Pregenerated sensors for CDC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017499Ensembl transcript IDs: ENSMUST00000092706.13, ENSMUST00000093937.3, ENSMUST00000133779.9
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGCCAAGCCTCAACTACATCGGAGGCGGGGAGGCCGCTCCTCTTTaGGCAGGATCCTACTATGGACACAGAACAGACAGCAGCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: APSLNYIGGGEAAPL*AGSYYGHRTDSSCP Trigger: TGGGCAGCTGCTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATGTAGTTGAGGCTTGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | CATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATaGACACAGAACAGACAGCAGCTGCCCACAGTGTGGAAACAAACT | + |
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Preference number: 1 (lower is better) Translates to: HRRRGGRSSLGRILL*TQNRQQLPTVWKQT Trigger: AGTTTGTTTCCACACTGTGGGCAGCTGCTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | AATGCATCAGCAACCTCCCAAACAAGTCGGACTCAGGCACCTTCCTaGCCCTTCCCTCAAAACCACCCTTGCCCGGGCCACACTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: NASATSQTSRTQAPS*PFPQNHPCPGHTFK Trigger: TTTGAAAGTGTGGCCCGGGCAAGGGTGGTTTTGAGGGAAGGGGCAGGAAGGTGCCTGAGTCCGACTTGTTTGGGAGGTTGCTGATGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | GTTGTTTCTGGAGTCTCTGTAGACCAGACTGTCCTGGAACATGTCTaGAACACAGGGACCCGCCTGCCTCTATCTATCACCTGCGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VVSGVSVDQTVLEHV*NTGTRLPLSITCGL Trigger: CAGCCCGCAGGTGATAGATAGAGGCAGGCGGGTCCCTGTGTTTCAGACATGTTCCAGGACAGTCTGGTCTACAGAGACTCCAGAAACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | CTCCTCCTTTCCGCCTCGGCGTCTGAATTACACTTAAGACTTTGCTaGCAAACATACATCAGCCTCTGCTCCCACAAGGGCAGCGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LLLSASASELHLRLC*QTYISLCSHKGSGS Trigger: GCTTCCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTTGTCAGCAAAGTCTTAAGTGTAATTCAGACGCCGAGGCGGAAAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | GGTCTTGTGCACCGCCCCAGAGGGAATGTGTATTCTATGAGTGAGTaGTTGGCATCCAATCTCCTCTCTACAGTCTTCTGCAGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GLVHRPRGNVYSMSE*LASNLLSTVFCSGQ Trigger: CTGCCCACTGCAGAAGACTGTAGAGAGGAGATTGGATGCCAAGCACTCACTCATAGAATACACATTCCCTCTGGGGCGGTGCACAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | TGTTTTCTTGGCTCAAAGTCACCCTGTTCCCATCAACTTCCGAAATaGCTTGGGATATGTGAGCAAGACCAACGCGCTTGGGGACCGGCG | + |
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Preference number: 1 (lower is better) Translates to: CFLGSKSPCSHQLPK*LGICEQDQRAWGPA Trigger: CGCCGGTCCCCAAGCGCGTTGGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTTGATGGGAACAGGGTGACTTTGAGCCAAGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | CCTGGAGAAAAGCAAAGACTCAGACAGTTCATCCCAGGCATGGTTTaGTCCCAAGCACTTAGCCAGGTACGAATGCATCAGCAACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PGEKQRLRQFIPGMV*SQALSQVRMHQQPP Trigger: GGGAGGTTGCTGATGCATTCGTACCTGGCTAAGTGCTTGGGAGCAAACCATGCCTGGGATGAACTGTCTGAGTCTTTGCTTTTCTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | CCTCGCCTGGAGAAAAGCAAAGACTCAGACAGTTCATCCCAGGCATaGTTTGCTCCCAAGCACTTAGCCAGGTACGAATGCATCAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PRLEKSKDSDSSSQA*FAPKHLARYECISN Trigger: GTTGCTGATGCATTCGTACCTGGCTAAGTGCTTGGGAGCAAACCATGCCTGGGATGAACTGTCTGAGTCTTTGCTTTTCTCCAGGCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | AGCCGCCGGGTCAAAAGCAGCAAAGAGCAAACCAGGATCTTCTGCTaGAGAGGAAGGGAATCCTGTGTGTTTTCTTGGCTCAAAGTCACC | + |
|
Preference number: 1 (lower is better) Translates to: SRRVKSSKEQTRIFC*RGRESCVFSWLKVT Trigger: GGTGACTTTGAGCCAAGAAAACACACAGGATTCCCTTCCTCTCCAGCAGAAGATCCTGGTTTGCTCTTTGCTGCTTTTGACCCGGCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | CCCTCTGGTGTCCCTGTCACAAACTGCCACTTGATGCCAGGAAGATaGACTTCTCTAGGGAGCCTAGAAAGAGGGGCTCAGATGAAAATT | + |
|
Preference number: 1 (lower is better) Translates to: PSGVPVTNCHLMPGR*TSLGSLERGAQMKI Trigger: AATTTTCATCTGAGCCCCTCTTTCTAGGCTCCCTAGAGAAGTTCATCTTCCTGGCATCAAGTGGCAGTTTGTGACAGGGACACCAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | CCAGCAGCGAGGATGTTCCCGGTGAAAGCTTTGCCGTTCAGGACATaGTCTATTTCCTTTTCTTCAATCTTCAGAGACACCTTGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PAARMFPVKALPFRT*SISFSSIFRDTLVR Trigger: CCTCACCAAGGTGTCTCTGAAGATTGAAGAAAAGGAAATAGAGCATGTCCTGAACGGCAAAGCTTTCACCGGGAACATCCTCGCTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | TTGTGCTCGTTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCTTaGGAGAGTATGGTCTTGTGCACCGCCCCAGAGGGAATGTGTATT | + |
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Preference number: 1 (lower is better) Translates to: LCSLTLTVPDSLQTP*ESMVLCTAPEGMCI Trigger: AATACACATTCCCTCTGGGGCGGTGCACAAGACCATACTCTCCCAAGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | TCAAAAGGAGGAAATGTAGGTCAGCATCTTTGCCACTACGCCATGTaGCCTAAGATCCTGGCAAAAACTAGCAACCACAGGCCCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: SKGGNVGQHLCHYAM*PKILAKTSNHRPIP Trigger: AGGGATGGGCCTGTGGTTGCTAGTTTTTGCCAGGATCTTAGGCCACATGGCGTAGTGGCAAAGATGCTGACCTACATTTCCTCCTTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | AAAGCAGCAAGGAAAGGCCTCTCTCCTCCTTTCCGCCTCGGCGTCTaGATTACACTTAAGACTTTGCTGACAAACATACATCAGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KAARKGLSPPFRLGV*ITLKTLLTNIHQPL Trigger: CAGAGGCTGATGTATGTTTGTCAGCAAAGTCTTAAGTGTAATTCAGACGCCGAGGCGGAAAGGAGGAGAGAGGCCTTTCCTTGCTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | AGGATCCTACTATGGACACAGAACAGACAGCAGCTGCCCACAGTGTaGAAACAAACTGTAAAGCAGTCACGTCTCTTAAGGCTGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: RILLWTQNRQQLPTV*KQTVKQSRLLRLQH Trigger: ATGCTGCAGCCTTAAGAGACGTGACTGCTTTACAGTTTGTTTCCACACTGTGGGCAGCTGCTGTCTGTTCTGTGTCCATAGTAGGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | TTCGGTCTCTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTaGTCGTTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: FGLCFPSVFGQSLQL*SLTLTVPDSLQTPW Trigger: CCAAGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAGAGACCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CCA 90 bp | TCTCATGTAGTCCAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATaGCCTTTAACTCTTGACTCTATTTCCCAAGTGCTGGGATCACAG | + |
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Preference number: 1 (lower is better) Translates to: SHVVQASSSSLCSKG*PLTLDSISQVLGSQ Trigger: CTGTGATCCCAGCACTTGGGAAATAGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTGGACTACATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| 3UTR TCA 90 bp | TCACCTGCGGGCTGGGATTTAAGGGTGTGTACTACCAAGGCCCGATaGGAAGGTATTTTCTTATTAACCTCTGAAAACCTAAGCTACCAT | + |
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Preference number: 1 (lower is better) Translates to: SPAGWDLRVCTTKAR*EGIFLLTSENLSYH Trigger: ATGGTAGCTTAGGTTTTCAGAGGTTAATAAGAAAATACCTTCTCATCGGGCCTTGGTAGTACACACCCTTAAATCCCAGCCCGCAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR GCA 90 bp | AATTTAAATCAAGCCTCACATCTGTTCTCAATCCCATTCGGTCTCTaGTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTA | + |
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Preference number: 1 (lower is better) Translates to: NLNQASHLFSIPFGL*FPSVFGQSLQLCSL Trigger: TAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAGAGACCGAATGGGATTGAGAACAGATGTGAGGCTTGATTTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CAA 90 bp | GGCGCCAAGCCTCAACTACATCGGAGGCGGGGAGGCCGCTCCTCTTaGGGCAGGATCCTACTATGGACACAGAACAGACAGCAGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GAKPQLHRRRGGRSS*GRILLWTQNRQQLP Trigger: GGGCAGCTGCTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATGTAGTTGAGGCTTGGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | TCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGAAACAGCCCAGTCCCACTaGGAGTCAAACCCTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SEAGRPLLFGQDPTMDTETAQSH*ESNPVP Trigger: AGGAACAGGGTTTGACTCTCAGTGGGACTGGGCTGT...TTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | ATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGAACAGCCCAGTCCCACTaGGAGTCAAACCCTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: IGGGEAAPLWAGSYYGHRTAQSH*ESNPVP Trigger: AGGAACAGGGTTTGACTCTCAGTGGGACTGGGCTGT...TCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCCTTCCCTCAAAACCACCCTTGCCCGGGCCACACTTTCAAAGCGGCGTTTCGCCAACTTTTTGTTaGCTATCTTCAGTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLPSKPPLPGPHFQSGVSPTFC*LSSVLG Trigger: CCCCAGCACTGAAGATAGGCAACAAAAAGTTGGCGA...AACGCCGCTTTGAAAGTGTGGCCCGGGCAAGGGTGGTTTTGAGGGAAGGGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGAAGCCCTATTTCCAAATaGGGAGAAGACAGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: IGGGEAAPLWAGSYYGHRSPISK*GEDRER Trigger: CCTCTCTCTGTCTTCTCCCCATTTGGAAATAGGGCT...TCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | GAATCTGTAAATGCAATCTTGGCTAGAAGCCAGGGAGGATACAGCCCAGTCCCACTGGGGGCTCTCAAATaGCAGTGGGAGGGACACCTG | + |
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Preference number: 2 (lower is better) Translates to: ESVNAILARSQGGYSPVPLGALK*QWEGHL Trigger: CAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAG...TGGGACTGGGCTGTATCCTCCCTGGCTTCTAGCCAAGATTGCATTTACAGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTGGGGGCTCTCAAATaGCAGTGGGAGGGACACCTG | + |
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Preference number: 2 (lower is better) Translates to: GCIKQWPTDLLYPYQIPKLGALK*QWEGHL Trigger: CAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAG...CTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCAGGCTGCTCTCAAATGCCAGTaGGAGGGACACCTGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PIPPAVGFRSLYKDNVQAALKCQ*EGHLQV Trigger: CACTTGCAGGTGTCCCTCCCACTGGCATTTGAGAGC...AGCCTGCACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCTTCCCTCAAAACCACCCTTGCCCGGGCCACACTTTCAAAGCGGCGTTAGCTACCATGGAGTGTaGCTGCTTAAAAAGACGAAC | + |
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Preference number: 2 (lower is better) Translates to: LPLPSKPPLPGPHFQSGVSYHGV*LLKKTN Trigger: GTTCGTCTTTTTAAGCAGCCACACTCCATGGTAGCT...AACGCCGCTTTGAAAGTGTGGCCCGGGCAAGGGTGGTTTTGAGGGAAGGGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCAGGCTGACAAACACTCAGACTaGTCTACGGCCGTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PIPPAVGFRSLYKDNVQADKHSD*STAVTC Trigger: GCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTC...AGCCTGCACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR CAA 90 bp | TTCTTGGCTCAAAGTCACCCTGTTCCCATCAACTTCCGAAATGACTaGGGATATGTGAGCAAGACCAACGCGCTTGGGGACCGGCGACTC | + |
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Preference number: 2 (lower is better) Translates to: FLAQSHPVPINFRND*GYVSKTNALGDRRL Trigger: GAGTCGCCGGTCCCCAAGCGCGTTGGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTTGATGGGAACAGGGTGACTTTGAGCCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGACCCATAAAATGGCTTaGAGGGTAGGCGCTGGTCGC | + |
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Preference number: 2 (lower is better) Translates to: TLSKRRCNGALWCPCHKLTHKMA*RVGAGR Trigger: GCGACCAGCGCCTACCCTTCAAGCCATTTTATGGGT...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAGGGAGGATACAGCCCAGTCCCACTGAGAGTCAAACCCTGTTCCTGACTCTCTCTACAGTCTTCTaGAGTGGGCAGTGTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: KPGRIQPSPTESQTLFLTLSTVF*SGQCAS Trigger: AGATGCACACTGCCCACTGCAGAAGACTGTAGAGAG...AGTCAGGAACAGGGTTTGACTCTCAGTGGGACTGGGCTGTATCCTCCCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAGCTACCATGGAGTGTaGCTGCTTAAAAAGACGAAC | + |
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Preference number: 2 (lower is better) Translates to: RATLSKRRCNGALWCPCHSYHGV*LLKKTN Trigger: GTTCGTCTTTTTAAGCAGCCACACTCCATGGTAGCT...GTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGTGGCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGCTGGAATCACTGGTATaGCCCACCATCCTGGACGTC | + |
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Preference number: 2 (lower is better) Translates to: TLSKRRCNGALWCPCHKLLESLV*PTILDV Trigger: GACGTCCAGGATGGTGGGCCATACCAGTGATTCCAG...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | TCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGAACATTTTCCTGTTTCATaGTTTAAGAGTCCCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SEAGRPLLFGQDPTMDTEHFPVS*FKSPLC Trigger: GCACAGGGGACTCTTAAACCATGAAACAGGAAAATG...TTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | AATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGGTCCTGGAACATGTCTaGAACACAGGGACCCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NRQCVWGVCVCVLKETKQVLEHV*NTGTRL Trigger: CAGGCGGGTCCCTGTGTTTCAGACATGTTCCAGGAC...CTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | CCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCAGGCTAAAGAGGGGCTCAGATaGAAATTCATCCGGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PIPPAVGFRSLYKDNVQAKEGLR*KFIRSC Trigger: GCAGCTCCGGATGAATTTTCATCTGAGCCCCTCTTT...AGCCTGCACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | AATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGACACAGGGACCCGCCTaGCTCTATCTATCACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: NRQCVWGVCVCVLKETKQTQGPA*LYLSPA Trigger: CGCAGGTGATAGATAGAGGCAGGCGGGTCCCTGTGT...CTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR CAA 90 bp | GTTGTGCTCGTTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCTaGGGAGAGTATGGTCTTGTGCACCGCCCCAGAGGGAATGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: VVLVNPYSSRLSPNS*GEYGLVHRPRGNVY Trigger: ATACACATTCCCTCTGGGGCGGTGCACAAGACCATACTCTCCCAAGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACACCTGCAAGTGCCATGAGTAAGAGCCATTCAGGGCAGACCAGCAGCGAGCTGTGTTTAGGAATGTaGAAGGGGAAAAGTACTGAA | + |
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Preference number: 2 (lower is better) Translates to: GTPASAMSKSHSGQTSSELCLGM*KGKSTE Trigger: TTCAGTACTTTTCCCCTTTCACATTCCTAAACACAG...CTCGCTGCTGGTCTGCCCTGAATGGCTCTTACTCATGGCACTTGCAGGTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR TCA 90 bp | ATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGATTTCTTATTAACCTCTaGAAACCTAAGCTACCATGG | + |
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Preference number: 2 (lower is better) Translates to: IGGGEAAPLWAGSYYGHRFLINL*KPKLPW Trigger: CCATGGTAGCTTAGGTTTTCAGAGGTTAATAAGAAA...TCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCATCCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCAAACCAGGATCTTCTaGTGGAGAGGAAGGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: SHPIPPAVGFRSLYKDNVQTRIF*WRGRES Trigger: GGATTCCCTTCCTCTCCAGCAGAAGATCCTGGTTTG...CACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGGATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | AAACATACATCAGCCTCTGCTCCCACAAGGGCAGCGGAAGCCAAGCAGGGACTCATCCTATTGAAACAATaGCTCTGTCTGAGGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KHTSASAPTRAAEAKQGLILLKQ*LCLREA Trigger: AGCTTCCCTCAGACAGAGCCATTGTTTCAATAGGAT...GAGTCCCTGCTTGGCTTCCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCATCCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGACCAGGATCTTCTGCTaGAGAGGAAGGGAATCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHPIPPAVGFRSLYKDNVTRIFC*RGRESC Trigger: ACAGGATTCCCTTCCTCTCCAGCAGAAGATCCTGGT...CACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGGATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR CAA 90 bp | GCCATTCAGGGCAGACCAGCAGCGAGGATGTTCCCGGTGAAAGCTTaGCCGTTCAGGACATGCTCTATTTCCTTTTCTTCAATCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: AIQGRPAARMFPVKA*PFRTCSISFSSIFR Trigger: TCTGAAGATTGAAGAAAAGGAAATAGAGCATGTCCTGAACGGCAAAGCTTTCACCGGGAACATCCTCGCTGCTGGTCTGCCCTGAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGGCAACACCTGTCACATaGATGAGGCATCCTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: ASNSGQQISCTHIRFPSSATPVT*MRHPLN Trigger: GTTCAGAGGATGCCTCATTCATGTGACAGGTGTTGC...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGCTCTCTACAGTCTTCTaGAGTGGGCAGTGTGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: ASNSGQQISCTHIRFPSSLSTVF*SGQCAS Trigger: AGATGCACACTGCCCACTGCAGAAGACTGTAGAGAG...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTAACCCTTACGCTCTCAAATGCCAGTaGGAGGGACACCTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLPISLRTIFTVVLVNPYALKCQ*EGHLQV Trigger: CACTTGCAGGTGTCCCTCCCACTGGCATTTGAGAGC...GTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAATCCCACAAGGCCCCTaGACTCCAGGAGTCCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: IMCRLHQTVANRSPVPISIPQGP*TPGVLK Trigger: TTTCAGGACTCCTGGAGTCCAGGGGCCTTGTGGGAT...TGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCTGGGGGCTCTCAAATaGCAGTGGGAGGGACACCTG | + |
|
Preference number: 2 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQLGALK*QWEGHL Trigger: CAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAG...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | CACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTAGGAATGCTCTCAAATGCCAGTaGGAGGGACACCTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HTLSNTSPYILVGTVFRNALKCQ*EGHLQV Trigger: CACTTGCAGGTGTCCCTCCCACTGGCATTTGAGAGC...ATTCCTAAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | AAACATACATCAGCCTCTGCTCCCACAAGGGCAGCGGAAGCCAAGCAGGGACTCACTCGGTCATTTTTATaGGTAAAACCAGTAAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: KHTSASAPTRAAEAKQGLTRSFL*VKPVRT Trigger: GGTTCTTACTGGTTTTACCCATAAAAATGACCGAGT...GAGTCCCTGCTTGGCTTCCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CAA 90 bp | CCATTCGGTCTCTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTaGTGCTCGTTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PFGLCFPSVFGQSLQ*CSLTLTVPDSLQTP Trigger: AGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAGAGACCGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCATGTAATGGTGCCCTCTaGTGTCCCTGTCACAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: IMCRLHQTVANRSPVPISCNGAL*CPCHKL Trigger: CAGTTTGTGACAGGGACACCAGAGGGCACCATTACA...TGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCAAACGACCTTACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGGCAACACCTGTCACATaGATGAGGCATCCTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FPNDLTKMKILGALKCQWATPVT*MRHPLN Trigger: GTTCAGAGGATGCCTCATTCATGTGACAGGTGTTGC...CCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGTAAGGTCGTTTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGACAGCAGCTGCCCACAGTGTGGAAACAAACTGTAAAGCAGTCACGTCTCTTCATCAACTTCCGAAATaGCTTGGGATATGTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QTAAAHSVETNCKAVTSLHQLPK*LGICEQ Trigger: TTGCTCACATATCCCAAGTCATTTCGGAAGTTGATG...AAGAGACGTGACTGCTTTACAGTTTGTTTCCACACTGTGGGCAGCTGCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTAACCCTTACCCCAGAGACAACAAATaGAGCCCAGACAAACGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LLPISLRTIFTVVLVNPYPRDNK*SPDKRN Trigger: GTTTCGTTTGTCTGGGCTGCATTTGTTGTCTCTGGG...GTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | GAATCTGTAAATGCAATCTTGGCTAGAAGCCAGGGAGGATACAGCCCAGTCCCATGTTGTTGTTGTTTCTaGAGTCTCTGTAGACCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ESVNAILARSQGGYSPVPCCCCF*SLCRPD Trigger: GTCTGGTCTACAGAGACTCCAGAAACAACAACAACA...TGGGACTGGGCTGTATCCTCCCTGGCTTCTAGCCAAGATTGCATTTACAGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTGCCTATCTTCAGTGCTaGGGAACCTTTATTTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CAGCIKQWPTDLLYPYQIAYLQC*GTFISV Trigger: CACAGAAATAAAGGTTCCCCAGCACTGAAGATAGGC...AATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTAACCCTTACTGTGTGTGTGTGTGCTaGAGGAAACAAAACAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLPISLRTIFTVVLVNPYCVCVC*RKQNSP Trigger: TGGACTGTTTTGTTTCCTTCAGCACACACACACACA...GTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATACTCTATTTCCCAAGTaGTGGGATCACAGGCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: REILHQSLKSPGQQHLSHTLFPK*WDHRHK Trigger: TTTATGCCTGTGATCCCAGCACTTGGGAAATAGAGT...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCTATTTCCCAAGTGCTaGGATCACAGGCATAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CAGCIKQWPTDLLYPYQILFPKC*DHRHKS Trigger: ACTTTTATGCCTGTGATCCCAGCACTTGGGAAATAG...AATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | ATAATGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCACTGTGTTTAGGAATGTaGAAGGGGAAAAGTACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IMCRLHQTVANRSPVPISLCLGM*KGKSTE Trigger: TTCAGTACTTTTCCCCTTTCACATTCCTAAACACAG...TGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAAAAAGAGGGGCTCAGATaGAAATTCATCCGGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKKEGLR*KFIRSC Trigger: GCAGCTCCGGATGAATTTTCATCTGAGCCCCTCTTT...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCAAACGACCTTACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGACTCTATTTCCCAAGTaGTGGGATCACAGGCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: FPNDLTKMKILGALKCQWTLFPK*WDHRHK Trigger: TTTATGCCTGTGATCCCAGCACTTGGGAAATAGAGT...CCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGTAAGGTCGTTTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATAAAAGTACTGAACATTaGTTTAAAAAGGGCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: REILHQSLKSPGQQHLSHKSTEH*FKKGHC Trigger: ACAGTGGCCCTTTTTAAAGCAATGTTCAGTACTTTT...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTGTTGCCTATCTTCAGTaGTGGGGAACCTTTATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: YIHTLSNTSPYILVGTVFVAYLQ*WGTFIS Trigger: AGAAATAAAGGTTCCCCAGCACTGAAGATAGGCAAC...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAAGGAATGTGTATTCTATaGGTGAGTGCTTGGCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKGMCIL*VSAWHP Trigger: TGGATGCCAAGCACTCACTCATAGAATACACATTCC...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR GCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAAGCTGTTTGCGACAGATaGTACTGTAGGCTTCATATA | + |
|
Preference number: 2 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKAVCDR*YCRLHI Trigger: TATATGAAGCCTACAGTAGCATCTGTCGCAAACAGC...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR TCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAATTTCTTATTAACCTCTaGAAACCTAAGCTACCATGG | + |
|
Preference number: 2 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKFLINL*KPKLPW Trigger: CCATGGTAGCTTAGGTTTTCAGAGGTTAATAAGAAA...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | CGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATaGACACAGAACAGACAGCAGCTGCCCACAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGGRSSLGRILL*TQNRQQLPTVW Trigger: CCACACTGTGGGCAGCTGCTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGGACAAACACTCAGACTGGTCTACGGCCGTCACCTGCTGTTTGCGACAGCCCAGGGTGACCTCTTaGATTTTCAGCCGCCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ERDKHSDWSTAVTCCLRQPRVTS*IFSRRV Trigger: GACCCGGCGGCTGAAAATCAAAGAGGTCACCCTGGG...CTGTCGCAAACAGCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | CTTGGCATCCAATCTCCTCTCTACAGTCTTCTGCAGTaGGCAGTGTGCATCTCAGAGGGCGTCGAGCGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGIQSPLYSLLQ*AVCISEGVERA Trigger: GGCTCGCTCGACGCCCTCTGAGATGCACACTGCCCACTGCAGAAGACTGTAGAGAGGAGATTGGATGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | CTCAACTACATCGGAGGCGGGGAGGCCGCTCCTCTTTaGGCAGGATCCTACTATGGACACAGAACAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LNYIGGGEAAPL*AGSYYGHRTDS Trigger: GCTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATGTAGTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | CAATCTCCTCTCTACAGTCTTCTGCAGTGGGCAGTGTaGATCTCAGAGGGCGTCGAGCGAGCCCTCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: QSPLYSLLQWAV*ISEGVERALLS Trigger: AGATAGGAGGGCTCGCTCGACGCCCTCTGAGATGCACACTGCCCACTGCAGAAGACTGTAGAGAGGAGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | GAGTGCTTGGCATCCAATCTCCTCTCTACAGTCTTCTaGAGTGGGCAGTGTGCATCTCAGAGGGCGTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ECLASNLLSTVF*SGQCASQRASS Trigger: GCTCGACGCCCTCTGAGATGCACACTGCCCACTGCAGAAGACTGTAGAGAGGAGATTGGATGCCAAGCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | GACTCCAGGAGTCCTGAAAGGGACAAACACTCAGACTaGTCTACGGCCGTCACCTGCTGTTTGCGACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: DSRSPERDKHSD*STAVTCCLRQM Trigger: CATCTGTCGCAAACAGCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTCCCTTTCAGGACTCCTGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | GGAGTCTCTGTAGACCAGACTGTCCTGGAACATGTCTaGAACACAGGGACCCGCCTGCCTCTATCTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: GVSVDQTVLEHV*NTGTRLPLSIT Trigger: GGTGATAGATAGAGGCAGGCGGGTCCCTGTGTTTCAGACATGTTCCAGGACAGTCTGGTCTACAGAGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | CACATCCCATCCCATCCCATCCCATCCCACCTGCTGTaGGGTTCAGATCGCTTTACAAGGATAATGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HIPSHPIPSHLL*GSDRFTRIMCR Trigger: CCTGCACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGGATGGGATGGGATGGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | GTCCCTGTCACAAACTGCCACTTGATGCCAGGAAGATaGACTTCTCTAGGGAGCCTAGAAAGAGGGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPVTNCHLMPGR*TSLGSLERGAQ Trigger: CTGAGCCCCTCTTTCTAGGCTCCCTAGAGAAGTTCATCTTCCTGGCATCAAGTGGCAGTTTGTGACAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | TTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCTTaGGAGAGTATGGTCTTGTGCACCGCCCCAGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTLTVPDSLQTP*ESMVLCTAPEG Trigger: TCCCTCTGGGGCGGTGCACAAGACCATACTCTCCCAAGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | AGCATCTTTGCCACTACGCCATGTGGCCTAAGATCCTaGCAAAAACTAGCAACCACAGGCCCATCCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SIFATTPCGLRS*QKLATTGPSLS Trigger: GGAAAGGGATGGGCCTGTGGTTGCTAGTTTTTGCCAGGATCTTAGGCCACATGGCGTAGTGGCAAAGATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACATACATCAGCCTCTGCTCCCACAAGGGCAGCGGAAGCCAAGCAGGGACTCAACTTCCGAAATGACTaGGGATATGTGAGCAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: KHTSASAPTRAAEAKQGLNFRND*GYVSKT Trigger: GGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTT...GAGTCCCTGCTTGGCTTCCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGTGTAGGTCAGCATCTTaGCCACTACGCCATGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NRQCVWGVCVCVLKETKQCRSAS*PLRHVA Trigger: GGCCACATGGCGTAGTGGCAAAGATGCTGACCTACA...CTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | TCCGCCTCGGCGTCTGAATTACACTTAAGACTTTGCTaGCAAACATACATCAGCCTCTGCTCCCACAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SASASELHLRLC*QTYISLCSHKG Trigger: GCCCTTGTGGGAGCAGAGGCTGATGTATGTTTGTCAGCAAAGTCTTAAGTGTAATTCAGACGCCGAGGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | GGCTCAAAGTCACCCTGTTCCCATCAACTTCCGAAATaGCTTGGGATATGTGAGCAAGACCAACGCGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSKSPCSHQLPK*LGICEQDQRAW Trigger: CCAAGCGCGTTGGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTTGATGGGAACAGGGTGACTTTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | CACCGCCCCAGAGGGAATGTGTATTCTATGAGTGAGTaGTTGGCATCCAATCTCCTCTCTACAGTCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HRPRGNVYSMSE*LASNLLSTVFC Trigger: GCAGAAGACTGTAGAGAGGAGATTGGATGCCAAGCACTCACTCATAGAATACACATTCCCTCTGGGGCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGCGGAGCTGCATCCTATaGAAACAATGGCTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASNSGQQISCTHIRFPSSRSCIL*KQWLCL Trigger: CAGACAGAGCCATTGTTTCAATAGGATGCAGCTCCG...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGCTCGCCAACTTTTTGTaGCCTATCTTCAGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASNSGQQISCTHIRFPSSLANFL*PIFSAG Trigger: CCCAGCACTGAAGATAGGCAACAAAAAGTTGGCGAG...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | AAGGCAAACAGCGACTCCTGCTGCTTGACTCGGATATaGACACCTATGTGCCCGAAAACCCAGAGACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: KANSDSCCLTRI*TPMCPKTQRQQ Trigger: TTGTTGTCTCTGGGTTTTCGGGCACATAGGTGTTCATATCCGAGTCAAGCAGCAGGAGTCGCTGTTTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | TGGCCCACCATCCTGGACGTCTCGCCAACTTTTTGTTaGCTATCTTCAGTGCTGGGGAACCTTTATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WPTILDVSPTFC*LSSVLGNLYFC Trigger: ACAGAAATAAAGGTTCCCCAGCACTGAAGATAGGCAACAAAAAGTTGGCGAGACGTCCAGGATGGTGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | AACACTCAGACTGGTCTACGGCCGTCACCTGCTGTTTaGGACAGATGCTACTGTAGGCTTCATATAACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NTQTGLRPSPAV*DRCYCRLHITS Trigger: GGAAGTTATATGAAGCCTACAGTAGCATCTGTCGCAAACAGCAGGTGACGGCCGTAGACCAGTCTGAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | GAGAAAAGCAAAGACTCAGACAGTTCATCCCAGGCATaGTTTGCTCCCAAGCACTTAGCCAGGTACGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: EKSKDSDSSSQA*FAPKHLARYEC Trigger: GCATTCGTACCTGGCTAAGTGCTTGGGAGCAAACCATGCCTGGGATGAACTGTCTGAGTCTTTGCTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | GGAAATGTAGGTCAGCATCTTTGCCACTACGCCATGTaGCCTAAGATCCTGGCAAAAACTAGCAACCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GNVGQHLCHYAM*PKILAKTSNHR Trigger: CCTGTGGTTGCTAGTTTTTGCCAGGATCTTAGGCCACATGGCGTAGTGGCAAAGATGCTGACCTACATTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGCGGAGCTGCATCCTATaGAAACAATGGCTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NRQCVWGVCVCVLKETKQRSCIL*KQWLCL Trigger: CAGACAGAGCCATTGTTTCAATAGGATGCAGCTCCG...CTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | GTCCAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATaGCCTTTAACTCTTGACTCTATTTCCCAAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VQASSSSLCSKG*PLTLDSISQVL Trigger: CAGCACTTGGGAAATAGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAAACGACCTTACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGTTCCCGGTGAAAGCTTaGCCGTTCAGGACATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPNDLTKMKILGALKCQWFPVKA*PFRTCS Trigger: AGAGCATGTCCTGAACGGCAAAGCTTTCACCGGGAA...CCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGTAAGGTCGTTTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATCTGTAAATGCAATCTTGGCTAGAAGCCAGGGAGGATACAGCCCAGTCCCAGGACAATCTTTACAGTaGTGCTCGTTAACCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: ESVNAILARSQGGYSPVPGQSLQ*CSLTLT Trigger: TGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCC...TGGGACTGGGCTGTATCCTCCCTGGCTTCTAGCCAAGATTGCATTTACAGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | ATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTaGAGGAAACAAAACAGTCCACAGAAAGCCCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: IDSVCGVCVCVC*RKQNSPQKALF Trigger: AAATAGGGCTTTCTGTGGACTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | CAAGCCTCACATCTGTTCTCAATCCCATTCGGTCTCTaGTTCCCATCAGTCTTCGGACAATCTTTACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QASHLFSIPFGL*FPSVFGQSLQL Trigger: CAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAGAGACCGAATGGGATTGAGAACAGATGTGAGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | GTGTCTTCAAAAGGAGGAAATGTAGGTCAGCATCTTTaGCACTACGCCATGTGGCCTAAGATCCTGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSSKGGNVGQHL*HYAMWPKILAK Trigger: TTTTGCCAGGATCTTAGGCCACATGGCGTAGTGGCAAAGATGCTGACCTACATTTCCTCCTTTTGAAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR GCA 72 bp | TGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTaGTCGTTAACCCTTACAGTTCCAGACTCTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CFPSVFGQSLQL*SLTLTVPDSLQ Trigger: TTGGAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTAACCCTTACGGACAATCTTTACAGTaGTGCTCGTTAACCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LLPISLRTIFTVVLVNPYGQSLQ*CSLTLT Trigger: TGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCC...GTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR TCA 72 bp | GGCTGGGATTTAAGGGTGTGTACTACCAAGGCCCGATaGGAAGGTATTTTCTTATTAACCTCTGAAAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: GWDLRVCTTKAR*EGIFLLTSENL Trigger: TAGGTTTTCAGAGGTTAATAAGAAAATACCTTCTCATCGGGCCTTGGTAGTACACACCCTTAAATCCCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| 3UTR CCA 72 bp | ACACAATGCCCTTCCACGGAGGCTCGTAAATTTTCCTaGATCATTCCATTTCATCCTTCTAAACTTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQCPSTEARKFS*IIPFHPSKLQS Trigger: ACTTTGAAGTTTAGAAGGATGAAATGGAATGATCCAGGAAAATTTACGAGCCTCCGTGGAAGGGCATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | GACTTGGGATATGTGAGCAAGACCAACGCGCTTGGGGACCGGCGACTCGCTGGGTTGCGGGCACAGAACTaGATCGCAGCACTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLGYVSKTNALGDRRLAGLRAQN*IAALSR Trigger: TCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAA...CCCAGCGAGTCGCCGGTCCCCAAGCGCGTTGGTCTTGCTCACATATCCCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | ATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGACCTTTGCTGTCCAGCTaGTCCATCTCGTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: IGGGEAAPLWAGSYYGHRPLLSS*SISSNT Trigger: GGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGG...TCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGAACTCCTGAGCAATAGCTaGGAACACAGCCTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SEAGRPLLFGQDPTMDTELLSNS*EHSLGT Trigger: AGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAG...TTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | ATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGGACACAGATCCCGACCAATCTCCTaGGCAATAGCTGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: IGGGEAAPLWAGSYYGHRSRPIS*AIAGNT Trigger: TGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGA...TCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCCCTCAAAACCACCCTTGCCCGGGCCACACTTTCAAAGCGGCGTTTCCGGCGGACATTTCTaGTCAGGATCTGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSKPPLPGPHFQSGVSGGHF*SGSALL Trigger: GAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGA...AACGCCGCTTTGAAAGTGTGGCCCGGGCAAGGGTGGTTTTGAGGGAAGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | CGGGCCACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACGACAAACACTCAGACTaGTCTACGGCCGTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RATLSKRRCNGALWCPCHDKHSD*STAVTC Trigger: GCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTC...GTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGTGGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| 3UTR CAA 72 bp | CCTCAACTACATCGGAGGCGGGGAGGCCGCTCCTCTTaGGGCAGGATCCTACTATGGACACAGAACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLHRRRGGRSS*GRILLWTQNRQ Trigger: CTGTCTGTTCTGTGTCCATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATGTAGTTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | CGGGCCACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACGGACTGTCTGGCTCCTaGCATCCGACTCCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RATLSKRRCNGALWCPCHGLSGS*HPTPQF Trigger: AAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCC...GTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGTGGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCAGGAGTCCTGAAAGGGACAAACACTCAGACTGGTCTACGGCCGTCACCCATGGGGCCTTTCTCTaGTGTCAAGTGCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSRSPERDKHSDWSTAVTHGAFL*CQVLFQ Trigger: CTGGAAAAGCACTTGACAGCAGAGAAAGGCCCCATG...GGTGACGGCCGTAGACCAGTCTGAGTGTTTGTCCCTTTCAGGACTCCTGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCAGGAGTCCTGAAAGGGACAAACACTCAGACTGGTCTACGGCCGTCACCAAACAGCAGACACTTTaGGGGCACAGAACTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: DSRSPERDKHSDWSTAVTKQQTL*GHRTGS Trigger: CGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTT...GGTGACGGCCGTAGACCAGTCTGAGTGTTTGTCCCTTTCAGGACTCCTGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR CAA 72 bp | GTTAACCCTTACAGTTCCAGACTCTCTCCAAACTCCTaGGGAGAGTATGGTCTTGTGCACCGCCCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNPYSSRLSPNS*GEYGLVHRPRG Trigger: CCCTCTGGGGCGGTGCACAAGACCATACTCTCCCAAGGAGTTTGGAGAGAGTCTGGAACTGTAAGGGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | AAACATACATCAGCCTCTGCTCCCACAAGGGCAGCGGAAGCCAAGCAGGGACTCAGCCTTTTACTTCCTTaGAGTCTTGCAGAATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHTSASAPTRAAEAKQGLSLLLP*SLAESG Trigger: GCCGGATTCTGCAAGACTTCAAGGAAGTAAAAGGCT...GAGTCCCTGCTTGGCTTCCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCCCTCAAAACCACCCTTGCCCGGGCCACACTTTCAAAGCGGCGTTGCTGTTTGCGACAGATaGTACTGTAGGCTTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSKPPLPGPHFQSGVAVCDR*YCRLHI Trigger: TATATGAAGCCTACAGTAGCATCTGTCGCAAACAGC...AACGCCGCTTTGAAAGTGTGGCCCGGGCAAGGGTGGTTTTGAGGGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| CDS-3UTR CCA 90 bp | CTCAACTACATCGGAGGCGGGGAGGCCGCTCCTCTTTGGGCAGGATCCTACTATGTGGTGGGTACAGGCTaGACGTTTCTAAGTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LNYIGGGEAAPLWAGSYYVVGTG*TFLSFT Trigger: AGTAAAACTTAGAAACGTCCAGCCTGTACCCACCAC...ATAGTAGGATCCTGCCCAAAGAGGAGCGGCCTCCCCGCCTCCGATGTAGTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGGGAGGATACAGCCCAGTCCCACTGAGAGTCAAACCCTGTTCCTGACTACACCAACACGATCATaGGGCCTTTCTCTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGRIQPSPTESQTLFLTTPTRS*GLSLLS Trigger: TGACAGCAGAGAAAGGCCCCATGATCGTGTTGGTGT...AGTCAGGAACAGGGTTTGACTCTCAGTGGGACTGGGCTGTATCCTCCCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGTTGCGGGCACAGAACTaGATCGCAGCACTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSKRRCNGALWCPCHKLLRAQN*IAALSR Trigger: TCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAA...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATATGACACCCATCTCCTaGTCTCTGGCAGGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: REILHQSLKSPGQQHLSHMTPIS*SLAGSR Trigger: TCGGCTGCCTGCCAGAGAGCAGGAGATGGGTGTCAT...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGCCTCGCCTGGAGAAAAGCAAAGACTCAGACAGTTCATCCCAGGCATGCAGAAAGGTAGAGACTaGCAGCTTTCTTCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAASPGEKQRLRQFIPGMQKGRD*QLSSHR Trigger: TCTGTGGGAAGAAAGCTGGCAGTCTCTACCTTTCTG...CATGCCTGGGATGAACTGTCTGAGTCTTTGCTTTTCTCCAGGCGAGGCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | TCCCATCCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCCGTCACCTGCTGTTTaGGACAGATGCTACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPIPPAVGFRSLYKDNVPSPAV*DRCYCR Trigger: CCTACAGTAGCATCTGTCGCAAACAGCAGGTGACGG...CACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGGATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGCAGGCTACACCAACACGATCATaGGGCCTTTCTCTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPPAVGFRSLYKDNVQATPTRS*GLSLLS Trigger: TGACAGCAGAGAAAGGCCCCATGATCGTGTTGGTGT...AGCCTGCACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGGGTTTGAGGACTGTCTaGCTCCTGACATCCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNSGQQISCTHIRFPSSGLRTV*LLTSDS Trigger: GGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACC...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAGCAGCTGCCCACAGTGTGGAAACAAACTGTAAAGCAGTCACGTCTCTTGGTTTGAGGACTGTCTaGCTCCTGACATCCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTAAAHSVETNCKAVTSLGLRTV*LLTSDS Trigger: GGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACC...AAGAGACGTGACTGCTTTACAGTTTGTTTCCACACTGTGGGCAGCTGCTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGGCTGCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCTTTGCTGTCCAGCTaGTCCATCTCGTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: CAGCIKQWPTDLLYPYQIPLLSS*SISSNT Trigger: GGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGG...AATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGCAGCCTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | ACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGGAGGGACACCTGCAACCGTCACCTGCTGTTTaGGACAGATGCTACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKMKILGALKCQWEGHLQPSPAV*DRCYCR Trigger: CCTACAGTAGCATCTGTCGCAAACAGCAGGTGACGG...TTGCAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATGGCCTTTAACTCTTGACTCTGGTTTGAGGACTGTCTaGCTCCTGACATCCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QASSSSLCSKGWPLTLDSGLRTV*LLTSDS Trigger: GGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACC...AGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCATCCCACAAGGCCCCTaGACTCCAGGAGTCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLIPQGP*TPGVLK Trigger: TTTCAGGACTCCTGGAGTCCAGGGGCCTTGTGGGAT...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| 3UTR CAA 72 bp | CAAAGTCACCCTGTTCCCATCAACTTCCGAAATGACTaGGGATATGTGAGCAAGACCAACGCGCTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSHPVPINFRND*GYVSKTNALGD Trigger: GTCCCCAAGCGCGTTGGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTTGATGGGAACAGGGTGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGTCTGGGATCTGGTTTaGGGCATGATGGCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: REILHQSLKSPGQQHLSHVWDLV*GMMATQ Trigger: TTGTGTGGCCATCATGCCTCAAACCAGATCCCAGAC...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
||
| CDS-3UTR TCA 90 bp | ATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGGAGGGACACCTGCAAGTGCCAAAGTGCCTTCTTGCTTaGACAGTCTTATACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: MKILGALKCQWEGHLQVPKCLLA*TVLYTQ Trigger: CTGTGTGTATAAGACTGTTCAAGCAAGAAGGCACTT...TGGCACTTGCAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAGAATCTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | AATCGACAGTGTGTGTGGGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGATAACCGGGGAGTGTTaGACAGGTTGTCATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQCVWGVCVCVLKETKQITGEC*TGCHRP Trigger: TGGGCGATGACAACCTGTGCAACACTCCCCGGTTAT...CTGTTTTGTTTCCTTCAGCACACACACACACACACCCCACACACACTGTCGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCATAACCGGGGAGTGTTaGACAGGTTGTCATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLITGEC*TGCHRP Trigger: TGGGCGATGACAACCTGTGCAACACTCCCCGGTTAT...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGTCCACAGAAAGCCCTATATAACCGGGGAGTGTTaGACAGGTTGTCATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVCAEGNKTVHRKPYITGEC*TGCHRP Trigger: TGGGCGATGACAACCTGTGCAACACTCCCCGGTTAT...ATAGGGCTTTCTGTGGACTGTTTTGTTTCCTTCAGCACACACACACACACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTAGGAATATGACACCCATCTCCTaGTCTCTGGCAGGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HTLSNTSPYILVGTVFRNMTPIS*SLAGSR Trigger: TCGGCTGCCTGCCAGAGAGCAGGAGATGGGTGTCAT...ATTCCTAAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GGGACAAACACTCAGACTGGTCTACGGCCGTCACCTGCTGTTTGCGACAGATGCTTCTCTGCTGTCAAGTaGTTTTCCAGTTTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GTNTQTGLRPSPAVCDRCFSAVK*FSSFLI Trigger: GATGAGAAAACTGGAAAAGCACTTGACAGCAGAGAA...GCATCTGTCGCAAACAGCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGATCACAGGCATAAAAGTCACCACACCCAGCTACTCGGTCATTTTTATGACAAACACTCAGACTaGTCTACGGCCGTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWDHRHKSHHTQLLGHFYDKHSD*STAVTC Trigger: GCAGGTGACGGCCGTAGACCAGTCTGAGTGTTTGTC...ATAAAAATGACCGAGTAGCTGGGTGTGGTGACTTTTATGCCTGTGATCCCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| 3UTR CAA 72 bp | ATGGCCCACCATCCTGGACGTCTCGCCAACTTTTTGTaGCCTATCTTCAGTGCTGGGGAACCTTTATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MAHHPGRLANFL*PIFSAGEPLFL Trigger: CAGAAATAAAGGTTCCCCAGCACTGAAGATAGGCAACAAAAAGTTGGCGAGACGTCCAGGATGGTGGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| 3UTR CAA 72 bp | GGTATGGCCCACCATCCTGGACGTCTCGCCAACTTTTaGTTGCCTATCTTCAGTGCTGGGGAACCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GMAHHPGRLANF*LPIFSAGEPLF Trigger: AAATAAAGGTTCCCCAGCACTGAAGATAGGCAACAAAAAGTTGGCGAGACGTCCAGGATGGTGGGCCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGCTTTTACTTCCTTCTTaGAGTCTTGCAGAATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSKRRCNGALWCPCHKLLLLPS*SLAESG Trigger: GCCGGATTCTGCAAGACTTCAAGAAGGAAGTAAAAG...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGATCACAGGCATAAAAGTCACCACACCCAGCTACTCGGTCATTTTTATTCCCGACCAATCTCCTaGGCAATAGCTGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: CWDHRHKSHHTQLLGHFYSRPIS*AIAGNT Trigger: TGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGA...ATAAAAATGACCGAGTAGCTGGGTGTGGTGACTTTTATGCCTGTGATCCCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAACGACCTTACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGCCTTTGCTGTCCAGCTaGTCCATCTCGTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: FPNDLTKMKILGALKCQWPLLSS*SISSNT Trigger: GGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGG...CCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGTAAGGTCGTTTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGTTTCTGCTCAGGATCTaGTTTGCTCTCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSKRRCNGALWCPCHKLFLLRI*FALWTS Trigger: AGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAA...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTTGTGCTCGTTAACCCTTACTCCGGCGGACATTTCTaGTCAGGATCTGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPISLRTIFTVVLVNPYSGGHF*SGSALL Trigger: GAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGA...GTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCCATGGGGCCTTTCTCTaGTGTCAAGTGCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLHGAFL*CQVLFQ Trigger: CTGGAAAAGCACTTGACAGCAGAGAAAGGCCCCATG...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGGTGGTGGGTACAGGCTaGACGTTTCTAAGTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: TLSKRRCNGALWCPCHKLVVGTG*TFLSFT Trigger: AGTAAAACTTAGAAACGTCCAGCCTGTACCCACCAC...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGTCCACAGAAAGCCCTATACCAGGATCTTCTGCTaGAGAGGAAGGGAATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVCAEGNKTVHRKPYTRIFC*RGRESC Trigger: ACAGGATTCCCTTCCTCTCCAGCAGAAGATCCTGGT...ATAGGGCTTTCTGTGGACTGTTTTGTTTCCTTCAGCACACACACACACACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| CDS-3UTR TCA 90 bp | GAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGAAGGACTGTCTGGCTCCTaGCATCCGACTCCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: EILHQSLKSPGQQHLSHEGLSGS*HPTPQF Trigger: AAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCC...TTCATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | ACACTTTCAAAGCGGCGTTGTAATGGTGCCCTCTGGTGTCCCTGTCACAAACTGCATCAACTTCCGAAATaGCTTGGGATATGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSKRRCNGALWCPCHKLHQLPK*LGICEQ Trigger: TTGCTCACATATCCCAAGTCATTTCGGAAGTTGATG...CAGTTTGTGACAGGGACACCAGAGGGCACCATTACAACGCCGCTTTGAAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
||
| CDS-3UTR GCA 90 bp | TCCCATCCCATCCCACCTGCTGTGGGGTTCAGATCGCTTTACAAGGATAATGTGTTCTTCCCACAGATGTaGTCCTTCAGAAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHPIPPAVGFRSLYKDNVFFPQM*SFRKFL Trigger: CAGGAATTTTCTGAAGGAGCACATCTGTGGGAAGAA...CACATTATCCTTGTAAAGCGATCTGAACCCCACAGCAGGTGGGATGGGATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTTCCCGACCAATCTCCTaGGCAATAGCTGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLSNTSPYILVGTVFSRPIS*AIAGNT Trigger: TGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGA...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATGGCCTTTAACTCTTGACTCTTTTCTGCTCAGGATCTaGTTTGCTCTCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QASSSSLCSKGWPLTLDSFLLRI*FALWTS Trigger: AGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAA...AGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTAGGAATCATGGGGCCTTTCTCTaGTGTCAAGTGCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTLSNTSPYILVGTVFRNHGAFL*CQVLFQ Trigger: CTGGAAAAGCACTTGACAGCAGAGAAAGGCCCCATG...ATTCCTAAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCTCCTGAGCAATAGCTaGGAACACAGCCTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQLLSNS*EHSLGT Trigger: AGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAG...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGTTGCGGGCACAGAACTaGATCGCAGCACTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQLRAQN*IAALSR Trigger: TCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAA...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR CAA 72 bp | CTCTGCTTCCCATCAGTCTTCGGACAATCTTTACAGTaGTGCTCGTTAACCCTTACAGTTCCAGACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCFPSVFGQSLQ*CSLTLTVPDSL Trigger: GAGAGAGTCTGGAACTGTAAGGGTTAACGAGCACAACTGTAAAGATTGTCCGAAGACTGATGGGAAGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTTCAGAGACACCTTGGTaGGGCGGCTCTCCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLSNTSPYILVGTVFSETPW*GGSPYF Trigger: AAAATAAGGAGAGCCGCCTCACCAAGGTGTCTCTGA...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | CCACACCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATAAACAGCAGACACTTTaGGGGCACAGAACTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: PHPATRSFLWVKPVRTKDKQQTL*GHRTGS Trigger: CGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTT...ATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGGTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTCAAACCAGGATCTTCTaGTGGAGAGGAAGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCQTRIF*WRGRES Trigger: GGATTCCCTTCCTCTCCAGCAGAAGATCCTGGTTTG...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATACACCAACACGATCATaGGGCCTTTCTCTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPATRSFLWVKPVRTKDTPTRS*GLSLLS Trigger: TGACAGCAGAGAAAGGCCCCATGATCGTGTTGGTGT...ATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGGTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCACTTGATGCCAGGAAGATGAACTTCTCTAGGGAGCCTAGAAAGAGGCAGCTATCTGATTCCTaGTATAAGGTGGGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPLDARKMNFSREPRKRQLSDS*YKVGSS Trigger: TGAACTTCCCACCTTATACCAGGAATCAGATAGCTG...CCTCTTTCTAGGCTCCCTAGAGAAGTTCATCTTCCTGGCATCAAGTGGCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAACAATGGCTCTGTCTGAGGGAAGCTAACCCTGAGGCAAAGTGTGAGAGACAGCTATCTGATTCCTaGTATAAGGTGGGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQWLCLREANPEAKCERQLSDS*YKVGSS Trigger: TGAACTTCCCACCTTATACCAGGAATCAGATAGCTG...TCTCTCACACTTTGCCTCAGGGTTAGCTTCCCTCAGACAGAGCCATTGTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR CCA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTACCAGGATCTTCTGCTaGAGAGGAAGGGAATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLSNTSPYILVGTVFTRIFC*RGRESC Trigger: ACAGGATTCCCTTCCTCTCCAGCAGAAGATCCTGGT...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR TCA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTCCACACAAACTTGTATaGTGCCAGAAGTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCPHKLV*CQKSVS Trigger: GGAGACAGACTTCTGGCATCATACAAGTTTGTGTGG...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
||
| CDS-3UTR TCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAAGGACTGTCTGGCTCCTaGCATCCGACTCCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKGLSGS*HPTPQF Trigger: AAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCC...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGATCACAGGCATAAAAGTCACCACACCCAGCTACTCGGTCATTTTTATTCCTTCTTGAAGTCTTaGAGAATCCGGCTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CWDHRHKSHHTQLLGHFYSFLKS*RIRLKQ Trigger: CTGTTTAAGCCGGATTCTGCAAGACTTCAAGAAGGA...ATAAAAATGACCGAGTAGCTGGGTGTGGTGACTTTTATGCCTGTGATCCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATTTCTCTGCTGTCAAGTaGTTTTCCAGTTTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: REILHQSLKSPGQQHLSHFSAVK*FSSFLI Trigger: GATGAGAAAACTGGAAAAGCACTTGACAGCAGAGAA...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCGGGAAGTTCAATAACTaGGGCTTACAGTTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLGKFNN*GLQFSL Trigger: TAGAGAAAACTGTAAGCCGCAGTTATTGAACTTCCC...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATTTGCCGTTCAGGACATaGTCTATTTCCTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: REILHQSLKSPGQQHLSHLPFRT*SISFSS Trigger: TGAAGAAAAGGAAATAGAGCATGTCCTGAACGGCAA...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR TCA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTATCTGGTTTGAGGCATaGTGGCCACACAAACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCIWFEA*WPHKLV Trigger: TACAAGTTTGTGTGGCCATCATGCCTCAAACCAGAT...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
||
| CDS-3UTR TCA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTCTTTTACTTCCTTCTTaGAGTCTTGCAGAATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YIHTLSNTSPYILVGTVFLLLPS*SLAESG Trigger: GCCGGATTCTGCAAGACTTCAAGAAGGAAGTAAAAG...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | GAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGAAGCTGTTTGCGACAGATaGTACTGTAGGCTTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: EILHQSLKSPGQQHLSHEAVCDR*YCRLHI Trigger: TATATGAAGCCTACAGTAGCATCTGTCGCAAACAGC...TTCATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | GAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGAAACTTCCTTGAAGTCTTaGAGAATCCGGCTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: EILHQSLKSPGQQHLSHETSLKS*RIRLKQ Trigger: CTGTTTAAGCCGGATTCTGCAAGACTTCAAGGAAGT...TTCATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTAAGTGCCTTCTTGCTTaGACAGTCTTATACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCKCLLA*TVLYTQ Trigger: CTGTGTGTATAAGACTGTTCAAGCAAGAAGGCACTT...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | CCACACCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATCATCAACTTCCGAAATaGCTTGGGATATGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHPATRSFLWVKPVRTKDHQLPK*LGICEQ Trigger: TTGCTCACATATCCCAAGTCATTTCGGAAGTTGATG...ATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGGTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTATCCGGCGGACATTTCTaGTCAGGATCTGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVSGGHF*SGSALL Trigger: GAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGA...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTTCCTTCTTGAAGTCTTaGAGAATCCGGCTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCSFLKS*RIRLKQ Trigger: CTGTTTAAGCCGGATTCTGCAAGACTTCAAGAAGGA...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATCAGCTATCTGATTCCTaGTATAAGGTGGGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPATRSFLWVKPVRTKDQLSDS*YKVGSS Trigger: TGAACTTCCCACCTTATACCAGGAATCAGATAGCTG...ATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGGTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR TCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTATCAGAGACACCTTGGTaGGGCGGCTCTCCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVSETPW*GGSPYF Trigger: AAAATAAGGAGAGCCGCCTCACCAAGGTGTCTCTGA...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | TTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCCAGCGCTAACACTCATGTTCTTCCCACAGATGTaGTCCTTCAGAAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMGKTSKNQRYQPALTLMFFPQM*SFRKFL Trigger: CAGGAATTTTCTGAAGGAGCACATCTGTGGGAAGAA...CATGAGTGTTAGCGCTGGCTGATATCTTTGGTTCTTACTGGTTTTACCCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTAAAACAGCAGACACTTTaGGGGCACAGAACTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVKQQTL*GHRTGS Trigger: CGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTT...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTACAAACCAGGATCTTCTaGTGGAGAGGAAGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVQTRIF*WRGRES Trigger: GGATTCCCTTCCTCTCCAGCAGAAGATCCTGGTTTG...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTACAGAAAGGTAGAGACTaGCAGCTTTCTTCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVQKGRD*QLSSHR Trigger: TCTGTGGGAAGAAAGCTGGCAGTCTCTACCTTTCTG...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | TTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCCAGCGCTAACACTCATGTTCTCTGCTGTCAAGTaGTTTTCCAGTTTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FMGKTSKNQRYQPALTLMFSAVK*FSSFLI Trigger: GATGAGAAAACTGGAAAAGCACTTGACAGCAGAGAA...CATGAGTGTTAGCGCTGGCTGATATCTTTGGTTCTTACTGGTTTTACCCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGGGGAAGTTCAATAACTaGGGCTTACAGTTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQGKFNN*GLQFSL Trigger: TAGAGAAAACTGTAAGCCGCAGTTATTGAACTTCCC...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGTTGCCGTTCAGGACATaGTCTATTTCCTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQLPFRT*SISFSS Trigger: TGAAGAAAAGGAAATAGAGCATGTCCTGAACGGCAA...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR GCA 90 bp | AATAATAATGACAAACCAGGATACACACACCCCAGTGTCTTCAAAAGGAGGAAAGGGAAGTTCAATAACTaGGGCTTACAGTTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NNNDKPGYTHPSVFKRRKGKFNN*GLQFSL Trigger: TAGAGAAAACTGTAAGCCGCAGTTATTGAACTTCCC...TTTCCTCCTTTTGAAGACACTGGGGTGTGTGTATCCTGGTTTGTCATTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| CDS-3UTR CCA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTGGTGGGTACAGGCTaGACGTTTCTAAGTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LNIALKRATVFILTESHVVVGTG*TFLSFT Trigger: AGTAAAACTTAGAAACGTCCAGCCTGTACCCACCAC...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| 3UTR CAA 72 bp | CTGGGGAACCTTTATTTCTGTGCATTAGAACATTCCTaGTATTTAGTTGAAGTCACCGTCTGTATAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGNLYFCALEHS*YLVEVTVCIAY Trigger: GTAAGCTATACAGACGGTGACTTCAACTAAATACAAGGAATGTTCTAATGCACAGAAATAAAGGTTCCCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| CDS TCA 90 bp | AAGTCCTTCCCAGCTGGTCTGCACAGCTCCTCCCGACCAATCTCCTaGGCAATAGCTGGGAACACAGCCTGGGCACTCCTCAGGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: KSFPAGLHSSSRPIS*AIAGNTAWALLRDM Trigger: CATGTCCCTGAGGAGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGAGGAGCTGTGCAGACCAGCTGGGAAGGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 90 bp | AGCTGGTCTGCACAGCTCCTCCCGACCAATCTCCTGAGCAATAGCTaGGAACACAGCCTGGGCACTCCTCAGGGACATGCAATTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWSAQLLPTNLLSNS*EHSLGTPQGHAIQQ Trigger: CTGCTGAATTGCATGTCCCTGAGGAGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGAGGAGCTGTGCAGACCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 90 bp | TATGTGAGCAAGACCAACGCGCTTGGGGACCGGCGACTCGCTGGGTaGTTTACATTCGGAGAGTGGTTTGAGGACTGTCTGGCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YVSKTNALGDRRLAG*FTFGEWFEDCLAPD Trigger: GTCAGGAGCCAGACAGTCCTCAAACCACTCTCCGAATGTAAATCACCCAGCGAGTCGCCGGTCCCCAAGCGCGTTGGTCTTGCTCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS-3UTR CAA 90 bp | CCCAGCACATCCCATCCCATCCCATCCCATCCCACCTGCTGTGGGGTTCAGATCCTTTCTTGCCCAGCTTaGGTGGAGAACAGGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: PSTSHPIPSHPTCCGVQILSCPA*VENREI Trigger: TATCTCCCTGTTCTCCACCAAAGCTGGGCAAGAAAG...GATCTGAACCCCACAGCAGGTGGGATGGGATGGGATGGGATGGGATGTGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| CDS GCA 90 bp | CCACAGATGTGCTCCTTCAGAAAATTCCTGATGACACCCATCTCCTaGTCTCTGGCAGGCAGCCGATCCGGGACAGCTGTATTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: PQMCSFRKFLMTPIS*SLAGSRSGTAVFRT Trigger: CGTCCTGAATACAGCTGTCCCGGATCGGCTGCCTGCCAGAGAGCAGGAGATGGGTGTCATCAGGAATTTTCTGAAGGAGCACATCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 90 bp | CTCCTTCTCCGGCGGACATTTCTGCTCAGGATCTGCTTTGCTCTCTaGACTTCTTTGAGCGGAGGAGGAACGTATCTGGTGTTGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRRTFLLRICFAL*TSLSGGGTYLVLAN Trigger: GTTCGCCAACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGAGAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | ATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGGAGGGACACCTGCAAGTGCCATTCCCGGTGAAAGCTTaGCCGTTCAGGACATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKILGALKCQWEGHLQVPFPVKA*PFRTCS Trigger: AGAGCATGTCCTGAACGGCAAAGCTTTCACCGGGAA...TGGCACTTGCAGGTGTCCCTCCCACTGGCATTTGAGAGCCCCCAGAATCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS-3UTR CAA 90 bp | GGGTGTGTGTGTGTGTGTGCTGAAGGAAACAAAACAGTCCACAGAAAGCCCTATCCCAGGGTGACCTCTTaGATTTTCAGCCGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCVCVCAEGNKTVHRKPYPRVTS*IFSRRV Trigger: GACCCGGCGGCTGAAAATCAAAGAGGTCACCCTGGG...ATAGGGCTTTCTGTGGACTGTTTTGTTTCCTTCAGCACACACACACACACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
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| CDS TCA 90 bp | GGCGGACATTTCTGCTCAGGATCTGCTTTGCTCTCTGGACTTCTTTaGGCGGAGGAGGAACGTATCTGGTGTTGGCGAACTCTGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGHFCSGSALLSGLL*AEEERIWCWRTLSC Trigger: ACAAGACAGAGTTCGCCAACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 90 bp | GCGGGCACAGAACTGGATCGCAGCACTGTCCAGAACCTGGTCTTTTaGCACCTGACTAAGTCGATCCTGCAAGATGGCAGCTATCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: AGTELDRSTVQNLVF*HLTKSILQDGSYLI Trigger: AATCAGATAGCTGCCATCTTGCAGGATCGACTTAGTCAGGTGTCAAAAGACCAGGTTCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 90 bp | TTCTATAGCTCGCCTGCAAACATCCAGCGCTTTACGGATGTCTCCTaGAACAGCAGACACTTTGCGGGCACAGAACTGGATCGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: FYSSPANIQRFTDVS*NSRHFAGTELDRST Trigger: AGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGCTGGATGTTTGCAGGCGAGCTATAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS GCA 90 bp | ACACAGACTCCTTCTCCGGCGGACATTTCTGCTCAGGATCTGCTTTaGTCTCTGGACTTCTTTGAGCGGAGGAGGAACGTATCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TQTPSPADISAQDLL*SLDFFERRRNVSGV Trigger: AACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGAGAAGGAGTCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS GCA 90 bp | AAACATCCAGCGCTTTACGGATGTCTCCTGAAACAGCAGACACTTTaGGGGCACAGAACTGGATCGCAGCACTGTCCAGAACCTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KHPALYGCLLKQQTL*GHRTGSQHCPEPGL Trigger: AAGACCAGGTTCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGCTGGATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 90 bp | TGCTGTCAAGTGCTTTTCCAGTTTTCTCATCAAGTCCTTCCCAGCTaGTCTGCACAGCTCCTCCCGACCAATCTCCTGAGCAATAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCQVLFQFSHQVLPS*SAQLLPTNLLSNSW Trigger: CCAGCTATTGCTCAGGAGATTGGTCGGGAGGAGCTGTGCAGACCAGCTGGGAAGGACTTGATGAGAAAACTGGAAAAGCACTTGACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GCAGCAGCCTCGCCTGGAGAAAAGCAAAGACTCAGACAGTTCATCCCAGGCATGAAAACCGATGGTAGCTaGTGTCTGGGATCTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAASPGEKQRLRQFIPGMKTDGS*CLGSGL Trigger: CAAACCAGATCCCAGACACAAGCTACCATCGGTTTT...CATGCCTGGGATGAACTGTCTGAGTCTTTGCTTTTCTCCAGGCGAGGCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCGATAACCGGGGAGTGTaGCACAGGTTGTCATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLDNRGV*HRLSSP Trigger: GGGCGATGACAACCTGTGCAACACTCCCCGGTTATC...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GCATCAAACAGTGGCCAACAGATCTCCTGTACCCATATCAGATTCCCAAGCTCGCAGGACGAGCTTGGCTaGCTGATAGCAAGTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASNSGQQISCTHIRFPSSQDELG*LIASAF Trigger: GAAGGCACTTGCTATCAGCAAGCCAAGCTCGTCCTG...CGAGCTTGGGAATCTGATATGGGTACAGGAGATCTGTTGGCCACTGTTTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000133779.9 |
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| CDS CCA 90 bp | GACTCGCTGGGTGATTTACATTCGGAGAGTGGTTTGAGGACTGTCTaGCTCCTGACATCCGACTCCACAATTTCTATAGCTCGCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DSLGDLHSESGLRTV*LLTSDSTISIARLQ Trigger: TTGCAGGCGAGCTATAGAAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACCACTCTCCGAATGTAAATCACCCAGCGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS-3UTR CAA 90 bp | TGCTGGGATCACAGGCATAAAAGTCACCACACCCAGCTACTCGGTCATTTTTATGATAACCGGGGAGTGTaGCACAGGTTGTCATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CWDHRHKSHHTQLLGHFYDNRGV*HRLSSP Trigger: GGGCGATGACAACCTGTGCAACACTCCCCGGTTATC...ATAAAAATGACCGAGTAGCTGGGTGTGGTGACTTTTATGCCTGTGATCCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS GCA 90 bp | TTAGCCACGGCCACTCAAACAGTGTGTATAATACATCCTGCCCTTTaGTGTCCAGCTGATCCATCTCGTCCAACACCAACACGATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LATATQTVCIIHPAL*CPADPSRPTPTRSW Trigger: CCATGATCGTGTTGGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGGGCAGGATGTATTATACACACTGTTTGAGTGGCCGTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CAA 90 bp | CGGGAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGGAGTGTTGCACAGGTaGTCATCGCCCAGACGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: REILHQSLKSPGQQHLSHGVLHR*SSPRRF Trigger: AAAACGTCTGGGCGATGACAACCTGTGCAACACTCC...ATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATGGCCTTTAACTCTTGACTCTGAAACAGCAGACACTTaGCGGGCACAGAACTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: QASSSSLCSKGWPLTLDSETADT*RAQNWI Trigger: GATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTC...AGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CAA 90 bp | GGCCACTGTTTTTATTCTTACAGAGTCTCATGTAGTCCAGGCCAGCTCAAGCTCGAAACAGCAGACACTTaGCGGGCACAGAACTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GHCFYSYRVSCSPGQLKLETADT*RAQNWI Trigger: GATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTC...GAGCTTGAGCTGGCCTGGACTACATGAGACTCTGTAAGAATAAAAACAGTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CAA 90 bp | TACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTCCCAGGGTGACCTCTTaGATTTTCAGCCGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YIHTLSNTSPYILVGTVFPRVTS*IFSRRV Trigger: GACCCGGCGGCTGAAAATCAAAGAGGTCACCCTGGG...AAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
||
| CDS TCA 90 bp | CACTCAAACAGTGTGTATAATACATCCTGCCCTTTGCTGTCCAGCTaGTCCATCTCGTCCAACACCAACACGATCATGGGGCCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSNSVYNTSCPLLSS*SISSNTNTIMGPFS Trigger: AGAGAAAGGCCCCATGATCGTGTTGGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGGGCAGGATGTATTATACACACTGTTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS CCA 90 bp | CTTTGCTGTCCAGCTGATCCATCTCGTCCAACACCAACACGATCATaGGGCCTTTCTCTGCTGTCAAGTGCTTTTCCAGTTTTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LCCPADPSRPTPTRS*GLSLLSSAFPVFSS Trigger: TGATGAGAAAACTGGAAAAGCACTTGACAGCAGAGAAAGGCCCCATGATCGTGTTGGTGTTGGACGAGATGGATCAGCTGGACAGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
||
| CDS-3UTR CAA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGATAACCGGGGAGTGTaGCACAGGTTGTCATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCDNRGV*HRLSSP Trigger: GGGCGATGACAACCTGTGCAACACTCCCCGGTTATC...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGAACAGGACGAGCTTGGCTaGCTGATAGCAAGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: EILHQSLKSPGQQHLSHEQDELG*LIASAF Trigger: GAAGGCACTTGCTATCAGCAAGCCAAGCTCGTCCTG...TTCATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | CAGGCCAGCTCAAGCTCACTATGTAGCAAAGGATGGCCTTTAACTCTTGACTCTAAAACCGATGGTAGCTaGTGTCTGGGATCTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: QASSSSLCSKGWPLTLDSKTDGS*CLGSGL Trigger: CAAACCAGATCCCAGACACAAGCTACCATCGGTTTT...AGAGTCAAGAGTTAAAGGCCATCCTTTGCTACATAGTGAGCTTGAGCTGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | TTTCCAAACGACCTTACTAAAATGAAGATTCTGGGGGCTCTCAAATGCCAGTGGGGAGTGTTGCACAGGTaGTCATCGCCCAGACGTTTT | + |
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Preference number: 5 (lower is better) Translates to: FPNDLTKMKILGALKCQWGVLHR*SSPRRF Trigger: AAAACGTCTGGGCGATGACAACCTGTGCAACACTCC...CCACTGGCATTTGAGAGCCCCCAGAATCTTCATTTTAGTAAGGTCGTTTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | CAGACAGCAGCTGCCCACAGTGTGGAAACAAACTGTAAAGCAGTCACGTCTCTTAACTTCCGAAATGACTaGGGATATGTGAGCAAGACC | + |
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Preference number: 5 (lower is better) Translates to: QTAAAHSVETNCKAVTSLNFRND*GYVSKT Trigger: GGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTT...AAGAGACGTGACTGCTTTACAGTTTGTTTCCACACTGTGGGCAGCTGCTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092706.13 |
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| CDS-3UTR CAA 90 bp | CACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTAGGAATCTTTCTTGCCCAGCTTaGGTGGAGAACAGGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: HTLSNTSPYILVGTVFRNLSCPA*VENREI Trigger: TATCTCCCTGTTCTCCACCAAAGCTGGGCAAGAAAG...ATTCCTAAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCAGGACGAGCTTGGCTaGCTGATAGCAAGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQQDELG*LIASAF Trigger: GAAGGCACTTGCTATCAGCAAGCCAAGCTCGTCCTG...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GAGATTCTTCATCAGTCCTTAAAAAGTCCAGGGCAGCAACACCTGTCACATGAAAAAACCGATGGTAGCTaGTGTCTGGGATCTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: EILHQSLKSPGQQHLSHEKTDGS*CLGSGL Trigger: CAAACCAGATCCCAGACACAAGCTACCATCGGTTTT...TTCATGTGACAGGTGTTGCTGCCCTGGACTTTTTAAGGACTGATGAAGAATCTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | GTAATACATACACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTCTTTCTTGCCCAGCTTaGGTGGAGAACAGGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: VIHTHTLQHKSVYTRRHCLSCPA*VENREI Trigger: TATCTCCCTGTTCTCCACCAAAGCTGGGCAAGAAAG...ACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | CCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGTTCCCGGTGAAAGCTTaGCCGTTCAGGACATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PSYSVIFMGKTSKNQRYQFPVKA*PFRTCS Trigger: AGAGCATGTCCTGAACGGCAAAGCTTTCACCGGGAA...CTGATATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS-3UTR CAA 90 bp | CACACACTCTCCAACACAAGTCCGTATATACTCGTAGGCACTGTGTTTAGGAATCCTTTTACTTCCTTCTaGAAGTCTTGCAGAATCCGG | + |
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Preference number: 5 (lower is better) Translates to: HTLSNTSPYILVGTVFRNPFTSF*KSCRIR Trigger: CCGGATTCTGCAAGACTTCAAGAAGGAAGTAAAAGG...ATTCCTAAACACAGTGCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS-3UTR CAA 90 bp | CCACACCCAGCTACTCGGTCATTTTTATGGGTAAAACCAGTAAGAACCAAAGATCCTTTTACTTCCTTCTaGAAGTCTTGCAGAATCCGG | + |
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Preference number: 5 (lower is better) Translates to: PHPATRSFLWVKPVRTKDPFTSF*KSCRIR Trigger: CCGGATTCTGCAAGACTTCAAGAAGGAAGTAAAAGG...ATCTTTGGTTCTTACTGGTTTTACCCATAAAAATGACCGAGTAGCTGGGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS-3UTR CAA 90 bp | TTTATGGGTAAAACCAGTAAGAACCAAAGATATCAGCCAGCGCTAACACTCATGAAGCCTTTTACTTCCTaGAAGTCTTGCAGAATCCGG | + |
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Preference number: 5 (lower is better) Translates to: FMGKTSKNQRYQPALTLMKPFTS*KSCRIR Trigger: CCGGATTCTGCAAGACTTCAAGGAAGTAAAAGGCTT...CATGAGTGTTAGCGCTGGCTGATATCTTTGGTTCTTACTGGTTTTACCCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133779.9 |
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| CDS-3UTR CAA 90 bp | CTGAACATTGCTTTAAAAAGGGCCACTGTTTTTATTCTTACAGAGTCTCATGTAAACTTCCGAAATGACTaGGGATATGTGAGCAAGACC | + |
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Preference number: 5 (lower is better) Translates to: LNIALKRATVFILTESHVNFRND*GYVSKT Trigger: GGTCTTGCTCACATATCCCAAGTCATTTCGGAAGTT...TACATGAGACTCTGTAAGAATAAAAACAGTGGCCCTTTTTAAAGCAATGTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS TCA 72 bp | CCAGCTGGTCTGCACAGCTCCTCCCGACCAATCTCCTaGGCAATAGCTGGGAACACAGCCTGGGCACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PAGLHSSSRPIS*AIAGNTAWALL Trigger: GAGGAGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGAGGAGCTGTGCAGACCAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | GCACAGCTCCTCCCGACCAATCTCCTGAGCAATAGCTaGGAACACAGCCTGGGCACTCCTCAGGGACATGCA | + |
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Preference number: 6 (lower is better) Translates to: AQLLPTNLLSNS*EHSLGTPQGHA Trigger: TGCATGTCCCTGAGGAGTGCCCAGGCTGTGTTCCCAGCTATTGCTCAGGAGATTGGTCGGGAGGAGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 72 bp | GGCGACTCGCTGGGTGATTTACATTCGGAGAGTGGTTaGAGGACTGTCTGGCTCCTGACATCCGACTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GDSLGDLHSESG*RTVWLLTSDST Trigger: TGTGGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACCACTCTCCGAATGTAAATCACCCAGCGAGTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS GCA 72 bp | CCTTCTCCGGCGGACATTTCTGCTCAGGATCTGCTTTaGTCTCTGGACTTCTTTGAGCGGAGGAGGAACGTA | + |
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Preference number: 6 (lower is better) Translates to: PSPADISAQDLL*SLDFFERRRNV Trigger: TACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCGGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS GCA 72 bp | GCGCTTTACGGATGTCTCCTGAAACAGCAGACACTTTaGGGGCACAGAACTGGATCGCAGCACTGTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ALYGCLLKQQTL*GHRTGSQHCPE Trigger: TTCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | CGGCGGACATTTCTGCTCAGGATCTGCTTTGCTCTCTaGACTTCTTTGAGCGGAGGAGGAACGTATCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRTFLLRICFAL*TSLSGGGTYLV Trigger: CACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | GTGCTTTTCCAGTTTTCTCATCAAGTCCTTCCCAGCTaGTCTGCACAGCTCCTCCCGACCAATCTCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLFQFSHQVLPS*SAQLLPTNLLS Trigger: GCTCAGGAGATTGGTCGGGAGGAGCTGTGCAGACCAGCTGGGAAGGACTTGATGAGAAAACTGGAAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 72 bp | AGCGCTTTACGGATGTCTCCTGAAACAGCAGACACTTaGCGGGCACAGAACTGGATCGCAGCACTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SALRMSPETADT*RAQNWIAALSR Trigger: TCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 90 bp | CGGCGGACATTTCTGCTCAGGATCTGCTTTGCTCTCTGGACTTCTTaGAGCGGAGGAGGAACGTATCTGGTGTTGGCGAACTCTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RRTFLLRICFALWTS*SGGGTYLVLANSVL Trigger: CAAGACAGAGTTCGCCAACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAATGTCCGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 90 bp | CAAACATCCAGCGCTTTACGGATGTCTCCTGAAACAGCAGACACTTaGCGGGCACAGAACTGGATCGCAGCACTGTCCAGAACCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QTSSALRMSPETADT*RAQNWIAALSRTWS Trigger: AGACCAGGTTCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGCTGGATGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 72 bp | TCGCCTGCAAACATCCAGCGCTTTACGGATGTCTCCTaGAACAGCAGACACTTTGCGGGCACAGAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SPANIQRFTDVS*NSRHFAGTELD Trigger: ATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGACATCCGTAAAGCGCTGGATGTTTGCAGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | TCTCCTGAAACAGCAGACACTTTGCGGGCACAGAACTaGATCGCAGCACTGTCCAGAACCTGGTCTTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SPETADTLRAQN*IAALSRTWSFD Trigger: GTCAAAAGACCAGGTTCTGGACAGTGCTGCGATCCAGTTCTGTGCCCGCAAAGTGTCTGCTGTTTCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 90 bp | TTGGGGACCGGCGACTCGCTGGGTGATTTACATTCGGAGAGTGGTTaGAGGACTGTCTGGCTCCTGACATCCGACTCCACAATTTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: LGTGDSLGDLHSESG*RTVWLLTSDSTISI Trigger: TATAGAAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACCACTCTCCGAATGTAAATCACCCAGCGAGTCGCCGGTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS TCA 72 bp | TTCTGCTCAGGATCTGCTTTGCTCTCTGGACTTCTTTaGGCGGAGGAGGAACGTATCTGGTGTTGGCGAACT | + |
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Preference number: 6 (lower is better) Translates to: FCSGSALLSGLL*AEEERIWCWRT Trigger: AGTTCGCCAACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 72 bp | CGAGCTTGGCTTGCTGATAGCAAGTGCCTTCTTGCTTaGACAGTCTTATACACACAGACTCCTTCTCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RAWLADSKCLLA*TVLYTQTPSPA Trigger: CGCCGGAGAAGGAGTCTGTGTGTATAAGACTGTTCAAGCAAGAAGGCACTTGCTATCAGCAAGCCAAGCTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | CCAGCTGATCCATCTCGTCCAACACCAACACGATCATaGGGCCTTTCTCTGCTGTCAAGTGCTTTTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PADPSRPTPTRS*GLSLLSSAFPV Trigger: AACTGGAAAAGCACTTGACAGCAGAGAAAGGCCCCATGATCGTGTTGGTGTTGGACGAGATGGATCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 72 bp | TTTCTGCTCAGGATCTGCTTTGCTCTCTGGACTTCTTaGAGCGGAGGAGGAACGTATCTGGTGTTGGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FLLRICFALWTS*SGGGTYLVLAN Trigger: GTTCGCCAACACCAGATACGTTCCTCCTCCGCTCAAAGAAGTCCAGAGAGCAAAGCAGATCCTGAGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS TCA 72 bp | AGTGTGTATAATACATCCTGCCCTTTGCTGTCCAGCTaGTCCATCTCGTCCAACACCAACACGATCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVYNTSCPLLSS*SISSNTNTIMG Trigger: CCCCATGATCGTGTTGGTGTTGGACGAGATGGATCAGCTGGACAGCAAAGGGCAGGATGTATTATACACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CAA 72 bp | CGGAAAACCGATGGTAGCTTGTGTCTGGGATCTGGTTaGAGGCATGATGGCCACACAAACTTGTATGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKTDGSLCLGSG*RHDGHTNLYDA Trigger: GGCATCATACAAGTTTGTGTGGCCATCATGCCTCAAACCAGATCCCAGACACAAGCTACCATCGGTTTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
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| CDS TCA 72 bp | GGAAAACCGATGGTAGCTTGTGTCTGGGATCTGGTTTaGGGCATGATGGCCACACAAACTTGTATGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKPMVACVWDLV*GMMATQTCMMP Trigger: TGGCATCATACAAGTTTGTGTGGCCATCATGCCTCAAACCAGATCCCAGACACAAGCTACCATCGGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
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| CDS CCA 72 bp | AGTTTTACGTCCACACACGGAGTGGTGGGTACAGGCTaGACGTTTCTAAGTTTTACTTCACAATCCCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFTSTHGVVGTG*TFLSFTSQSRE Trigger: TTCCCGGGATTGTGAAGTAAAACTTAGAAACGTCCAGCCTGTACCCACCACTCCGTGTGTGGACGTAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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| CDS CCA 72 bp | GGTGATTTACATTCGGAGAGTGGTTTGAGGACTGTCTaGCTCCTGACATCCGACTCCACAATTTCTATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDLHSESGLRTV*LLTSDSTISIA Trigger: AGCTATAGAAATTGTGGAGTCGGATGTCAGGAGCCAGACAGTCCTCAAACCACTCTCCGAATGTAAATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 |
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| CDS CAA 72 bp | CTGGGATCTGGTTTGAGGCATGATGGCCACACAAACTaGTATGATGCCAGAAGTCTGTCTCCATTTATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSGLRHDGHTN*YDARSLSPFIS Trigger: AGAAATAAATGGAGACAGACTTCTGGCATCATACAAGTTTGTGTGGCCATCATGCCTCAAACCAGATCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
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| CDS CAA 90 bp | AGCTTGTGTCTGGGATCTGGTTTGAGGCATGATGGCCACACAAACTaGTATGATGCCAGAAGTCTGTCTCCATTTATTTCTATAATACTT | + |
|
Preference number: 6 (lower is better) Translates to: SLCLGSGLRHDGHTN*YDARSLSPFISIIL Trigger: AAGTATTATAGAAATAAATGGAGACAGACTTCTGGCATCATACAAGTTTGTGTGGCCATCATGCCTCAAACCAGATCCCAGACACAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093937.3 |
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| CDS CAA 72 bp | TGGACGTTTCTAAGTTTTACTTCACAATCCCGGGAATaGGGTTTCTTCAGGGTATTAGATAGCTTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WTFLSFTSQSRE*GFFRVLDSFFF Trigger: GAAAAAGAAGCTATCTAATACCCTGAAGAAACCCAATTCCCGGGATTGTGAAGTAAAACTTAGAAACGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092706.13 ENSMUST00000093937.3 ENSMUST00000133779.9 |
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