Pregenerated sensors for CDC42EP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041598Ensembl transcript IDs: ENSMUST00000053536.5, ENSMUST00000106616.2, ENSMUST00000131488.2, ENSMUST00000153453.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCAGGCTGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTaGGGCTCGGATCCGTCCCAGGCTGGTGTGGTAAGGAAGGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: RPGWEQRAWKRMASR*GSDPSQAGVVRKVR Trigger: CCTAACCTTCCTTACCACACCAGCCTGGGACGGATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CCA 90 bp | CTAACATCTGGCATCCATCTGAGGCCAGGCTGGGAGCAAAGGGCCTaGAAGAGAATGGCTTCCCGCTGGGGCTCGGATCCGTCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LTSGIHLRPGWEQRA*KRMASRWGSDPSQA Trigger: AGCCTGGGACGGATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGGCCTCAGATGGATGCCAGATGTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR TCA 90 bp | GGTAGGCTCCAGACACAAGGTGAACAGAAGGGAGCCAAGTGTCCATaGCCTTGGAGAGAAGCCCACACCTGGCTTCCCTGCCATTGCGGC | + |
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Preference number: 1 (lower is better) Translates to: GRLQTQGEQKGAKCP*PWREAHTWLPCHCG Trigger: GCCGCAATGGCAGGGAAGCCAGGTGTGGGCTTCTCTCCAAGGTCATGGACACTTGGCTCCCTTCTGTTCACCTTGTGTCTGGAGCCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CCA 90 bp | GAGGGTGGCCTCTGGAAGCACAGCAGCCCATGGCTGGCCACCATCTaGCCAGACTCTGCTTGTAATCTAGCTTGCTCTCTCCCCAGATTC | + |
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Preference number: 1 (lower is better) Translates to: EGGLWKHSSPWLATI*PDSACNLACSLPRF Trigger: GAATCTGGGGAGAGAGCAAGCTAGATTACAAGCAGAGTCTGGCCAGATGGTGGCCAGCCATGGGCTGCTGTGCTTCCAGAGGCCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR GCA 90 bp | CCATGGCTGGCCACCATCTGGCCAGACTCTGCTTGTAATCTAGCTTaGTCTCTCCCCAGATTCCCACTGGCTGTGCTAGACCAGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PWLATIWPDSACNLA*SLPRFPLAVLDQGA Trigger: TGCTCCCTGGTCTAGCACAGCCAGTGGGAATCTGGGGAGAGAGCAAGCTAGATTACAAGCAGAGTCTGGCCAGATGGTGGCCAGCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR TCA 90 bp | CCCGCCACAGTCCAACCTGGGCAGGGTCTGTACACCAGATTCAGGTaGGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PATVQPGQGLYTRFR*DNSHSATKTVTSLL Trigger: CAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGGTGTACAGACCCTGCCCAGGTTGGACTGTGGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CCA 90 bp | CCTCTGGGACAGGCTGCATTTAGTGTAATAGTTGAGGCCGTCCCCTaGCTTCAGCTGAACCCCAAAGAATACCAGGCTTCAGTGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PLGQAAFSVIVEAVP*LQLNPKEYQASVRS Trigger: GCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTCAGCTGAAGCCAGGGGACGGCCTCAACTATTACACTAAATGCAGCCTGTCCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGGGGCCTGGAAGAGAATaGCTTCCCGCTGGGGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: GTNTGGGCPATVQPGQGLGPGRE*LPAGAR Trigger: CCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCC...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGTGGCACCCCAATCCCTaGGGTCCAGGGTCTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: GTNTGGGCPATVQPGQGLWHPNP*GPGSTP Trigger: TGGAGTAGACCCTGGACCTCAGGGATTGGGGTGCCA...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGTTCCGGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGCAGGGAAAAGATaGAGCCCAGAGATGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: WGFRDKHWWWLPRHSPTWAAGKR*SPEMWR Trigger: CCTCCACATCTCTGGGCTGCATCTTTTCCCTGCTGC...CCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTGGGGCTCGGATGCCACCAGGCACCAGTaGCCCTGCTACTTTACTTCC | + |
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Preference number: 2 (lower is better) Translates to: PGWEQRAWKRMASRWGSDATRHQ*PCYFTS Trigger: GGAAGTAAAGTAGCAGGGGCACTGGTGCCTGGTGGC...ATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGGGCCTGGAAGAGAATaGCTTCCCGCTGGGGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGGPGRE*LPAGAR Trigger: CCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCC...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTGGCCCAGAGCCCAAGGAGAGGCCACTAACTAGCCAAAGCGTAGCTCACTGGCACCCCAATCCCTaGGGTCCAGGGTCTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: RPGPEPKERPLTSQSVAHWHPNP*GPGSTP Trigger: TGGAGTAGACCCTGGACCTCAGGGATTGGGGTGCCA...GTGAGCTACGCTTTGGCTAGTTAGTGGCCTCTCCTTGGGCTCTGGGCCAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGCATCCTGTCCTGGGATaGAGCCTCTGGGACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLHSPPSATNSYGGGGSGHPVLG*SLWDRL Trigger: CAGCCTGTCCCAGAGGCTGCATCCCAGGACAGGATG...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGACATCTGGCATCCATCTaGGGCCAGGCTGGGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGHLASI*GQAGSK Trigger: TTTGCTCCCAGCCTGGCCTCAGATGGATGCCAGATG...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGGGAGCCAAGTGTCCATaGCCTTGGAGAGAAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VGAPVRGPVSTSGSESRRGAKCP*PWREAH Trigger: GTGGGCTTCTCTCCAAGGTCATGGACACTTGGCTCC...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCGGAGCCAAGTGTCCATaGCCTTGGAGAGAAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VSTSGSESRRVASGSTAAGAKCP*PWREAH Trigger: GTGGGCTTCTCTCCAAGGTCATGGACACTTGGCTCC...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCTGGGAGCAAAGGGCCTaGAAGAGAATGGCTTCCCGC | + |
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Preference number: 2 (lower is better) Translates to: VSTSGSESRRVASGSTAAWEQRA*KRMASR Trigger: GCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCA...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGGCTCCAGACACAAGGTaGACAGAAGGGAGCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FLHSPPSATNSYGGGGSGAPDTR*TEGSQV Trigger: CACTTGGCTCCCTTCTGTTCACCTTGTGTCTGGAGC...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCACATCCTGTCCTGGGATaGAGCCTCTGGGACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TVTQPPRRSLVSWQGILAHPVLG*SLWDRL Trigger: CAGCCTGTCCCAGAGGCTGCATCCCAGGACAGGATG...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGACTGGGATGCAGCCTCTaGGACAGGCTGCATTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGLGCSL*DRLHLV Trigger: CACTAAATGCAGCCTGTCCCAGAGGCTGCATCCCAG...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAACAAACACACCCATGGGCAGAGCTGGCCCCTTTCCTGTTCCTAGTGTCGCCACCAGGCACCAGTaGCCCTGCTACTTTACTTCC | + |
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Preference number: 2 (lower is better) Translates to: QGTNTPMGRAGPFPVPSVATRHQ*PCYFTS Trigger: GGAAGTAAAGTAGCAGGGGCACTGGTGCCTGGTGGC...GACACTAGGAACAGGAAAGGGGCCAGCTCTGCCCATGGGTGTGTTTGTTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAACACGTGAGCACCCCTaGCTCCTGCTGCATATATCT | + |
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Preference number: 2 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGTREHP*LLLHIS Trigger: AGATATATGCAGCAGGAGGCAGGGGTGCTCACGTGT...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGTGTTCGTTCCTTCTGTaGCCCATCCTGTCCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VGAPVRGPVSTSGSESRRCSFLL*PILSWD Trigger: ATCCCAGGACAGGATGGGGCACAGAAGGAACGAACA...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CAA 90 bp | GTGTCCATGACCTTGGAGAGAAGCCCACACCTGGCTTCCCTGCCATaGCGGCAGCAACTCAAACTAACATCTGGCATCCATCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VSMTLERSPHLASLP*RQQLKLTSGIHLRP Trigger: TGGCCTCAGATGGATGCCAGATGTTAGTTTGAGTTGCTGCCGCAATGGCAGGGAAGCCAGGTGTGGGCTTCTCTCCAAGGTCATGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTGGCCCAGAGCCCAAGGAGAGGCCACTAACTAGCCAAAGCGTAGCTCACCTGTTCCTAGTGTCTTaGGAGCCCAAGAAGCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: RPGPEPKERPLTSQSVAHLFLVS*EPKKLE Trigger: TTCTAGCTTCTTGGGCTCTCAAGACACTAGGAACAG...GTGAGCTACGCTTTGGCTAGTTAGTGGCCTCTCCTTGGGCTCTGGGCCAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCAACCCCTGCCTCCTGCTaGATATATCTCCTGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TVTQPPRRSLVSWQGILATPASC*IYLLGR Trigger: CCTACCCAGGAGATATATGCAGCAGGAGGCAGGGGT...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAACAAACACACCCATGGGCAGAGCTGGCCCCTTTCCTGTTCCTAGTGTCAATACCAGGCTTCAGTaGGGAGCCAGAGGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: QGTNTPMGRAGPFPVPSVNTRLQ*GARGGR Trigger: TCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATT...GACACTAGGAACAGGAAAGGGGCCAGCTCTGCCCATGGGTGTGTTTGTTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGCTGTTCCTAGTGTCTTaGGAGCCCAAGAAGCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: VGAPVRGPVSTSGSESRRLFLVS*EPKKLE Trigger: TTCTAGCTTCTTGGGCTCTCAAGACACTAGGAACAG...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCAACACGTGAGCACCCCTaGCTCCTGCTGCATATATCT | + |
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Preference number: 2 (lower is better) Translates to: TVTQPPRRSLVSWQGILATREHP*LLLHIS Trigger: AGATATATGCAGCAGGAGGCAGGGGTGCTCACGTGT...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTTGTGTGTGTACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCTTGTTTTGTGTTTTTaGGAGGCCTGGCCCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VCCVCTAGQRHSSVAQSLLVLCF*EAWPRA Trigger: GGCTCTGGGCCAGGCCTCGCAAAAACACAAAACAAG...CAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGTACACACACAACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTGCATATATCTCCTGGGTAGGCTCCAGACACAAGGTGAACAGAAGGGATGGGAGCAAAGGGCCTaGAAGAGAATGGCTTCCCGC | + |
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Preference number: 2 (lower is better) Translates to: SCCIYLLGRLQTQGEQKGWEQRA*KRMASR Trigger: GCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCA...TCCCTTCTGTTCACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTTGTGTGTGTACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGGTGAGGAGCCAGAGGTaGAAGAAGGAGGAGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: VCCVCTAGQRHSSVAQSLVRSQR*KKEELK Trigger: TTTGAGCTCCTCCTTCTTCCACCTCTGGCTCCTCAC...CAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGTACACACACAACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCGCTCCAGACACAAGGTaGACAGAAGGGAGCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PDSGEITVTQPPRRSLVSAPDTR*TEGSQV Trigger: CACTTGGCTCCCTTCTGTTCACCTTGTGTCTGGAGC...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTCCCCTGGCTTCAGCTaGACCCCAAAGAATACCAGG | + |
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Preference number: 2 (lower is better) Translates to: PDSGEITVTQPPRRSLVSSPGFS*TPKNTR Trigger: CCTGGTATTCTTTGGGGTTCAGCTGAAGCCAGGGGA...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCACCCCTGCCTCCTGCTaGATATATCTCCTGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: PDSGEITVTQPPRRSLVSTPASC*IYLLGR Trigger: CCTACCCAGGAGATATATGCAGCAGGAGGCAGGGGT...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCAACTCAAACTAACATCTaGCATCCATCTGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TVTQPPRRSLVSWQGILATQTNI*HPSEAR Trigger: CCTGGCCTCAGATGGATGCCAGATGTTAGTTTGAGT...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CAA 90 bp | CTTTCATTTCCCTGGAATTCCAATCAAATACAGTCCCGTCTTGTTTaGTGTTTTTGCGAGGCCTGGCCCAGAGCCCAAGGAGAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: LSFPWNSNQIQSRLV*CFCEAWPRAQGEAT Trigger: AGTGGCCTCTCCTTGGGCTCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGAATTCCAGGGAAATGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CAA 90 bp | ACCCACTTTCATTTCCCTGGAATTCCAATCAAATACAGTCCCGTCTaGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAGCCCAAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: THFHFPGIPIKYSPV*FCVFARPGPEPKER Trigger: CCTCTCCTTGGGCTCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGAATTCCAGGGAAATGAAAGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAGTGAGGAGCCAGAGGTaGAAGAAGGAGGAGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRVRSQR*KKEELK Trigger: TTTGAGCTCCTCCTTCTTCCACCTCTGGCTCCTCAC...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CAA 90 bp | GTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTaGGCAGTGCTCTATTCAGGTTTAAAACATAGTAACAAGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: VTQPPRRSLVSWQGI*AVLYSGLKHSNKEQ Trigger: TTGTTCCTTGTTACTATGTTTTAAACCTGAATAGAGCACTGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR GCA 72 bp | GGAGGTGGGGGTTCCGGGACAAACACTGGTGGTGGCTaGCCCGCCACAGTCCAACCTGGGCAGGGTCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: GGGGSGTNTGGG*PATVQPGQGLY Trigger: GTACAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCACCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CCA 72 bp | GGCATCCATCTGAGGCCAGGCTGGGAGCAAAGGGCCTaGAAGAGAATGGCTTCCCGCTGGGGCTCGGATCCG | + |
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Preference number: 3 (lower is better) Translates to: GIHLRPGWEQRA*KRMASRWGSDP Trigger: CGGATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGGCCTCAGATGGATGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| 3UTR CCA 72 bp | TGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTaGGGCTCGGATCCGTCCCAGGCTGGTGTGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: WEQRAWKRMASR*GSDPSQAGVVR Trigger: CCTTACCACACCAGCCTGGGACGGATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR GCA 72 bp | CCCACTGGCTGTGCTAGACCAGGGAGCAGGTCAGCCTaGTCCCAGCACAGGAAAGTAATGAGCTACCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PTGCARPGSRSA*SQHRKVMSYHP Trigger: GGGGTGGTAGCTCATTACTTTCCTGTGCTGGGAGCAGGCTGACCTGCTCCCTGGTCTAGCACAGCCAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCATCCTGGCAGGGGATTTaGGCAGTGCTCTATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AGQRHSSVAQSLPTCVGASWQGI*AVLYSG Trigger: ACCTGAATAGAGCACTGCCAAAATCCCCTGCCAGGA...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR TCA 72 bp | GGAGCCAGAGGTGGAAGAAGGAGGAGCTCAAACACGTaGGCACCCCTGCCTCCTGCTGCATATATCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GARGGRRRSSNT*APLPPAAYISW Trigger: CCAGGAGATATATGCAGCAGGAGGCAGGGGTGCTCACGTGTTTGAGCTCCTCCTTCTTCCACCTCTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR GCA 72 bp | CAAGAAGCTAGAAGCAGGGGGTGTTCGTTCCTTCTGTaGCCCATCCTGTCCTGGGATGCAGCCTCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QEARSRGCSFLL*PILSWDAASGT Trigger: TGTCCCAGAGGCTGCATCCCAGGACAGGATGGGGCACAGAAGGAACGAACACCCCCTGCTTCTAGCTTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCACCTGTTCCTAGTGTCTaGAGAGCCCAAGAAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: AGQRHSSVAQSLPTCVGAPVPSV*RAQEAR Trigger: TCTAGCTTCTTGGGCTCTCAAGACACTAGGAACAGG...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGTCCTGGCAGGGGATTTaGGCAGTGCTCTATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VGAPVRGPVSTSGSESRRSWQGI*AVLYSG Trigger: ACCTGAATAGAGCACTGCCAAAATCCCCTGCCAGGA...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCTCTTGTTTTGTGTTTTaGCGAGGCCTGGCCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSTSGSESRRVASGSTAASCFVF*RGLAQS Trigger: GCTCTGGGCCAGGCCTCGCAAAAACACAAAACAAGA...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR GCA 72 bp | GAGGAGCTCAAACACGTGAGCACCCCTGCCTCCTGCTaGATATATCTCCTGGGTAGGCTCCAGACACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EELKHVSTPASC*IYLLGRLQTQG Trigger: ACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGAGGCAGGGGTGCTCACGTGTTTGAGCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CCA 72 bp | TTCCCTGCCATTGCGGCAGCAACTCAAACTAACATCTaGCATCCATCTGAGGCCAGGCTGGGAGCAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPAIAAATQTNI*HPSEARLGAKG Trigger: GCCCTTTGCTCCCAGCCTGGCCTCAGATGGATGCCAGATGTTAGTTTGAGTTGCTGCCGCAATGGCAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR GCA 72 bp | GCCACCATCTGGCCAGACTCTGCTTGTAATCTAGCTTaGTCTCTCCCCAGATTCCCACTGGCTGTGCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ATIWPDSACNLA*SLPRFPLAVLD Trigger: GTCTAGCACAGCCAGTGGGAATCTGGGGAGAGAGCAAGCTAGATTACAAGCAGAGTCTGGCCAGATGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CCA 72 bp | CCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTaGAAGAAGGAGGAGCTCAAACACGTGAGCACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKEYQASVRSQR*KKEELKHVSTP Trigger: AGGGGTGCTCACGTGTTTGAGCTCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR TCA 72 bp | GTCCAACCTGGGCAGGGTCTGTACACCAGATTCAGGTaGGATAACAGTCACTCAGCCACCAAGACGGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: VQPGQGLYTRFR*DNSHSATKTVT Trigger: AGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGGTGTACAGACCCTGCCCAGGTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR GCA 72 bp | CAGCTTTCAGAAGAACAAAACAGCCAGGAGCAGTGGTaGACACTTGCAACCGAAGCTCCTAGGGTAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLSEEQNSQEQW*TLATEAPRVRE Trigger: CTCCCTTACCCTAGGAGCTTCGGTTGCAAGTGTGCACCACTGCTCCTGGCTGTTTTGTTCTTCTGAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCCCTGTTCCTAGTGTCTaGAGAGCCCAAGAAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PDSGEITVTQPPRRSLVSPVPSV*RAQEAR Trigger: TCTAGCTTCTTGGGCTCTCAAGACACTAGGAACAGG...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CCA 72 bp | CAGGCTGCATTTAGTGTAATAGTTGAGGCCGTCCCCTaGCTTCAGCTGAACCCCAAAGAATACCAGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QAAFSVIVEAVP*LQLNPKEYQAS Trigger: TGAAGCCTGGTATTCTTTGGGGTTCAGCTGAAGCCAGGGGACGGCCTCAACTATTACACTAAATGCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CCA 72 bp | AAACAGCTTTCAGAAGAACAAAACAGCCAGGAGCAGTaGTGCACACTTGCAACCGAAGCTCCTAGGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KQLSEEQNSQEQ*CTLATEAPRVR Trigger: CCTTACCCTAGGAGCTTCGGTTGCAAGTGTGCACCACTGCTCCTGGCTGTTTTGTTCTTCTGAAAGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTGGGGCTCGGATGCCCACACTGCGTGCTaGGCTGGGGCTGGGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGWEQRAWKRMASRWGSDAHTAC*AGAGGY Trigger: GTAGCCCCCAGCCCCAGCTCAGCACGCAGTGTGGGC...ATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGGTGCTGAGCTGGGGCTaGGGGCTACCACCGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLVLSWG*GLPPPI Trigger: GATGGGCGGTGGTAGCCCCCAGCCCCAGCTCAGCAC...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGCCCAGCATGTCTCTCTaGTCCCGGTCCCCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLPSMSL*SRSPLV Trigger: GACCAGAGGGGACCGGGAGCAGAGAGACATGCTGGG...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGCCCACATGCATGGTGTaGCGGAAGTCACCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLPTCMV*RKSPSG Trigger: CCCGCTGGGTGACTTCCGCCACACCATGCATGTGGG...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGCTGGGGCTCGGATCCGTCCCAGGCTGGTGTGGTAAGGAAGGTTAGGTCACACTGCGTGCTGAGCTaGGGCTGGGGGCTACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SRWGSDPSQAGVVRKVRSHCVLS*GWGLPP Trigger: CGGTGGTAGCCCCCAGCCCCAGCTCAGCACGCAGTG...TGACCTAACCTTCCTTACCACACCAGCCTGGGACGGATCCGAGCCCCAGCGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGCGCCTGAGGTGTAGCTaGACAGGGAGCTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLRLRCS*TGSCCP Trigger: GGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCG...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGAGCCGCCACCCTGTCTaGGCCTCTGAAAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLSRHPV*ASESWA Trigger: AGCCCAGCTTTCAGAGGCCCAGACAGGGTGGCGGCT...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGTTCCTCCTCCTCCTCTaGGCCCCACTGGTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLFLLLL*APLVLV Trigger: GACAAGGACCAGTGGGGCTCAGAGGAGGAGGAGGAA...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGGTTCCGGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGGCAGCATAGAGGCCTaGTCCCAGCTGGCCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGFRDKHWWWLPRHSPTWGSIEA*SQLALL Trigger: AAGCAAGGCCAGCTGGGACCAGGCCTCTATGCTGCC...CCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGGTTCCGGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGCGGCTTCCTTCTCATTaGGCTGAGGCAGGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: WGFRDKHWWWLPRHSPTWRLPSH*AEAGTW Trigger: CCATGTCCCTGCCTCAGCTCAATGAGAAGGAAGCCG...CCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGGTTCCGGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGAGGTCCCCAAAGGCCTaGTCGTCAAGGAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WGFRDKHWWWLPRHSPTWRSPKA*SSRSGS Trigger: TGACCCACTCCTTGACGAGCAGGCCTTTGGGGACCT...CCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTGGGGCTCGGATAATTCCTTGTCTGGCTaGCTTGGGGGAGCAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGWEQRAWKRMASRWGSDNSLSG*LGGAAA Trigger: GGCGGCTGCTCCCCCAAGGCAGCCAGACAAGGAATT...ATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGGCAGGGTCTGCCTTCTTCACAGGGCTaGACGACAGGCTCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTNTGGGCPATVQPGQGLPSSQG*TTGSWA Trigger: TGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGG...CAGACCCTGCCCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCAAGTGGGTCAGGTGAGTaGGGGCCTGTGGCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQRHSSVAQSLPTCVGASGSGE*GPVAPF Trigger: GAACGGGGCCACAGGCCCCCACTCACCTGACCCACT...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTCAGCCTGCTCCCAGCACAGGAAAGTAATGAGCTACCACCCCCAGGGAGTGGGTCAGGTGAGTaGGGGCCTGTGGCCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQVSLLPAQESNELPPPGSGSGE*GPVAPF Trigger: GAACGGGGCCACAGGCCCCCACTCACCTGACCCACT...CCCTGGGGGTGGTAGCTCATTACTTTCCTGTGCTGGGAGCAGGCTGACCTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGTCAGCCTGCTCCCAGCACAGGAAAGTAATGAGCTACCACCCCCAGGGGGCTCTTGGGCAGCTTaGTCGAGTCCTTCTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EQVSLLPAQESNELPPPGGSWAA*SSPSPR Trigger: CCGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCC...CCCTGGGGGTGGTAGCTCATTACTTTCCTGTGCTGGGAGCAGGCTGACCTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCATCTGGTCACGGACTGTaGACGCTTGCTGCCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRHSSVAQSLPTCVGASGHGL*TLAAPE Trigger: TTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGA...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GAACCCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTGGAAGAAGGAGGAGCCCACACTGCGTGCTaGGCTGGGGCTGGGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EPQRIPGFSEEPEVEEGGAHTAC*AGAGGY Trigger: GTAGCCCCCAGCCCCAGCTCAGCACGCAGTGTGGGC...TCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGGAGCAAAGGGCCTGGAAGAGAATGGCTTCCCGCTGGGGCTCGGATACTGTGAACGCTTGCTaGCCCGGAACTTCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGWEQRAWKRMASRWGSDTVNAC*PGTSWT Trigger: TGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGT...ATCCGAGCCCCAGCGGGAAGCCATTCTCTTCCAGGCCCTTTGCTCCCAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGCCCACATGCATGGTGTaGCGGAAGTCACCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHSPPSATNSYGGGGSGPTCMV*RKSPSG Trigger: CCCGCTGGGTGACTTCCGCCACACCATGCATGTGGG...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGCTGGGGCTCGGATCCGTCCCAGGCTGGTGTGGTAAGGAAGGTTAGGTCATGGACGACAGGCTCTTaGGCAGCTTGCTCGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRWGSDPSQAGVVRKVRSWTTGS*AACSSP Trigger: AGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCA...TGACCTAACCTTCCTTACCACACCAGCCTGGGACGGATCCGAGCCCCAGCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCAAGGCCTGGTCCCAGCTaGCCTTGCTTTCCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQRHSSVAQSLPTCVGARPGPS*PCFPVS Trigger: GGAGACAGGAAAGCAAGGCCAGCTGGGACCAGGCCT...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGCTGTCCCGAGTGGTGTaGCTGCCCACACTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHSPPSATNSYGGGGSGLSRVV*LPTLRA Trigger: AGCACGCAGTGTGGGCAGCCACACCACTCGGGACAG...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCAGCTGCTGTCCCGAGTaGTGTGGCTGCCCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSGSESRRVASGSTAASCCPE*CGCPHC Trigger: GCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCT...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGCCCAGAGCCCAAGGAGAGGCCACTAACTAGCCAAAGCGTAGCTCACTGGGCCTCTGAAAGCTaGGCTGCGCTCCTCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGPEPKERPLTSQSVAHWASES*AALLKD Trigger: GTCCTTGAGGAGCGCAGCCCAGCTTTCAGAGGCCCA...GTGAGCTACGCTTTGGCTAGTTAGTGGCCTCTCCTTGGGCTCTGGGCCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGACTTGACAAACAGTGCTaGGTCCCGCAGGGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGLDKQC*VPQGAQ Trigger: CTGGGCTCCCTGCGGGACTCAGCACTGTTTGTCAAG...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCACGGCTTCCTTCTCATTaGGCTGAGGCAGGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGQRHSSVAQSLPTCVGARLPSH*AEAGTW Trigger: CCATGTCCCTGCCTCAGCTCAATGAGAAGGAAGCCG...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGTTCCTCCTCCTCCTCTaGGCCCCACTGGTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLHSPPSATNSYGGGGSGFLLLL*APLVLV Trigger: GACAAGGACCAGTGGGGCTCAGAGGAGGAGGAGGAA...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGGCGCCTGGACAATGCTaGTGGGGCCTTCCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGAPVRGPVSTSGSESRRAPGQC*WGLPCH Trigger: GTGACAAGGAAGGCCCCAGCAGCATTGTCCAGGCGC...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGAATTCCTTGTCTGGCTaGCTTGGGGGAGCAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGAPVRGPVSTSGSESRRNSLSG*LGGAAA Trigger: GGCGGCTGCTCCCCCAAGGCAGCCAGACAAGGAATT...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTGGAAGAAGGAGGAGTGCTGAGCTGGGGCTaGGGGCTACCACCGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EPQRIPGFSEEPEVEEGGVLSWG*GLPPPI Trigger: GATGGGCGGTGGTAGCCCCCAGCCCCAGCTCAGCAC...TCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | TCCCGCTGGGGCTCGGATCCGTCCCAGGCTGGTGTGGTAAGGAAGGTTAGGTCATCCTTCTCATTGAGCTaGGGCAGGGACATGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SRWGSDPSQAGVVRKVRSSFSLS*GRDMAF Trigger: GAATGCCATGTCCCTGCCTCAGCTCAATGAGAAGGA...TGACCTAACCTTCCTTACCACACCAGCCTGGGACGGATCCGAGCCCCAGCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGGTCCCAGCTGGCCTTaGTTTCCTGTCTCCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGGPSWP*FPVSLE Trigger: CTCTAGGGAGACAGGAAAGCAAGGCCAGCTGGGACC...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCGGCCCCAGGTCGATGTaGAAGGACAGGATCGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSGSESRRVASGSTAAGPRSM*KDRIDS Trigger: AGAGTCGATCCTGTCCTTCCACATCGACCTGGGGCC...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGCATATATCTCCTGGGTAGGCTCCAGACACAAGGTGAACAGAAGGGACACTGCGTGCTGAGCTaGGGCTGGGGGCTACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SCCIYLLGRLQTQGEQKGHCVLS*GWGLPP Trigger: CGGTGGTAGCCCCCAGCCCCAGCTCAGCACGCAGTG...TCCCTTCTGTTCACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCACGCCTGAGGTGTAGCTaGACAGGGAGCTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVTQPPRRSLVSWQGILARLRCS*TGSCCP Trigger: GGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCG...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGGCAGAATTCCTTGTCTaGCTGCCTTGGGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGAPVRGPVSTSGSESRRAEFLV*LPWGSS Trigger: GCTGCTCCCCCAAGGCAGCCAGACAAGGAATTCTGC...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGAACAAACACACCCATGGGCAGAGCTGGCCCCTTTCCTGTTCCTAGTGTCCTTGACAAACAGTGCTaGGTCCCGCAGGGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGTNTPMGRAGPFPVPSVLDKQC*VPQGAQ Trigger: CTGGGCTCCCTGCGGGACTCAGCACTGTTTGTCAAG...GACACTAGGAACAGGAAAGGGGCCAGCTCTGCCCATGGGTGTGTTTGTTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTGGAAGAAGGAGGACCCAGCATGTCTCTCTaGTCCCGGTCCCCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPQRIPGFSEEPEVEEGGPSMSL*SRSPLV Trigger: GACCAGAGGGGACCGGGAGCAGAGAGACATGCTGGG...TCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAACAAACACACCCATGGGCAGAGCTGGCCCCTTTCCTGTTCCTAGTGTCGCGCCTGGACAATGCTaGTGGGGCCTTCCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGTNTPMGRAGPFPVPSVAPGQC*WGLPCH Trigger: GTGACAAGGAAGGCCCCAGCAGCATTGTCCAGGCGC...GACACTAGGAACAGGAAAGGGGCCAGCTCTGCCCATGGGTGTGTTTGTTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGCAGCAGGGAAAAGATGCAGCCCAGAGATGTGGAGGCGACTTTCAACTGGACGACAGGCTCTTaGGCAGCTTGCTCGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSREKMQPRDVEATFNWTTGS*AACSSP Trigger: AGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCA...GTTGAAAGTCGCCTCCACATCTCTGGGCTGCATCTTTTCCCTGCTGCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGATCCTCTGAGCCCCACTaGTCCTTGTCCATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQRHSSVAQSLPTCVGSSEPH*SLSMML Trigger: CAGCATCATGGACAAGGACCAGTGGGGCTCAGAGGA...TCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTTGTGTGTGTACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGGGCAGCATAGAGGCCTaGTCCCAGCTGGCCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCCVCTAGQRHSSVAQSLGSIEA*SQLALL Trigger: AAGCAAGGCCAGCTGGGACCAGGCCTCTATGCTGCC...CAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGTACACACACAACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTGGAAGAAGGAGGACTGTCCCGAGTGGTGTaGCTGCCCACACTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQRIPGFSEEPEVEEGGLSRVV*LPTLRA Trigger: AGCACGCAGTGTGGGCAGCCACACCACTCGGGACAG...TCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTTGTGTGTGTACTGCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGTGGGCCTCTGAAAGCTaGGCTGCGCTCCTCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCCVCTAGQRHSSVAQSLWASES*AALLKD Trigger: GTCCTTGAGGAGCGCAGCCCAGCTTTCAGAGGCCCA...CAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGCAGTACACACACAACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCCTTGTCTGGCTGCCTTaGGGGAGCAGCCGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSGEITVTQPPRRSLVSLVWLP*GSSRHP Trigger: AGGGTGGCGGCTGCTCCCCCAAGGCAGCCAGACAAG...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGCATATATCTCCTGGGTAGGCTCCAGACACAAGGTGAACAGAAGGGACTTGTCTGGCTGCCTTaGGGGAGCAGCCGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCCIYLLGRLQTQGEQKGLVWLP*GSSRHP Trigger: AGGGTGGCGGCTGCTCCCCCAAGGCAGCCAGACAAG...TCCCTTCTGTTCACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGGAGCCAAGTGTCCATGACCTTGGAGAGAAGCCCACACCTGGCTTCCGCAGAATTCCTTGTCTaGCTGCCTTGGGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGSQVSMTLERSPHLASAEFLV*LPWGSS Trigger: GCTGCTCCCCCAAGGCAGCCAGACAAGGAATTCTGC...GGAAGCCAGGTGTGGGCTTCTCTCCAAGGTCATGGACACTTGGCTCCCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCGGGACATGGCATTCTTaGCAAACAGTGCTGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSGSESRRVASGSTAAGTWHS*QTVLSP Trigger: GGGACTCAGCACTGTTTGTCAAGAATGCCATGTCCC...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGAGCACCTGTCAGGGGCCCAGTGAGCACTTCAGGGTCTGAATCTAGGAGGTCCTTCTCATTGAGCTaGGGCAGGGACATGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VGAPVRGPVSTSGSESRRSFSLS*GRDMAF Trigger: GAATGCCATGTCCCTGCCTCAGCTCAATGAGAAGGA...CCTCCTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCACCTCCTCCTCATCCATaGAGCAGAATTCCTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGQRHSSVAQSLPTCVGAPPPHP*SRIPCL Trigger: CAGACAAGGAATTCTGCTTCATGGATGAGGAGGAGG...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCAGCCGCCACCCTGTCTaGGCCTCTGAAAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSGEITVTQPPRRSLVSSRHPV*ASESWA Trigger: AGCCCAGCTTTCAGAGGCCCAGACAGGGTGGCGGCT...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CAA 72 bp | ATGGGCAGAGCTGGCCCCTTTCCTGTTCCTAGTGTCTaGAGAGCCCAAGAAGCTAGAAGCAGGGGGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: MGRAGPFPVPSV*RAQEARSRGCS Trigger: CGAACACCCCCTGCTTCTAGCTTCTTGGGCTCTCAAGACACTAGGAACAGGAAAGGGGCCAGCTCTGCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTCTGGTCACGGACTGTaGACGCTTGCTGCCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGEITVTQPPRRSLVSSGHGL*TLAAPE Trigger: TTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGA...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCAGGACAGGATCGACTCTaGATGCTTCAGCCCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTQPPRRSLVSWQGILAGQDRL*MLQPVA Trigger: AGCTACGGGCTGAAGCATGCAGAGTCGATCCTGTCC...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTTGGCATCCTCTGAGCCCCACTaGTCCTTGTCCATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTQPPRRSLVSWQGILASSEPH*SLSMML Trigger: CAGCATCATGGACAAGGACCAGTGGGGCTCAGAGGA...TGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCATATATCTCCTGGGTAGGCTCCAGACACAAGGTGAACAGAAGGGAAGGTCCCCAAAGGCCTaGTCGTCAAGGAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCCIYLLGRLQTQGEQKGRSPKA*SSRSGS Trigger: TGACCCACTCCTTGACGAGCAGGCCTTTGGGGACCT...TCCCTTCTGTTCACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAAGCTGCTGTCCCGAGTaGTGTGGCTGCCCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRSCCPE*CGCPHC Trigger: GCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCT...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CAA 72 bp | ACCTTGGAGAGAAGCCCACACCTGGCTTCCCTGCCATaGCGGCAGCAACTCAAACTAACATCTGGCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLERSPHLASLP*RQQLKLTSGIH Trigger: ATGGATGCCAGATGTTAGTTTGAGTTGCTGCCGCAATGGCAGGGAAGCCAGGTGTGGGCTTCTCTCCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCACTGTGAACGCTTGCTaGCCCGGAACTTCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGEITVTQPPRRSLVSTVNAC*PGTSWT Trigger: TGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGT...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCATATATCTCCTGGGTAGGCTCCAGACACAAGGTGAACAGAAGGGAGGACAGGATCGACTCTaGATGCTTCAGCCCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCCIYLLGRLQTQGEQKGGQDRL*MLQPVA Trigger: AGCTACGGGCTGAAGCATGCAGAGTCGATCCTGTCC...TCCCTTCTGTTCACCTTGTGTCTGGAGCCTACCCAGGAGATATATGCAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CAA 72 bp | TTCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTaGCGAGGCCTGGCCCAGAGCCCAAGGAGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQSNTVPSCFVF*RGLAQSPRRGH Trigger: GTGGCCTCTCCTTGGGCTCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAGGTCCCAGCTGGCCTTaGTTTCCTGTCTCCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRGPSWP*FPVSLE Trigger: CTCTAGGGAGACAGGAAAGCAAGGCCAGCTGGGACC...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CCA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAGGCCCCAGGTCGATGTaGAAGGACAGGATCGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRGPRSM*KDRIDS Trigger: AGAGTCGATCCTGTCCTTCCACATCGACCTGGGGCC...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATTCAGGTGAGATAACAGTCACTCAGCCACCAAGACGGTCACTAGTCTCCCCTCCTCCTCATCCATaGAGCAGAATTCCTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDSGEITVTQPPRRSLVSPPPHP*SRIPCL Trigger: CAGACAAGGAATTCTGCTTCATGGATGAGGAGGAGG...GGAGACTAGTGACCGTCTTGGTGGCTGAGTGACTGTTATCTCACCTGAATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| 3UTR CAA 72 bp | CCACCAAGACGGTCACTAGTCTCCTGGCAGGGGATTTaGGCAGTGCTCTATTCAGGTTTAAAACATAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRRSLVSWQGI*AVLYSGLKHSN Trigger: GTTACTATGTTTTAAACCTGAATAGAGCACTGCCAAAATCCCCTGCCAGGAGACTAGTGACCGTCTTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS CCA 90 bp | AGCTGCTGTCCCGAGTGGTGTGGCTGCCCACACTGCGTGCTGAGCTaGGGCTGGGGGCTACCACCGCCCATCCGTCATCCTCCACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SCCPEWCGCPHCVLS*GWGLPPPIRHPPQR Trigger: ACGCTGTGGAGGATGACGGATGGGCGGTGGTAGCCCCCAGCCCCAGCTCAGCACGCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS GCA 90 bp | GGCTGCGCTCCTCAAGGACGCCTGAGGTGTAGCTGGACAGGGAGCTaGTGTCCCGAGTGGTGTGGCTGCCCACACTGCGTGCTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCAPQGRLRCSWTGS*CPEWCGCPHCVLSW Trigger: CCAGCTCAGCACGCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTGAGGAGCGCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS CCA 90 bp | CAAGGACGCCTGAGGTGTAGCTGGACAGGGAGCTGCTGTCCCGAGTaGTGTGGCTGCCCACACTGCGTGCTGAGCTGGGGCTGGGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QGRLRCSWTGSCCPE*CGCPHCVLSWGWGL Trigger: TAGCCCCCAGCCCCAGCTCAGCACGCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS TCA 90 bp | CCTGTCTGGGCCTCTGAAAGCTGGGCTGCGCTCCTCAAGGACGCCTaGGGTGTAGCTGGACAGGGAGCTGCTGTCCCGAGTGGTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVWASESWAALLKDA*GVAGQGAAVPSGVA Trigger: AGCCACACCACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTGAGGAGCGCAGCCCAGCTTTCAGAGGCCCAGACAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCCCTTGTCTGGCTGCCTaGGGGGAGCAGCCGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSGSESRRVASGSTAAPCLAA*GEQPPP Trigger: GGGTGGCGGCTGCTCCCCCAAGGCAGCCAGACAAGG...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTACACAGCCCTCCTTCAGCCACTAACAGCTATGGAGGTGGGGGTTCCGGGCCTTGTCTGGCTGCCTaGGGGGAGCAGCCGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: FLHSPPSATNSYGGGGSGPCLAA*GEQPPP Trigger: GGGTGGCGGCTGCTCCCCCAAGGCAGCCAGACAAGG...CCCGGAACCCCCACCTCCATAGCTGTTAGTGGCTGAAGGAGGGCTGTGTAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
||
| CDS TCA 90 bp | GCCCAGCATGTCTCTCTGCTCCCGGTCCCCTCTGGTCACGGACTGTaGACGCTTGCTGCCCCGGAACTTCCTGGACAGGAGGCTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQHVSLLPVPSGHGL*TLAAPELPGQEAEL Trigger: AAGCTCAGCCTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGAGGGGACCGGGAGCAGAGAGACATGCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS GCA 90 bp | GGCCCCGTTCCGATGGGGACTCTTCGGGCCACCATCTCTAGCGTCTaGCTTCTTCACAGGGCTGGACGACAGGCTCTTGGGCAGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GPVPMGTLRATISSV*LLHRAGRQALGQLA Trigger: AGCAAGCTGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGGCAGACGCTAGAGATGGTGGCCCGAAGAGTCCCCATCGGAACGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS TCA 90 bp | GTCACCCAGCGGGGCACTGATCATCTCGGCTGTGAGGTCCGCACGTaGGCGGCGCTTCGAGTTCACAGAGCTGGACACCAGCTGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VTQRGTDHLGCEVRT*AALRVHRAGHQLFE Trigger: CTCAAACAGCTGGTGTCCAGCTCTGTGAACTCGAAGCGCCGCTCACGTGCGGACCTCACAGCCGAGATGATCAGTGCCCCGCTGGGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 ENSMUST00000153453.2 |
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| CDS TCA 90 bp | CGGACTGTGAACGCTTGCTGCCCCGGAACTTCCTGGACAGGAGGCTaGGCTTGGAAGCCGAGGCCTGTTCATCCAGGGACTCGTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RTVNACCPGTSWTGG*AWKPRPVHPGTRRL Trigger: CAGACGACGAGTCCCTGGATGAACAGGCCTCGGCTTCCAAGCTCAGCCTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CCA 90 bp | TCAAGGAGTGGGTCAGGTGAGTGGGGGCCTGTGGCCCCGTTCCGATaGGGACTCTTCGGGCCACCATCTCTAGCGTCTGCCTTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: SRSGSGEWGPVAPFR*GLFGPPSLASAFFT Trigger: TGTGAAGAAGGCAGACGCTAGAGATGGTGGCCCGAAGAGTCCCCATCGGAACGGGGCCACAGGCCCCCACTCACCTGACCCACTCCTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS GCA 90 bp | GCTGAGCTTGGAAGCCGAGGCCTGTTCATCCAGGGACTCGTCGTCTaGCTCCCTGGCCTTGCTAGTGAGGAAAGACGTGTCCCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: AELGSRGLFIQGLVV*LPGLASEERRVPKG Trigger: GCCTTTGGGGACACGTCTTTCCTCACTAGCAAGGCCAGGGAGGCAGACGACGAGTCCCTGGATGAACAGGCCTCGGCTTCCAAGCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 ENSMUST00000153453.2 |
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| CDS-3UTR CAA 90 bp | GTGAGCACTTCAGGGTCTGAATCTAGGAGGGTGGCCTCTGGAAGCACAGCAGCCAGGCTCTTGGGCAGCTaGCTCGAGTCCTTCTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: VSTSGSESRRVASGSTAARLLGS*LESFSA Trigger: CGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCCT...GGCTGCTGTGCTTCCAGAGGCCACCCTCCTAGATTCAGACCCTGAAGTGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGTTCCGGGACAAACACTGGTGGTGGCTGCCCCGCCACAGTCCAACCTGGATGAAGCAGAATTCCTaGTCTGGCTGCCTTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: WGFRDKHWWWLPRHSPTWMKQNS*SGCLGG Trigger: TCCCCCAAGGCAGCCAGACAAGGAATTCTGCTTCAT...CCAGGTTGGACTGTGGCGGGGCAGCCACCACCAGTGTTTGTCCCGGAACCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGGAGCCAAGTGTCCATGACCTTGGAGAGAAGCCCACACCTGGCTTCCACGGACTGTGAACGCTaGCTGCCCCGGAACTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TEGSQVSMTLERSPHLASTDCER*LPRNFL Trigger: CAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGT...GGAAGCCAGGTGTGGGCTTCTCTCCAAGGTCATGGACACTTGGCTCCCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTCAGCCTGCTCCCAGCACAGGAAAGTAATGAGCTACCACCCCCAGGGGAGCCCCACTGGTCCTaGTCCATGATGCTGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: EQVSLLPAQESNELPPPGEPHWS*SMMLRT Trigger: TGTTCTCAGCATCATGGACAAGGACCAGTGGGGCTC...CCCTGGGGGTGGTAGCTCATTACTTTCCTGTGCTGGGAGCAGGCTGACCTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS TCA 90 bp | GGCAGCTTGCTCGAGTCCTTCTCCGCGGCTTCCTTCTCATTGAGCTaGGGCAGGGACATGGCATTCTTGACAAACAGTGCTGAGTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GSLLESFSAASFSLS*GRDMAFLTNSAESR Trigger: GCGGGACTCAGCACTGTTTGTCAAGAATGCCATGTCCCTGCCTCAGCTCAATGAGAAGGAAGCCGCGGAGAAGGACTCGAGCAAGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGAGGCACAGCTCTGTAGCTCAGTCACTGCCTACCTGCGTAGGAGCAAGGGACATGGCATTCTaGACAAACAGTGCTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: AGQRHSSVAQSLPTCVGARDMAF*TNSAES Trigger: GGACTCAGCACTGTTTGTCAAGAATGCCATGTCCCT...TGCTCCTACGCAGGTAGGCAGTGACTGAGCTACAGAGCTGTGCCTCTGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCAGCAGCAGGGAAAAGATGCAGCCCAGAGATGTGGAGGCGACTTTCAACATGAAGCAGAATTCCTaGTCTGGCTGCCTTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GSSSREKMQPRDVEATFNMKQNS*SGCLGG Trigger: TCCCCCAAGGCAGCCAGACAAGGAATTCTGCTTCAT...GTTGAAAGTCGCCTCCACATCTCTGGGCTGCATCTTTTCCCTGCTGCTGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | GAACCCCAAAGAATACCAGGCTTCAGTGAGGAGCCAGAGGTGGAAGAAGGAGGAGAGCCCCACTGGTCCTaGTCCATGATGCTGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: EPQRIPGFSEEPEVEEGGEPHWS*SMMLRT Trigger: TGTTCTCAGCATCATGGACAAGGACCAGTGGGGCTC...TCCTCCTTCTTCCACCTCTGGCTCCTCACTGAAGCCTGGTATTCTTTGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAACGGACTGTGAACGCTaGCTGCCCCGGAACTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRTDCER*LPRNFL Trigger: CAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGT...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS-3UTR CAA 90 bp | TCCAATCAAATACAGTCCCGTCTTGTTTTGTGTTTTTGCGAGGCCTGGCCCAGAAGGGACATGGCATTCTaGACAAACAGTGCTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SNQIQSRLVLCFCEAWPRRDMAF*TNSAES Trigger: GGACTCAGCACTGTTTGTCAAGAATGCCATGTCCCT...TCTGGGCCAGGCCTCGCAAAAACACAAAACAAGACGGGACTGTATTTGATTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS TCA 72 bp | GCCTTGGGGGAGCAGCCGCCACCCTGTCTGGGCCTCTaGAAGCTGGGCTGCGCTCCTCAAGGACGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALGEQPPPCLGL*KLGCAPQGRLR Trigger: CCTCAGGCGTCCTTGAGGAGCGCAGCCCAGCTTTCAGAGGCCCAGACAGGGTGGCGGCTGCTCCCCCAAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CCA 72 bp | CCCGAGTGGTGTGGCTGCCCACACTGCGTGCTGAGCTaGGGCTGGGGGCTACCACCGCCCATCCGTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: PEWCGCPHCVLS*GWGLPPPIRHP Trigger: AGGATGACGGATGGGCGGTGGTAGCCCCCAGCCCCAGCTCAGCACGCAGTGTGGGCAGCCACACCACTCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CCA 72 bp | GGGTCAGGTGAGTGGGGGCCTGTGGCCCCGTTCCGATaGGGACTCTTCGGGCCACCATCTCTAGCGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGEWGPVAPFR*GLFGPPSLASA Trigger: GGCAGACGCTAGAGATGGTGGCCCGAAGAGTCCCCATCGGAACGGGGCCACAGGCCCCCACTCACCTGACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CCA 72 bp | CCACCTCCAGCACAGGGGGCGCCTGGACAATGCTGCTaGGGCCTTCCTTGTCACGGTACCCGCCAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPPAQGAPGQCC*GLPCHGTRQLP Trigger: AGGAAGCTGGCGGGTACCGTGACAAGGAAGGCCCCAGCAGCATTGTCCAGGCGCCCCCTGTGCTGGAGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CCA 72 bp | CTGGGCTGCGCTCCTCAAGGACGCCTGAGGTGTAGCTaGACAGGGAGCTGCTGTCCCGAGTGGTGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LGCAPQGRLRCS*TGSCCPEWCGC Trigger: GCAGCCACACCACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTGAGGAGCGCAGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS GCA 72 bp | CCTCAAGGACGCCTGAGGTGTAGCTGGACAGGGAGCTaGTGTCCCGAGTGGTGTGGCTGCCCACACTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: PQGRLRCSWTGS*CPEWCGCPHCV Trigger: CACGCAGTGTGGGCAGCCACACCACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CCA 72 bp | GGGAGCCCAGCATGTCTCTCTGCTCCCGGTCCCCTCTaGTCACGGACTGTGAACGCTTGCTGCCCCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: GSPACLSAPGPL*SRTVNACCPGT Trigger: AGTTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGAGGGGACCGGGAGCAGAGAGACATGCTGGGCTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CAA 72 bp | TGCTCCCGGTCCCCTCTGGTCACGGACTGTGAACGCTaGCTGCCCCGGAACTTCCTGGACAGGAGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSRSPLVTDCER*LPRNFLDRRLS Trigger: GCTCAGCCTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGAGGGGACCGGGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CAA 72 bp | ACAGGGGGCGCCTGGACAATGCTGCTGGGGCCTTCCTaGTCACGGTACCCGCCAGCTTCCTCCTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TGGAWTMLLGPS*SRYPPASSSSS Trigger: AGAGGAGGAGGAGGAAGCTGGCGGGTACCGTGACAAGGAAGGCCCCAGCAGCATTGTCCAGGCGCCCCCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS TCA 72 bp | GTCTCTCTGCTCCCGGTCCCCTCTGGTCACGGACTGTaGACGCTTGCTGCCCCGGAACTTCCTGGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VSLLPVPSGHGL*TLAAPELPGQE Trigger: CTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGAGGGGACCGGGAGCAGAGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS TCA 72 bp | GCCTCTGAAAGCTGGGCTGCGCTCCTCAAGGACGCCTaGGGTGTAGCTGGACAGGGAGCTGCTGTCCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: ASESWAALLKDA*GVAGQGAAVPS Trigger: ACTCGGGACAGCAGCTCCCTGTCCAGCTACACCTCAGGCGTCCTTGAGGAGCGCAGCCCAGCTTTCAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CCA 72 bp | CCTAGAGGAGGAACCACCTCCAGCACAGGGGGCGCCTaGACAATGCTGCTGGGGCCTTCCTTGTCACGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PRGGTTSSTGGA*TMLLGPSLSRY Trigger: GTACCGTGACAAGGAAGGCCCCAGCAGCATTGTCCAGGCGCCCCCTGTGCTGGAGGTGGTTCCTCCTCTAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS CAA 72 bp | GCGTCTGCCTTCTTCACAGGGCTGGACGACAGGCTCTaGGGCAGCTTGCTCGAGTCCTTCTCCGCGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASAFFTGLDDRL*GSLLESFSAAS Trigger: GGAAGCCGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGGCAGACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CAA 90 bp | ATGTCTCTCTGCTCCCGGTCCCCTCTGGTCACGGACTGTGAACGCTaGCTGCCCCGGAACTTCCTGGACAGGAGGCTGAGCTTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: MSLCSRSPLVTDCER*LPRNFLDRRLSLEA Trigger: GGCTTCCAAGCTCAGCCTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTTCACAGTCCGTGACCAGAGGGGACCGGGAGCAGAGAGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS GCA 72 bp | CCGATGGGGACTCTTCGGGCCACCATCTCTAGCGTCTaGCTTCTTCACAGGGCTGGACGACAGGCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PMGTLRATISSV*LLHRAGRQALG Trigger: CCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGGCAGACGCTAGAGATGGTGGCCCGAAGAGTCCCCATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS GCA 72 bp | GGCATGATGGGCAGATCCATCAGGTCCCCAAAGGCCTaGTCGTCAAGGAGTGGGTCAGGTGAGTGGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GMMGRSIRSPKA*SSRSGSGEWGP Trigger: AGGCCCCCACTCACCTGACCCACTCCTTGACGAGCAGGCCTTTGGGGACCTGATGGATCTGCCCATCATGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CCA 72 bp | CGTCTGCCTTCTTCACAGGGCTGGACGACAGGCTCTTaGGCAGCTTGCTCGAGTCCTTCTCCGCGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RLPSSQGWTTGS*AACSSPSPRLP Trigger: AGGAAGCCGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGGCAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS TCA 72 bp | AACGCTTGCTGCCCCGGAACTTCCTGGACAGGAGGCTaGGCTTGGAAGCCGAGGCCTGTTCATCCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: NACCPGTSWTGG*AWKPRPVHPGT Trigger: AGTCCCTGGATGAACAGGCCTCGGCTTCCAAGCTCAGCCTCCTGTCCAGGAAGTTCCGGGGCAGCAAGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 ENSMUST00000153453.2 |
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| CDS CAA 72 bp | TGTTCATCCAGGGACTCGTCGTCTGCCTCCCTGGCCTaGCTAGTGAGGAAAGACGTGTCCCCAAAGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSSRDSSSASLA*LVRKDVSPKAS Trigger: GGACGCCTTTGGGGACACGTCTTTCCTCACTAGCAAGGCCAGGGAGGCAGACGACGAGTCCCTGGATGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 ENSMUST00000153453.2 |
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| CDS CAA 90 bp | CCATCTCTAGCGTCTGCCTTCTTCACAGGGCTGGACGACAGGCTCTaGGGCAGCTTGCTCGAGTCCTTCTCCGCGGCTTCCTTCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: PSLASAFFTGLDDRL*GSLLESFSAASFSL Trigger: CAATGAGAAGGAAGCCGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAAGGCAGACGCTAGAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS CAA 72 bp | TTCTTCACAGGGCTGGACGACAGGCTCTTGGGCAGCTaGCTCGAGTCCTTCTCCGCGGCTTCCTTCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: FFTGLDDRLLGS*LESFSAASFSL Trigger: CAATGAGAAGGAAGCCGCGGAGAAGGACTCGAGCAAGCTGCCCAAGAGCCTGTCGTCCAGCCCTGTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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| CDS GCA 72 bp | AGGCCCCAGGTCGATGTGGAAGGACAGGATCGACTCTaGATGCTTCAGCCCGTAGCTGACTTTGGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: RPQVDVEGQDRL*MLQPVADFGHD Trigger: ATCATGCCCAAAGTCAGCTACGGGCTGAAGCATGCAGAGTCGATCCTGTCCTTCCACATCGACCTGGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 |
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| CDS TCA 72 bp | CTCGAGTCCTTCTCCGCGGCTTCCTTCTCATTGAGCTaGGGCAGGGACATGGCATTCTTGACAAACAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LESFSAASFSLS*GRDMAFLTNSA Trigger: AGCACTGTTTGTCAAGAATGCCATGTCCCTGCCTCAGCTCAATGAGAAGGAAGCCGCGGAGAAGGACTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053536.5 ENSMUST00000106616.2 ENSMUST00000131488.2 |
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