQL Trigger: TAACTGCTTTGGCTCAGATCATGACAATTCGAGGAT...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR TCA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATCCTCGAATTGTCATaGTCTGAGCCAAAGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFILELS*SEPKQL Trigger: TAACTGCTTTGGCTCAGATCATGACAATTCGAGGAT...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACACTATTCCCGAACTTCTTaGAAGGAAAGAGAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVTNISAITICSFAHFPHYSRTS*KEREFK Trigger: TTTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATA...GTGTGGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | ACACACACCACCAACAGCCAGTTCCCCCATGCACACAGTGCAGACCACACACTGCTTCTGCTGTTATCCTaGAAGCTGGGTTTAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: THTTNSQFPHAHSADHTLLLLLS*KLGLGP Trigger: TGGACCTAAACCCAGCTTCAAGGATAACAGCAGAAG...CAGTGTGTGGTCTGCACTGTGTGCATGGGGGAACTGGCTGTTGGTGGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTCAGGACCTCTGGCGCTCTGAATCCTGGTGTGCCTGCCCTAGGGGCAACCCTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVRTSGALNPGVPALGATLSVFS*LNVNLC Trigger: ACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAG...GGTTGCCCCTAGGGCAGGCACACCAGGATTCAGAGCGCCAGAGGTCCTGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CAA 90 bp | CGTTGTCCCTTTTATACAAGGAGTCCTCTGAGTGCTGTGCCTGAGCAGCCTGTACTCTTCATGTCCTTCTaGCAACTGTGCTGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RCPFYTRSPLSAVPEQPVLFMSF*QLCCGQ Trigger: TTGGCCACAGCACAGTTGCAAGAAGGACATGAAGAG...TACAGGCTGCTCAGGCACAGCACTCAGAGGACTCCTTGTATAAAAGGGACAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| CDS TCA 90 bp | TGTTTCGTGAACAATCTTCCTGCTGAGCCTCAGACTGGACAAACTTaGGCAGCTCTATTTTTGTGTCACGGGTTCCCTGGGCCAAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: CFVNNLPAEPQTGQT*AALFLCHGFPGPNR Trigger: TCGGTTTGGCCCAGGGAACCCGTGACACAAAAATAGAGCTGCTCAAGTTTGTCCAGTCTGAGGCTCAGCAGGAAGATTGTTCACGAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS TCA 90 bp | ACTCAGCAGGCCCTTGTGTCCAACGACTCCATGATACTTGTTTCGTaGACAATCTTCCTGCTGAGCCTCAGACTGGACAAACTTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQQALVSNDSMILVS*TIFLLSLRLDKLEQ Trigger: CTGCTCAAGTTTGTCCAGTCTGAGGCTCAGCAGGAAGATTGTTCACGAAACAAGTATCATGGAGTCGTTGGACACAAGGGCCTGCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACAAGCAGGAACTCCTCAGCACTCTTCATGTCCTTCTaGCAACTGTGCTGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLRDSSLVCDDTSRNSSALFMSF*QLCCGQ Trigger: TTGGCCACAGCACAGTTGCAAGAAGGACATGAAGAG...TGCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS CCA 90 bp | GACTGGACAAACTTGAGCAGCTCTATTTTTGTGTCACGGGTTCCCTaGGCCAAACCGAAGTCCACCAAGGCATACTTTTTCAGACGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DWTNLSSSIFVSRVP*AKPKSTKAYFFRRL Trigger: TAGACGTCTGAAAAAGTATGCCTTGGTGGACTTCGGTTTGGCCCAGGGAACCCGTGACACAAAAATAGAGCTGCTCAAGTTTGTCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCTCCCAGCCTTCTGAGTaGGAAGTGCAGTCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQTQTTCDYPHRLTTHSSSQPSE*EVQSLG Trigger: TCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGA...GCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGACACAAACAACCTGTGATTATCCACATCGCCTTACAACACACAGCAGCAGAGAGCTCTCAAGTCTaGTGCTGGGACTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRHKQPVIIHIALQHTAAESSQV*CWDFFA Trigger: AGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTC...TGCTGCTGTGTGTTGTAAGGCGATGTGGATAATCACAGGTTGTTTGTGTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTGAGAGCTCTCAAGTCTaGTGCTGGGACTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQKCRNVDAPGKPENIASESSQV*CWDFFA Trigger: AGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTC...ACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGAAAACATCGCCAGTAATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCGAGAGCTCTCAAGTCTaGTGCTGGGACTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NQKTSPVMSSSMLTFPVAESSQV*CWDFFA Trigger: AGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTC...GGCCACAGGAAAAGTGAGCATAGAACTGGACATTACTGGCGATGTTTTCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTCCCAGCCTTCTGAGTaGGAAGTGCAGTCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNAEMWMLLANQKTSPVMSQPSE*EVQSLG Trigger: TCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCAGTTTCTCCCTGTCATACCTGTTAGCTTTATGACCTGTACCTCGAACCTCTTCATGTCCTTCTaGCAACTGTGCTGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSQFLPVIPVSFMTCTSNLFMSF*QLCCGQ Trigger: TTGGCCACAGCACAGTTGCAAGAAGGACATGAAGAG...GTTCGAGGTACAGGTCATAAAGCTAACAGGTATGACAGGGAGAAACTGAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCTCCCAGCCTTCTGAGTaGGAAGTGCAGTCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPSQPSE*EVQSLG Trigger: TCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGA...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCCTCTTCATGTCCTTCTaGCAACTGTGCTGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPLFMSF*QLCCGQ Trigger: TTGGCCACAGCACAGTTGCAAGAAGGACATGAAGAG...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGGGCAGGACCTGGCAGTTTCCCTCATCACGCTGTTCATAGCTTTTGTAATATTCCCGAACTTCTaGGAAGGAAAGAGAATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAGQDLAVSLITLFIAFVIFPNF*EGKRIQ Trigger: TTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATAT...TACAAAAGCTATGAACAGCGTGATGAGGGAAACTGCCAGGTCCTGCCCTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGAAAACATCGCCAGTAATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCACAGTCTTTGATTGCTaGATGAGTTTCTCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NQKTSPVMSSSMLTFPVATVFDC*MSFSAG Trigger: CCCTGCAGAGAAACTCATCAAGCAATCAAAGACTGT...GGCCACAGGAAAAGTGAGCATAGAACTGGACATTACTGGCGATGTTTTCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAATGCACAAATCTCCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTCCCAGCCTTCTGAGTaGGAAGTGCAGTCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIMHKSPYRALYYFVPLSSQPSE*EVQSLG Trigger: TCCCAAAGACTGCACTTCCAACTCAGAAGGCTGGGA...AGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGGAGATTTGTGCATTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGCTTCTGCTGTTATCCTaGAAGCTGGGTTTAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RNAEMWMLLANQKTSPVMLLLLS*KLGLGP Trigger: TGGACCTAAACCCAGCTTCAAGGATAACAGCAGAAG...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTAATATTCCCGAACTTCTaGGAAGGAAAGAGAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: VHPDSWKPGMLSRTERSLIFPNF*EGKRIQ Trigger: TTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATAT...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | GTCCATCCTGACTCCTGGAAGCCTGGTATGCTATCTCGGACAGAGAGAAGTTTATTGCTTAATGTGAACTaGTGTGTAGGATCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: VHPDSWKPGMLSRTERSLLLNVN*CVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAA...TAAACTTCTCTCTGTCCGAGATAGCATACCAGGCTTCCAGGAGTCAGGATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGCTTCTGCTGTTATCCTaGAAGCTGGGTTTAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PYRALYYFVPLSFSQLPKLLLLS*KLGLGP Trigger: TGGACCTAAACCCAGCTTCAAGGATAACAGCAGAAG...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCCTTCTGCTGTTATCCTaGAAGCTGGGTTTAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPLLLLS*KLGLGP Trigger: TGGACCTAAACCCAGCTTCAAGGATAACAGCAGAAG...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCCTCTTCATGTCCTTCTaGCAACTGTGCTGTGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LGGDKHLCNNYLFICTLSLFMSF*QLCCGQ Trigger: TTGGCCACAGCACAGTTGCAAGAAGGACATGAAGAG...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTTGGGATGACTCCAATAGCCATCGTTGTCCCTTTTATACAAGGAGTCTTGCTTAATGTGAACTaGTGTGTAGGATCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: AVFGMTPIAIVVPFIQGVLLNVN*CVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAA...GACTCCTTGTATAAAAGGGACAACGATGGCTATTGGAGTCATCCCAAAGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| CDS-3UTR CAA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCGAGAGCTCTCAAGTCTaGTGCTGGGACTTCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFESSQV*CWDFFA Trigger: AGCAAAGAAGTCCCAGCACAAGACTTGAGAGCTCTC...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | AGAAATGCAGAAATGTGGATGCTCCTGGCAAACCAGAAAACATCGCCAGTAATGTTGCTTAATGTGAACTaGTGTGTAGGATCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: RNAEMWMLLANQKTSPVMLLNVN*CVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAA...CATTACTGGCGATGTTTTCTGGTTTGCCAGGAGCATCCACATTTCTGCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | ATGTTCACAACAGTAAACACTCTGAGAGACAGCTCCCTAGTCTGTGATGATACACTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: MFTTVNTLRDSSLVCDDTLSVFS*LNVNLC Trigger: ACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAG...TGTATCATCACAGACTAGGGAGCTGTCTCTCAGAGTGTTTACTGTTGTGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGCTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: PYRALYYFVPLSFSQLPKLSVFS*LNVNLC Trigger: ACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAG...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | ATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCCTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: IEPSTTLSPYLFLNYLRPLSVFS*LNVNLC Trigger: ACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAG...GGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGATATTCCCGAACTTCTaGGAAGGAAAGAGAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: PYRALYYFVPLSFSQLPKIFPNF*EGKRIQ Trigger: TTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATAT...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGACCCATTCCCATATTCCCGAACTTCTaGGAAGGAAAGAGAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: PSTTLSPYLFLNYLRPIPIFPNF*EGKRIQ Trigger: TTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATAT...GGGAATGGGTCTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CCGTATCGAGCCCTCTACTACTTTGTCCCCTTATCTTTTTCTCAATTACCTAAGTTGCTTAATGTGAACTaGTGTGTAGGATCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: PYRALYYFVPLSFSQLPKLLNVN*CVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAA...CTTAGGTAATTGAGAAAAAGATAAGGGGACAAAGTAGTAGAGGGCTCGATACGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCACAGTCTTTGATTGCTaGATGAGTTTCTCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LGGDKHLCNNYLFICTLSTVFDC*MSFSAG Trigger: CCCTGCAGAGAAACTCATCAAGCAATCAAAGACTGT...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | AATGTCCAGTTCTATGCTCACTTTTCCTGTGGCCATTACCTAACTAAACAAAGGTTGCTTAATGTGAACTaGTGTGTAGGATCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: NVQFYAHFSCGHYLTKQRLLNVN*CVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAA...CCTTTGTTTAGTTAGGTAATGGCCACAGGAAAAGTGAGCATAGAACTGGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | CTTACAATGACTGTGTTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCCTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LTMTVLGGDKHLCNNYLFLSVFS*LNVNLC Trigger: ACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAG...GAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAACACAGTCATTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS-3UTR CAA 90 bp | TTAGGAGGTGACAAACATCTCTGCAATAACTATTTGTTCATTTGCACACTTTCCATATTCCCGAACTTCTaGGAAGGAAAGAGAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: LGGDKHLCNNYLFICTLSIFPNF*EGKRIQ Trigger: TTGAATTCTCTTTCCTTCCAAGAAGTTCGGGAATAT...GGAAAGTGTGCAAATGAACAAATAGTTATTGCAGAGATGTTTGTCACCTCCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 |
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| CDS CCA 72 bp | CCACTGAGCAAGGACAGGAATATGACACCTGTGGTCTaGTCAGGACACTTTGTCAGGACCTCTGGCGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLSKDRNMTPVV*SGHFVRTSGAL Trigger: CAGAGCGCCAGAGGTCCTGACAAAGTGTCCTGACCAGACCACAGGTGTCATATTCCTGTCCTTGCTCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076467.13 |
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| CDS TCA 72 bp | AACAATCTTCCTGCTGAGCCTCAGACTGGACAAACTTaGGCAGCTCTATTTTTGTGTCACGGGTTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NNLPAEPQTGQT*AALFLCHGFPG Trigger: CCCAGGGAACCCGTGACACAAAAATAGAGCTGCTCAAGTTTGTCCAGTCTGAGGCTCAGCAGGAAGATTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS TCA 72 bp | GCCCTTGTGTCCAACGACTCCATGATACTTGTTTCGTaGACAATCTTCCTGCTGAGCCTCAGACTGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: ALVSNDSMILVS*TIFLLSLRLDK Trigger: TTTGTCCAGTCTGAGGCTCAGCAGGAAGATTGTTCACGAAACAAGTATCATGGAGTCGTTGGACACAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS CCA 72 bp | AACTTGAGCAGCTCTATTTTTGTGTCACGGGTTCCCTaGGCCAAACCGAAGTCCACCAAGGCATACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NLSSSIFVSRVP*AKPKSTKAYFF Trigger: GAAAAAGTATGCCTTGGTGGACTTCGGTTTGGCCCAGGGAACCCGTGACACAAAAATAGAGCTGCTCAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS CAA 90 bp | ATGAGTTTCTCTGCAGGGCTCTCATGTGAAATGGAGCTGTGTATATaGAAATTTCTCTCTCCAAAAACAGAGCGCTGGACAGAAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: MSFSAGLSCEMELCI*KFLSPKTERWTERP Trigger: AGGCCTTTCTGTCCAGCGCTCTGTTTTTGGAGAGAGAAATTTCAATATACACAGCTCCATTTCACATGAGAGCCCTGCAGAGAAACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
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| CDS CAA 90 bp | TGTTCTTTCTCTGCAGGGCTCTCATGTGAAATGGAGCTGTGTATATaGAAATTTCTCTCTCCAAAAACAGAGCGCTGGACAGAAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSFSAGLSCEMELCI*KFLSPKTERWTERP Trigger: AGGCCTTTCTGTCCAGCGCTCTGTTTTTGGAGAGAGAAATTTCAATATACACAGCTCCATTTCACATGAGAGCCCTGCAGAGAAAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129938.8 |
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| CDS CAA 72 bp | TCTGCAGGGCTCTCATGTGAAATGGAGCTGTGTATATaGAAATTTCTCTCTCCAAAAACAGAGCGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SAGLSCEMELCI*KFLSPKTERWT Trigger: TGTCCAGCGCTCTGTTTTTGGAGAGAGAAATTTCAATATACACAGCTCCATTTCACATGAGAGCCCTGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS GCA 72 bp | GCTAGCTTTCGTGATATTATGTCCACAGTCTTTGATTaGTTGATGAGTTTCTCTGCAGGGCTCTCATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ASFRDIMSTVFD*LMSFSAGLSCE Trigger: TTCACATGAGAGCCCTGCAGAGAAACTCATCAAGCAATCAAAGACTGTGGACATAATATCACGAAAGCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
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| CDS CAA 72 bp | AGAAAGGCCTACAGATCTCTCCTTTCCGTCTTTTCCTaGCTTAATGTGAACTTGTGTGTAGGATCTTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RKAYRSLLSVFS*LNVNLCVGSFD Trigger: GTCAAAAGATCCTACACACAAGTTCACATTAAGCAAGGAAAAGACGGAAAGGAGAGATCTGTAGGCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS CAA 72 bp | AGCTTTCGTGATATTATGTCCACAGTCTTTGATTGCTaGATGAGTTTCTCTGCAGGGCTCTCATGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFRDIMSTVFDC*MSFSAGLSCEM Trigger: CATTTCACATGAGAGCCCTGCAGAGAAACTCATCAAGCAATCAAAGACTGTGGACATAATATCACGAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031221.12 ENSMUST00000118261.8 |
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| CDS CAA 90 bp | GAGCTGAAGGTGCCTTCTCCAATTTTGTCCTTAATTTTGAACACATaGACTAGTTGTGGTACAGCTTCACAAAGCTCCTCAATATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ELKVPSPILSLILNT*TSCGTASQSSSISL Trigger: AAGAGATATTGAGGAGCTTTGTGAAGCTGTACCACAACTAGTCAATGTGTTCAAAATTAAGGACAAAATTGGAGAAGGCACCTTCAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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| CDS CAA 72 bp | GTGCCTTCTCCAATTTTGTCCTTAATTTTGAACACATaGACTAGTTGTGGTACAGCTTCACAAAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPSPILSLILNT*TSCGTASQSSS Trigger: TGAGGAGCTTTGTGAAGCTGTACCACAACTAGTCAATGTGTTCAAAATTAAGGACAAAATTGGAGAAGGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031221.12 ENSMUST00000076467.13 ENSMUST00000117196.9 ENSMUST00000118261.8 ENSMUST00000129938.8 |
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