Pregenerated sensors for CDC42EP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049521Ensembl transcript IDs: ENSMUST00000059619.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTGGAGGGAGCTGGGTCAGGTCAGCGGGGACCCATGCCTGCCTTaGATAGACCAGGAAGGATCTGGGGCAACTCCCGTTGACCACATC | + |
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Preference number: 1 (lower is better) Translates to: QWRELGQVSGDPCLP*IDQEGSGATPVDHI Trigger: GATGTGGTCAACGGGAGTTGCCCCAGATCCTTCCTGGTCTATGCAAGGCAGGCATGGGTCCCCGCTGACCTGACCCAGCTCCCTCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR TCA 90 bp | ATGCCTGCCTTGCATAGACCAGGAAGGATCTGGGGCAACTCCCGTTaGCCACATCTTGTAGCTGTTAGGCAAATGAACTCAGCCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: MPALHRPGRIWGNSR*PHLVAVRQMNSAPL Trigger: CAGAGGGGCTGAGTTCATTTGCCTAACAGCTACAAGATGTGGTCAACGGGAGTTGCCCCAGATCCTTCCTGGTCTATGCAAGGCAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCTGTGAGCCCCGAGGCTaGCAGGACCTGGAGCCCATG | + |
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Preference number: 2 (lower is better) Translates to: FPNSQEEKAQVSRGRACLCEPRG*QDLEPM Trigger: CATGGGCTCCAGGTCCTGTCAGCCTCGGGGCTCACA...GAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR TCA 90 bp | CAACTTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGAGCCCCTCTGTTCTGTaGGCCCCGAGGCTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: QLSKLSGGESTGQPWPGLSPSVL*APRLTG Trigger: TCCTGTCAGCCTCGGGGCTCACAGAACAGAGGGGCT...CAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTGGGCCTTTCTCTGGGAACTaGGGAGGAGCCTGGAACCGC | + |
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Preference number: 2 (lower is better) Translates to: LPSSPMGLWGRYWFLAPGPFSGN*GGAWNR Trigger: GCGGTTCCAGGCTCCTCCTCAGTTCCCAGAGAAAGG...CCCAGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCCTTGGGCAGGCAGTATGGGAGGCAGGTCTaGGGTACACAGAAGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: RRRKHRSAVAGPASLGRQYGRQV*GTQKIC Trigger: GCAAATCTTCTGTGTACCCCAGACCTGCCTCCCATA...CTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGGAGCCTGGAACCGCGGACAATGGCCCTATGTaGTCCTTGCCCCAACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SCVTPDLSLGTEEEPGTADNGPM*SLPQPP Trigger: TGGGGGTTGGGGCAAGGACCACATAGGGCCATTGTC...CGCGGTTCCAGGCTCCTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGGAGCCTGGAACCGCGGACCCATGCCTGCCTTaGATAGACCAGGAAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: SCVTPDLSLGTEEEPGTADPCLP*IDQEGS Trigger: AGATCCTTCCTGGTCTATGCAAGGCAGGCATGGGTC...CGCGGTTCCAGGCTCCTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTTGGGGCAACTCCCGTTaGCCACATCTTGTAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: HLPSSPMGLWGRYWFLAPWGNSR*PHLVAV Trigger: AACAGCTACAAGATGTGGTCAACGGGAGTTGCCCCA...AGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCACCTGGGCTTCTTATCGTTGAACATTCCAGGCTGGTTACTCATTAGCTCGGCCCTATGTGGTCCTTaGCCCAACCCCCACCCCACT | + |
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Preference number: 2 (lower is better) Translates to: SHLGFLSLNIPGWLLISSALCGP*PNPHPT Trigger: AGTGGGGTGGGGGTTGGGGCAAGGACCACATAGGGC...CGAGCTAATGAGTAACCAGCCTGGAATGTTCAACGATAAGAAGCCCAGGTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTTTGAACATTCCAGGCTaGTTACTCATTAGCTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: HLPSSPMGLWGRYWFLAPLNIPG*LLISSS Trigger: AGACGAGCTAATGAGTAACCAGCCTGGAATGTTCAA...AGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCTGGGCTTCTTATCGTTGAACATTCCAGGCTGGTTACTCATTAGCTCGACTAGGGAAGTGTCCTaGGGCACAAAGACCATACTG | + |
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Preference number: 2 (lower is better) Translates to: SHLGFLSLNIPGWLLISSTREVS*GTKTIL Trigger: CAGTATGGTCTTTGTGCCCCAGGACACTTCCCTAGT...CGAGCTAATGAGTAACCAGCCTGGAATGTTCAACGATAAGAAGCCCAGGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTTTAACAATCAGGTATCTACTGAGAACACAGTaGAGGCCTTCTGCGGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: ACLLGQADLNREALTIRYLLRTQ*RPSAVA Trigger: AGCTACCGCAGAAGGCCTCCACTGTGTTCTCAGTAG...ATACCTGATTGTTAAAGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTTTAACAATCAGGTATGGTACACAGAAGATTTaGTCCTGTGTCACGCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ACLLGQADLNREALTIRYGTQKI*SCVTPD Trigger: GTCAGGCGTGACACAGGAGCAAATCTTCTGTGTACC...ATACCTGATTGTTAAAGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR GCA 72 bp | CAGTGGAGGGAGCTGGGTCAGGTCAGCGGGGACCCATaGCTGCCTTGCATAGACCAGGAAGGATCTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: QWRELGQVSGDP*LPCIDQEGSGA Trigger: TGCCCCAGATCCTTCCTGGTCTATGCAAGGCAGGCATGGGTCCCCGCTGACCTGACCCAGCTCCCTCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR GCA 72 bp | GAGCTGGGTCAGGTCAGCGGGGACCCATGCCTGCCTTaGATAGACCAGGAAGGATCTGGGGCAACTCCCGTT | + |
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Preference number: 3 (lower is better) Translates to: ELGQVSGDPCLP*IDQEGSGATPV Trigger: AACGGGAGTTGCCCCAGATCCTTCCTGGTCTATGCAAGGCAGGCATGGGTCCCCGCTGACCTGACCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR-3UTR CAA 90 bp | CACCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTGCCGGGCCTGCCTCCTaGGGCAGGCAGATCTTAACA | + |
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Preference number: 3 (lower is better) Translates to: HLPSSPMGLWGRYWFLAPAGPAS*GRQILT Trigger: TGTTAAGATCTGCCTGCCCAAGGAGGCAGGCCCGGC...AGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR GCA 72 bp | CAGTCCCACTCACAGACAATGGCCCTATGTGGTCCTTaGCCCAACCCCCACCCCACTAGGGAAGTGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSHSQTMALCGP*PNPHPTREVSW Trigger: CCAGGACACTTCCCTAGTGGGGTGGGGGTTGGGGCAAGGACCACATAGGGCCATTGTCTGTGAGTGGGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR GCA 72 bp | CAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTaGCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: QEEKAQVSRGRA*LLGQADLNREA Trigger: AGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR TCA 72 bp | ATAGTACTGCTGAGAAGAGAGGATGGGAGGTGCTCCTaGGCCACCCTCTGCATGGGGACCTGTCTCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: IVLLRREDGRCS*ATLCMGTCLPP Trigger: GGGAGGGAGACAGGTCCCCATGCAGAGGGTGGCTCAGGAGCACCTCCCATCCTCTCTTCTCAGCAGTACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR TCA 72 bp | TACTGTCAGACCACAGGGGGTGGCGTAGGTTATAACTaGAGGGCTAGTGGGCCTAGGGACAGTGGAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: YCQTTGGGVGYN*RASGPRDSGGS Trigger: GCTCCCTCCACTGTCCCTAGGCCCACTAGCCCTTCAGTTATAACCTACGCCACCCCCTGTGGTCTGACAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR GCA 72 bp | AGGTATGGGAGGCAGGTCTGGGGTACACAGAAGATTTaGTCCTGTGTCACGCCTGACCTTTCTCTGGGAACT | + |
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Preference number: 3 (lower is better) Translates to: RYGRQVWGTQKI*SCVTPDLSLGT Trigger: AGTTCCCAGAGAAAGGTCAGGCGTGACACAGGAGCAAATCTTCTGTGTACCCCAGACCTGCCTCCCATACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR TCA 72 bp | ACTGCAGATAAGGGTCCCACCTGGGCTTCTTATCGTTaGACATTCCAGGCTGGTTACTCATTAGCTCGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TADKGPTWASYR*TFQAGYSLARL Trigger: CAGACGAGCTAATGAGTAACCAGCCTGGAATGTTCAACGATAAGAAGCCCAGGTGGGACCCTTATCTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR TCA 72 bp | TTGCATAGACCAGGAAGGATCTGGGGCAACTCCCGTTaGCCACATCTTGTAGCTGTTAGGCAAATGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: LHRPGRIWGNSR*PHLVAVRQMNS Trigger: TGAGTTCATTTGCCTAACAGCTACAAGATGTGGTCAACGGGAGTTGCCCCAGATCCTTCCTGGTCTATGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCCTTGGGCAGGCAGCACGCGTGGCAGGCGTaGGATGGTGCAGAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RRRKHRSAVAGPASLGRQHAWQA*DGAEAR Trigger: TCTGGCTTCTGCACCATCTCACGCCTGCCACGCGTG...CTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | TTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCTGGGCACAGGAGCCCTaGCACTGGCTGGAGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: FPNSQEEKAQVSRGRACLWAQEP*HWLEAR Trigger: GCGCGCCTCCAGCCAGTGTCAGGGCTCCTGTGCCCA...GAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | GAGAGGATGGGAGGTGCTCCTGAGCCACCCTCTGCATGGGGACCTGTCTCCCTCGTGGCCTGGTTGAGCTaGGGCAGGGAGATGGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ERMGGAPEPPSAWGPVSLVAWLS*GREMAF Trigger: GAACGCCATCTCCCTGCCTCAGCTCAACCAGGCCAC...GAGGGAGACAGGTCCCCATGCAGAGGGTGGCTCAGGAGCACCTCCCATCCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | CCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTGGGCTTGCCCAGGCTCATaGTGGGGGCTCCTGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PAKQPHGIMGQILVPGTWACPGS*WGLLCP Trigger: GGGGCACAGGAGCCCCCACCATGAGCCTGGGCAAGC...CCAGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| 3UTR CAA 72 bp | GGAGCTGGGTCAGGTCAGCGGGGACCCATGCCTGCCTaGCATAGACCAGGAAGGATCTGGGGCAACTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GAGSGQRGPMPA*HRPGRIWGNSR Trigger: ACGGGAGTTGCCCCAGATCCTTCCTGGTCTATGCAAGGCAGGCATGGGTCCCCGCTGACCTGACCCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | GTCAGCCGTGGCCGGGCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTCTCTCCCAGGAGCCATaGACTTGGGGTAACACCCCT | + |
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Preference number: 4 (lower is better) Translates to: VSRGRACLLGQADLNREALSQEP*TWGNTP Trigger: AGGGGTGTTACCCCAAGTTCATGGCTCCTGGGAGAG...AGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | TTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCCCAGAGCGGCCTCCGTaGTTGCTGAGGAAGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: FPNSQEEKAQVSRGRACLPERPP*LLRKDV Trigger: TACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGG...GAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | CACCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTCCTCTCCCACAGGACTaGGCTTTGCCTCAGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLPSSPMGLWGRYWFLAPPLPQD*ALPQPQ Trigger: CTGCGGCTGAGGCAAAGCCCAGTCCTGTGGGAGAGG...AGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR GCA 90 bp | CCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTGGGGGGCTGATCATGTCTaGTGTCAGGCGTCTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PAKQPHGIMGQILVPGTWGADHV*CQASLS Trigger: GGAAAGAGACGCCTGACAGCAGACATGATCAGCCCC...CCAGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | TCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGGAGCCTGGAACCGCGAGGCGTCTCTTTCCATaGGAACTGGACACCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: SCVTPDLSLGTEEEPGTARRLFP*ELDTHP Trigger: GGGATGGGTGTCCAGTTCCCATGGAAAGAGACGCCT...CGCGGTTCCAGGCTCCTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | CTCAACTTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCCCTGTTGGAGCTTCCTaGCCAGGAAACTTCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LNFPNSQEEKAQVSRGRAPVGAS*PGNFGV Trigger: CACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGG...GGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAAGTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | CTCAACTTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCATGTTGGAGGGTACCTaGGGACCCTCTCCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LNFPNSQEEKAQVSRGRAMLEGT*GPSPTG Trigger: TCCTGTGGGAGAGGGTCCCCAGGTACCCTCCAACAT...GGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAAGTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR GCA 90 bp | ACACAGAAGATTTGCTCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGACGGGATGGGGAGCTTaGCACCGCAGGGGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TQKICSCVTPDLSLGTEETGWGA*HRRGWK Trigger: CTTCCAGCCCCTGCGGTGGCAAGCTCCCCATCCCGT...CTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGAGCAAATCTTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | CAACTTTCCAAACTCTCAGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGTGTCACAGCAGAGGCTaGAAGGCTTGTCACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: QLSKLSGGESTGQPWPGLCHSRG*KACHSI Trigger: GATGCTGTGACAAGCCTTCCAGCCTCTGCTGTGACA...CAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCTGAGAGTTTGGAAAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | ACACAGAAGATTTGCTCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGGGCCTCCGTGGTTGCTaGGGAAGGACGTATCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: TQKICSCVTPDLSLGTEEGLRGC*GRTYLR Trigger: TCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCC...CTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGAGCAAATCTTCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR TCA 90 bp | GCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTTTAACAATCAGGTATCCCCTAGCAGCTCACTaGGGAGTGAGGGCCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: ACLLGQADLNREALTIRYPLAAH*GVRAQG Trigger: ACCTTGGGCCCTCACTCCTCAGTGAGCTGCTAGGGG...ATACCTGATTGTTAAAGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR GCA 90 bp | GCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTTTAACAATCAGGTATGTGGCACCCCGACTCTaGGAACCTGTTGGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ACLLGQADLNREALTIRYVAPRL*EPVGAS Trigger: GGAAGCTCCAACAGGTTCGCAGAGTCGGGGTGCCAC...ATACCTGATTGTTAAAGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CCA 90 bp | TCCCACCTGGGCTTCTTATCGTTGAACATTCCAGGCTGGTTACTCATTAGCTCGACTCTGCGAACCTGTTaGAGCTTCCTGGCCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SHLGFLSLNIPGWLLISSTLRTC*SFLARK Trigger: TTTCCTGGCCAGGAAGCTCCAACAGGTTCGCAGAGT...CGAGCTAATGAGTAACCAGCCTGGAATGTTCAACGATAAGAAGCCCAGGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CAA 90 bp | AGGAGGAGAAAGCACAGGTCAGCCGTGGCCGGGCCTGCCTCCTTGGGCAGGCAGCCCACAGGAGACAGCTaGCCCAGGCTCATGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRRKHRSAVAGPASLGRQPTGDS*PRLMVG Trigger: CCCCACCATGAGCCTGGGCAAGCTGTCTCCTGTGGG...CTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGACCTGTGCTTTCTCCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 90 bp | CCCCAGCTGGCTCCATGCCTGTCAAAGGCCATGTTGGAGGGTACCTaGGGACCCTCTCCCACAGGACTGGGCTTTGCCTCAGCCGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: PQLAPCLSKAMLEGT*GPSPTGLGFASAAG Trigger: CCCTGCGGCTGAGGCAAAGCCCAGTCCTGTGGGAGAGGGTCCCCAGGTACCCTCCAACATGGCCTTTGACAGGCATGGAGCCAGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CAA 90 bp | GTCAGCCGTGGCCGGGCCTGCCTCCTTGGGCAGGCAGATCTTAACAGAGAAGCTCCACAGGACTGGGCTTaGCCTCAGCCGCAGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSRGRACLLGQADLNREAPQDWA*PQPQGP Trigger: TGGGCCCTGCGGCTGAGGCAAAGCCCAGTCCTGTGG...AGCTTCTCTGTTAAGATCTGCCTGCCCAAGGAGGCAGGCCCGGCCACGGCTGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 90 bp | GGAGATGGCGTTCTTGATGATGGGCGAGATGGGAGGCGGAGCAGGTaGTGGTGCAGCCGGGGAAGCCATCCTTCGAGGTGGCACCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: GDGVLDDGRDGRRSR*WCSRGSHPSRWHPD Trigger: GTCGGGGTGCCACCTCGAAGGATGGCTTCCCCGGCTGCACCATCACCTGCTCCGCCTCCCATCTCGCCCATCATCAAGAACGCCATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 90 bp | GCTGGAGGCGCGCTCCAGTCTTCATTCAGACTCTCCCAGGAGCCATaGACTTGGGGTAACACCCCTGCCAGCTCCCGCCGGGCATCCATC | + |
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Preference number: 5 (lower is better) Translates to: AGGALQSSFRLSQEP*TWGNTPASSRRASI Trigger: GATGGATGCCCGGCGGGAGCTGGCAGGGGTGTTACCCCAAGTTCATGGCTCCTGGGAGAGTCTGAATGAAGACTGGAGCGCGCCTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 90 bp | TCCTTCGAGGTGGCACCCCGACTCTGCGAACCTGTTGGAGCTTCCTaGCCAGGAAACTTCGGGGTGAGCGGTGGGTGTTTCCAGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SFEVAPRLCEPVGAS*PGNFGVSGGCFQSG Trigger: GCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGGTTCGCAGAGTCGGGGTGCCACCTCGAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 90 bp | GGCATTGACCTGCACCGAGGTGGGCACAGGAGCCCTGACACTGGCTaGAGGCGCGCTCCAGTCTTCATTCAGACTCTCCCAGGAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: GIDLHRGGHRSPDTG*RRAPVFIQTLPGAM Trigger: CATGGCTCCTGGGAGAGTCTGAATGAAGACTGGAGCGCGCCTCCAGCCAGTGTCAGGGCTCCTGTGCCCACCTCGGTGCAGGTCAATGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 90 bp | TTCGGGGTGAGCGGTGGGTGTTTCCAGAGCGGCCTCCGTGGTTGCTaGGGAAGGACGTATCTCCGAAGACATCCCCACCACGGCCTACGT | + |
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Preference number: 5 (lower is better) Translates to: FGVSGGCFQSGLRGC*GRTYLRRHPHHGLR Trigger: ACGTAGGCCGTGGTGGGGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 90 bp | ACGGTCACGGTCACGGTTGCTGTGCTTTTCCACGCGTGGCAGGCGTaGGATGGTGCAGAAGCCAGACTCCAGGCCGTAACCAGAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TVTVTVAVLFHAWQA*DGAEARLQAVTRVA Trigger: GGCCACTCTGGTTACGGCCTGGAGTCTGGCTTCTGCACCATCTCACGCCTGCCACGCGTGGAAAAGCACAGCAACCGTGACCGTGACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGGATGGGAGGTGCTCCTGAGCCACCCTCTGCATGGGGACCTGTCTCCCCGGTCACGGTCACGGTaGCTGTGCTTTTCCACGCGT | + |
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Preference number: 5 (lower is better) Translates to: KRGWEVLLSHPLHGDLSPRSRSR*LCFSTR Trigger: ACGCGTGGAAAAGCACAGCAACCGTGACCGTGACCG...GGGAGACAGGTCCCCATGCAGAGGGTGGCTCAGGAGCACCTCCCATCCTCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 90 bp | GACTCTGCGAACCTGTTGGAGCTTCCTGGCCAGGAAACTTCGGGGTaGGCGGTGGGTGTTTCCAGAGCGGCCTCCGTGGTTGCTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: DSANLLELPGQETSG*AVGVSRAASVVAEE Trigger: TTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGGTTCGCAGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS GCA 90 bp | GCTCTCGGTCTTGAGAATGGTCCGGGTCACGGTCACGGTCACGGTTaGTGTGCTTTTCCACGCGTGGCAGGCGTGAGATGGTGCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ALGLENGPGHGHGHG*CAFPRVAGVRWCRS Trigger: GCTTCTGCACCATCTCACGCCTGCCACGCGTGGAAAAGCACAGCAACCGTGACCGTGACCGTGACCCGGACCATTCTCAAGACCGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 90 bp | AGGAAACTTCGGGGTGAGCGGTGGGTGTTTCCAGAGCGGCCTCCGTaGTTGCTGAGGAAGGACGTATCTCCGAAGACATCCCCACCACGG | + |
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Preference number: 5 (lower is better) Translates to: RKLRGERWVFPERPP*LLRKDVSPKTSPPR Trigger: CCGTGGTGGGGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 90 bp | CGAACCTGTTGGAGCTTCCTGGCCAGGAAACTTCGGGGTGAGCGGTaGGTGTTTCCAGAGCGGCCTCCGTGGTTGCTGAGGAAGGACGTA | + |
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Preference number: 5 (lower is better) Translates to: RTCWSFLARKLRGER*VFPERPPWLLRKDV Trigger: TACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGGTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CAA 90 bp | CCTGCCAAGCAGCCCCATGGGATTATGGGGCAGATACTGGTTCCTGGCACCTGGCAGGGGCTGGAAGGCTaGTCACAGCAGAGGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: PAKQPHGIMGQILVPGTWQGLEG*SQQRLE Trigger: TTCCAGCCTCTGCTGTGACAAGCCTTCCAGCCCCTG...CCAGGTGCCAGGAACCAGTATCTGCCCCATAATCCCATGGGGCTGCTTGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS-3UTR CAA 90 bp | ACACAGAAGATTTGCTCCTGTGTCACGCCTGACCTTTCTCTGGGAACTGAGGAGGAGCGGCCTCCGTGGTaGCTGAGGAAGGACGTATCT | + |
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Preference number: 5 (lower is better) Translates to: TQKICSCVTPDLSLGTEEERPPW*LRKDVS Trigger: AGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTC...CTCCTCAGTTCCCAGAGAAAGGTCAGGCGTGACACAGGAGCAAATCTTCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | TGGAGCTTCCTGGCCAGGAAACTTCGGGGTGAGCGGTaGGTGTTTCCAGAGCGGCCTCCGTGGTTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: WSFLARKLRGER*VFPERPPWLLR Trigger: CCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | CTGCACCGAGGTGGGCACAGGAGCCCTGACACTGGCTaGAGGCGCGCTCCAGTCTTCATTCAGACTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LHRGGHRSPDTG*RRAPVFIQTLP Trigger: TGGGAGAGTCTGAATGAAGACTGGAGCGCGCCTCCAGCCAGTGTCAGGGCTCCTGTGCCCACCTCGGTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 72 bp | GTTCTTGATGATGGGCGAGATGGGAGGCGGAGCAGGTaGTGGTGCAGCCGGGGAAGCCATCCTTCGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLDDGRDGRRSR*WCSRGSHPSRW Trigger: CCACCTCGAAGGATGGCTTCCCCGGCTGCACCATCACCTGCTCCGCCTCCCATCTCGCCCATCATCAAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS GCA 72 bp | GAATGGTCCGGGTCACGGTCACGGTCACGGTTGCTGTaGTTTTCCACGCGTGGCAGGCGTGAGATGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EWSGSRSRSRLL*FSTRGRREMVQ Trigger: CTGCACCATCTCACGCCTGCCACGCGTGGAAAAGCACAGCAACCGTGACCGTGACCGTGACCCGGACCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | CGGGGTGAGCGGTGGGTGTTTCCAGAGCGGCCTCCGTaGTTGCTGAGGAAGGACGTATCTCCGAAGACATCC | + |
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Preference number: 6 (lower is better) Translates to: RGERWVFPERPP*LLRKDVSPKTS Trigger: GGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | GTGGCACCCCGACTCTGCGAACCTGTTGGAGCTTCCTaGCCAGGAAACTTCGGGGTGAGCGGTGGGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VAPRLCEPVGAS*PGNFGVSGGCF Trigger: GAAACACCCACCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGGTTCGCAGAGTCGGGGTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | ATCCTTCGAGGTGGCACCCCGACTCTGCGAACCTGTTaGAGCTTCCTGGCCAGGAAACTTCGGGGTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: ILRGGTPTLRTC*SFLARKLRGER Trigger: CCGCTCACCCCGAAGTTTCCTGGCCAGGAAGCTCCAACAGGTTCGCAGAGTCGGGGTGCCACCTCGAAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CAA 90 bp | AAACTTCGGGGTGAGCGGTGGGTGTTTCCAGAGCGGCCTCCGTGGTaGCTGAGGAAGGACGTATCTCCGAAGACATCCCCACCACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KLRGERWVFPERPPW*LRKDVSPKTSPPRP Trigger: AGGCCGTGGTGGGGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACCCCGAAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 72 bp | AGCGGTGGGTGTTTCCAGAGCGGCCTCCGTGGTTGCTaGGGAAGGACGTATCTCCGAAGACATCCCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SGGCFQSGLRGC*GRTYLRRHPHH Trigger: GTGGTGGGGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CAA 72 bp | GGTGAGCGGTGGGTGTTTCCAGAGCGGCCTCCGTGGTaGCTGAGGAAGGACGTATCTCCGAAGACATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GERWVFPERPPW*LRKDVSPKTSP Trigger: TGGGGATGTCTTCGGAGATACGTCCTTCCTCAGCAACCACGGAGGCCGCTCTGGAAACACCCACCGCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS TCA 72 bp | GTAGGCTCAGAGGGGAAAGAACTTTGCTCTCGGTCTTaGGAATGGTCCGGGTCACGGTCACGGTCACGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VGSEGKELCSRS*EWSGSRSRSRL Trigger: CAACCGTGACCGTGACCGTGACCCGGACCATTCTCAAGACCGAGAGCAAAGTTCTTTCCCCTCTGAGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CCA 72 bp | GGGCTGATCATGTCTGCTGTCAGGCGTCTCTTTCCATaGGAACTGGACACCCATCCCACAGGAGACAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLIMSAVRRLFP*ELDTHPTGDSL Trigger: CAAGCTGTCTCCTGTGGGATGGGTGTCCAGTTCCCATGGAAAGAGACGCCTGACAGCAGACATGATCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CAA 72 bp | GGTAGGCTCAGAGGGGAAAGAACTTTGCTCTCGGTCTaGAGAATGGTCCGGGTCACGGTCACGGTCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: GRLRGERTLLSV*RMVRVTVTVTV Trigger: AACCGTGACCGTGACCGTGACCCGGACCATTCTCAAGACCGAGAGCAAAGTTCTTTCCCCTCTGAGCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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| CDS CAA 72 bp | GGGCTGGAAGGCTTGTCACAGCAGAGGCTGGAAGGCTaGTCACAGCATCTAGAGTGGTTATCGCATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLEGLSQQRLEG*SQHLEWLSHGL Trigger: CAGCCCATGCGATAACCACTCTAGATGCTGTGACAAGCCTTCCAGCCTCTGCTGTGACAAGCCTTCCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059619.3 |
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