Pregenerated sensors for CDC5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023932Ensembl transcript IDs: ENSMUST00000024727.10
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTaGCTGAGTAGGAAACCAGCAACTCGATCTCCTGTGGCAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TVLGNLSMKRKLSSA*LSRKPATRSPVAEH Trigger: ATGCTCTGCCACAGGAGATCGAGTTGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| 3UTR-3UTR CCA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCAACTCGATCTCCTGTaGCAGAGCATCCACTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ETTVLGNLSMKRKLSSALQLDLL*QSIHCA Trigger: AGCACAGTGGATGCTCTGCCACAGGAGATCGAGTTG...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGTGGCCTGGCCTACCTTaGCAACTTCCTGGAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLSMKRKLSSALLSRWPGLP*QLPGVQ Trigger: CTGAACTCCAGGAAGTTGTCAAGGTAGGCCAGGCCA...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | AACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAACCAGCAGGTCCTCCACTGCGTTaGCATCAGCTTGGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NLSMKRKLSSALLSRKPAGPPLR*HQLGQV Trigger: CACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACC...TGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAAGGCCATGAGGTTCTaGGCTTCCTGTAGAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: TTVLGNLSMKRKLSSALLKAMRF*ASCRIL Trigger: CAGGATTCTACAGGAAGCTCAGAACCTCATGGCCTT...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGACTGTATTTGGAGTCTaGACAACTTGCCGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TTVLGNLSMKRKLSSALLTVFGV*TTCRCG Trigger: CCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGT...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAAAGCTCTCGTCTTTTCTaGAGGGCAGCAAGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGNLSMKRKLSSALLSRKSSRLF*RAARRL Trigger: CAGGCGCCTTGCTGCCCTCCAGAAAAGACGAGAGCT...TTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGCTGGAGAGTTCGCCATaGCTCATTCCTTGTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: TTVLGNLSMKRKLSSALLLESSP*LIPCLT Trigger: GGTCAAACAAGGAATGAGCCATGGCGAACTCTCCAG...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCGTACCATCTGGCTTTaGACTGCTTTGCCGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ETTVLGNLSMKRKLSSALRTIWL*TALPIS Trigger: GGAAATCGGCAAAGCAGTGCAAAGCCAGATGGTACG...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGGGTTGTAAGCTTCACTaGAGAGTTCGCCATGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VLGNLSMKRKLSSALLSRGCKLH*RVRHGS Trigger: TGAGCCATGGCGAACTCTCCAGTGAAGCTTACAACC...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | AACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAACCAGCACTGCTGTTCTTCCTATaGTCGGAGCAATGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLSMKRKLSSALLSRKPALLFFL*SEQWSS Trigger: GGAGGACCATTGCTCCGATCATAGGAAGAACAGCAG...TGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGGGCAGATCCTTCTaGACAGCTTTATGCATTCGT | + |
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Preference number: 4 (lower is better) Translates to: ETTVLGNLSMKRKLSSALLGRSF*TALCIR Trigger: ACGAATGCATAAAGCTGTTCAGAAGGATCTGCCCAG...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | CTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAATCCGCGTATCTCTGCTaGAGCTCTTTCTCTCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LGNLSMKRKLSSALLSRKSAYLC*SSFSRS Trigger: GGAACGAGAGAAAGAGCTTCAGCAGAGATACGCGGA...TTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGGAGAAGTCACTCTCATaGAGTGGGGTATTAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ETTVLGNLSMKRKLSSALEKSLS*SGVLSP Trigger: TGGGCTTAATACCCCACTGCATGAGAGTGACTTCTC...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGACAGAACTGTATTTaGAGTCTGCACAACTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TTVLGNLSMKRKLSSALLRQNCI*SLHNLP Trigger: CGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCT...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGTCTTTGCAGCTCTCTTaGCTTCTGTTGTCATGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TTVLGNLSMKRKLSSALLSLQLS*LLLSCD Trigger: GTCACATGACAACAGAAGCCAAGAGAGCTGCAAAGA...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| 3UTR CAA 72 bp | GGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTaGCTGAGTAGGAAACCAGCAACTCGATCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GNLSMKRKLSSA*LSRKPATRSPV Trigger: CACAGGAGATCGAGTTGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAATTCCAAGCACTGGGCTaGTGTTCTTCCTATGATCGG | + |
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Preference number: 4 (lower is better) Translates to: LGNLSMKRKLSSALLSRKFQALG*CSSYDR Trigger: CCGATCATAGGAAGAACAGCAGCCCAGTGCTTGGAA...TTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGGGTGGCATTAGTGACTaGTTTAGGAGTTGTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ETTVLGNLSMKRKLSSALGGISD*FRSCST Trigger: AGTGGAACAACTCCTAAACCAGTCACTAATGCCACC...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGATAGGTAATGTGCTCTaGATTGTTGGTAGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: VLGNLSMKRKLSSALLSRIGNVL*IVGSKP Trigger: GGGTTTGCTACCAACAATTCAGAGCACATTACCTAT...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTAGCCATTCGTACCATCTaGCTTTGCACTGCTTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVAIRTI*LCTALP Trigger: CGGCAAAGCAGTGCAAAGCCAGATGGTACGAATGGC...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAAGCGACTTCACTGGCCTaGCCTACCTTGACAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQATSLA*PTLTTS Trigger: GGAAGTTGTCAAGGTAGGCCAGGCCAGTGAAGTCGC...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAACCTGTCTTGAGAGGCTaGTGTCCGTGGTGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQPVLRG*CPWCSQ Trigger: CTGAGAACACCACGGACACCAGCCTCTCAAGACAGG...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAAGCAATGGTCCTCCACTaGGTTGGCATCAGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKAMVLH*VGISLA Trigger: GGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGC...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTAGCGTTGGCATCAGCTTaGCCAGGTGCAAGAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVALASA*PGARVF Trigger: AAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGC...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAAAGAGTTTGTTATTCCTaGCTCCTCCGCCGTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKRVCYS*LLRRLP Trigger: CGGCAGACGGCGGAGGAGTCAGGAATAACAAACTCT...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | AACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAACCAGCATTTGCCGATTTCCTATaGAGCAATGAGGCAATCCTA | + |
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Preference number: 4 (lower is better) Translates to: NLSMKRKLSSALLSRKPAFADFL*SNEAIL Trigger: TAGGATTGCCTCATTGCTGCATAGGAAATCGGCAAA...TGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTAGGCTTTGCACTGCTTTaGCGATTTCCTATGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVGFALL*RFPMQQ Trigger: TTGCTGCATAGGAAATCGGCAAAGCAGTGCAAAGCC...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGCAACTGCTTTTCTCTTaGTTTCCTTTTAGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VLGNLSMKRKLSSALLSRQLLFS*FPFSLL Trigger: AAGAAGGCTAAAAGGAAAGCAAGAGAAAAGCAGTTG...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAAGGGGTCACTGTAGTCTaGCATTCCATCCTCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQGVTVV*HSILWI Trigger: AATCCAGAGGATGGAATGGCAGACTACAGTGACCCC...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGTTTTCAGATCTTCTTTaGAGAACTTCTCATAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGNLSMKRKLSSALLSRFSDLL*RTSHKG Trigger: GCCCTTATGAGAAGTTCTCCAAAGAAGATCTGAAAA...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTAGGCTCATTCCTTGTTTaGCCACTTCCATCTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVGSFLV*PLPSLV Trigger: TACAAGAGATGGAAGTGGTCAAACAAGGAATGAGCC...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTAAATCTCTATGCCAGCTaGTCGAAGCTCTCGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVNLYAS*SKLSSF Trigger: AAAAGACGAGAGCTTCGAGCAGCTGGCATAGAGATT...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAACGTTCCTGTTGCCGCTaGACATCTTCTTTTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQRSCCR*TSSFRH Trigger: GTGTCTAAAAGAAGATGTGCAGCGGCAACAGGAACG...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAACTTGGTCTCTGGGTTTaGATCTATCTCTCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQLGLWV*IYLSRL Trigger: AAGCCTGGAGAGATAGATCCAAACCCAGAGACCAAG...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | TGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCATCTTTCCTTGAGTATTaGCCAGACGGGCTCGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CNTERKDQYHSKQTTEKPSFLEY*PDGLEP Trigger: AGGCTCGAGCCCGTCTGGCCAATACTCAAGGAAAGA...TGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGTTTCCTATGCAGCAATaGGGCAATCCTAGACCACTG | + |
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Preference number: 4 (lower is better) Translates to: QVCNTERKDQYHSKQTTEFPMQQ*GNPRPL Trigger: CAGTGGTCTAGGATTGCCTCATTGCTGCATAGGAAA...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTACTTCTTTTCCATCTTTaGAGCTCTCTTGGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVLLFHL*SSLGFC Trigger: ACAGAAGCCAAGAGAGCTGCAAAGATGGAAAAGAAG...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTATTTTTCCTTTTCTTCTaGATCTCTATGCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVFFLFF*ISMPAA Trigger: AGCAGCTGGCATAGAGATTCAGAAGAAAAGGAAAAA...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAATCTTCTGAATCTCTATaGCAGCTGCTCGAAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKSSESL*QLLEAL Trigger: GAGAGCTTCGAGCAGCTGGCATAGAGATTCAGAAGA...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | TGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACCATCAAGATCCTGCTaGCGCAGTTTCCTGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: CNTERKDQYHSKQTTEKPPSRSC*RSFLKS Trigger: AGATTTCAGGAAACTGCGGCAGCAGGATCTTGATGG...TGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAATCTTCATTGTCCCTTTaGGCAGTTTTGTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKSSLSL*AVLSRR Trigger: CCTCCTGGACAAAACTGCCCAAAGGGACAATGAAGA...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAGCCCACCTTTCAATaGAGTGTCCACATTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QVCNTERKDQYHSKQTTEKPTFQ*SVHIGQ Trigger: TTGACCAATGTGGACACTCCATTGAAAGGTGGGCTT...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR TCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACGATGCTGTTGTTTGTaGCATTGTACTCAGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKRCCCL*HCTQTG Trigger: TCCTGTCTGAGTACAATGTCACAAACAACAGCATCG...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAAATCAGCTTGGCCAGGTaGAAGAGTTTTTCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKISLAR*KSFSSS Trigger: AGAGGAAGAAAAACTCTTGCACCTGGCCAAGCTGAT...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGCAGTTTCCTGAAATCTaGATCAAGGGCCTGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QVCNTERKDQYHSKQTTEQFPEI*IKGLVI Trigger: AATTACCAGGCCCTTGATGCAGATTTCAGGAAACTG...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGCATAAGTCATTCAACTaGTTCATGAGCCCCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCNTERKDQYHSKQTTEHKSFN*FMSPIA Trigger: TGCTATGGGGCTCATGAAGCAGTTGAATGACTTATG...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CCA 90 bp | GTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAAACCTTGACAACTTCCTaGAGTTCAGCATCTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VCNTERKDQYHSKQTTEKTLTTS*SSASEI Trigger: GATTTCAGATGCTGAACTCCAGGAAGTTGTCAAGGT...TTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR GCA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAAATATTTCATTACCGCTaGTTTCAGAATTTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQIFHYR*FQNFIL Trigger: GAGGATGAAATTCTGAAAGCAGCGGTAATGAAATAT...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | AGAGTGCTAGAAGCAGAGTTTGTTATTCCTGACTCCTCCGCCGTCTaGCGTGCGACTTCACTGGCCTGGCCTACCTTGACAACTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLEAEFVIPDSSAV*RATSLAWPTLTTSW Trigger: CCAGGAAGTTGTCAAGGTAGGCCAGGCCAGTGAAGTCGCACGGCAGACGGCGGAGGAGTCAGGAATAACAAACTCTGCTTCTAGCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGTCAGGCCGGGCTGGCTaGGTCTCTGGGTTTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: TTVLGNLSMKRKLSSALLSGRAG*VSGFGS Trigger: AGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGA...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | GGAGGAACTCATAGTGTTCCAAGCACTGGGCTGCTGTTCTTCCTATaGTCGGAGCAATGGTCCTCCACTGCGTTGGCATCAGCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGTHSVPSTGLLFFL*SEQWSSTALASAWP Trigger: TGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCCCAGTGCTTGGAACACTATGAGTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | ATTGTACTCAGACAGGAGAGTGCTAGAAGCAGAGTTTGTTATTCCTaGCTCCTCCGCCGTCTGCCGTGCGACTTCACTGGCCTGGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: IVLRQESARSRVCYS*LLRRLPCDFTGLAY Trigger: GTAGGCCAGGCCAGTGAAGTCGCACGGCAGACGGCGGAGGAGTCAGGAATAACAAACTCTGCTTCTAGCACTCTCCTGTCTGAGTACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | ATCCATGTCTATCGGGTCAGGCCGGGCTGGCTTGGTCTCTGGGTTTaGATCTATCTCTCCAGGCTTAAGCTTTCGGGGGTCATCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IHVYRVRPGWLGLWV*IYLSRLKLSGVICC Trigger: ACAACAGATGACCCCCGAAAGCTTAAGCCTGGAGAGATAGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGACCCGATAGACATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | CACTGGGCTGCTGTTCTTCCTATGATCGGAGCAATGGTCCTCCACTaGGTTGGCATCAGCTTGGCCAGGTGCAAGAGTTTTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HWAAVLPMIGAMVLH*VGISLARCKSFSSS Trigger: AGAGGAAGAAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | GGCAGTTTTGTCCAGGAGGAACTCATAGTGTTCCAAGCACTGGGCTaGTGTTCTTCCTATGATCGGAGCAATGGTCCTCCACTGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFVQEELIVFQALG*CSSYDRSNGPPLRW Trigger: CCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCCCAGTGCTTGGAACACTATGAGTTCCTCCTGGACAAAACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | CTGGAGGGCAGCAAGGCGCCTGGCTTCTTCCAACTGCTTTTCTCTTaGTTTCCTTTTAGCCTTCTTTCCTTGAGTATTGGCCAGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEGSKAPGFFQLLFS*FPFSLLSLSIGQTG Trigger: GCCCGTCTGGCCAATACTCAAGGAAAGAAGGCTAAAAGGAAAGCAAGAGAAAAGCAGTTGGAAGAAGCCAGGCGCCTTGCTGCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | GTCCTGAAAGGGGTAGACAGAACTGTATTTGGAGTCTGCACAACTTaGCGCTGTGGGGTCACACCAGAGAAGTCACTCTCATGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLKGVDRTVFGVCTT*RCGVTPEKSLSCSG Trigger: CCCACTGCATGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | TGCACAACTTGCCGCTGTGGGGTCACACCAGAGAAGTCACTCTCATaGAGTGGGGTATTAAGCCCACCTTTCAATGGAGTGTCCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: CTTCRCGVTPEKSLS*SGVLSPPFNGVSTL Trigger: CAATGTGGACACTCCATTGAAAGGTGGGCTTAATACCCCACTGCATGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | GGCTGCTGTTCTTCCTATGATCGGAGCAATGGTCCTCCACTGCGTTaGCATCAGCTTGGCCAGGTGCAAGAGTTTTTCTTCCTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCCSSYDRSNGPPLR*HQLGQVQEFFFLFS Trigger: AGAGAAGAGGAAGAAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | CATCTCAAGTTCATCCTCATCCATGTCTATCGGGTCAGGCCGGGCTaGCTTGGTCTCTGGGTTTGGATCTATCTCTCCAGGCTTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLKFILIHVYRVRPG*LGLWVWIYLSRLKL Trigger: AAGCTTAAGCCTGGAGAGATAGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGACCCGATAGACATGGATGAGGATGAACTTGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | AGGGGTAGACAGAACTGTATTTGGAGTCTGCACAACTTGCCGCTGTaGGGTCACACCAGAGAAGTCACTCTCATGCAGTGGGGTATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRQNCIWSLHNLPL*GHTREVTLMQWGIK Trigger: CTTAATACCCCACTGCATGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | AGCTCCATTAGAAGGAGTCCTGAAAGGGGTAGACAGAACTGTATTTaGAGTCTGCACAACTTGCCGCTGTGGGGTCACACCAGAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSIRRSPERGRQNCI*SLHNLPLWGHTREV Trigger: GACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGACTCCTTCTAATGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGTTTAGCCTTCTTTCCTaGAGTATTGGCCAGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTVLGNLSMKRKLSSALLFSLLS*SIGQTG Trigger: GCCCGTCTGGCCAATACTCAAGGAAAGAAGGCTAAA...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | ACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAATGGAGTGTCCACATaGGTCAAGGCCATGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTVLGNLSMKRKLSSALLNGVST*VKAMRF Trigger: GAACCTCATGGCCTTGACCAATGTGGACACTCCATT...CAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | TTAGAAGGAGTCCTGAAAGGGGTAGACAGAACTGTATTTGGAGTCTaGACAACTTGCCGCTGTGGGGTCACACCAGAGAAGTCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEGVLKGVDRTVFGV*TTCRCGVTPEKSLS Trigger: TGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGACTCCTTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | AGAGAAGTCACTCTCATGCAGTGGGGTATTAAGCCCACCTTTCAATaGAGTGTCCACATTGGTCAAGGCCATGAGGTTCTGAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: REVTLMQWGIKPTFQ*SVHIGQGHEVLSFL Trigger: CAGGAAGCTCAGAACCTCATGGCCTTGACCAATGTGGACACTCCATTGAAAGGTGGGCTTAATACCCCACTGCATGAGAGTGACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | GGTTGTAAGCTTCACTGGAGAGTTCGCCATGGCTCATTCCTTGTTTaGCCACTTCCATCTCTTGTACCAGAGCATCCTGGGCCTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCKLHWRVRHGSFLV*PLPSLVPEHPGPFS Trigger: TGAAAAAGGCCCAGGATGCTCTGGTACAAGAGATGGAAGTGGTCAAACAAGGAATGAGCCATGGCGAACTCTCCAGTGAAGCTTACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGAGGAAGATAGAGGACTaGACTGTAGCATTCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ETTVLGNLSMKRKLSSALRKIED*TVAFLP Trigger: TGGGAGGAATGCTACAGTCAAGTCCTCTATCTTCCT...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | GCCTGTAAAGTCTCTTTCTCCATCAGCAAATCCGCGTATCTCTGCTaGAGCTCTTTCTCTCGTTCCTGTTGCCGCTGCACATCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ACKVSFSISKSAYLC*SSFSRSCCRCTSSF Trigger: AAAAGAAGATGTGCAGCGGCAACAGGAACGAGAGAAAGAGCTTCAGCAGAGATACGCGGATTTGCTGATGGAGAAAGAGACTTTACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | AACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAACCAGCATCGTACCATCTGGCTTaGCACTGCTTTGCCGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLSMKRKLSSALLSRKPASYHLA*HCFADF Trigger: GAAATCGGCAAAGCAGTGCAAAGCCAGATGGTACGA...TGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCACGGTGCTGGGTACTGGCCTGGCCTACCTaGACAACTTCCTGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKDQYHSKQTTEKPRCWVLAWPT*TTSWSS Trigger: TGAACTCCAGGAAGTTGTCAAGGTAGGCCAGGCCAG...TACCCAGCACCGTGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTCAGAGCGATGCTGTaGTTTGTGACATTGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETTVLGNLSMKRKLSSALLRAML*FVTLYS Trigger: TGAGTACAATGTCACAAACAACAGCATCGCTCTGAG...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | GTACCATCTGGCTTTGCACTGCTTTGCCGATTTCCTATGCAGCAATaGGGCAATCCTAGACCACTGGTTTTTCCCATATTTCATTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSGFALLCRFPMQQ*GNPRPLVFPIFHYR Trigger: GCGGTAATGAAATATGGGAAAAACCAGTGGTCTAGGATTGCCTCATTGCTGCATAGGAAATCGGCAAAGCAGTGCAAAGCCAGATGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 90 bp | AGCCATTCGTACCATCTGGCTTTGCACTGCTTTGCCGATTTCCTATaGAGCAATGAGGCAATCCTAGACCACTGGTTTTTCCCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSYHLALHCFADFL*SNEAILDHWFFPYF Trigger: GAAATATGGGAAAAACCAGTGGTCTAGGATTGCCTCATTGCTGCATAGGAAATCGGCAAAGCAGTGCAAAGCCAGATGGTACGAATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGGCAGGCAACACAAGTTaGCTTCTCTTTTTAGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGNLSMKRKLSSALLSRAGNTS*LLFLVN Trigger: GTTCACTAAAAAGAGAAGCAAACTTGTGTTGCCTGC...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGGTAATGTGCTCTGAATaGTTGGTAGCAAACCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VLGNLSMKRKLSSALLSRVMCSE*LVANPT Trigger: TGTTGGGTTTGCTACCAACAATTCAGAGCACATTAC...CCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | TTTCAGATCTTAGCTCTCCATCAAGATCCTGCTGCCGCAGTTTCCTaGAATCTGCATCAAGGGCCTGGTAATTCTCCTCAGAAGTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: FQILALHQDPAAAVS*NLHQGPGNSPQKYH Trigger: ATGATACTTCTGAGGAGAATTACCAGGCCCTTGATGCAGATTTCAGGAAACTGCGGCAGCAGGATCTTGATGGAGAGCTAAGATCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | GAAACCACGGTGCTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGGAGTCTTCATGTTTCTaGAGTTCTTCAAAAGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ETTVLGNLSMKRKLSSALESSCF*SSSKVR Trigger: ACGCACTTTTGAAGAACTCAAGAAACATGAAGACTC...CAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAGCACCGTGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CTGGCAAAGAATGAGCATCTGGATAATTTAAACCCTCATTATCCTGGAGTCCAATGGCTTTGCACTGCTTaGCCGATTTCCTATGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAKNEHLDNLNPHYPGVQWLCTA*PISYAA Trigger: TGCTGCATAGGAAATCGGCAAAGCAGTGCAAAGCCA...TTGGACTCCAGGATAATGAGGGTTTAAATTATCCAGATGCTCATTCTTTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CTGGGTAACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAAGTTGTTTCTTCTTCATaGTCCCTTTGGGCAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGNLSMKRKLSSALLSRKVVSSS*SLWAVL Trigger: CAAAACTGCCCAAAGGGACAATGAAGAAGAAACAAC...TTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTTACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | TGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCAGACCACTTCCATCTCTaGTACCAGAGCATCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CNTERKDQYHSKQTTEKPDHFHL*YQSILG Trigger: GCCCAGGATGCTCTGGTACAAGAGATGGAAGTGGTC...TGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 90 bp | TGCTTTGCCGATTTCCTATGCAGCAATGAGGCAATCCTAGACCACTaGTTTTTCCCATATTTCATTACCGCTGCTTTCAGAATTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CFADFLCSNEAILDH*FFPYFITAAFRISS Trigger: GGATGAAATTCTGAAAGCAGCGGTAATGAAATATGGGAAAAACCAGTGGTCTAGGATTGCCTCATTGCTGCATAGGAAATCGGCAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | AACTTGTCAATGAAGAGGAAGCTCAGTTCAGCCTTGCTGAGTAGGAAACCAGCATCAATTCTGTCCTTTTaGCTAGCAAGATTAGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSMKRKLSSALLSRKPASILSF*LARLAR Trigger: TCGTGCTAATCTTGCTAGCAAAAAGGACAGAATTGA...TGCTGGTTTCCTACTCAGCAAGGCTGAACTGAGCTTCCTCTTCATTGACAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGTTCTTCATTGTCCCTTaGGGCAGTTTTGTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVCNTERKDQYHSKQTTEFFIVP*GSFVQE Trigger: CTCCTGGACAAAACTGCCCAAAGGGACAATGAAGAA...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGTTCGGGGGTCATCTGTaGTTTCTTCTTCATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QVCNTERKDQYHSKQTTEFGGHL*FLLHCP Trigger: GGGACAATGAAGAAGAAACAACAGATGACCCCCGAA...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | TGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGAAACCAGCCATGGCTCATTCCTaGTTTGACCACTTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CNTERKDQYHSKQTTEKPAMAHS*FDHFHL Trigger: GAGATGGAAGTGGTCAAACAAGGAATGAGCCATGGC...TGGTTTCTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 90 bp | CTTAAAATAGTTTCATTTACTTCAGACGGCCTGGGCAGATCCTTCTaGACAGCTTTATGCATTCGTTTCATTTCCTTTACACGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKIVSFTSDGLGRSF*TALCIRFISFTRSA Trigger: TGCTGAGCGTGTAAAGGAAATGAAACGAATGCATAAAGCTGTTCAGAAGGATCTGCCCAGGCCGTCTGAAGTAAATGAAACTATTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGTAACACGGAACGCAAAGATCAGTATCATTCAAAACAAACAACTGAGATGTGCTCTGAATTGTaGGTAGCAAACCCAACATTT | + |
|
Preference number: 5 (lower is better) Translates to: QVCNTERKDQYHSKQTTEMCSEL*VANPTF Trigger: AAATGTTGGGTTTGCTACCAACAATTCAGAGCACAT...CTCAGTTGTTTGTTTTGAATGATACTGATCTTTGCGTTCCGTGTTACAGACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | ATCTCTATGCCAGCTGCTCGAAGCTCTCGTCTTTTCTaGAGGGCAGCAAGGCGCCTGGCTTCTTCCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISMPAARSSRLF*RAARRLASSNC Trigger: GCAGTTGGAAGAAGCCAGGCGCCTTGCTGCCCTCCAGAAAAGACGAGAGCTTCGAGCAGCTGGCATAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | TTCATCCTCATCCATGTCTATCGGGTCAGGCCGGGCTaGCTTGGTCTCTGGGTTTGGATCTATCTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FILIHVYRVRPG*LGLWVWIYLSR Trigger: CCTGGAGAGATAGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGACCCGATAGACATGGATGAGGATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | TCCTCATCCATGTCTATCGGGTCAGGCCGGGCTGGCTaGGTCTCTGGGTTTGGATCTATCTCTCCAGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSMSIGSGRAG*VSGFGSISPGL Trigger: TAAGCCTGGAGAGATAGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGACCCGATAGACATGGATGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | TGCCGCTGTGGGGTCACACCAGAGAAGTCACTCTCATaGAGTGGGGTATTAAGCCCACCTTTCAATGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: CRCGVTPEKSLS*SGVLSPPFNGV Trigger: CACTCCATTGAAAGGTGGGCTTAATACCCCACTGCATGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | TCGGAGCAATGGTCCTCCACTGCGTTGGCATCAGCTTaGCCAGGTGCAAGAGTTTTTCTTCCTCTTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SEQWSSTALASA*PGARVFLPLLW Trigger: CCAGAGAAGAGGAAGAAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | TCAAGTTCATCCTCATCCATGTCTATCGGGTCAGGCCGGGCTGGCTaGGTCTCTGGGTTTGGATCTATCTCTCCAGGCTTAAGCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSMSIGSGRAG*VSGFGSISPGLSFR Trigger: CCGAAAGCTTAAGCCTGGAGAGATAGATCCAAACCCAGAGACCAAGCCAGCCCGGCCTGACCCGATAGACATGGATGAGGATGAACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | CATAGTGTTCCAAGCACTGGGCTGCTGTTCTTCCTATaGTCGGAGCAATGGTCCTCCACTGCGTTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: HSVPSTGLLFFL*SEQWSSTALAS Trigger: TGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCCCAGTGCTTGGAACACTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | GCTGTTCTTCCTATGATCGGAGCAATGGTCCTCCACTaGGTTGGCATCAGCTTGGCCAGGTGCAAGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AVLPMIGAMVLH*VGISLARCKSF Trigger: AAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | GTCCAGGAGGAACTCATAGTGTTCCAAGCACTGGGCTaGTGTTCTTCCTATGATCGGAGCAATGGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VQEELIVFQALG*CSSYDRSNGPP Trigger: TGGAGGACCATTGCTCCGATCATAGGAAGAACAGCAGCCCAGTGCTTGGAACACTATGAGTTCCTCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | GGGGTAGACAGAACTGTATTTGGAGTCTGCACAACTTaGCGCTGTGGGGTCACACCAGAGAAGTCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GVDRTVFGVCTT*RCGVTPEKSLS Trigger: TGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | GTCCTGAAAGGGGTAGACAGAACTGTATTTGGAGTCTaGACAACTTGCCGCTGTGGGGTCACACCAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLKGVDRTVFGV*TTCRCGVTPEK Trigger: CTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | AGAAGGAGTCCTGAAAGGGGTAGACAGAACTGTATTTaGAGTCTGCACAACTTGCCGCTGTGGGGTCACACC | + |
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Preference number: 6 (lower is better) Translates to: RRSPERGRQNCI*SLHNLPLWGHT Trigger: GGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGACTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | TCTAAGTGGTGTTCTACCTGGGGTGGCATTAGTGACTaGTTTAGGAGTTGTTCCACTTCGGGGAGTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SKWCSTWGGISD*FRSCSTSGSQP Trigger: GGGCTGACTCCCCGAAGTGGAACAACTCCTAAACCAGTCACTAATGCCACCCCAGGTAGAACACCACTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | AGGGGTAGACAGAACTGTATTTGGAGTCTGCACAACTaGCCGCTGTGGGGTCACACCAGAGAAGTCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: RGRQNCIWSLHN*PLWGHTREVTL Trigger: GAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | ACGAGTGTAGCGGCTCTGAGCAGGAAGATAGAGGACTaGACTGTAGCATTCCTCCCACACCTGGTTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: TSVAALSRKIED*TVAFLPHLVVS Trigger: GCTTACAACCAGGTGTGGGAGGAATGCTACAGTCAAGTCCTCTATCTTCCTGCTCAGAGCCGCTACACTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | AGTCCTGAAAGGGGTAGACAGAACTGTATTTGGAGTCTGCACAACTaGCCGCTGTGGGGTCACACCAGAGAAGTCACTCTCATGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPERGRQNCIWSLHN*PLWGHTREVTLMQW Trigger: CCACTGCATGAGAGTGACTTCTCTGGTGTGACCCCACAGCGGCAAGTTGTGCAGACTCCAAATACAGTTCTGTCTACCCCTTTCAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | CTTCCTATGATCGGAGCAATGGTCCTCCACTGCGTTGGCATCAGCTaGGCCAGGTGCAAGAGTTTTTCTTCCTCTTCTCTGGACCATTCA | + |
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Preference number: 6 (lower is better) Translates to: LPMIGAMVLHCVGIS*ARCKSFSSSSLDHS Trigger: TGAATGGTCCAGAGAAGAGGAAGAAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | CACCTGGTTGTAAGCTTCACTGGAGAGTTCGCCATGGCTCATTCCTaGTTTGACCACTTCCATCTCTTGTACCAGAGCATCCTGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: HLVVSFTGEFAMAHS*FDHFHLLYQSILGL Trigger: AAGGCCCAGGATGCTCTGGTACAAGAGATGGAAGTGGTCAAACAAGGAATGAGCCATGGCGAACTCTCCAGTGAAGCTTACAACCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | GTCTCTTTCTCCATCAGCAAATCCGCGTATCTCTGCTaGAGCTCTTTCTCTCGTTCCTGTTGCCGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: VSFSISKSAYLC*SSFSRSCCRCT Trigger: TGTGCAGCGGCAACAGGAACGAGAGAAAGAGCTTCAGCAGAGATACGCGGATTTGCTGATGGAGAAAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | TCTTCCTATGATCGGAGCAATGGTCCTCCACTGCGTTaGCATCAGCTTGGCCAGGTGCAAGAGTTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSYDRSNGPPLR*HQLGQVQEFFF Trigger: GAAGAAAAACTCTTGCACCTGGCCAAGCTGATGCCAACGCAGTGGAGGACCATTGCTCCGATCATAGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | GAGGCTGGTGTCCGTGGTGTTCTCAGAGCGATGCTGTaGTTTGTGACATTGTACTCAGACAGGAGAGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: EAGVRGVLRAML*FVTLYSDRRVL Trigger: TAGCACTCTCCTGTCTGAGTACAATGTCACAAACAACAGCATCGCTCTGAGAACACCACGGACACCAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | AAGATTAGCACGAGTGTAGCGGCTCTGAGCAGGAAGATAGAGGACTaGACTGTAGCATTCCTCCCACACCTGGTTGTAAGCTTCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: KISTSVAALSRKIED*TVAFLPHLVVSFTG Trigger: TCCAGTGAAGCTTACAACCAGGTGTGGGAGGAATGCTACAGTCAAGTCCTCTATCTTCCTGCTCAGAGCCGCTACACTCGTGCTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | TTAGCTCTCCATCAAGATCCTGCTGCCGCAGTTTCCTaGAATCTGCATCAAGGGCCTGGTAATTCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LALHQDPAAAVS*NLHQGPGNSPQ Trigger: CTGAGGAGAATTACCAGGCCCTTGATGCAGATTTCAGGAAACTGCGGCAGCAGGATCTTGATGGAGAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | CTGGCCTACCTTGACAACTTCCTGGAGTTCAGCATCTaGAATCTGAGGCGCAGGCAACACAAGTTTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LAYLDNFLEFSI*NLRRRQHKFAS Trigger: AGAAGCAAACTTGTGTTGCCTGCGCCTCAGATTTCAGATGCTGAACTCCAGGAAGTTGTCAAGGTAGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CCA 72 bp | ACTCTCATGCAGTGGGGTATTAAGCCCACCTTTCAATaGAGTGTCCACATTGGTCAAGGCCATGAGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: TLMQWGIKPTFQ*SVHIGQGHEVL Trigger: CAGAACCTCATGGCCTTGACCAATGTGGACACTCCATTGAAAGGTGGGCTTAATACCCCACTGCATGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | GCCATGGCTCATTCCTTGTTTGACCACTTCCATCTCTaGTACCAGAGCATCCTGGGCCTTTTTCAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: AMAHSLFDHFHL*YQSILGLFQIF Trigger: GAAGATCTGAAAAAGGCCCAGGATGCTCTGGTACAAGAGATGGAAGTGGTCAAACAAGGAATGAGCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | GTAAGCTTCACTGGAGAGTTCGCCATGGCTCATTCCTaGTTTGACCACTTCCATCTCTTGTACCAGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: VSFTGEFAMAHS*FDHFHLLYQSI Trigger: GATGCTCTGGTACAAGAGATGGAAGTGGTCAAACAAGGAATGAGCCATGGCGAACTCTCCAGTGAAGCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | GCTGGTGTCCGTGGTGTTCTCAGAGCGATGCTGTTGTTTGTGACATaGTACTCAGACAGGAGAGTGCTAGAAGCAGAGTTTGTTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: AGVRGVLRAMLLFVT*YSDRRVLEAEFVIP Trigger: AGGAATAACAAACTCTGCTTCTAGCACTCTCCTGTCTGAGTACAATGTCACAAACAACAGCATCGCTCTGAGAACACCACGGACACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 90 bp | CTTAAGCTTTCGGGGGTCATCTGTTGTTTCTTCTTCATTGTCCCTTaGGGCAGTTTTGTCCAGGAGGAACTCATAGTGTTCCAAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: LKLSGVICCFFFIVP*GSFVQEELIVFQAL Trigger: CAGTGCTTGGAACACTATGAGTTCCTCCTGGACAAAACTGCCCAAAGGGACAATGAAGAAGAAACAACAGATGACCCCCGAAAGCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | CGTGGTGTTCTCAGAGCGATGCTGTTGTTTGTGACATaGTACTCAGACAGGAGAGTGCTAGAAGCAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: RGVLRAMLLFVT*YSDRRVLEAEF Trigger: AAACTCTGCTTCTAGCACTCTCCTGTCTGAGTACAATGTCACAAACAACAGCATCGCTCTGAGAACACCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | GGCTTTGCACTGCTTTGCCGATTTCCTATGCAGCAATaGGGCAATCCTAGACCACTGGTTTTTCCCATATTT | + |
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Preference number: 6 (lower is better) Translates to: GFALLCRFPMQQ*GNPRPLVFPIF Trigger: AAATATGGGAAAAACCAGTGGTCTAGGATTGCCTCATTGCTGCATAGGAAATCGGCAAAGCAGTGCAAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS GCA 72 bp | CCTAGACCACTGGTTTTTCCCATATTTCATTACCGCTaGTTTCAGAATTTCATCCTCCGTGTTCCTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PRPLVFPIFHYR*FQNFILRVPPH Trigger: GTGTGGAGGAACACGGAGGATGAAATTCTGAAAGCAGCGGTAATGAAATATGGGAAAAACCAGTGGTCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS CAA 72 bp | TTAAGCTTTCGGGGGTCATCTGTTGTTTCTTCTTCATaGTCCCTTTGGGCAGTTTTGTCCAGGAGGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LSFRGSSVVSSS*SLWAVLSRRNS Trigger: TGAGTTCCTCCTGGACAAAACTGCCCAAAGGGACAATGAAGAAGAAACAACAGATGACCCCCGAAAGCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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| CDS TCA 72 bp | GTTTCATTTACTTCAGACGGCCTGGGCAGATCCTTCTaGACAGCTTTATGCATTCGTTTCATTTCCTTTACA | + |
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Preference number: 6 (lower is better) Translates to: VSFTSDGLGRSF*TALCIRFISFT Trigger: TGTAAAGGAAATGAAACGAATGCATAAAGCTGTTCAGAAGGATCTGCCCAGGCCGTCTGAAGTAAATGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024727.10 |
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