RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42BPB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021279

Ensembl transcript IDs: ENSMUST00000041965.5, ENSMUST00000220657.2, ENSMUST00000222196.2, ENSMUST00000222724.2

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCATGGCTCCCCAGGCTCCGGCTGCCTCTGAACTCAGGAGGCCATaGGCCTGCCTTCCCCACCGTGTGCTGGCCTGTGGCAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GMAPQAPAASELRRP*ACLPHRVLACGSCR
Trigger: CCTGCAGCTGCCACAGGCCAGCACACGGTGGGGAAGGCAGGCCCATGGCCTCCTGAGTTCAGAGGCAGCCGGAGCCTGGGGAGCCATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 90 bp GCTCCCCAGGCTCCGGCTGCCTCTGAACTCAGGAGGCCATGGGCCTaGCTTCCCCACCGTGTGCTGGCCTGTGGCAGCTGCAGGCACACT +
Preference number: 1 (lower is better)
Translates to: APQAPAASELRRPWA*LPHRVLACGSCRHT
Trigger: AGTGTGCCTGCAGCTGCCACAGGCCAGCACACGGTGGGGAAGGCAGGCCCATGGCCTCCTGAGTTCAGAGGCAGCCGGAGCCTGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 90 bp GGGTGGGTGGGGCAGGCAGCAGGTGCTGGGTGTGACACGCAGGCTTaGCCTGCTGTGCCACCACCCTCAGTGCCAACTCGGCCAAGTGCT +
Preference number: 1 (lower is better)
Translates to: GWVGQAAGAGCDTQA*PAVPPPSVPTRPSA
Trigger: AGCACTTGGCCGAGTTGGCACTGAGGGTGGTGGCACAGCAGGCCAAGCCTGCGTGTCACACCCAGCACCTGCTGCCTGCCCCACCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 90 bp AGGCCATGGGCCTGCCTTCCCCACCGTGTGCTGGCCTGTGGCAGCTaGAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGA +
Preference number: 1 (lower is better)
Translates to: RPWACLPHRVLACGS*RHTGSQRTATFTAG
Trigger: TCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACGGTGGGGAAGGCAGGCCCATGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 90 bp CTGCCTTCCCCACCGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTaGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCA +
Preference number: 1 (lower is better)
Translates to: LPSPPCAGLWQLQAH*EPAHSYLHSRRGIS
Trigger: TGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACGGTGGGGAAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 90 bp GGCAGGCAGCAGGTGCTGGGTGTGACACGCAGGCTTGGCCTGCTGTaGCACCACCCTCAGTGCCAACTCGGCCAAGTGCTCACCCTGAAT +
Preference number: 1 (lower is better)
Translates to: GRQQVLGVTRRLGLL*HHPQCQLGQVLTLN
Trigger: ATTCAGGGTGAGCACTTGGCCGAGTTGGCACTGAGGGTGGTGGCACAGCAGGCCAAGCCTGCGTGTCACACCCAGCACCTGCTGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 90 bp CAGGACACAGGCGGCCGGTCAGCAGCTGCCTGTGTCAGGGTTAAGTaGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGTGGCACTGG +
Preference number: 1 (lower is better)
Translates to: QDTGGRSAAACVRVK*MKRPPTTLCLLWHW
Trigger: CCAGTGCCACAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGACCGGCCGCCTGTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR TCA 90 bp ACACAGGCGGCCGGTCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATaGAAAGGCCACCAACTACCCTCTGCCTTCTGTGGCACTGGGATG +
Preference number: 1 (lower is better)
Translates to: TQAAGQQLPVSGLSG*KGHQLPSAFCGTGM
Trigger: CATCCCAGTGCCACAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGACCGGCCGCCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR TCA 90 bp TCGTGTCACCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATaGGGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCA +
Preference number: 1 (lower is better)
Translates to: SCHQARQRGREACPR*GQDMSAATVNRQPS
Trigger: TGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGGTGACACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 90 bp TGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTaGAGACGAACACATCTGGTCGATCGCCACCAACAATGTGGCACA +
Preference number: 1 (lower is better)
Translates to: WWSFMCKRNSVASRL*RRTHLVDRHQQCGT
Trigger: TGTGCCACATTGTTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR-3UTR CCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCGGAAGCCGGTGGATGTaGGCCTGGGTGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVGSRWM*AWVVLG
Trigger: CCCCAGGACCACCCAGGCCCACATCCACCGGCTTCC...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR-3UTR TCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTACCCCAGCATCTGCTaGGGAAGCCGGTGGATGTGG +
Preference number: 2 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCYPSIC*GSRWMW
Trigger: CCACATCCACCGGCTTCCTCAGCAGATGCTGGGGTA...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR-3UTR TCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGCGGGCCTGGTGCTGCTaGTGTGCAGGAGTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQRAWCC*CAGVLG
Trigger: GCCCAACACTCCTGCACATCAGCAGCACCAGGCCCG...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CAA 90 bp GGGGGAGGGGTGAGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTaGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACC +
Preference number: 2 (lower is better)
Translates to: GGGVSGGPSCANGTV*PRGCADEHIWSIAT
Trigger: GGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACTCACCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAATTCCTTGGACAACACTaGAGAGTCGTCAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQFLGQH*RVVSSA
Trigger: GGCTGAGCTGACGACTCTCCAGTGTTGTCCAAGGAA...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CAA 90 bp CTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTaGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCC +
Preference number: 2 (lower is better)
Translates to: LPSVALGWRTLVFVG*RHLQERGKVLRPYP
Trigger: GGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR-3UTR CCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGTCGCCACCAACAATGTaGCACAAAACTGGTCATTAT +
Preference number: 2 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVSPPTM*HKTGHY
Trigger: ATAATGACCAGTTTTGTGCCACATTGTTGGTGGCGA...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 72 bp GCCTGCCTTCCCCACCGTGTGCTGGCCTGTGGCAGCTaGAGGCACACTGGGAGCCAGCGCACAGCTACCTTC +
Preference number: 3 (lower is better)
Translates to: ACLPHRVLACGS*RHTGSQRTATF
Trigger: GAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACGGTGGGGAAGGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 72 bp GGGCAGGCAGCAGGTGCTGGGTGTGACACGCAGGCTTaGCCTGCTGTGCCACCACCCTCAGTGCCAACTCGG +
Preference number: 3 (lower is better)
Translates to: GQAAGAGCDTQA*PAVPPPSVPTR
Trigger: CCGAGTTGGCACTGAGGGTGGTGGCACAGCAGGCCAAGCCTGCGTGTCACACCCAGCACCTGCTGCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 72 bp CCACCGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTaGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: PPCAGLWQLQAH*EPAHSYLHSRR
Trigger: CCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACGGTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 72 bp AGGAGTGTTGGGCGATTCTGTGACACACAGGCTCCATaGAGGGCGAGGGGATGTCACAGGGCCTGGGGCATG +
Preference number: 3 (lower is better)
Translates to: RSVGRFCDTQAP*RARGCHRAWGM
Trigger: CATGCCCCAGGCCCTGTGACATCCCCTCGCCCTGCATGGAGCCTGTGTGTCACAGAATCGCCCAACACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR GCA 72 bp ACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTaGAGGAGTGTTGGGCGATTCTGTGACACACAGGCT +
Preference number: 3 (lower is better)
Translates to: TLVALPGLVLLM*RSVGRFCDTQA
Trigger: AGCCTGTGTGTCACAGAATCGCCCAACACTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 72 bp GCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCATaGCTGTGGCCCAGAATGGACGGACACAGGACACAG +
Preference number: 3 (lower is better)
Translates to: AHSYLHSRRGIS*LWPRMDGHRTQ
Trigger: CTGTGTCCTGTGTCCGTCCATTCTGGGCCACAGCCATGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR TCA 72 bp GCCGGTCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATaGAAAGGCCACCAACTACCCTCTGCCTTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: AGQQLPVSGLSG*KGHQLPSAFCG
Trigger: GCCACAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR TCA 72 bp CAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATaGGGACAGGACATGTCTGCTGCCACAGTTAATCGC +
Preference number: 3 (lower is better)
Translates to: QARQRGREACPR*GQDMSAATVNR
Trigger: GCGATTAACTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 72 bp ACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTaGTCGATCGCCACCAACAATGTGGCACAAAACTGG +
Preference number: 3 (lower is better)
Translates to: TVLPRGCADEHI*SIATNNVAQNW
Trigger: CCAGTTTTGTGCCACATTGTTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CCA 72 bp TATTTTATCTATCTACAAACTGATTCTACATTTCCTTaGACAACACTGGAGAGTCGTCAGCTCAGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: YFIYLQTDSTFP*TTLESRQLSLG
Trigger: GCCAAGGCTGAGCTGACGACTCTCCAGTGTTGTCCAAGGAAATGTAGAATCAGTTTGTAGATAGATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCGCTTCGGTCCAGCCATaGCGAGGGCCTGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVLACGSCRHTGSQRTATASVQP*RGPACW
Trigger: CCAGCACGCAGGCCCTCGCCATGGCTGGACCGAAGC...GGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGGGGCGAGTTGGGGCTTaGGGGGCCGCTAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AAAGTLGASAQLPSQQEGGRVGA*GAARVG
Trigger: TCCAACCCTAGCGGCCCCCCAAGCCCCAACTCGCCC...CCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTTCCGACGCGGCCCCTaGCCCCCGGCCTCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCFRRGP*PPASLL
Trigger: AAGCAAGGAGGCCGGGGGCCAGGGGCCGCGTCGGAA...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGGCCCGTCCCCCTGGATaGTCAACAGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVARPPG*STERTQ
Trigger: CTGGGTTCTCTCTGTTGAGCATCCAGGGGGACGGGC...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCCGAGGGCCTGCGTGCTaGGCAGTGGCACAGGAGACG +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCRGPAC*AVAQET
Trigger: CGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCG...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGGCTTGCTCCTGGATaGCGGCTGCCGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGGLAPG*RLPGEA
Trigger: GGCCTCCCCCGGCAGCCGCCATCCAGGAGCAAGCCC...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCCTTCACGAGCTGGGTaGAAGGCTTGGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPPSRAG*KAWPTR
Trigger: TCGAGTGGGCCAAGCCTTTCACCCAGCTCGTGAAGG...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCATAGTGCAGAGCCGTaGTCCACTGGCAGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPHSAEP*STGSRR
Trigger: ACGGCGACTGCCAGTGGATCACGGCTCTGCACTATG...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGTCCTTGTCCCGGAGCTaGCGGGACACCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAAGTLGASAQLPSQQEGSLSRS*RDTFCF
Trigger: GAAGCAGAAGGTGTCCCGTCAGCTCCGGGACAAGGA...CCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCGCGTCCCTGTCGCTATaGGCTGGCAGCCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VVSSALALMLGPFGLPGPASLSL*AGSPLF
Trigger: AAACAAAGGGCTGCCAGCTCATAGCGACAGGGACGC...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGC +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCRRPMV*THSMVR
Trigger: GCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCG...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGAGAGGCCTCTTGGACTaGTCAGGAGGTATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVRGLLD*SGGMGH
Trigger: GTGCCCCATACCTCCTGAGCAGTCCAAGAGGCCTCT...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCGGCCACATGAGCTCCTaGATGCGTGACCTCCGACCT +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPGHMSS*MRDLRP
Trigger: AGGTCGGAGGTCACGCATGCAGGAGCTCATGTGGCC...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGCCGGGGGAGGCCTGCTaGGGTAGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGPGEAC*GRALLL
Trigger: GAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGG...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCTCCCAGTGCGCAACTaGCTCCTTCTTGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPLPVRN*LLLGCQ
Trigger: CTGGCATCCAAGAAGGAGTCAGTTGCGCACTGGGAG...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCCGTCAGGATGAGCAGTaGGCTGGTCTTAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VVSSALALMLGPFGLPGPRQDEQ*AGLRRR
Trigger: TCGCCTTCTAAGACCAGCTCACTGCTCATCCTGACG...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACAGCCCAGCAGGTTaGGGCTGCCATCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPHSPAG*GCHQSS
Trigger: TGAACTCTGATGGCAGCCTCAACCTGCTGGGCTGTG...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTCAGGGCGCTATCGTTaGGCCACGGCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVSGRYR*ATARPG
Trigger: TCCTGGACGGGCCGTGGCGCAACGATAGCGCCCTGA...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCCCATCCTCCATGGCCTaGAGGATCTCTGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: VVSSALALMLGPFGLPGPPSSMA*RISGEM
Trigger: CATCTCACCAGAGATCCTGCAGGCCATGGAGGATGG...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCAGAGGCCTCGGCAGCTaGGTCCTCAAGCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCRGLGS*VLKPSF
Trigger: GAAGCTCGGCTTGAGGACGCAGCTGCCGAGGCCTCT...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGTTTACTTCTAGCACGTaGGAGGCCTCTCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: AAAGTLGASAQLPSQQEGFTSST*EASRRT
Trigger: GGTGCGCCGAGAGGCCTCCCACGTGCTAGAAGTAAA...CCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAACCGGGGGAGGCCTGCTaGGGTAGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQPGEAC*GRALLL
Trigger: GAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGG...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GTAGGGTTGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCCAGCGGGCTTGCTCCTGGATaGCGGCTGCCGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGLRHLQERGKVLRPYPSGLAPG*RLPGEA
Trigger: GGCCTCCCCCGGCAGCCGCCATCCAGGAGCAAGCCC...GCTGGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCATTCGCTGTACACTGTaGCATGGGTGGGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPIRCTL*HGWGCN
Trigger: GTTGCAGCCCCACCCATGTCACAGTGTACAGCGAAT...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAATGGCGAGGGCCTGCGTaGTGGGCAGTGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQWRGPA*WAVAQE
Trigger: CTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCA...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCCGTACAGGAAGAGTTTaGAGTCACAGACCACGGCGT +
Preference number: 4 (lower is better)
Translates to: RVLACGSCRHTGSQRTATRTGRV*SHRPRR
Trigger: ACGCCGTGGTCTGTGACTGCAAACTCTTCCTGTACG...GGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGAGGGCATCGAAAGACTaGTGTGAGAGGAACGCGAGC +
Preference number: 4 (lower is better)
Translates to: AAAGTLGASAQLPSQQEGRASKD*CERNAS
Trigger: GCTCGCGTTCCTCTCACAGCAGTCTTTCGATGCCCT...CCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCAGGTCGGGGTCGGACATaGTCCTCAGAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPGRGRT*SSEAQA
Trigger: TGCCTGTGCCTCTGAGGAGCATGTCCGACCCCGACC...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGACTGTGTCCTCCAGCTaGCGTTCGAGCCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVTVSSS*RSSLFE
Trigger: TTCAAACAGGCTCGAACGCCAGCTGGAGGACACAGT...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCATGGCTGTGGCCCGCCAAGAGGCCTCTTaGACTGCTCAGGAGGTATGG +
Preference number: 4 (lower is better)
Translates to: GASAQLPSQQEGHLMAVARQEAS*TAQEVW
Trigger: CCATACCTCCTGAGCAGTCCAAGAGGCCTCTTGGCG...GGCCACAGCCATGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGCTGTACACTGTGACATaGGTGGGGCTGCAACTACAG +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVLYTVT*VGLQLQ
Trigger: CTGTAGTTGCAGCCCCACCCATGTCACAGTGTACAG...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGGCCCGTGTGGAACCGTaGAGGGACTGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQARVEP*RDCTVW
Trigger: CCAGACTGTGCAGTCCCTTCACGGTTCCACACGGGC...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCCACAGAGCCTGTCCTTaGACACGGCCATCCACTGCA +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCHRACP*TRPSTA
Trigger: TGCAGTGGATGGCCGTGTTCAAGGACAGGCTCTGTG...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCACAGTCCCATGTGGCTaGAGCAAAGCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPTVPCG*SKAGTP
Trigger: AGGAGTACCTGCTTTGCTTCAGCCACATGGGACTGT...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGCGTGACCTCCGACCTTaGGGGTCCACGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVRDLRP*GSTYSP
Trigger: GGGACTGTACGTGGACCCTCAAGGTCGGAGGTCACG...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGCAGCTGGCCCTGGGGTaGCAGGTACGAAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGQLALG*QVRSAL
Trigger: GAGAGCACTTCGTACCTGTCACCCCAGGGCCAGCTG...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCATGGAGTCGATCTTCTaGATGGCCACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPMESIF*MATSIS
Trigger: GGAGATGGAGGTGGCCATGCAGAAGATCGACTCCAT...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCATGGCTGTGGCCATCTGCGCCTCCCAGTaGGCAACTGACTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GASAQLPSQQEGHLMAVAICASQ*ATDSFL
Trigger: CAAGAAGGAGTCAGTTGCGCACTGGGAGGCGCAGAT...GGCCACAGCCATGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGCTCCTGGACAGTGGGTaGAGCACTCAGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MRFNTRGTPGPGAADVQELLDSG*STQRQV
Trigger: GACCTGCCTCTGAGTGCTGCACCCACTGTCCAGGAG...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGGTCGGGGTCGGACATaGTCCTCAGAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGGRGRT*SSEAQA
Trigger: TGCCTGTGCCTCTGAGGAGCATGTCCGACCCCGACC...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCATCGGTGACATGGGATaGGAACTGAAACCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPIGDMG*ELKPLL
Trigger: GAGGAGCGGTTTCAGTTCCCATCCCATGTCACCGAT...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTTCTGCAGGGCCAACTaGTGGCTTTCGGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCFCRAN*WLSESW
Trigger: CCACGACTCCGAAAGCCACCAGTTGGCCCTGCAGAA...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCGAAGCCTGTGTTTCCTaGTCACTAGCTGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VVSSALALMLGPFGLPGPEACVS*SLAELV
Trigger: AACCAGCTCAGCTAGTGACCAGGAAACACAGGCTTC...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCAGGTCCAAGACTTGACTaGCAACGACACCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPGPRLD*QRHRAG
Trigger: CCCAGCCCGGTGTCGTTGCCAGTCAAGTCTTGGACC...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGACGTACAGTCCCATGTaGCTGAAGCAAAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVTYSPM*LKQSRY
Trigger: GTACCTGCTTTGCTTCAGCCACATGGGACTGTACGT...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTCTCCTCCTGGACAGTaGGTGCAGCACTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCSPPGQ*VQHSEA
Trigger: TGCCTCTGAGTGCTGCACCCACTGTCCAGGAGGAGA...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTCAGGCGTCACAGGATaGCTGGTCCAGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCSGVTG*LVQAFH
Trigger: ATGGAAGGCCTGGACCAGCCATCCTGTGACGCCTGA...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CAA 72 bp TTCCTTGGACAACACTGGAGAGTCGTCAGCTCAGCCTaGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLGQHWRVVSSA*ALMLGPFGLPG
Trigger: GCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACTCTCCAGTGTTGTCCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCGAGCCACCAGCTCACTaGACTTCCTGTGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCEPPAH*TSCGKA
Trigger: AGCCTTTCCACAGGAAGTTCAGTGAGCTGGTGGCTC...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGTCAGAGGCAGGTCCATaGGCACCTGCATGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGSEAGP*APACHP
Trigger: GGGATGGCATGCAGGTGCTCATGGACCTGCCTCTGA...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACCCGTCCAGGAGCAGCTaGTCCAGCTTCTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADPSRSS*SSFLSR
Trigger: GCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGG...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGGCAGCGCCGAGTGGCTaGACTCGGTGTAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQAAPSG*TRCKGT
Trigger: TGTGCCTTTACACCGAGTGCAGCCACTCGGCGCTGC...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCAGATGTAGTCAGGTGTaGCCACGGCCACGGAAGACT +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCRCSQV*PRPRKT
Trigger: AGTCTTCCGTGGCCGTGGGCACACCTGACTACATCT...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCCCTCCTGCTGCTCTGTaGTCGTGGCTACAGACACTG +
Preference number: 4 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVPPAAL*SWLQTL
Trigger: CAGTGTCTGTAGCCACGAGCACAGAGCAGCAGGAGG...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGCGACCATCAAGGACGTaGAGTGGCTGCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVRPSRT*SGCTGW
Trigger: CCACCCAGTGCAGCCACTGCACGTCCTTGATGGTCG...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGAGGTCCATGAGCACCTaGATGCCATCCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVRSMST*MPSPGP
Trigger: GGGTCCTGGGGATGGCATGCAGGTGCTCATGGACCT...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGAGGTCCATGAGCACCTaGATGCCATCCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGRSMST*MPSPGP
Trigger: GGGTCCTGGGGATGGCATGCAGGTGCTCATGGACCT...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGCTCCTGGACAGTGGGTaGAGCACTCAGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGLLDSG*STQRQV
Trigger: GACCTGCCTCTGAGTGCTGCACCCACTGTCCAGGAG...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGTGGCGATCTTCTCCTTaGGCGCCAGCTCGATCTGGT +
Preference number: 4 (lower is better)
Translates to: MRFNTRGTPGPGAADVQEWRSSP*APARSG
Trigger: ACCAGATCGAGCTGGCGCCCAAGGAGAAGATCGCCA...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAAGGCGGCCCGTCCCCCTaGATGCTCAACAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQGGPSP*MLNREN
Trigger: GTTCTCTCTGTTGAGCATCCAGGGGGACGGGCCGCC...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCGGTTGGATATCATTTTaGATCGCAGTTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RVLACGSCRHTGSQRTATGWISF*IAVRGL
Trigger: GAGACCCCGAACTGCGATCCAAAATGATATCCAACC...GGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGCCCTGCTTCTCCTCCTaGACAGTGGGTGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGPCFSS*TVGAAL
Trigger: GAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGG...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp GCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGGGGAGCTGGCTCCGATaGGGCGAGTTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ACVRVKWMKRPPTTLCLLGSWLR*GELGLG
Trigger: CCCAAGCCCCAACTCGCCCCATCGGAGCCAGCTCCC...CAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGCAGTTCTCCACCAGCTaGCCCTGGGGTGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGQFSTS*PWGDRY
Trigger: GTACCTGTCACCCCAGGGCCAGCTGGTGGAGAACTG...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGTCAGCCAGGCGGATGTaGCCGTTCACATCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: MRFNTRGTPGPGAADVQESARRM*PFTSRR
Trigger: CCTTCTAGATGTGAACGGTCACATCCGCCTGGCTGA...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGGAGCCGCAGGCCACATaGGCTCCTGCATGCGTGACC +
Preference number: 4 (lower is better)
Translates to: ACVRVKWMKRPPTTLCLLEPQAT*APACVT
Trigger: GGTCACGCATGCAGGAGCTCATGTGGCCTGCGGCTC...CAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGCTGCAGGCTCTGTGCTaGGGCCATTATATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGLQALC*GHYIPG
Trigger: GCCTGGGATATAATGGCCTCAGCACAGAGCCTGCAG...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGACTCGGGCCCGTATTTaGCCATGCCATCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVTRARI*PCHPPW
Trigger: CCATGGAGGATGGCATGGGCAAATACGGGCCCGAGT...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCATGGCTGTGGCCTCGTACGCTTCGATCTaGAAGCTGTTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GASAQLPSQQEGHLMAVASYASI*KLFSKS
Trigger: GGACTTGGAGAACAGCTTGCAGATCGAAGCGTACGA...GGCCACAGCCATGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGAATTCTTCCTTCTCCTaGCGGGCCAGGCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVNSSFS*RARRYC
Trigger: GCAGTACCGCCTGGCCCGGCAGGAGAAGGAAGAATT...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGAGCTCTGAGAACTCCTaGAGGGCCCGTTTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQSSENS*RARFRC
Trigger: GCAGCGAAAACGGGCCCTGCAGGAGTTCTCAGAGCT...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCACTTGTCCTTCACGGTaGCTATGGCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCTCPSR*LWPPPS
Trigger: AGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGT...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCGAACCCACTCCATGGTaGGCACGTCGAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVEPTPW*ARRRHP
Trigger: TGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTC...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTCAGCATCTGCTTCTTaGTGTTGTCCGAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: DTGRDEVQHSWHSRAWCCSASAS*CCPRCR
Trigger: CCGACACCTCGGACAACAGCAAGAAGCAGATGCTGA...GCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGCACTGTCTCCACTCTaGAGGCCCTGTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGALSPL*RPCVAI
Trigger: TATGGCCACACAGGGCCTGCAGAGTGGAGACAGTGC...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGAGAGGGGCTAAGGGCTaGCCTCTCATCTGTACGGTG +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGRGAKG*PLICTV
Trigger: CACCGTACAGATGAGAGGGCAGCCCTTAGCCCCTCT...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAACCTTCAGCCGGTGTGTaGAGTCCTCATGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQPSAGV*SPHAPG
Trigger: GCCAGGAGCATGAGGACTCCACACACCGGCTGAAGG...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGACTGCGTGCTGGGCAGTaGCACAGGAGACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRLRAGQ*HRRRPL
Trigger: CAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAG...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCCCTGTCGCTATGAGCTaGCAGCCCTTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: NGTVLPRGCADEHIWSIAPVAMS*QPFVSG
Trigger: CCCGGAAACAAAGGGCTGCCAGCTCATAGCGACAGG...GGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGTCTCCTCCTGGACAGTaGGTGCAGCACTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGSPPGQ*VQHSEA
Trigger: TGCCTCTGAGTGCTGCACCCACTGTCCAGGAGGAGA...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGAGCTGCTCCAGCTTCTTaGGCCGCACCTTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRAAPAS*AAPWPT
Trigger: TGTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGC...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGAGCTCCAGCTTCTCCTaGTCCAGCCTCCGTATCCTT +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVSSSFS*SSLRIL
Trigger: AAGGATACGGAGGCTGGAGCAGGAGAAGCTGGAGCT...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGGAAGCCTCAACCAATTaGTTGTGCAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSALALMLGPFGLPGPTVEASTN*LCNSSF
Trigger: GAAGGAAGAATTGCACAAGCAATTGGTTGAGGCTTC...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTTATGCAAGATGGCCTaGAGCCCTTCAAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCLCKMA*SPSRIP
Trigger: AGGGATCCTTGAAGGGCTGCAGGCCATCTTGCATAA...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGAGGGACTGCACAGTCTaGGTGGATTCTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MRFNTRGTPGPGAADVQERDCTV*VDSCSF
Trigger: GAAGCTGCAAGAATCCACCCAGACTGTGCAGTCCCT...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAATGCAGGGCCAACTGGTaGCTTTCGGAGTCGTGGACT +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQCRANW*LSESWT
Trigger: AGTCCACGACTCCGAAAGCCACCAGTTGGCCCTGCA...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGTCTGAACCCACTCCATaGTGCGCACGTCGAAGACAT +
Preference number: 4 (lower is better)
Translates to: MRFNTRGTPGPGAADVQESEPTP*CARRRH
Trigger: ATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGA...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACACATGGGATGGGAACTaGAACCGCTCCTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADTWDGN*NRSSWF
Trigger: GAACCACGAGGAGCGGTTTCAGTTCCCATCCCATGT...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGGACATGTCCAGCTTCTaGCTCCGACGAACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQDMSSF*LRRTFQ
Trigger: CTGGAAAGTTCGTCGGAGTCAGAAGCTGGACATGTC...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTCAGAGGCAGGTCCATaGGCACCTGCATGCCATCCC +
Preference number: 4 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGSEAGP*APACHP
Trigger: GGGATGGCATGCAGGTGCTCATGGACCTGCCTCTGA...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCCTGCAATTCCAGCCGTaGAGACATGTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NGTVLPRGCADEHIWSIALQFQP*RHVQLL
Trigger: CAGAAGCTGGACATGTCTGCACGGCTGGAATTGCAG...GGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGCCATATCCTCCTGCTaGTCTGTGCTCGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADAISSC*SVLVAT
Trigger: TGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGC...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGTCAGCATCTGCTTCTTaGTGTTGTCCGAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGSASAS*CCPRCR
Trigger: CCGACACCTCGGACAACAGCAAGAAGCAGATGCTGA...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp GCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGAGAGCCGTGATCCACTaGCAGTCGCCGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: ACVRVKWMKRPPTTLCLLRAVIH*QSPFTS
Trigger: GCTGGTGAACGGCGACTGCCAGTGGATCACGGCTCT...CAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAGTCCTCATGCTCCTaGCGAAGTGTCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADESSCS*RSVTVS
Trigger: GGACACAGTGACACTTCGCCAGGAGCATGAGGACTC...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGATCCTCCGCAGGCCGATaGTCTGAACCCACTCCATGG +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRSSAGR*SEPTPW
Trigger: CCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGA...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGACCCTGCTTCTCCTCCTaGACAGTGGGTGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRPCFSS*TVGAAL
Trigger: GAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGG...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CAA 72 bp GTGAGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTaGCCTCGCGGCTGTGCAGACGAACACATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VSGGPSCANGTV*PRGCADEHIWS
Trigger: CGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGAGGTGTCGGGCACATTaGGGATTGTTCCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQRCRAH*GLFLRT
Trigger: AGTTCTCAGGAACAATCCTCAATGTGCCCGACACCT...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGAGGTGTCGGGCACATTaGGGATTGTTCCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGRCRAH*GLFLRT
Trigger: AGTTCTCAGGAACAATCCTCAATGTGCCCGACACCT...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR GCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTCCTCCATCTCACTGTaGCGTTCTCGCTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVSSISL*RSRFDF
Trigger: AAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGA...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CGTGTGCTGGCCTGTGGCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCCTGCATATTAGTCTCTaGATAAGGTCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVLACGSCRHTGSQRTATLHISL*IRSFAS
Trigger: AGAAGCAAAAGACCTTATCCAGAGACTAATATGCAG...GGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGCCACAGGCCAGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAATTGATGCTGAACTGGTaGGCTTTGGGCTTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQLMLNW*ALGFGP
Trigger: TGGACCGAAGCCCAAAGCCCACCAGTTCAGCATCAA...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGACTTGATGCTGAACTaGTGGGCTTTGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADDLMLN*WALGFG
Trigger: ACCGAAGCCCAAAGCCCACCAGTTCAGCATCAAGTC...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGCGAGCGAGGGGTCAGTaGGATTTACCAGGTCGAGAG +
Preference number: 4 (lower is better)
Translates to: ACVRVKWMKRPPTTLCLLRARGQ*DLPGRE
Trigger: CTCTCGACCTGGTAAATCCCACTGACCCCTCGCTCG...CAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGTCTTTGTCAAAATCCTaGTCGGGGTCGGACATGCTC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGSLSKS*SGSDML
Trigger: GAGCATGTCCGACCCCGACCAGGATTTTGACAAAGA...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACCTTCAGAGACATCGGTaGCATGGGATGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADLQRHR*HGMGTE
Trigger: TTCAGTTCCCATCCCATGTCACCGATGTCTCTGAAG...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp GTAGGGTTGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCCAGCCGTGGCTACAGACACTaGTGGGGACAAGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: VGLRHLQERGKVLRPYPSRGYRH*WGQVHL
Trigger: AAGATGGACTTGTCCCCATCAGTGTCTGTAGCCACG...GCTGGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp TCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCCCTTCACGGTGCCTATaGCCTCCTCCATCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SAAACVRVKWMKRPPTTLPSRCL*PPPSHC
Trigger: ACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGG...GAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCATCACTGAACTTCCTGTaGAAAGGCTTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPSLNFL*KGLVLW
Trigger: CCAGAGAACTAAGCCTTTCCACAGGAAGTTCAGTGA...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGTTGGATATCATTTTaGATCGCAGTTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGGWISF*IAVRGL
Trigger: GAGACCCCGAACTGCGATCCAAAATGATATCCAACC...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CCA 90 bp TCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTCTCGGCGTGTAGCATaGATAACATCTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SAAACVRVKWMKRPPTTLSRRVA*ITSEAR
Trigger: CCTGGCCTCAGATGTTATCCATGCTACACGCCGAGA...GAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
3UTR CAA 72 bp GTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTaGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VALGWRTLVFVG*RHLQERGKVLR
Trigger: CCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp TCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTCGAAGTCTTCTCGATaGAGCTGCATGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: SAAACVRVKWMKRPPTTLSKSSR*SCMSFT
Trigger: CGTGAAGGACATGCAGCTTCATCGAGAAGACTTCGA...GAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR TCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAAGCTATTGGATGGAGTTaGGTGTTTGGTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQAIGWS*VFGGIR
Trigger: TCTGATTCCACCAAACACTCAACTCCATCCAATAGC...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCAAAAAGTCAGATCATGTaGAAGAGGAGCAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPKSQIM*KRSSVE
Trigger: TTCAACACTGCTCCTCTTGCACATGATCTGACTTTT...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGACAACTGACTCCTTCTTaGATGCCAGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRQLTPS*MPDPAA
Trigger: AGCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTG...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGGGTTCTTATGCAAGATaGCCTGCAGCCCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGGSYAR*PAALQG
Trigger: TCCTTGAAGGGCTGCAGGCCATCTTGCATAAGAACC...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCGTGGTTGAAGTTGGTTaGGTTGGATATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVVVEVG*VGYHFG
Trigger: TCCAAAATGATATCCAACCCAACCAACTTCAACCAC...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTCTTTGTCAAAATCCTaGTCGGGGTCGGACATGCTC +
Preference number: 4 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGSLSKS*SGSDML
Trigger: GAGCATGTCCGACCCCGACCAGGATTTTGACAAAGA...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAGTTGAGTGTTTGGTaGAATCAGAGTCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SGGPSCANGTVLPRGCADELSVW*NQSQAL
Trigger: AAGAGCCTGACTCTGATTCCACCAAACACTCAACTC...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCACAGACCTTCAAAGAATaGGTGTTTCTTAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPQTFKE*VFLKVF
Trigger: GAAGACTTTAAGAAACACGCATTCTTTGAAGGTCTG...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAATCAACCAATTGCTTGTaGAATTCTTCCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQSTNCL*NSSFSC
Trigger: GCAGGAGAAGGAAGAATTGCACAAGCAATTGGTTGA...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGTGGTTGAAGTTGGTTaGGTTGGATATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGVVEVG*VGYHFG
Trigger: TCCAAAATGATATCCAACCCAACCAACTTCAACCAC...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR TCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGAGCGTTCGAGCCTGTTTaGATCTGCCATTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRAFEPV*ICHFTL
Trigger: AAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGC...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp GTAGGGTTGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCCAGCCTGGATAAGGTCTTTTaGTTCTTCAGAGACATCGGT +
Preference number: 4 (lower is better)
Translates to: VGLRHLQERGKVLRPYPSLDKVF*FFRDIG
Trigger: ACCGATGTCTCTGAAGAAGCAAAAGACCTTATCCAG...GCTGGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGTTAAGTTCTTTGGTCTaGGATTTCAATCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVLSSLV*DFNRSE
Trigger: TTCAGAGCGATTGAAATCCCAGACCAAAGAACTTAA...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGAATGGAGTTGAGTGTTTaGTGGAATCAGAGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRMELSV*WNQSQA
Trigger: AGCCTGACTCTGATTCCACCAAACACTCAACTCCAT...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp GCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTGCCTTCTGAGAATCCTGGAAATCTaGAAGTTTGAGCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: ACVRVKWMKRPPTTLCLLRILEI*KFEPCI
Trigger: GATACAGGGCTCAAACTTCCAGATTTCCAGGATTCT...CAGAAGGCAGAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR GCA 90 bp TCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCCTCTTCCTCAGACTTTaGATTTCTTCTAACAATTCC +
Preference number: 4 (lower is better)
Translates to: SAAACVRVKWMKRPPTTLLFLRL*ISSNNS
Trigger: GGAATTGTTAGAAGAAATGCAAAGTCTGAGGAAGAG...GAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGATCAAAGATAGAATCCTaGAAATCTGGAAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRSKIES*KSGSLS
Trigger: GCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGA...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp AGCCGCACAGTCCTTGTCGTCGCAGCCCGGCCTAGGCCGACATCTTaGGCTCCGTCCCGGCGGCACCGAGTCTGGGGCACCGGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SRTVLVVAARPRPTS*APSRRHRVWGTGPR
Trigger: GCGGGGCCCGGTGCCCCAGACTCGGTGCCGCCGGGACGGAGCCCAAGATGTCGGCCTAGGCCGGGCTGCGACGACAAGGACTGTGCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS GCA 90 bp CTCCTGGATGGCGGCTGCCGGGGGAGGCCTGCTGGGGTAGGGCCCTaGTTCTCCTCCTGGACAGTGGGTGCAGCACTCAGAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LLDGGCRGRPAGVGP*FSSWTVGAALRGRS
Trigger: GGACCTGCCTCTGAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGGCAGCCGCCATCCAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 90 bp ACTGGTGGGCTTTGGGCTTCGGTCCAGCCATGGCGAGGGCCTGCGTaGTGGGCAGTGGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: TGGLWASVQPWRGPA*WAVAQETASAVAEP
Trigger: TGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCATGGCTGGACCGAAGCCCAAAGCCCACCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp GGCTGCCGGGGGAGGCCTGCTGGGGTAGGGCCCTGCTTCTCCTCCTaGACAGTGGGTGCAGCACTCAGAGGCAGGTCCATGAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: GCRGRPAGVGPCFSS*TVGAALRGRSMSTC
Trigger: GCAGGTGCTCATGGACCTGCCTCTGAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 90 bp ACGCTCAGGGCGCTATCGTTGCGCCACGGCCCGTCCAGGAGCAGCTaGTCCAGCTTCTTGAGCCGCACAGTCCTTGTCGTCGCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: TLRALSLRHGPSRSS*SSFLSRTVLVVAAR
Trigger: CCGGGCTGCGACGACAAGGACTGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCGCAACGATAGCGCCCTGAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS CCA 90 bp GGTGGGCTTTGGGCTTCGGTCCAGCCATGGCGAGGGCCTGCGTGCTaGGCAGTGGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCATAT +
Preference number: 5 (lower is better)
Translates to: GGLWASVQPWRGPAC*AVAQETASAVAEPY
Trigger: ATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCATGGCTGGACCGAAGCCCAAAGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp TTTGGGCTTCGGTCCAGCCATGGCGAGGGCCTGCGTGCTGGGCAGTaGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCATATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: FGLRSSHGEGLRAGQ*HRRRPLLWPSHILL
Trigger: CAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCATGGCTGGACCGAAGCCCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp GGACATGCTCCTCAGAGGCACAGGCACTCCAGGCTCGGACCCACCTaGCGACGGCCACGAGACATAGGGCTTGCTCCTGGATGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GHAPQRHRHSRLGPT*RRPRDIGLAPGWRL
Trigger: CAGCCGCCATCCAGGAGCAAGCCCTATGTCTCGTGGCCGTCGTCAGGTGGGTCCGAGCCTGGAGTGCCTGTGCCTCTGAGGAGCATGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CCA 90 bp GAGGGCCTGCGTGCTGGGCAGTGGCACAGGAGACGGCCTCTGCTGTaGCCGAGCCATATCCTCCTGCTGCTCTGTGCTCGTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: EGLRAGQWHRRRPLL*PSHILLLLCARGYR
Trigger: TCTGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GCAGCTGCAGGCACACTGGGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGAGCTGCTCCAGCTTCTaGAGCCGCACCTTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: AAAGTLGASAQLPSQQEGSCSSF*SRTLAD
Trigger: GTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGCT...CCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCCCAGTGTGCCTGCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCACTCAGGGCGCTATCGTaGCGCCACGGCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPLRALS*RHGPSR
Trigger: CCTGGACGGGCCGTGGCGCAACGATAGCGCCCTGAG...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGCTGAACTGGTGGGCTTaGGGCTTCGGTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SSALALMLGPFGLPGPTVLNWWA*GFGPAM
Trigger: CATGGCTGGACCGAAGCCCAAAGCCCACCAGTTCAG...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp CATGGGTGGGGCTGCAACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCATGCGTGACCTCCGACCTTGAGGGTCCACGTACA +
Preference number: 5 (lower is better)
Translates to: HGWGCNYRRQEPQAT*APACVTSDLEGPRT
Trigger: TGTACGTGGACCCTCAAGGTCGGAGGTCACGCATGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCCCCACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp CGGTACTGCTTCTCGAGGCCCTTCAGCCGGTGTGTGGAGTCCTCATaGTCCTGGCGAAGTGTCACTGTGTCCTCCAGCTGGCGTTCGAGC +
Preference number: 5 (lower is better)
Translates to: RYCFSRPFSRCVESS*SWRSVTVSSSWRSS
Trigger: GCTCGAACGCCAGCTGGAGGACACAGTGACACTTCGCCAGGAGCATGAGGACTCCACACACCGGCTGAAGGGCCTCGAGAAGCAGTACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCCTGGACTTCTCAGACTaGCGGAGGTCCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCLDFSD*RRSCRM
Trigger: CATGCGGCAGGACCTCCGCAAGTCTGAGAAGTCCAG...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCGCCAGGCTGCTGTCTTaGACCTTCCTCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCARLLS*TFLSSS
Trigger: GGAGGAGCTGAGGAAGGTCAAAGACAGCAGCCTGGC...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp GGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCATATCCTCCTGCTaGTCTGTGCTCGTGGCTACAGACACTGATGGGGACAAGTCCATC +
Preference number: 5 (lower is better)
Translates to: GTGDGLCCGRAISSC*SVLVATDTDGDKSI
Trigger: GATGGACTTGTCCCCATCAGTGTCTGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp AGTGGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCATATCCTCCTaGTGCTCTGTGCTCGTGGCTACAGACACTGATGGGGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: SGTGDGLCCGRAISS*CSVLVATDTDGDKS
Trigger: GGACTTGTCCCCATCAGTGTCTGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACATCTAGAAGGACGTaGTCGGGCTTGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VVSSALALMLGPFGLPGPTSRRT*SGLMSL
Trigger: CAGAGACATCAAGCCCGACAACGTCCTTCTAGATGT...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp ATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCTGCTGATGTGCAGGAGCACTCGGGCCCGTATTaGCCCATGCCATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: MRFNTRGTPGPGAADVQEHSGPY*PMPSSM
Trigger: CATGGAGGATGGCATGGGCAAATACGGGCCCGAGTG...CTCCTGCACATCAGCAGCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GGAGCCAGCGCACAGCTACCTTCACAGCAGGAGGGGCATCTCATGGCTGTGGCCGCAACTGACTCCTTCTaGGATGCCAGATCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GASAQLPSQQEGHLMAVAATDSF*DARSCS
Trigger: GCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTGC...GGCCACAGCCATGAGATGCCCCTCCTGCTGTGAAGGTAGCTGTGCGCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCACGGTGGGGACAAGTCCATCTTaGAAGCCTGTGTTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SSALALMLGPFGLPGPTVGTSPS*KPVFPG
Trigger: ACCAGGAAACACAGGCTTCAAAGATGGACTTGTCCC...CACCGTGGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp TCAACAGAGAGAACCCAGAGGGGTAGCCAACACAGAGCCTGTCCTTaGACACGGCCATCCACTGCACGTGTCCCGGAGCCACCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: STERTQRGSQHRACP*TRPSTARVPEPPAH
Trigger: GTGAGCTGGTGGCTCCGGGACACGTGCAGTGGATGGCCGTGTTCAAGGACAGGCTCTGTGTTGGCTACCCCTCTGGGTTCTCTCTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS GCA 90 bp CAGGACGGCCTTGATGAGCGGCAGCGAGCTGTCGTAGGCCTCCTGTaGGACGTGCACTACCTGGCTCTTCAGCCGGTTCTTATGCAAGAT +
Preference number: 5 (lower is better)
Translates to: QDGLDERQRAVVGLL*DVHYLALQPVLMQD
Trigger: ATCTTGCATAAGAACCGGCTGAAGAGCCAGGTAGTGCACGTCGCACAGGAGGCCTACGACAGCTCGCTGCCGCTCATCAAGGCCGTCCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp TGCTTCTCGAGGCCCTTCAGCCGGTGTGTGGAGTCCTCATGCTCCTaGCGAAGTGTCACTGTGTCCTCCAGCTGGCGTTCGAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CFSRPFSRCVESSCS*RSVTVSSSWRSSLF
Trigger: AAACAGGCTCGAACGCCAGCTGGAGGACACAGTGACACTTCGCCAGGAGCATGAGGACTCCACACACCGGCTGAAGGGCCTCGAGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp ACCAGGGGTAGAGGTGCACATGGTGGTTCCGGCCACACAGGAGGATaGCGATCTTCTCCTTGGGCGCCAGCTCGATCTGGTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: TRGRGAHGGSGHTGG*RSSPWAPARSGTPS
Trigger: AGAAGGTGTACCAGATCGAGCTGGCGCCCAAGGAGAAGATCGCCATCCTCCTGTGTGGCCGGAACCACCATGTGCACCTCTACCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS-3UTR CAA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCGCCTCAACCAATTGCTaGTGCAATTCTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VVSSALALMLGPFGLPGPASTNC*CNSSFS
Trigger: GGAGAAGGAAGAATTGCACAAGCAATTGGTTGAGGC...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTCACAGCCCAGCAGGTaGAGGCTGCCATCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVSQPSR*RLPSEF
Trigger: GAACTCTGATGGCAGCCTCAACCTGCTGGGCTGTGA...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp TACGGTGTCTTCGCTGTTCCAGTTCTCCACCAGCTGGCCCTGGGGTaGCAGGTACGAAGTGCTCTCCCCACATCAGAGGCACTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: YGVFAVPVLHQLALG*QVRSALPTSEALSP
Trigger: TGGAGACAGTGCCTCTGATGTGGGGAGAGCACTTCGTACCTGTCACCCCAGGGCCAGCTGGTGGAGAACTGGAACAGCGAAGACACCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS GCA 90 bp GTCTGGGTGGATTCTTGCAGCTTCCGGCTGAGCTCCAGCTTCTCCTaGTCCAGCCTCCGTATCCTTCGCTCGTACGCTTCGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: VWVDSCSFRLSSSFS*SSLRILRSYASICK
Trigger: CTTGCAGATCGAAGCGTACGAGCGAAGGATACGGAGGCTGGAGCAGGAGAAGCTGGAGCTCAGCCGGAAGCTGCAAGAATCCACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp CGGCCTCCTTGCTTTACCTTGAGGGCCTCGAGCTCGCGCTCCATCTaGTTACAGAAGCTCTCGCTGTGTTCTCGGAGCTTCCGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RPPCFTLRASSSRSI*LQKLSLCSRSFRSL
Trigger: TAAGGAGCGGAAGCTCCGAGAACACAGCGAGAGCTTCTGTAAGCAGATGGAGCGCGAGCTCGAGGCCCTCAAGGTAAAGCAAGGAGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp GCCTCCTGTGCGACGTGCACTACCTGGCTCTTCAGCCGGTTCTTATaGAAGATGGCCTGCAGCCCTTCAAGGATCCCTACCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: ASCATCTTWLFSRFL*KMACSPSRIPTHFL
Trigger: GAGGAAGTGGGTAGGGATCCTTGAAGGGCTGCAGGCCATCTTGCATAAGAACCGGCTGAAGAGCCAGGTAGTGCACGTCGCACAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp ACGCCAAGAGGCCTCTTGGACTGCTCAGGAGGTATGGGGCACACCTaGGGAGCGCTGTCTTTGCAGGACACATGGCAGGAAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: TPRGLLDCSGGMGHT*GALSLQDTWQENAQ
Trigger: CTGTGCATTTTCCTGCCATGTGTCCTGCAAAGACAGCGCTCCCCAGGTGTGCCCCATACCTCCTGAGCAGTCCAAGAGGCCTCTTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp CCTCTCATCTGTACGGTGTCTTCGCTGTTCCAGTTCTCCACCAGCTaGCCCTGGGGTGACAGGTACGAAGTGCTCTCCCCACATCAGAGG +
Preference number: 5 (lower is better)
Translates to: PLICTVSSLFQFSTS*PWGDRYEVLSPHQR
Trigger: CCTCTGATGTGGGGAGAGCACTTCGTACCTGTCACCCCAGGGCCAGCTGGTGGAGAACTGGAACAGCGAAGACACCGTACAGATGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGAACTCCGCCACATACTaGTCGCGGCGCAGCGCCGAG +
Preference number: 5 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGNSATY*SRRSAE
Trigger: CTCGGCGCTGCGCCGCGACAAGTATGTGGCGGAGTT...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCCATGTCTTCCGGAAGCTaGTCTTCAAACTTACTCAGC +
Preference number: 5 (lower is better)
Translates to: VVSSALALMLGPFGLPGPMSSGS*SSNLLS
Trigger: GCTGAGTAAGTTTGAAGACAAGCTTCCGGAAGACAT...GGGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCAGTCTGGGTGGATTCTaGCAGCTTCCGGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: NGTVLPRGCADEHIWSIASLGGF*QLPAEL
Trigger: GAGCTCAGCCGGAAGCTGCAAGAATCCACCCAGACT...GGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGATGGCCCCCGGCCTCCTaGCTTTACCTTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PLPSVALGWRTLVFVGLRWPPAS*LYLEGL
Trigger: GAGGCCCTCAAGGTAAAGCAAGGAGGCCGGGGGCCA...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCACCAAATGGCGATCTTCTCCTaGGGCGCCAGCTCGATCTGG +
Preference number: 5 (lower is better)
Translates to: NSVASRLCRRTHLVDRHQMAIFS*GASSIW
Trigger: CCAGATCGAGCTGGCGCCCAAGGAGAAGATCGCCAT...TTGGTGGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGACACAGAGCCTGTCCTaGAACACGGCCATCCACTGC +
Preference number: 5 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQTQSLS*NTAIHC
Trigger: GCAGTGGATGGCCGTGTTCAAGGACAGGCTCTGTGT...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp CTGCCATCAGAGTTCAGAGGTCTTATCCTCCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGCACGTCGAAGACATCCACCCCGTAT +
Preference number: 5 (lower is better)
Translates to: LPSEFRGLILRRPMV*THSMVRTSKTSTPY
Trigger: ATACGGGGTGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGATAAGACCTCTGAACTCTGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp GAGACGGCCTCTGCTGTGGCCGAGCCATATCCTCCTGCTGCTCTGTaGTCGTGGCTACAGACACTGATGGGGACAAGTCCATCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: ETASAVAEPYPPAAL*SWLQTLMGTSPSLK
Trigger: CTTCAAAGATGGACTTGTCCCCATCAGTGTCTGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp CGGGCTGGGTCGACTTCCCTTCTGGCAGGTCGTACAGGAAGAGTTTaGAGTCACAGACCACGGCGTAAGCCCTCTGCCATCCTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RAGSTSLLAGRTGRV*SHRPRRKPSAILSS
Trigger: TGAAGAAAGGATGGCAGAGGGCTTACGCCGTGGTCTGTGACTGCAAACTCTTCCTGTACGACCTGCCAGAAGGGAAGTCGACCCAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp GCCTCTGCTGTGGCCGAGCCATATCCTCCTGCTGCTCTGTGCTCGTaGCTACAGACACTGATGGGGACAAGTCCATCTTTGAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ASAVAEPYPPAALCS*LQTLMGTSPSLKPV
Trigger: CACAGGCTTCAAAGATGGACTTGTCCCCATCAGTGTCTGTAGCCACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp AGGCAGGTGGACGAGCTCTTCCTCAGCGTCCCTGTCGCTATGAGCTaGCAGCCCTTTGTTTCCGGGAGCTTGATGTCAAAGTTGCTCGCT +
Preference number: 5 (lower is better)
Translates to: RQVDELFLSVPVAMS*QPFVSGSLMSKLLA
Trigger: AGCGAGCAACTTTGACATCAAGCTCCCGGAAACAAAGGGCTGCCAGCTCATAGCGACAGGGACGCTGAGGAAGAGCTCGTCCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CCA 90 bp TCAGAGGTCTTATCCTCCGCAGGCCGATGGTCTGAACCCACTCCATaGTGCGCACGTCGAAGACATCCACCCCGTATTCGCTGTACACTG +
Preference number: 5 (lower is better)
Translates to: SEVLSSAGRWSEPTP*CARRRHPPRIRCTL
Trigger: CAGTGTACAGCGAATACGGGGTGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGATAAGACCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCACTTAGAAGCAAGGGCTaGAAGGTAGCCTCTGGCATC +
Preference number: 5 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPLRSKG*KVASGI
Trigger: GATGCCAGAGGCTACCTTCAAGCCCTTGCTTCTAAG...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACACGCCAAGAGGCCTCTaGGACTGCTCAGGAGGTATG +
Preference number: 5 (lower is better)
Translates to: SGGPSCANGTVLPRGCADTPRGL*DCSGGM
Trigger: CATACCTCCTGAGCAGTCCAAGAGGCCTCTTGGCGT...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGATCTGCTTCTTGCTGTaGTCCGAGGTGTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGICFLL*SEVSGT
Trigger: TGTGCCCGACACCTCGGACAACAGCAAGAAGCAGAT...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGCTCAGCATCTGCTTCTaGCTGTTGTCCGAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVLSICF*LLSEVS
Trigger: CGACACCTCGGACAACAGCAAGAAGCAGATGCTGAG...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGCTCAGCATCTGCTTCTaGCTGTTGTCCGAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGLSICF*LLSEVS
Trigger: CGACACCTCGGACAACAGCAAGAAGCAGATGCTGAG...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTCAGAGTCAGGCTCTTaGTCAAAATCCTGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVSESGS*SKSWSG
Trigger: CCCCGACCAGGATTTTGACAAAGAGCCTGACTCTGA...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp GACCCACTGAATGATCTCTGCGATCTGCGCCTCCCAGTGCGCAACTaGCTCCTTCTTGGATGCCAGATCCTGCAGCTCATCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DPLNDLCDLRLPVRN*LLLGCQILQLIFQL
Trigger: CAGCTGGAAGATGAGCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTGCGCACTGGGAGGCGCAGATCGCAGAGATCATTCAGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp CATCGAACAGCATGGCCCTCTCCCGTTCGTACTTGTCCTTCACGGTaGCTATGGCCTCCTCCATCTCACTGTGCCGTTCTCGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: HRTAWPSPVRTCPSR*LWPPPSHCAVLALT
Trigger: AGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGAACGGGAGAGGGCCATGCTGTTCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp GCAGCCCTTTGTTTCCGGGAGCTTGATGTCAAAGTTGCTCGCTTCTaGTCCGTCGAAGGAGGACCAGGGGTAGAGGTGCACATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: AALCFRELDVKVARF*SVEGGPGVEVHMVV
Trigger: AACCACCATGTGCACCTCTACCCCTGGTCCTCCTTCGACGGAGCAGAAGCGAGCAACTTTGACATCAAGCTCCCGGAAACAAAGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS-3UTR CAA 90 bp AGTCGTCAGCTCAGCCTTGGCACTGATGCTGGGGCCATTCGGGCTCCCTGGCCCTCAGTGTTCTTCATTTaGACAACAGCAACCTCACCA +
Preference number: 5 (lower is better)
Translates to: SRQLSLGTDAGAIRAPWPSVFFI*TTATSP
Trigger: TGGTGAGGTTGCTGTTGTCAAAATGAAGAACACTGA...GGGCCAGGGAGCCCGAATGGCCCCAGCATCAGTGCCAAGGCTGAGCTGACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CAGGACACAGGAAGGGATGAGGTTCAACACTCGTGGCACTCCCGGGCCTGGTGCGGCGTTCGAGCCTGTTaGAATCTGCCATTTTACTCT +
Preference number: 5 (lower is better)
Translates to: QDTGRDEVQHSWHSRAWCGVRAC*NLPFYS
Trigger: AGAGTAAAATGGCAGATTCAAACAGGCTCGAACGCC...GCACCAGGCCCGGGAGTGCCACGAGTGTTGAACCTCATCCCTTCCTGTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GTAGGGTTGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCCAGCGGGCTAGGGAAGGACTaGATGCTGAACTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VGLRHLQERGKVLRPYPSGLGKD*MLNWWA
Trigger: AGCCCACCAGTTCAGCATCAAGTCCTTCCCTAGCCC...GCTGGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AGTGGTGGTCCTTCATGTGCAAACGGAACAGTGTTGCCTCGCGGCTGTGCAGACTCGTACAGGAAGAGTTaGCAGTCACAGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: SGGPSCANGTVLPRGCADSYRKS*QSQTTA
Trigger: CGCCGTGGTCTGTGACTGCAAACTCTTCCTGTACGA...GTCTGCACAGCCGCGAGGCAACACTGTTCCGTTTGCACATGAAGGACCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGAGGTACTCCTCACTTTaGAGCTCCACAGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQRYSSL*SSTAQR
Trigger: CCTCTGTGCTGTGGAGCTCAAAAGTGAGGAGTACCT...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGAGGTGTCGGGCACATaGAGGATTGTTCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGEVSGT*RIVPEN
Trigger: GTTCTCAGGAACAATCCTCAATGTGCCCGACACCTC...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp GGACAGGACATGTCTGCTGCCACAGTTAATCGCCAGCCTTCACGGGCAGGGCCAGATGGAGTTGAGTGTTaGGTGGAATCAGAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GQDMSAATVNRQPSRAGPDGVEC*VESESG
Trigger: GCCTGACTCTGATTCCACCAAACACTCAACTCCATC...TGGCCCTGCCCGTGAAGGCTGGCGATTAACTGTGGCAGCAGACATGTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp GCGTTCAAGCTCTTCATTCAGCCTCTTGATTTCCTTGTCGCGGTTTaGGTTGCCCAGGGCCCGTGTGGAACCGTGAAGGGACTGCACAGT +
Preference number: 5 (lower is better)
Translates to: AFKLFIQPLDFLVAV*VAQGPCGTVKGLHS
Trigger: ACTGTGCAGTCCCTTCACGGTTCCACACGGGCCCTGGGCAACTCAAACCGCGACAAGGAAATCAAGAGGCTGAATGAAGAGCTTGAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp AGTTGGTTGGGTTGGATATCATTTTGGATCGCAGTTCGGGGTCTCTaGGCATCTCTCGCCGCTGCTGTAGCCGCTCTTCCTCGGGAACCT +
Preference number: 5 (lower is better)
Translates to: SWLGWISFWIAVRGL*ASLAAAVAALPREP
Trigger: AGGTTCCCGAGGAAGAGCGGCTACAGCAGCGGCGAGAGATGCTCAGAGACCCCGAACTGCGATCCAAAATGATATCCAACCCAACCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 90 bp TACTCCTCACTTTTGAGCTCCACAGCACAGAGGGCATCGAAAGACTaGTGTGAGAGGAACGCGAGCGAGGGGTCAGTGGGATTTACCAGG +
Preference number: 5 (lower is better)
Translates to: YSSLLSSTAQRASKD*CERNASEGSVGFTR
Trigger: CCTGGTAAATCCCACTGACCCCTCGCTCGCGTTCCTCTCACAGCAGTCTTTCGATGCCCTCTGTGCTGTGGAGCTCAAAAGTGAGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CCA 90 bp ACTGTCTCCACTCTGCAGGCCCTGTGTGGCCATAGACTTCTGTGCTaGGGAACACATACCTCTTTGTCAAAATCCTGGTCGGGGTCGGAC +
Preference number: 5 (lower is better)
Translates to: TVSTLQALCGHRLLC*GTHTSLSKSWSGSD
Trigger: GTCCGACCCCGACCAGGATTTTGACAAAGAGGTATGTGTTCCCCAGCACAGAAGTCTATGGCCACACAGGGCCTGCAGAGTGGAGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp TGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGGGGGTTGGATATCATTTaGGATCGCAGTTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: WVGCMHGDPTTLITLLWGGLDII*DRSSGS
Trigger: AGACCCCGAACTGCGATCCAAAATGATATCCAACCC...CCCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCA
56% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS-3UTR CAA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCCTAGGGTTGGAGCTATaGGATGGAGTTGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVLGLEL*DGVECL
Trigger: CAAACACTCAACTCCATCCAATAGCTCCAACCCTAG...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp TCAAGAGCAGACTGCAATTCCAGCCGTGCAGACATGTCCAGCTTCTaGCTCCGACGAACTTTCCAGAGTGGATCCAGTGTCCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: SRADCNSSRADMSSF*LRRTFQSGSSVLDP
Trigger: GGGATCCAGGACACTGGATCCACTCTGGAAAGTTCGTCGGAGTCAGAAGCTGGACATGTCTGCACGGCTGGAATTGCAGTCTGCTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp TTCTCCTGCTCCAGCCTCCGTATCCTTCGCTCGTACGCTTCGATCTaGAAGCTGTTCTCCAAGTCCCGCTGCACATCTTCGTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FSCSSLRILRSYASI*KLFSKSRCTSSSLV
Trigger: AACCAAAGACGAAGATGTGCAGCGGGACTTGGAGAACAGCTTGCAGATCGAAGCGTACGAGCGAAGGATACGGAGGCTGGAGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp ACAGCATGGCCCTCTCCCGTTCGTACTTGTCCTTCACGGTGCCTATaGCCTCCTCCATCTCACTGTGCCGTTCTCGCTTTGACTTTTCTA +
Preference number: 5 (lower is better)
Translates to: TAWPSPVRTCPSRCL*PPPSHCAVLALTFL
Trigger: TAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGAACGGGAGAGGGCCATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp GTGCGACGTGCACTACCTGGCTCTTCAGCCGGTTCTTATGCAAGATaGCCTGCAGCCCTTCAAGGATCCCTACCCACTTCCTCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VRRALPGSSAGSYAR*PAALQGSLPTSSFH
Trigger: ATGAAAAGAGGAAGTGGGTAGGGATCCTTGAAGGGCTGCAGGCCATCTTGCATAAGAACCGGCTGAAGAGCCAGGTAGTGCACGTCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACGGAACAGTGTTGCCTCGCGGCTGTGCAGACGAACACATCTGGTCGATCGCCTGGAAATCTGGAAGTTaGAGCCCTGTATCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: NGTVLPRGCADEHIWSIAWKSGS*SPVSAL
Trigger: TAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCA...GGCGATCGACCAGATGTGTTCGTCTGCACAGCCGCGAGGCAACACTGTTCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGATCTGCTTCTTGCTGTaGTCCGAGGTGTCGGGCACA +
Preference number: 5 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGICFLL*SEVSGT
Trigger: TGTGCCCGACACCTCGGACAACAGCAAGAAGCAGAT...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp AAGGCTCCTCTCCCGATCACTTTGATGATCTCGAAGTCTTCTCGATaGAGCTGCATGTCCTTCACGAGCTGGGTGAAAGGCTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: KAPLPITLMISKSSR*SCMSFTSWVKGLAH
Trigger: GTGGGCCAAGCCTTTCACCCAGCTCGTGAAGGACATGCAGCTTCATCGAGAAGACTTCGAGATCATCAAAGTGATCGGGAGAGGAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS GCA 90 bp TGCGCCTCCCAGTGCGCAACTGACTCCTTCTTGGATGCCAGATCCTaGAGCTCATCTTCCAGCTGTCTGTTTTGGGCTGTTAGTTTATCC +
Preference number: 5 (lower is better)
Translates to: CASQCATDSFLDARS*SSSSSCLFWAVSLS
Trigger: GGATAAACTAACAGCCCAAAACAGACAGCTGGAAGATGAGCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTGCGCACTGGGAGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp ACGTGCACTACCTGGCTCTTCAGCCGGTTCTTATGCAAGATGGCCTaGAGCCCTTCAAGGATCCCTACCCACTTCCTCTTTTCATTCTCG +
Preference number: 5 (lower is better)
Translates to: TCTTWLFSRFLCKMA*SPSRIPTHFLFSFS
Trigger: CGAGAATGAAAAGAGGAAGTGGGTAGGGATCCTTGAAGGGCTGCAGGCCATCTTGCATAAGAACCGGCTGAAGAGCCAGGTAGTGCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp CCGTGCAGACATGTCCAGCTTCTGACTCCGACGAACTTTCCAGAGTaGATCCAGTGTCCTGGATCCCAAACTAGAACTTCGCAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PCRHVQLLTPTNFPE*IQCPGSQTRTSQGL
Trigger: GAGACCTTGCGAAGTTCTAGTTTGGGATCCAGGACACTGGATCCACTCTGGAAAGTTCGTCGGAGTCAGAAGCTGGACATGTCTGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTGCTGCCACAGTCTTCATTCAGCCTCTaGATTTCCTTGTCGCGGTTT +
Preference number: 5 (lower is better)
Translates to: NGEGRPVQDEDRTCLLPQSSFSL*ISLSRF
Trigger: AAACCGCGACAAGGAAATCAAGAGGCTGAATGAAGA...CTGTGGCAGCAGACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CCAAGCACGCCAACGGGGAAGGGAGGCCTGTCCAAGATGAGGACAGGACATGTCTCTGCTGTTAACTTCTaGTTCTCATCGAACAGCATG +
Preference number: 5 (lower is better)
Translates to: PSTPTGKGGLSKMRTGHVSAVNF*FSSNSM
Trigger: CATGCTGTTCGATGAGAACAAGAAGTTAACAGCAGA...GACATGTCCTGTCCTCATCTTGGACAGGCCTCCCTTCCCCGTTGGCGTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGTTGAGAGAGGTGTCGGGCACATaGAGGATTGTTCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: PLPSVALGWRTLVFVGLREVSGT*RIVPEN
Trigger: GTTCTCAGGAACAATCCTCAATGTGCCCGACACCTC...TCTCAACCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp GTAGGGTTGAGACATCTTCAGGAGAGAGGGAAGGTCTTGAGGCCATACCCCAGCGGGTTGGATATCATTTaGGATCGCAGTTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: VGLRHLQERGKVLRPYPSGLDII*DRSSGS
Trigger: AGACCCCGAACTGCGATCCAAAATGATATCCAACCC...GCTGGGGTATGGCCTCAAGACCTTCCCTCTCTCCTGAAGATGTCTCAACCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp TCCAAGTCCCGCTGCACATCTTCGTCTTTGGTTAGCGTGTTAGACTaGGTCATGCTCTTCAGAGAGCCCCGGTCAGAAAAGCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: SKSRCTSSSLVSVLD*VMLFREPRSEKQLS
Trigger: GGAAAGCTGCTTTTCTGACCGGGGCTCTCTGAAGAGCATGACTCAGTCTAACACGCTAACCAAAGACGAAGATGTGCAGCGGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp TCAGCATGTCGTCGTCCACATCGAAGTTGGACGTGTCCGAAGGGCTaGTCACATCGGGAATGTAGGGCGCTTCAAGGTTTCGTATATTCT +
Preference number: 5 (lower is better)
Translates to: SACRRPHRSWTCPKG*SHRECRALQGFVYS
Trigger: AGAATATACGAAACCTTGAAGCGCCCTACATTCCCGATGTGAGCAGCCCTTCGGACACGTCCAACTTCGATGTGGACGACGACATGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp CTGGGTGGGATGTATGCACGGGGACCCCACAACCTTGATCACACTGTTGTGGGGTTGAAGTTGGTTGGGTaGGATATCATTTTGGATCGC +
Preference number: 5 (lower is better)
Translates to: LGGMYARGPHNLDHTVVGLKLVG*DIILDR
Trigger: GCGATCCAAAATGATATCCAACCCAACCAACTTCAA...CCCCACAACAGTGTGATCAAGGTTGTGGGGTCCCCGTGCATACATCCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS CCA 90 bp GTAAGATTTCAATGTTTCTCAGCATGTCGTCGTCCACATCGAAGTTaGACGTGTCCGAAGGGCTGCTCACATCGGGAATGTAGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: VRFQCFSACRRPHRS*TCPKGCSHRECRAL
Trigger: AAGCGCCCTACATTCCCGATGTGAGCAGCCCTTCGGACACGTCCAACTTCGATGTGGACGACGACATGCTGAGAAACATTGAAATCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AGGGAAGGTCTTGAGGCCATACCCCAGCATCTGCTGAGGAAGCCGGTGGATGTGTTTGACTTTTCTAACTaGTCTTTCAGCATCAGGACC +
Preference number: 5 (lower is better)
Translates to: REGLEAIPQHLLRKPVDVFDFSN*SFSIRT
Trigger: GGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAA...CACATCCACCGGCTTCCTCAGCAGATGCTGGGGTATGGCCTCAAGACCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 90 bp CTGGCGAAGTGTCACTGTGTCCTCCAGCTGGCGTTCGAGCCTGTTTaGATCTGCCATTTTACTCTTCATGCGTTCAAGCTCTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: LAKCHCVLQLAFEPV*ICHFTLHAFKLFIQ
Trigger: CTGAATGAAGAGCTTGAACGCATGAAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGCCAGCTGGAGGACACAGTGACACTTCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp CGCTTTGACTTTTCTAACTTGTCTTTCAGCATCAGGACCTCTTTCTaGAGGGCCAACTGGTGGCTTTCGGAGTCGTGGACTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RFDFSNLSFSIRTSF*RANWWLSESWTSFF
Trigger: GAAGAAGGAAGTCCACGACTCCGAAAGCCACCAGTTGGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 90 bp TCGTACTTGTCCTTCACGGTGCCTATGGCCTCCTCCATCTCACTGTaGCGTTCTCGCTTTGACTTTTCTAACTTGTCTTTCAGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SYLSFTVPMASSISL*RSRFDFSNLSFSIR
Trigger: CCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp AACTACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGGAGCTATTGGATGGAGTaGAGTGTTTGGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: NYPLPSVALGWRTLVFVGSYWME*SVWWNQ
Trigger: CTGATTCCACCAAACACTCAACTCCATCCAATAGCT...CCCTACAAAGACTAAAGTGCGCCATCCCAGTGCCACAGAAGGCAGAGGGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp TCTAACTTGTCTTTCAGCATCAGGACCTCTTTCTGCAGGGCCAACTaGTGGCTTTCGGAGTCGTGGACTTCCTTCTTCACGTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: SNLSFSIRTSFCRAN*WLSESWTSFFTFFT
Trigger: AGTAAAGAACGTGAAGAAGGAAGTCCACGACTCCGAAAGCCACCAGTTGGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS-3UTR CAA 90 bp TCAGCAGCTGCCTGTGTCAGGGTTAAGTGGATGAAAAGGCCACCAACTACCCTCTTGAAGTTGGTTGGGTaGGATATCATTTTGGATCGC +
Preference number: 5 (lower is better)
Translates to: SAAACVRVKWMKRPPTTLLKLVG*DIILDR
Trigger: GCGATCCAAAATGATATCCAACCCAACCAACTTCAA...GAGGGTAGTTGGTGGCCTTTTCATCCACTTAACCCTGACACAGGCAGCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp ATTCCATTCTGCCCAAGTCGGCGCTCTCTGCTGCATATTAGTCTCTaGATAAGGTCTTTTGCTTCTTCAGAGACATCGGTGACATGGGAT +
Preference number: 5 (lower is better)
Translates to: IPFCPSRRSLLHISL*IRSFASSETSVTWD
Trigger: ATCCCATGTCACCGATGTCTCTGAAGAAGCAAAAGACCTTATCCAGAGACTAATATGCAGCAGAGAGCGCCGACTTGGGCAGAATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp ACAGACACTGATGGGGACAAGTCCATCTTTGAAGCCTGTGTTTCCTaGTCACTAGCTGAGCTGGTTCTAAAAGTCAGATCATGTGCAAGA +
Preference number: 5 (lower is better)
Translates to: TDTDGDKSIFEACVS*SLAELVLKVRSCAR
Trigger: TCTTGCACATGATCTGACTTTTAGAACCAGCTCAGCTAGTGACCAGGAAACACAGGCTTCAAAGATGGACTTGTCCCCATCAGTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp AAGAGGAGCAGTGTTGAAATACTCAAAGATAGAATCCTGGAAATCTaGAAGTTTGAGCCCTGTATCCGCTCTAAACTTCTCTTCCATCCT +
Preference number: 5 (lower is better)
Translates to: KRSSVEILKDRILEI*KFEPCIRSKLLFHP
Trigger: AGGATGGAAGAGAAGTTTAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACTGCTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 90 bp TCATGTGCAAGAGGAGCAGTGTTGAAATACTCAAAGATAGAATCCTaGAAATCTGGAAGTTTGAGCCCTGTATCCGCTCTAAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SCARGAVLKYSKIES*KSGSLSPVSALNFS
Trigger: AGAGAAGTTTAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACTGCTCCTCTTGCACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp GTCCTTGTCGTCGCAGCCCGGCCTAGGCCGACATCTTaGGCTCCGTCCCGGCGGCACCGAGTCTGGGGCACC +
Preference number: 6 (lower is better)
Translates to: VLVVAARPRPTS*APSRRHRVWGT
Trigger: GGTGCCCCAGACTCGGTGCCGCCGGGACGGAGCCCAAGATGTCGGCCTAGGCCGGGCTGCGACGACAAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS GCA 72 bp GGCGGCTGCCGGGGGAGGCCTGCTGGGGTAGGGCCCTaGTTCTCCTCCTGGACAGTGGGTGCAGCACTCAGA +
Preference number: 6 (lower is better)
Translates to: GGCRGRPAGVGP*FSSWTVGAALR
Trigger: TCTGAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGGCAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 72 bp CGGACCCACCTGACGACGGCCACGAGACATAGGGCTTaGTCCTGGATGGCGGCTGCCGGGGGAGGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RTHLTTATRHRA*SWMAAAGGGLL
Trigger: CAGCAGGCCTCCCCCGGCAGCCGCCATCCAGGAGCAAGCCCTATGTCTCGTGGCCGTCGTCAGGTGGGTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CCA 72 bp CGGTCCAGCCATGGCGAGGGCCTGCGTGCTGGGCAGTaGCACAGGAGACGGCCTCTGCTGTGGCCGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RSSHGEGLRAGQ*HRRRPLLWPSH
Trigger: ATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCATGGCTGGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp CTTGCTCCTGGATGGCGGCTGCCGGGGGAGGCCTGCTaGGGTAGGGCCCTGCTTCTCCTCCTGGACAGTGGG +
Preference number: 6 (lower is better)
Translates to: LAPGWRLPGEAC*GRALLLLLDSG
Trigger: CCCACTGTCCAGGAGGAGAAGCAGGGCCCTACCCCAGCAGGCCTCCCCCGGCAGCCGCCATCCAGGAGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 72 bp CGTCCAGCAGCGTCTCCACGCTCAGGGCGCTATCGTTaGGCCACGGCCCGTCCAGGAGCAGCTGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RPAASPRSGRYR*ATARPGAAAPA
Trigger: AGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCGCAACGATAGCGCCCTGAGCGTGGAGACGCTGCTGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS CAA 72 bp ACGTCCAGCAGCGTCTCCACGCTCAGGGCGCTATCGTaGCGCCACGGCCCGTCCAGGAGCAGCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSSSVSTLRALS*RHGPSRSSCSS
Trigger: GCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCGCAACGATAGCGCCCTGAGCGTGGAGACGCTGCTGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS CAA 72 bp CGCCACGGCCCGTCCAGGAGCAGCTGCTCCAGCTTCTaGAGCCGCACAGTCCTTGTCGTCGCAGCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: RHGPSRSSCSSF*SRTVLVVAARP
Trigger: AGGCCGGGCTGCGACGACAAGGACTGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS TCA 72 bp GCCACGGCCCGTCCAGGAGCAGCTGCTCCAGCTTCTTaGGCCGCACAGTCCTTGTCGTCGCAGCCCGGCCTA +
Preference number: 6 (lower is better)
Translates to: ATARPGAAAPAS*AAQSLSSQPGL
Trigger: TAGGCCGGGCTGCGACGACAAGGACTGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS GCA 72 bp CTTTGGGCTTCGGTCCAGCCATGGCGAGGGCCTGCGTaGTGGGCAGTGGCACAGGAGACGGCCTCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LWASVQPWRGPA*WAVAQETASAV
Trigger: CACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACGCAGGCCCTCGCCATGGCTGGACCGAAGCCCAAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp GACGCGGCCCCTGGCCCCCGGCCTCCTTGCTTTACCTaGAGGGCCTCGAGCTCGCGCTCCATCTGCTTACAG +
Preference number: 6 (lower is better)
Translates to: DAAPGPRPPCFT*RASSSRSICLQ
Trigger: CTGTAAGCAGATGGAGCGCGAGCTCGAGGCCCTCAAGGTAAAGCAAGGAGGCCGGGGGCCAGGGGCCGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp GGGAGGCCTGCTGGGGTAGGGCCCTGCTTCTCCTCCTaGACAGTGGGTGCAGCACTCAGAGGCAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: GRPAGVGPCFSS*TVGAALRGRSM
Trigger: CATGGACCTGCCTCTGAGTGCTGCACCCACTGTCCAGGAGGAGAAGCAGGGCCCTACCCCAGCAGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 72 bp CCGCCACATACTTGTCGCGGCGCAGCGCCGAGTGGCTaGACTCGGTGTAAAGGCACACCAGCACGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPHTCRGAAPSG*TRCKGTPARPA
Trigger: TGCTGGACGTGCTGGTGTGCCTTTACACCGAGTGCAGCCACTCGGCGCTGCGCCGCGACAAGTATGTGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS GCA 72 bp GCGCTATCGTTGCGCCACGGCCCGTCCAGGAGCAGCTaGTCCAGCTTCTTGAGCCGCACAGTCCTTGTCGTC +
Preference number: 6 (lower is better)
Translates to: ALSLRHGPSRSS*SSFLSRTVLVV
Trigger: GACGACAAGGACTGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCGCAACGATAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222196.2
CDS CCA 72 bp CGTGCTGGGCAGTGGCACAGGAGACGGCCTCTGCTGTaGCCGAGCCATATCCTCCTGCTGCTCTGTGCTCGT +
Preference number: 6 (lower is better)
Translates to: RAGQWHRRRPLL*PSHILLLLCAR
Trigger: ACGAGCACAGAGCAGCAGGAGGATATGGCTCGGCCACAGCAGAGGCCGTCTCCTGTGCCACTGCCCAGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp AAAGGCTTGGCCCACTCGAGGAACTCCGCCACATACTaGTCGCGGCGCAGCGCCGAGTGGCTGCACTCGGTG +
Preference number: 6 (lower is better)
Translates to: KGLAHSRNSATY*SRRSAEWLHSV
Trigger: CACCGAGTGCAGCCACTCGGCGCTGCGCCGCGACAAGTATGTGGCGGAGTTCCTCGAGTGGGCCAAGCCTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS TCA 72 bp GGCTGCAACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCATGCGTGACCTCCGACCTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: GCNYRRQEPQAT*APACVTSDLEG
Trigger: ACCCTCAAGGTCGGAGGTCACGCATGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp GACAGGAGCCGCAGGCCACATGAGCTCCTGCATGCGTaGCCTCCGACCTTGAGGGTCCACGTACAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: DRSRRPHELLHA*PPTLRVHVQSH
Trigger: ATGGGACTGTACGTGGACCCTCAAGGTCGGAGGTCACGCATGCAGGAGCTCATGTGGCCTGCGGCTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp AGGCCCTTCAGCCGGTGTGTGGAGTCCTCATGCTCCTaGCGAAGTGTCACTGTGTCCTCCAGCTGGCGTTCG +
Preference number: 6 (lower is better)
Translates to: RPFSRCVESSCS*RSVTVSSSWRS
Trigger: CGAACGCCAGCTGGAGGACACAGTGACACTTCGCCAGGAGCATGAGGACTCCACACACCGGCTGAAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp AGAACCCAGAGGGGTAGCCAACACAGAGCCTGTCCTTaGACACGGCCATCCACTGCACGTGTCCCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RTQRGSQHRACP*TRPSTARVPEP
Trigger: TGGCTCCGGGACACGTGCAGTGGATGGCCGTGTTCAAGGACAGGCTCTGTGTTGGCTACCCCTCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS GCA 72 bp TTCTCGAGGCCCTTCAGCCGGTGTGTGGAGTCCTCATaGTCCTGGCGAAGTGTCACTGTGTCCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: FSRPFSRCVESS*SWRSVTVSSSW
Trigger: CCAGCTGGAGGACACAGTGACACTTCGCCAGGAGCATGAGGACTCCACACACCGGCTGAAGGGCCTCGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp CTTGATGAGCGGCAGCGAGCTGTCGTAGGCCTCCTGTaGGACGTGCACTACCTGGCTCTTCAGCCGGTTCTT +
Preference number: 6 (lower is better)
Translates to: LDERQRAVVGLL*DVHYLALQPVL
Trigger: AAGAACCGGCTGAAGAGCCAGGTAGTGCACGTCGCACAGGAGGCCTACGACAGCTCGCTGCCGCTCATCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TCCTCCGCAGGCCGATGGTCTGAACCCACTCCATGGTaGGCACGTCGAAGACATCCACCCCGTATTCGCTGT +
Preference number: 6 (lower is better)
Translates to: SSAGRWSEPTPW*ARRRHPPRIRC
Trigger: ACAGCGAATACGGGGTGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TCTCCACCAGCTGGCCCTGGGGTGACAGGTACGAAGTaGTCTCCCCACATCAGAGGCACTGTCTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: SPPAGPGVTGTK*SPHIRGTVSTL
Trigger: CAGAGTGGAGACAGTGCCTCTGATGTGGGGAGAGCACTTCGTACCTGTCACCCCAGGGCCAGCTGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS GCA 72 bp TGCAGGCTCTGTGCTGAGGCCATTATATCCCAGGCGTaGAGCGCTACAGAGGGGCTAAGGGCTGCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: CRLCAEAIISQA*SATEGLRAALS
Trigger: TGAGAGGGCAGCCCTTAGCCCCTCTGTAGCGCTGCACGCCTGGGATATAATGGCCTCAGCACAGAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS CCA 72 bp GGCGGTACTGCTTCTCGAGGCCCTTCAGCCGGTGTGTaGAGTCCTCATGCTCCTGGCGAAGTGTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: GGTASRGPSAGV*SPHAPGEVSLC
Trigger: ACACAGTGACACTTCGCCAGGAGCATGAGGACTCCACACACCGGCTGAAGGGCCTCGAGAAGCAGTACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp GGCCTCTTGGACTGCTCAGGAGGTATGGGGCACACCTaGGGAGCGCTGTCTTTGCAGGACACATGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GLLDCSGGMGHT*GALSLQDTWQE
Trigger: TTCCTGCCATGTGTCCTGCAAAGACAGCGCTCCCCAGGTGTGCCCCATACCTCCTGAGCAGTCCAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp TTCTCCTTGGGCGCCAGCTCGATCTGGTACACCTTCTaGCAGTCAGCAGCGCGGACGATCACGTCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: FSLGASSIWYTF*QSAARTITSRV
Trigger: CACCCGAGACGTGATCGTCCGCGCTGCTGACTGCAAGAAGGTGTACCAGATCGAGCTGGCGCCCAAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS TCA 72 bp GCCATCCTTTCTTCACGCCTGTGGGCTTTGGGACCTTaGCGTAGCCCTTGTAGGCCGTGCCTATGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: AILSSRLWALGP*RSPCRPCLCPS
Trigger: AGAGGGGCATAGGCACGGCCTACAAGGGCTACGTCAAGGTCCCAAAGCCCACAGGCGTGAAGAAAGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp GATTCTTGCAGCTTCCGGCTGAGCTCCAGCTTCTCCTaGTCCAGCCTCCGTATCCTTCGCTCGTACGCTTCG +
Preference number: 6 (lower is better)
Translates to: DSCSFRLSSSFS*SSLRILRSYAS
Trigger: CGAAGCGTACGAGCGAAGGATACGGAGGCTGGAGCAGGAGAAGCTGGAGCTCAGCCGGAAGCTGCAAGAATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp AGTGCTCTCCCCACATCAGAGGCACTGTCTCCACTCTaGAGGCCCTGTGTGGCCATAGACTTCTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SALPTSEALSPL*RPCVAIDFCAG
Trigger: CCCAGCACAGAAGTCTATGGCCACACAGGGCCTGCAGAGTGGAGACAGTGCCTCTGATGTGGGGAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS CCA 72 bp AGGATGGCGATCTTCTCCTTGGGCGCCAGCTCGATCTaGTACACCTTCTTGCAGTCAGCAGCGCGGACGATC +
Preference number: 6 (lower is better)
Translates to: RMAIFSLGASSI*YTFLQSAARTI
Trigger: GATCGTCCGCGCTGCTGACTGCAAGAAGGTGTACCAGATCGAGCTGGCGCCCAAGGAGAAGATCGCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CCA 72 bp TTATCCTCCGCAGGCCGATGGTCTGAACCCACTCCATaGTGCGCACGTCGAAGACATCCACCCCGTATTCGC +
Preference number: 6 (lower is better)
Translates to: LSSAGRWSEPTP*CARRRHPPRIR
Trigger: GCGAATACGGGGTGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp TGTACGGTGTCTTCGCTGTTCCAGTTCTCCACCAGCTaGCCCTGGGGTGACAGGTACGAAGTGCTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: CTVSSLFQFSTS*PWGDRYEVLSP
Trigger: TGGGGAGAGCACTTCGTACCTGTCACCCCAGGGCCAGCTGGTGGAGAACTGGAACAGCGAAGACACCGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220657.2
CDS CAA 90 bp ATGGCGATCTTCTCCTTGGGCGCCAGCTCGATCTGGTACACCTTCTaGCAGTCAGCAGCGCGGACGATCACGTCTCGGGTGAGCTCAATG +
Preference number: 6 (lower is better)
Translates to: MAIFSLGASSIWYTF*QSAARTITSRVSSM
Trigger: CATTGAGCTCACCCGAGACGTGATCGTCCGCGCTGCTGACTGCAAGAAGGTGTACCAGATCGAGCTGGCGCCCAAGGAGAAGATCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CAA 90 bp AGCGTCCCTGTCGCTATGAGCTGGCAGCCCTTTGTTTCCGGGAGCTaGATGTCAAAGTTGCTCGCTTCTGCTCCGTCGAAGGAGGACCAG +
Preference number: 6 (lower is better)
Translates to: SVPVAMSWQPFVSGS*MSKLLASAPSKEDQ
Trigger: CTGGTCCTCCTTCGACGGAGCAGAAGCGAGCAACTTTGACATCAAGCTCCCGGAAACAAAGGGCTGCCAGCTCATAGCGACAGGGACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS TCA 72 bp CGTCGAAGACATCCACCCCGTATTCGCTGTACACTGTaGCATGGGTGGGGCTGCAACTACAGGCGACAGGAG +
Preference number: 6 (lower is better)
Translates to: RRRHPPRIRCTL*HGWGCNYRRQE
Trigger: CTCCTGTCGCCTGTAGTTGCAGCCCCACCCATGTCACAGTGTACAGCGAATACGGGGTGGATGTCTTCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp GAGTTCAGAGGTCTTATCCTCCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGCACGTCGAAGACATCC +
Preference number: 6 (lower is better)
Translates to: EFRGLILRRPMV*THSMVRTSKTS
Trigger: GGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGATAAGACCTCTGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp CTCGCCGCTGCTGTAGCCGCTCTTCCTCGGGAACCTTaGAGACAAAACGTCGTTTGCTCCGTGTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LAAAVAALPREP*RQNVVCSVSSA
Trigger: TGCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAAGGTTCCCGAGGAAGAGCGGCTACAGCAGCGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 72 bp GCCTCAACCAATTGCTTGTGCAATTCTTCCTTCTCCTaGCGGGCCAGGCGGTACTGCTTCTCGAGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: ASTNCLCNSSFS*RARRYCFSRPF
Trigger: GAAGGGCCTCGAGAAGCAGTACCGCCTGGCCCGGCAGGAGAAGGAAGAATTGCACAAGCAATTGGTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp CTTTTGAGCTCCACAGCACAGAGGGCATCGAAAGACTaGTGTGAGAGGAACGCGAGCGAGGGGTCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: LLSSTAQRASKD*CERNASEGSVG
Trigger: TCCCACTGACCCCTCGCTCGCGTTCCTCTCACAGCAGTCTTTCGATGCCCTCTGTGCTGTGGAGCTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CCA 72 bp TTTCCTTGTCGCGGTTTGAGTTGCCCAGGGCCCGTGTaGAACCGTGAAGGGACTGCACAGTCTGGGTGGATT +
Preference number: 6 (lower is better)
Translates to: FPCRGLSCPGPV*NREGTAQSGWI
Trigger: AATCCACCCAGACTGTGCAGTCCCTTCACGGTTCCACACGGGCCCTGGGCAACTCAAACCGCGACAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp CCCTCTCCCGTTCGTACTTGTCCTTCACGGTGCCTATaGCCTCCTCCATCTCACTGTGCCGTTCTCGCTTTG +
Preference number: 6 (lower is better)
Translates to: PSPVRTCPSRCL*PPPSHCAVLAL
Trigger: CAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGAACGGGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp AGCCCTCTGCCATCCTTTCTTCACGCCTGTGGGCTTTaGGACCTTGACGTAGCCCTTGTAGGCCGTGCCTAT +
Preference number: 6 (lower is better)
Translates to: SPLPSFLHACGL*DLDVALVGRAY
Trigger: ATAGGCACGGCCTACAAGGGCTACGTCAAGGTCCCAAAGCCCACAGGCGTGAAGAAAGGATGGCAGAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp ACTGGCAACGACACCGGGCTGGGTCGACTTCCCTTCTaGCAGGTCGTACAGGAAGAGTTTGCAGTCACAGAC +
Preference number: 6 (lower is better)
Translates to: TGNDTGLGRLPF*QVVQEEFAVTD
Trigger: GTCTGTGACTGCAAACTCTTCCTGTACGACCTGCCAGAAGGGAAGTCGACCCAGCCCGGTGTCGTTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp AAGACATCCACCCCGTATTCGCTGTACACTGTGACATaGGTGGGGCTGCAACTACAGGCGACAGGAGCCGCA +
Preference number: 6 (lower is better)
Translates to: KTSTPYSLYTVT*VGLQLQATGAA
Trigger: TGCGGCTCCTGTCGCCTGTAGTTGCAGCCCCACCCATGTCACAGTGTACAGCGAATACGGGGTGGATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp TGGCAGCCCTTTGTTTCCGGGAGCTTGATGTCAAAGTaGCTCGCTTCTGCTCCGTCGAAGGAGGACCAGGGG +
Preference number: 6 (lower is better)
Translates to: WQPFVSGSLMSK*LASAPSKEDQG
Trigger: CCCCTGGTCCTCCTTCGACGGAGCAGAAGCGAGCAACTTTGACATCAAGCTCCCGGAAACAAAGGGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CAA 72 bp TCTCGCCGCTGCTGTAGCCGCTCTTCCTCGGGAACCTaGAAGACAAAACGTCGTTTGCTCCGTGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SRRCCSRSSSGT*KTKRRLLRVLS
Trigger: GCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAAGGTTCCCGAGGAAGAGCGGCTACAGCAGCGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CAA 90 bp CTGAGCATCTCTCGCCGCTGCTGTAGCCGCTCTTCCTCGGGAACCTaGAAGACAAAACGTCGTTTGCTCCGTGTCCTCAGCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LSISRRCCSRSSSGT*KTKRRLLRVLSICF
Trigger: GAAGCAGATGCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAAGGTTCCCGAGGAAGAGCGGCTACAGCAGCGGCGAGAGATGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS TCA 72 bp CTTCTCGATGAAGCTGCATGTCCTTCACGAGCTGGGTaGAAGGCTTGGCCCACTCGAGGAACTCCGCCACAT +
Preference number: 6 (lower is better)
Translates to: LLDEAACPSRAG*KAWPTRGTPPH
Trigger: ATGTGGCGGAGTTCCTCGAGTGGGCCAAGCCTTTCACCCAGCTCGTGAAGGACATGCAGCTTCATCGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS TCA 72 bp CTCACAGCAAACTCCTCATCTCTGAGGTCCAAGACTTaGCTGGCAACGACACCGGGCTGGGTCGACTTCCCT +
Preference number: 6 (lower is better)
Translates to: LTANSSSLRSKT*LATTPGWVDFP
Trigger: AGGGAAGTCGACCCAGCCCGGTGTCGTTGCCAGTCAAGTCTTGGACCTCAGAGATGAGGAGTTTGCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp CGTCGTCCACATCGAAGTTGGACGTGTCCGAAGGGCTaGTCACATCGGGAATGTAGGGCGCTTCAAGGTTTC +
Preference number: 6 (lower is better)
Translates to: RRPHRSWTCPKG*SHRECRALQGF
Trigger: GAAACCTTGAAGCGCCCTACATTCCCGATGTGAGCAGCCCTTCGGACACGTCCAACTTCGATGTGGACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TCCAGCCTCCGTATCCTTCGCTCGTACGCTTCGATCTaGAAGCTGTTCTCCAAGTCCCGCTGCACATCTTCG +
Preference number: 6 (lower is better)
Translates to: SSLRILRSYASI*KLFSKSRCTSS
Trigger: CGAAGATGTGCAGCGGGACTTGGAGAACAGCTTGCAGATCGAAGCGTACGAGCGAAGGATACGGAGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TGCTTTACCTTGAGGGCCTCGAGCTCGCGCTCCATCTaGTTACAGAAGCTCTCGCTGTGTTCTCGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: CFTLRASSSRSI*LQKLSLCSRSF
Trigger: GAAGCTCCGAGAACACAGCGAGAGCTTCTGTAAGCAGATGGAGCGCGAGCTCGAGGCCCTCAAGGTAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TCGACTTCCCTTCTGGCAGGTCGTACAGGAAGAGTTTaGAGTCACAGACCACGGCGTAAGCCCTCTGCCATC +
Preference number: 6 (lower is better)
Translates to: STSLLAGRTGRV*SHRPRRKPSAI
Trigger: GATGGCAGAGGGCTTACGCCGTGGTCTGTGACTGCAAACTCTTCCTGTACGACCTGCCAGAAGGGAAGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TGTTTCCGGGAGCTTGATGTCAAAGTTGCTCGCTTCTaGTCCGTCGAAGGAGGACCAGGGGTAGAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: CFRELDVKVARF*SVEGGPGVEVH
Trigger: GTGCACCTCTACCCCTGGTCCTCCTTCGACGGAGCAGAAGCGAGCAACTTTGACATCAAGCTCCCGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CCA 72 bp GACGAGCTCTTCCTCAGCGTCCCTGTCGCTATGAGCTaGCAGCCCTTTGTTTCCGGGAGCTTGATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: DELFLSVPVAMS*QPFVSGSLMSK
Trigger: CTTTGACATCAAGCTCCCGGAAACAAAGGGCTGCCAGCTCATAGCGACAGGGACGCTGAGGAAGAGCTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS TCA 72 bp AATGATCTCTGCGATCTGCGCCTCCCAGTGCGCAACTaGCTCCTTCTTGGATGCCAGATCCTGCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: NDLCDLRLPVRN*LLLGCQILQLI
Trigger: GATGAGCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTGCGCACTGGGAGGCGCAGATCGCAGAGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp GGTTGGATATCATTTTGGATCGCAGTTCGGGGTCTCTaGGCATCTCTCGCCGCTGCTGTAGCCGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: GWISFWIAVRGL*ASLAAAVAALP
Trigger: AGGAAGAGCGGCTACAGCAGCGGCGAGAGATGCTCAGAGACCCCGAACTGCGATCCAAAATGATATCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CAA 72 bp TTCTCATCGAACAGCATGGCCCTCTCCCGTTCGTACTaGTCCTTCACGGTGCCTATGGCCTCCTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: FSSNSMALSRSY*SFTVPMASSIS
Trigger: TGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGAACGGGAGAGGGCCATGCTGTTCGATGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp GTCGCTATGAGCTGGCAGCCCTTTGTTTCCGGGAGCTaGATGTCAAAGTTGCTCGCTTCTGCTCCGTCGAAG +
Preference number: 6 (lower is better)
Translates to: VAMSWQPFVSGS*MSKLLASAPSK
Trigger: CTTCGACGGAGCAGAAGCGAGCAACTTTGACATCAAGCTCCCGGAAACAAAGGGCTGCCAGCTCATAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222724.2
CDS CAA 90 bp AACTTCTTGTTCTCATCGAACAGCATGGCCCTCTCCCGTTCGTACTaGTCCTTCACGGTGCCTATGGCCTCCTCCATCTCACTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: NFLFSSNSMALSRSY*SFTVPMASSISLCR
Trigger: ACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGACAAGTACGAACGGGAGAGGGCCATGCTGTTCGATGAGAACAAGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp TGCTGTAGCCGCTCTTCCTCGGGAACCTTGAAGACAAAACGTCGTTaGCTCCGTGTCCTCAGCATCTGCTTCTTGCTGTTGTCCGAGGTG +
Preference number: 6 (lower is better)
Translates to: CCSRSSSGTLKTKRR*LRVLSICFLLLSEV
Trigger: CACCTCGGACAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAAGGTTCCCGAGGAAGAGCGGCTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS TCA 72 bp GACTGCAATTCCAGCCGTGCAGACATGTCCAGCTTCTaGCTCCGACGAACTTTCCAGAGTGGATCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: DCNSSRADMSSF*LRRTFQSGSSV
Trigger: GACACTGGATCCACTCTGGAAAGTTCGTCGGAGTCAGAAGCTGGACATGTCTGCACGGCTGGAATTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp ACCTGGCTCTTCAGCCGGTTCTTATGCAAGATGGCCTaGAGCCCTTCAAGGATCCCTACCCACTTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: TWLFSRFLCKMA*SPSRIPTHFLF
Trigger: AAAGAGGAAGTGGGTAGGGATCCTTGAAGGGCTGCAGGCCATCTTGCATAAGAACCGGCTGAAGAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp CTCTGTGCACATAGTGGAGCTGGTGGATCGAGTCAATaGCCAACACCATCTCGCCAATGTAGAACCTCGCCA +
Preference number: 6 (lower is better)
Translates to: LCAHSGAGGSSQ*PTPSRQCRTSP
Trigger: TGGCGAGGTTCTACATTGGCGAGATGGTGTTGGCCATTGACTCGATCCACCAGCTCCACTATGTGCACAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp CGTTTGCTCCGTGTCCTCAGCATCTGCTTCTTGCTGTaGTCCGAGGTGTCGGGCACATTGAGGATTGTTCCT +
Preference number: 6 (lower is better)
Translates to: RLLRVLSICFLL*SEVSGTLRIVP
Trigger: AGGAACAATCCTCAATGTGCCCGACACCTCGGACAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS GCA 72 bp CAGTGCGCAACTGACTCCTTCTTGGATGCCAGATCCTaGAGCTCATCTTCCAGCTGTCTGTTTTGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: QCATDSFLDARS*SSSSSCLFWAV
Trigger: AACAGCCCAAAACAGACAGCTGGAAGATGAGCTGCAGGATCTGGCATCCAAGAAGGAGTCAGTTGCGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp CAATGTTTCTCAGCATGTCGTCGTCCACATCGAAGTTaGACGTGTCCGAAGGGCTGCTCACATCGGGAATGT +
Preference number: 6 (lower is better)
Translates to: QCFSACRRPHRS*TCPKGCSHREC
Trigger: ACATTCCCGATGTGAGCAGCCCTTCGGACACGTCCAACTTCGATGTGGACGACGACATGCTGAGAAACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp TCAATGTTTCTCAGCATGTCGTCGTCCACATCGAAGTaGGACGTGTCCGAAGGGCTGCTCACATCGGGAATG +
Preference number: 6 (lower is better)
Translates to: SMFLSMSSSTSK*DVSEGLLTSGM
Trigger: CATTCCCGATGTGAGCAGCCCTTCGGACACGTCCAACTTCGATGTGGACGACGACATGCTGAGAAACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp ATGCGTTCAAGCTCTTCATTCAGCCTCTTGATTTCCTaGTCGCGGTTTGAGTTGCCCAGGGCCCGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: MRSSSSFSLLIS*SRFELPRARVE
Trigger: TTCCACACGGGCCCTGGGCAACTCAAACCGCGACAAGGAAATCAAGAGGCTGAATGAAGAGCTTGAACGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp AAACGTCGTTTGCTCCGTGTCCTCAGCATCTGCTTCTaGCTGTTGTCCGAGGTGTCGGGCACATTGAGGATT +
Preference number: 6 (lower is better)
Translates to: KRRLLRVLSICF*LLSEVSGTLRI
Trigger: AATCCTCAATGTGCCCGACACCTCGGACAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACGACGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CAA 72 bp CGCTCTTCCTCGGGAACCTTGAAGACAAAACGTCGTTaGCTCCGTGTCCTCAGCATCTGCTTCTTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RSSSGTLKTKRR*LRVLSICFLLL
Trigger: CAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAAGGTTCCCGAGGAAGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CAA 72 bp GGAGTTGAGTGTTTGGTGGAATCAGAGTCAGGCTCTTaGTCAAAATCCTGGTCGGGGTCGGACATGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GVECLVESESGS*SKSWSGSDMLL
Trigger: GAGGAGCATGTCCGACCCCGACCAGGATTTTGACAAAGAGCCTGACTCTGATTCCACCAAACACTCAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp GCCTCCTCCATCTCACTGTGCCGTTCTCGCTTTGACTTTTCTAACTaGTCTTTCAGCATCAGGACCTCTTTCTGCAGGGCCAACTGGTGG +
Preference number: 6 (lower is better)
Translates to: ASSISLCRSRFDFSN*SFSIRTSFCRANWW
Trigger: CCACCAGTTGGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp ACAAAACGTCGTTTGCTCCGTGTCCTCAGCATCTGCTTCTTGCTGTaGTCCGAGGTGTCGGGCACATTGAGGATTGTTCCTGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: TKRRLLRVLSICFLL*SEVSGTLRIVPENL
Trigger: CAAGTTCTCAGGAACAATCCTCAATGTGCCCGACACCTCGGACAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACGACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CAA 90 bp TTGAAGACAAAACGTCGTTTGCTCCGTGTCCTCAGCATCTGCTTCTaGCTGTTGTCCGAGGTGTCGGGCACATTGAGGATTGTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: LKTKRRLLRVLSICF*LLSEVSGTLRIVPE
Trigger: CTCAGGAACAATCCTCAATGTGCCCGACACCTCGGACAACAGCAAGAAGCAGATGCTGAGGACACGGAGCAAACGACGTTTTGTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS TCA 72 bp CTCCCGATCACTTTGATGATCTCGAAGTCTTCTCGATaGAGCTGCATGTCCTTCACGAGCTGGGTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: LPITLMISKSSR*SCMSFTSWVKG
Trigger: GCCTTTCACCCAGCTCGTGAAGGACATGCAGCTTCATCGAGAAGACTTCGAGATCATCAAAGTGATCGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000222196.2
CDS TCA 72 bp GCTTCTTCAGAGACATCGGTGACATGGGATGGGAACTaGAACCGCTCCTCGTGGTTCATGATCTTCCCGTAT +
Preference number: 6 (lower is better)
Translates to: ASSETSVTWDGN*NRSSWFMIFPY
Trigger: ATACGGGAAGATCATGAACCACGAGGAGCGGTTTCAGTTCCCATCCCATGTCACCGATGTCTCTGAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp CGCTGCACATCTTCGTCTTTGGTTAGCGTGTTAGACTaGGTCATGCTCTTCAGAGAGCCCCGGTCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: RCTSSSLVSVLD*VMLFREPRSEK
Trigger: CTTTTCTGACCGGGGCTCTCTGAAGAGCATGACTCAGTCTAACACGCTAACCAAAGACGAAGATGTGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp TACTCTTCATGCGTTCAAGCTCTTCATTCAGCCTCTTaGTTTCCTTGTCGCGGTTTGAGTTGCCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: YSSCVQALHSAS*FPCRGLSCPGP
Trigger: GGGCCCTGGGCAACTCAAACCGCGACAAGGAAATCAAGAGGCTGAATGAAGAGCTTGAACGCATGAAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp GTTGTCCGAGGTGTCGGGCACATTGAGGATTGTTCCTaGGAACTTGTTTTTGAAGTAGATGAGGCGAGGGGG +
Preference number: 6 (lower is better)
Translates to: VVRGVGHIEDCS*ELVFEVDEARG
Trigger: CCCCCTCGCCTCATCTACTTCAAAAACAAGTTCTCAGGAACAATCCTCAATGTGCCCGACACCTCGGACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041965.5
ENSMUST00000220657.2
CDS CCA 72 bp CATGTCCAGCTTCTGACTCCGACGAACTTTCCAGAGTaGATCCAGTGTCCTGGATCCCAAACTAGAACTTCG +
Preference number: 6 (lower is better)
Translates to: HVQLLTPTNFPE*IQCPGSQTRTS
Trigger: CGAAGTTCTAGTTTGGGATCCAGGACACTGGATCCACTCTGGAAAGTTCGTCGGAGTCAGAAGCTGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp CCTGGCGAAGTGTCACTGTGTCCTCCAGCTGGCGTTCGAGCCTGTTaGAATCTGCCATTTTACTCTTCATGCGTTCAAGCTCTTCATTCA +
Preference number: 6 (lower is better)
Translates to: PGEVSLCPPAGVRAC*NLPFYSSCVQALHS
Trigger: TGAATGAAGAGCTTGAACGCATGAAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGCCAGCTGGAGGACACAGTGACACTTCGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp TCACGGTGCCTATGGCCTCCTCCATCTCACTGTGCCGTTCTCGCTTaGACTTTTCTAACTTGTCTTTCAGCATCAGGACCTCTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SRCLWPPPSHCAVLA*TFLTCLSASGPLSA
Trigger: TGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp TGTCACTGTGTCCTCCAGCTGGCGTTCGAGCCTGTTTaGATCTGCCATTTTACTCTTCATGCGTTCAAGCTC +
Preference number: 6 (lower is better)
Translates to: CHCVLQLAFEPV*ICHFTLHAFKL
Trigger: GAGCTTGAACGCATGAAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGCCAGCTGGAGGACACAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TTTTCTAACTTGTCTTTCAGCATCAGGACCTCTTTCTaGAGGGCCAACTGGTGGCTTTCGGAGTCGTGGACT +
Preference number: 6 (lower is better)
Translates to: FSNLSFSIRTSF*RANWWLSESWT
Trigger: AGTCCACGACTCCGAAAGCCACCAGTTGGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS GCA 72 bp TCCTTCACGGTGCCTATGGCCTCCTCCATCTCACTGTaGCGTTCTCGCTTTGACTTTTCTAACTTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: SFTVPMASSISL*RSRFDFSNLSF
Trigger: GAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGCACCGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp TGCCCAAGTCGGCGCTCTCTGCTGCATATTAGTCTCTaGATAAGGTCTTTTGCTTCTTCAGAGACATCGGTG +
Preference number: 6 (lower is better)
Translates to: CPSRRSLLHISL*IRSFASSETSV
Trigger: CACCGATGTCTCTGAAGAAGCAAAAGACCTTATCCAGAGACTAATATGCAGCAGAGAGCGCCGACTTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp GTGTCACTGTGTCCTCCAGCTGGCGTTCGAGCCTGTTaGAATCTGCCATTTTACTCTTCATGCGTTCAAGCT +
Preference number: 6 (lower is better)
Translates to: VSLCPPAGVRAC*NLPFYSSCVQA
Trigger: AGCTTGAACGCATGAAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGCCAGCTGGAGGACACAGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp GTCTTTTGCTTCTTCAGAGACATCGGTGACATGGGATaGGAACTGAAACCGCTCCTCGTGGTTCATGATCTT +
Preference number: 6 (lower is better)
Translates to: VFCFFRDIGDMG*ELKPLLVVHDL
Trigger: AAGATCATGAACCACGAGGAGCGGTTTCAGTTCCCATCCCATGTCACCGATGTCTCTGAAGAAGCAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp ATCTCACTGTGCCGTTCTCGCTTTGACTTTTCTAACTaGTCTTTCAGCATCAGGACCTCTTTCTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ISLCRSRFDFSN*SFSIRTSFCRA
Trigger: GGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp CTATGGCCTCCTCCATCTCACTGTGCCGTTCTCGCTTaGACTTTTCTAACTTGTCTTTCAGCATCAGGACCT +
Preference number: 6 (lower is better)
Translates to: LWPPPSHCAVLA*TFLTCLSASGP
Trigger: AGGTCCTGATGCTGAAAGACAAGTTAGAAAAGTCAAAGCGAGAACGGCACAGTGAGATGGAGGAGGCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS TCA 72 bp GCAGGGTCAGCAGATCACCACCTACATAGTAATCCATaGCCAAGTACAGGTAGTTCTCATCCTGAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: AGSADHHLHSNP*PSTGSSHPERH
Trigger: ATGCCTTTCAGGATGAGAACTACCTGTACTTGGTCATGGATTACTATGTAGGTGGTGATCTGCTGACCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp GATGGGGACAAGTCCATCTTTGAAGCCTGTGTTTCCTaGTCACTAGCTGAGCTGGTTCTAAAAGTCAGATCA +
Preference number: 6 (lower is better)
Translates to: DGDKSIFEACVS*SLAELVLKVRS
Trigger: TGATCTGACTTTTAGAACCAGCTCAGCTAGTGACCAGGAAACACAGGCTTCAAAGATGGACTTGTCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp GCAGTGTTGAAATACTCAAAGATAGAATCCTGGAAATCTGGAAGTTaGAGCCCTGTATCCGCTCTAAACTTCTCTTCCATCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AVLKYSKIESWKSGS*SPVSALNFSSILFL
Trigger: GAGGAAGAGGATGGAAGAGAAGTTTAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 90 bp GCTGAGCTGGTTCTAAAAGTCAGATCATGTGCAAGAGGAGCAGTGTaGAAATACTCAAAGATAGAATCCTGGAAATCTGGAAGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: AELVLKVRSCARGAV*KYSKIESWKSGSLS
Trigger: GCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACTGCTCCTCTTGCACATGATCTGACTTTTAGAACCAGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CCA 72 bp AGTGTTGAAATACTCAAAGATAGAATCCTGGAAATCTaGAAGTTTGAGCCCTGTATCCGCTCTAAACTTCTC +
Preference number: 6 (lower is better)
Translates to: SVEILKDRILEI*KFEPCIRSKLL
Trigger: GAGAAGTTTAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp AAATACTCAAAGATAGAATCCTGGAAATCTGGAAGTTaGAGCCCTGTATCCGCTCTAAACTTCTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: KYSKIESWKSGS*SPVSALNFSSI
Trigger: GATGGAAGAGAAGTTTAGAGCGGATACAGGGCTCAAACTTCCAGATTTCCAGGATTCTATCTTTGAGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5
CDS CAA 72 bp GTTCTAAAAGTCAGATCATGTGCAAGAGGAGCAGTGTaGAAATACTCAAAGATAGAATCCTGGAAATCTGGA +
Preference number: 6 (lower is better)
Translates to: VLKVRSCARGAV*KYSKIESWKSG
Trigger: TCCAGATTTCCAGGATTCTATCTTTGAGTATTTCAACACTGCTCCTCTTGCACATGATCTGACTTTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041965.5