Pregenerated sensors for CDC40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038446Ensembl transcript IDs: ENSMUST00000044166.9
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCCTGTATTCCTGCCACCCTGCTGGGTGGGTCGGTTAAGTGCCTaGCACCTTTCTGAGTCGTTAGCTACATCATTTCCCATAAGATCC | + |
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Preference number: 1 (lower is better) Translates to: PPVFLPPCWVGRLSA*HLSESLATSFPIRS Trigger: GGATCTTATGGGAAATGATGTAGCTAACGACTCAGAAAGGTGCCAGGCACTTAACCGACCCACCCAGCAGGGTGGCAGGAATACAGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR TCA 90 bp | GAACTCATTATTATTCATCCAGTGGCAAAGCAGAGCCTGAGACCCTaGTTTCTGGGTGCAGCCAGGGCCTTACAGACAGTGATTGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: ELIIIHPVAKQSLRP*FLGAARALQTVIAS Trigger: GCTTGCAATCACTGTCTGTAAGGCCCTGGCTGCACCCAGAAATCAGGGTCTCAGGCTCTGCTTTGCCACTGGATGAATAATAATGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGTGGGTGACTGTAGGTaGCTGTGGGTGACTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NSFLLYATLPGRHRNGNGVGDCR*LWVTVG Trigger: ACCCACAGTCACCCACAGTCACCTACAGTCACCCAC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTCTCCGCCTGTATTCCTaGCACCCTGCTGGGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSLRLYS*HPAGWV Trigger: GACCCACCCAGCAGGGTGGCAGGAATACAGGCGGAG...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGACTGTAGGCGACTGTaGGTGACTGTGGGTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: NSFLLYATLPGRHRNGNGDCRRL*VTVGDC Trigger: ACAGTCACCCACAGTCACCCACAGTCGCCTACAGTC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACGTAGGTGACTGTAGGTaGCTGTGGGTGACTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNVGDCR*LWVTVG Trigger: ACCCACAGTCACCCACAGTCACCTACAGTCACCTAC...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGTAGGCGACTGTGGGTaGCTGTGGGTGACTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSVGDCG*LWVTVG Trigger: ACCTACAGTCACCCACAGTCACCCACAGTCGCCTAC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCTTGATTCAGCAGCGGTaGCTGTGGGTGACTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: NSFLLYATLPGRHRNGNGLIQQR*LWVTVG Trigger: ACCTACAGTCACCCACAGTCACCGCTGCTGAATCAA...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGGTCGGTTAAGTGCCTaGCACCTTTCTGAGTCGTTA | + |
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Preference number: 2 (lower is better) Translates to: NSFLLYATLPGRHRNGNGGRLSA*HLSESL Trigger: TAACGACTCAGAAAGGTGCCAGGCACTTAACCGACC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTCTTGGCTTGTTCCCTTaGGTTCCAGCTTCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSLGLFP*VPASET Trigger: TGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAG...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR CAA 90 bp | ACAGACAGTGATTGCAAGCAACATTCAAAGCCTTGGCTTGTTCCCTaGAGTTCCAGCTTCAGAGACAACCTCACTTTCTGCTTAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TDSDCKQHSKPWLVP*SSSFRDNLTFCLGL Trigger: TAGACCTAAGCAGAAAGTGAGGTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTTGCAATCACTGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGAAAGCTGCAACCAATaGGGGTCACTAGTTTACACG | + |
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Preference number: 2 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSESCNQ*GSLVYT Trigger: CGTGTAAACTAGTGACCCTCATTGGTTGCAGCTTTC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGACAACCTCACTTTCTaGTTAGGTCTACACAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSDNLTF*LGLHSP Trigger: AGGACTGTGTAGACCTAAGCAGAAAGTGAGGTTGTC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR CCA 72 bp | CTGTGGGTGGCTCCGCCTGTATTCCTGCCACCCTGCTaGGTGGGTCGGTTAAGTGCCTGGCACCTTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LWVAPPVFLPPC*VGRLSAWHLSE Trigger: CTCAGAAAGGTGCCAGGCACTTAACCGACCCACCCAGCAGGGTGGCAGGAATACAGGCGGAGCCACCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR CCA 72 bp | TTCCTGCCACCCTGCTGGGTGGGTCGGTTAAGTGCCTaGCACCTTTCTGAGTCGTTAGCTACATCATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FLPPCWVGRLSA*HLSESLATSFP Trigger: GGGAAATGATGTAGCTAACGACTCAGAAAGGTGCCAGGCACTTAACCGACCCACCCAGCAGGGTGGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR TCA 72 bp | ATTATTCATCCAGTGGCAAAGCAGAGCCTGAGACCCTaGTTTCTGGGTGCAGCCAGGGCCTTACAGACAGTG | + |
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Preference number: 3 (lower is better) Translates to: IIHPVAKQSLRP*FLGAARALQTV Trigger: CACTGTCTGTAAGGCCCTGGCTGCACCCAGAAATCAGGGTCTCAGGCTCTGCTTTGCCACTGGATGAATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR TCA 72 bp | CCTGATTTCTGGGTGCAGCCAGGGCCTTACAGACAGTaGTTGCAAGCAACATTCAAAGCCTTGGCTTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: PDFWVQPGPYRQ*LQATFKALACS Trigger: GGAACAAGCCAAGGCTTTGAATGTTGCTTGCAATCACTGTCTGTAAGGCCCTGGCTGCACCCAGAAATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR GCA 72 bp | ATTTCTGGGTGCAGCCAGGGCCTTACAGACAGTGATTaGAAGCAACATTCAAAGCCTTGGCTTGTTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: ISGCSQGLTDSD*KQHSKPWLVPL Trigger: CAAGGGAACAAGCCAAGGCTTTGAATGTTGCTTGCAATCACTGTCTGTAAGGCCCTGGCTGCACCCAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR CAA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCCTCCAAAACGATCCTTaGATCCTTTCAGTGACATCA | + |
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Preference number: 3 (lower is better) Translates to: NSFLLYATLPGRHRNGNGLQNDP*ILSVTS Trigger: TGATGTCACTGAAAGGATCAAAGGATCGTTTTGGAG...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR TCA 72 bp | ATTGCAAGCAACATTCAAAGCCTTGGCTTGTTCCCTTaGGTTCCAGCTTCAGAGACAACCTCACTTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: IASNIQSLGLFP*VPASETTSLSA Trigger: AGCAGAAAGTGAGGTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR CCA 72 bp | ATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTaGCCAGAGGGAACTCATTATTATTCATCCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ITSGILDSVFTL*PEGTHYYSSSG Trigger: GCCACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGCCAACAGTAACTACTaGTCAAATATAACCAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSANSNY*SNITSC Trigger: ACAACTGGTTATATTTGACAAGTAGTTACTGTTGGC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGGAGAGAGTCCGCGGCTaGCAGCGGACACCGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQERVRG*QRTPTA Trigger: GGCAGTCGGTGTCCGCTGCCAGCCGCGGACTCTCTC...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGGCAGCGGACACCGACTaGCCTCACTGTCCGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQAADTD*PHCPNP Trigger: CGGATTCGGACAGTGAGGGCAGTCGGTGTCCGCTGC...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGATTTGGTCAAGTGCATaGGAGAGTCCGCGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQIWSSA*ESPRLA Trigger: TGCCAGCCGCGGACTCTCTCATGCACTTGACCAAAT...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGGGGTTCCTGCAGTGTTaGAGCAGATGTCTCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQGFLQC*SRCLSQ Trigger: CTGTGAGAGACATCTGCTTCAACACTGCAGGAACCC...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCCAGATCTTCCTTAACTaGCACCTCCGGAGCCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGQIFLN*HLRSRV Trigger: GACTCGGCTCCGGAGGTGGCAGTTAAGGAAGATCTG...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGCCGCACTGAGGAACTaGGTTCCTGCAGTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGAALRN*VPAVLK Trigger: CTTCAACACTGCAGGAACCCAGTTCCTCAGTGCGGC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCATGGGGGTGCCACACTaGGCCTATGCACACTTTATC | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGMGVPH*AYAHFI Trigger: GATAAAGTGTGCATAGGCGCAGTGTGGCACCCCCAT...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCCGGTCAGAGAGAGCTTaGCTGAAGGCGATTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGRSERA*LKAIWS Trigger: TGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCG...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACCAGAGAGAGCTTGGCTaGAGGCGATTTGGTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNQRELG*RRFGQV Trigger: CACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTG...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGATAGCTCATGTCTGGTaGGAAGTCTACCTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQIAHVW*EVYLTS Trigger: GCTTGTCAGGTAGACTTCTCACCAGACATGAGCTAT...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGAGGAACTGGGTTCCTaGAGTGTTGAAGCAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGEELGS*SVEADV Trigger: GACATCTGCTTCAACACTGCAGGAACCCAGTTCCTC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCGCCACACTGCGCCTATaGACACTTTATCATGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGATLRL*TLYHGL Trigger: AAGCCCATGATAAAGTGTGCATAGGCGCAGTGTGGC...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGGATGTGTGCTGGCTCTaGATACCCAGAAAGCATATT | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQDVCWL*IPRKHI Trigger: AATATGCTTTCTGGGTATGCAGAGCCAGCACACATC...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGACTCAGGAGCGAACATaGTCTCATAGGTGGGATTAT | + |
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Preference number: 4 (lower is better) Translates to: SFDPFSDITGTNATACQQTQERT*SHRWDY Trigger: ATAATCCCACCTATGAGACCATGTTCGCTCCTGAGT...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACAGCAGGGTCAAGGTaGACTCCAGTCTCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGTAGSR*TPVSRS Trigger: AGATCTGGAGACTGGAGTTCACCTTGACCCTGCTGT...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTTGCCGATCATATTCCTaGACAATCTCTCCACTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSCRSYS*TISPLR Trigger: CCGCAGTGGAGAGATTGTTCAGGAATATGATCGGCA...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR TCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCCCCATTTCCATCTCCTaGAATCACATAGCTCATGTC | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGPISIS*NHIAHV Trigger: GACATGAGCTATGTGATTTCAGGAGATGGAAATGGG...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACCTAGGGGCAGCCATTTaGTGTGTTCGAAAGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNLGAAI*CVRKGF Trigger: AAATCCCTTTCGAACACAGCAAATGGCTGCCCCTAG...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGAACAATCTCTCCACTaGGGATGTCCCACTGTACGA | + |
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Preference number: 4 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSEQSLH*GCPTVR Trigger: TCGTACAGTGGGACATCCGCAGTGGAGAGATTGTTC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGACGGGCATTGAGTGCATaGTGGGCTCTGCTATGTACT | + |
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Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGRALSA*WALLCT Trigger: AGTACATAGCAGAGCCCAGCATGCACTCAATGCCCG...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCTCGAAAGGGATTTTCTaGTCCAAACTCAGGAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGSKGIF*SKLRSE Trigger: TTCGCTCCTGAGTTTGGACCAGAAAATCCCTTTCGA...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACTGGTTGTCCATTGACTaGCATGCTAGCCATTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNWLSID*HASHFP Trigger: TGGGAAATGGCTAGCATGCCAGTCAATGGACAACCA...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| 3UTR CAA 72 bp | GATTGCAAGCAACATTCAAAGCCTTGGCTTGTTCCCTaGAGTTCCAGCTTCAGAGACAACCTCACTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: DCKQHSKPWLVP*SSSFRDNLTFC Trigger: GCAGAAAGTGAGGTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTTGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCTTCATCCACATATTTTaGCCATGGTCCCAAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGFIHIF*PWSQET Trigger: GGTTTCTTGGGACCATGGGCAAAATATGTGGATGAA...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGACTGACAAGCGTAGCCTaGTACCATGTGGCCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGLTSVA*YHVALK Trigger: TTTAAGGGCCACATGGTAGCAGGCTACGCTTGTCAG...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACGACTGTAGAGTTTTGTaGTCTTCCAGTCCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNDCRVL*SSSPRC Trigger: ACATCTGGGACTGGAAGACCACAAAACTCTACAGTC...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACTATACTGAACTTCTTTaGCAGCAGGGTCAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNYTELL*QQGQGE Trigger: TTCACCTTGACCCTGCTGTCAAAGAAGTTCAGTATA...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACGCGGTTTGTAAATCTTaGTATACACTGTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNAVCKS*YTLSCL Trigger: GAGACAGGACAGTGTATATCAAGATTTACAAACCGC...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR GCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCTGTGAAGGTAGGACCTaGCTTGATAGTCATACATTT | + |
|
Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGCEGRT*LDSHTF Trigger: AAATGTATGACTATCAAGGCAGGTCCTACCTTCACA...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CCA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCCACATATTTTGCCCATaGTCCCAAGAAACCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSFLLYATLPGRHRNGNGHIFCP*SQETIN Trigger: ATTGATGGTTTCTTGGGACCATGGGCAAAATATGTG...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACCTCACAGCTTTACTGTaGCCAATAAATGTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNLTALL*PINVLR Trigger: TCTGAGAACATTTATTGGTCACAGTAAAGCTGTGAG...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| 3UTR CAA 72 bp | CAGGGACAAACGCAACTGCCTGCCAACAGTAACTACTaGTCAAATATAACCAGTTGTCATTCCCCATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQTQLPANSNY*SNITSCHSPYK Trigger: TTTATATGGGGAATGACAACTGGTTATATTTGACAAGTAGTTACTGTTGGCAGGCAGTTGCGTTTGTCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGACTTTTGTTCTTCTTCTaGAGGTTTGGCCACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGLLFFF*RFGHIF Trigger: AAAGATGTGGCCAAACCTTCAGAAGAAGAACAAAAG...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR GCA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTGCAAATGTCCTTCTTTaGTGTTCAAACATGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSANVLL*CSNMKS Trigger: TGACTTCATGTTTGAACAGCAAAGAAGGACATTTGC...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGAGCCACAAAGAGATTTTaGTTATCTTCATCGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGATKRF*LSSSGL Trigger: CAATCCCGATGAAGATAAGCAAAATCTCTTTGTGGC...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGATCTTCTTATTCAATCTaGATCTGTTCTGTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGSSYSI*ICSVLQ Trigger: TTGGAGCACAGAACAGATTCAGATTGAATAAGAAGA...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACATGGTCTCATAGGTaGGATTATACTGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGTWSHR*DYTELL Trigger: AAGAAGTTCAGTATAATCCCACCTATGAGACCATGT...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGACCAAAAATTAAGATTTaGTTGTCCATTGACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEITSGILDSVFTLWPEGPKIKI*LSIDWH Trigger: ATGCCAGTCAATGGACAACCAAATCTTAATTTTTGG...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS TCA 90 bp | CACCTCCGGAGCCGAGTCCACCGCCACGGTCAGAGAGAGCTTGGCTaGAGGCGATTTGGTCAAGTGCATGAGAGAGTCCGCGGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLRSRVHRHGQRELG*RRFGQVHERVRGWQ Trigger: CTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGTGGACTCGGCTCCGGAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS GCA 90 bp | ACCGCCACGGTCAGAGAGAGCTTGGCTGAAGGCGATTTGGTCAAGTaGATGAGAGAGTCCGCGGCTGGCAGCGGACACCGACTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TATVRESLAEGDLVK*MRESAAGSGHRLPS Trigger: TGAGGGCAGTCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS TCA 90 bp | CCACGGTCAGAGAGAGCTTGGCTGAAGGCGATTTGGTCAAGTGCATaGGAGAGTCCGCGGCTGGCAGCGGACACCGACTGCCCTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRSERAWLKAIWSSA*ESPRLAADTDCPHC Trigger: ACAGTGAGGGCAGTCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCGCCTGTATTCCTGCCACCCTGCTGGGTGGGTCGGTTAAGTGCCTGGCACTGGGTTCCTGCAGTGTaGAAGCAGATGTCTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: APPVFLPPCWVGRLSAWHWVPAV*KQMSLT Trigger: TGTGAGAGACATCTGCTTCAACACTGCAGGAACCCA...GTGCCAGGCACTTAACCGACCCACCCAGCAGGGTGGCAGGAATACAGGCGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | GCTCCGCCTGTATTCCTGCCACCCTGCTGGGTGGGTCGGTTAAGTGCCTGGCACCTAGCCATTTCCCATTaGGAGACAAAGTCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: APPVFLPPCWVGRLSAWHLAISH*ETKSLR Trigger: CCGCAGTGACTTTGTCTCCAAATGGGAAATGGCTAG...GTGCCAGGCACTTAACCGACCCACCCAGCAGGGTGGCAGGAATACAGGCGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS GCA 90 bp | AGGCCGTCCCAACCACACGTGATGACCTTGGAGGTCTCATGGGGGTaGCACACTGCGCCTATGCACACTTTATCATGGGCTTTAAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSQPHVMTLEVSWG*HTAPMHTLSWALKR Trigger: TCGCTTTAAAGCCCATGATAAAGTGTGCATAGGCGCAGTGTGGCACCCCCATGAGACCTCCAAGGTCATCACGTGTGGTTGGGACGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CCA 90 bp | TTAATGAGGCCGTCCCAACCACACGTGATGACCTTGGAGGTCTCATaGGGGTGCCACACTGCGCCTATGCACACTTTATCATGGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LMRPSQPHVMTLEVS*GCHTAPMHTLSWAL Trigger: TAAAGCCCATGATAAAGTGTGCATAGGCGCAGTGTGGCACCCCCATGAGACCTCCAAGGTCATCACGTGTGGTTGGGACGGCCTCATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS GCA 90 bp | GCTGGCTCTGCATACCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTTCGAAAGGGATTTTCTGGTCCAAACTCAGGAGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGSAYPESIFLGAAI*CVRKGFSGPNSGAN Trigger: GTTCGCTCCTGAGTTTGGACCAGAAAATCCCTTTCGAACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGGTATGCAGAGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS GCA 90 bp | GAGTTTAAGGTACCTGTCGTAGGCCGCACTGAGGAACTGGGTTCCTaGAGTGTTGAAGCAGATGTCTCTCACAGCTTTACTGTGACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EFKVPVVGRTEELGS*SVEADVSHSFTVTN Trigger: ATTGGTCACAGTAAAGCTGTGAGAGACATCTGCTTCAACACTGCAGGAACCCAGTTCCTCAGTGCGGCCTACGACAGGTACCTTAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAACATTCAAAGCCTTGGCTTGTTCCCTTGAGTTCCAGCTTCAGAGACAACACGGTCAGAGAGAGCTaGGCTGAAGGCGATTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQHSKPWLVPLSSSFRDNTVRES*AEGDLV Trigger: GACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGT...GTTGTCTCTGAAGCTGGAACTCAAGGGAACAAGCCAAGGCTTTGAATGTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGAGCGACTGTAGAGTTTaGTGGTCTTCCAGTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFDPFSDITGTNATACQQSDCRV*WSSSPR Trigger: TCTGGGACTGGAAGACCACAAAACTCTACAGTCGCT...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | TCCTTTGATCCTTTCAGTGACATCACAGGGACAAACGCAACTGCCTGCCAACAGAGATTTGGTTGTCCATaGACTGGCATGCTAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SFDPFSDITGTNATACQQRFGCP*TGMLAI Trigger: AATGGCTAGCATGCCAGTCAATGGACAACCAAATCT...CTGTTGGCAGGCAGTTGCGTTTGTCCCTGTGATGTCACTGAAAGGATCAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS TCA 90 bp | ACAAAAACAATCGTGTTGACAGCCCCCAGATGCCGATCATATTCCTaGACAATCTCTCCACTGCGGATGTCCCACTGTACGATCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TKTIVLTAPRCRSYS*TISPLRMSHCTIFL Trigger: TAAGAAGATCGTACAGTGGGACATCCGCAGTGGAGAGATTGTTCAGGAATATGATCGGCATCTGGGGGCTGTCAACACGATTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTTCTAGGGGCAGCCATTaGCTGTGTTCGAAAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSSRGSH*LCSKGI Trigger: AATCCCTTTCGAACACAGCAAATGGCTGCCCCTAGA...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGATTGGCTGAAGGCGATTaGGTCAAGTGCATGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KEITSGILDSVFTLWPEGLAEGD*VKCMRE Trigger: CTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAA...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACAAAAACAATCGTGTaGACAGCCCCCAGATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KEITSGILDSVFTLWPEGTKTIV*TAPRCR Trigger: TCGGCATCTGGGGGCTGTCAACACGATTGTTTTTGT...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCAGCAAATGTCCTTCTTaGCTGTTCAAACATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSFLLYATLPGRHRNGNGSKCPS*LFKHEV Trigger: GACTTCATGTTTGAACAGCAAAGAAGGACATTTGCT...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | AATTCCTTCCTCCTATATGCCACCCTTCCTGGAAGACACAGAAATGGCAATGGCAGCCACAAAGAGATTTaGCTTATCTTCATCGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NSFLLYATLPGRHRNGNGSHKEI*LIFIGI Trigger: AATCCCGATGAAGATAAGCAAAATCTCTTTGTGGCT...GCCATTGCCATTTCTGTGTCTTCCAGGAAGGGTGGCATATAGGAGGAAGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATTACAAGTGGTATTTTGGACTCTGTCTTCACACTCTGGCCAGAGGGATTTCATCCACATATTTaGCCCATGGTCCCAAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KEITSGILDSVFTLWPEGFHPHI*PMVPRN Trigger: GTTTCTTGGGACCATGGGCAAAATATGTGGATGAAA...TCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAAAATACCACTTGTAATTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS-3UTR CAA 90 bp | TTGGACTCTGTCTTCACACTCTGGCCAGAGGGAACTCATTATTATTCATCCAGTAAAATTAAGATTTGGTaGTCCATTGACTGGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSVFTLWPEGTHYYSSSKIKIW*SIDWHA Trigger: AGCATGCCAGTCAATGGACAACCAAATCTTAATTTT...ACTGGATGAATAATAATGAGTTCCCTCTGGCCAGAGTGTGAAGACAGAGTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CAA 90 bp | GCCGAGTCCACCGCCACGGTCAGAGAGAGCTTGGCTGAAGGCGATTaGGTCAAGTGCATGAGAGAGTCCGCGGCTGGCAGCGGACACCGA | + |
|
Preference number: 6 (lower is better) Translates to: AESTATVRESLAEGD*VKCMRESAAGSGHR Trigger: TCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGTGGACTCGGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CAA 90 bp | ACTGCCACCTCCGGAGCCGAGTCCACCGCCACGGTCAGAGAGAGCTaGGCTGAAGGCGATTTGGTCAAGTGCATGAGAGAGTCCGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TATSGAESTATVRES*AEGDLVKCMRESAA Trigger: AGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGTGGACTCGGCTCCGGAGGTGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS TCA 72 bp | GAGAGAGCTTGGCTGAAGGCGATTTGGTCAAGTGCATaGGAGAGTCCGCGGCTGGCAGCGGACACCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ERAWLKAIWSSA*ESPRLAADTDC Trigger: GCAGTCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CCA 72 bp | AGGCGATTTGGTCAAGTGCATGAGAGAGTCCGCGGCTaGCAGCGGACACCGACTGCCCTCACTGTCCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RRFGQVHERVRG*QRTPTALTVRI Trigger: GATTCGGACAGTGAGGGCAGTCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS TCA 72 bp | AGCCGAGTCCACCGCCACGGTCAGAGAGAGCTTGGCTaGAGGCGATTTGGTCAAGTGCATGAGAGAGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRVHRHGQRELG*RRFGQVHERVR Trigger: GCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGTGGACTCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS GCA 72 bp | GTCAGAGAGAGCTTGGCTGAAGGCGATTTGGTCAAGTaGATGAGAGAGTCCGCGGCTGGCAGCGGACACCGA | + |
|
Preference number: 6 (lower is better) Translates to: VRESLAEGDLVK*MRESAAGSGHR Trigger: TCGGTGTCCGCTGCCAGCCGCGGACTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS CAA 72 bp | TCCGGAGCCGAGTCCACCGCCACGGTCAGAGAGAGCTaGGCTGAAGGCGATTTGGTCAAGTGCATGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAESTATVRES*AEGDLVKCMRE Trigger: CTCTCTCATGCACTTGACCAAATCGCCTTCAGCCAAGCTCTCTCTGACCGTGGCGGTGGACTCGGCTCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS CCA 72 bp | CCGTCCCAACCACACGTGATGACCTTGGAGGTCTCATaGGGGTGCCACACTGCGCCTATGCACACTTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: PSQPHVMTLEVS*GCHTAPMHTLS Trigger: TGATAAAGTGTGCATAGGCGCAGTGTGGCACCCCCATGAGACCTCCAAGGTCATCACGTGTGGTTGGGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS CAA 72 bp | AACTTAATGAGGCCGTCCCAACCACACGTGATGACCTaGGAGGTCTCATGGGGGTGCCACACTGCGCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: NLMRPSQPHVMT*EVSWGCHTAPM Trigger: CATAGGCGCAGTGTGGCACCCCCATGAGACCTCCAAGGTCATCACGTGTGGTTGGGACGGCCTCATTAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS GCA 72 bp | CAACCACACGTGATGACCTTGGAGGTCTCATGGGGGTaGCACACTGCGCCTATGCACACTTTATCATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPHVMTLEVSWG*HTAPMHTLSWA Trigger: AGCCCATGATAAAGTGTGCATAGGCGCAGTGTGGCACCCCCATGAGACCTCCAAGGTCATCACGTGTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS TCA 72 bp | ATCGTGTTGACAGCCCCCAGATGCCGATCATATTCCTaGACAATCTCTCCACTGCGGATGTCCCACTGTACG | + |
|
Preference number: 6 (lower is better) Translates to: IVLTAPRCRSYS*TISPLRMSHCT Trigger: CGTACAGTGGGACATCCGCAGTGGAGAGATTGTTCAGGAATATGATCGGCATCTGGGGGCTGTCAACACGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS CAA 90 bp | TGCTGGCTCTGCATACCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTTCGAAAGGGATTTTCTGGTCCAAACTCAGGAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CWLCIPRKHISRGSH*LCSKGIFWSKLRSE Trigger: TTCGCTCCTGAGTTTGGACCAGAAAATCCCTTTCGAACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGGTATGCAGAGCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS GCA 72 bp | GCATACCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTTCGAAAGGGATTTTCTGGTCCAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: AYPESIFLGAAI*CVRKGFSGPNS Trigger: TGAGTTTGGACCAGAAAATCCCTTTCGAACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGGTATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
||
| CDS CAA 72 bp | TGCATACCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTTCGAAAGGGATTTTCTGGTCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: CIPRKHISRGSH*LCSKGIFWSKL Trigger: GAGTTTGGACCAGAAAATCCCTTTCGAACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGGTATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CAA 90 bp | CCGTACGTAGCAAATGTCCTTCTTTGCTGTTCAAACATGAAGTCATaGATGTGTGCTGGCTCTGCATACCCAGAAAGCATATTTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: PYVANVLLCCSNMKS*MCAGSAYPESIFLG Trigger: CCCTAGAAATATGCTTTCTGGGTATGCAGAGCCAGCACACATCAATGACTTCATGTTTGAACAGCAAAGAAGGACATTTGCTACGTACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS TCA 72 bp | CGAATCTTCGGTTCTCATCAACAAAAACAATCGTGTTaGCAGCCCCCAGATGCCGATCATATTCCTGAACAA | + |
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Preference number: 6 (lower is better) Translates to: RIFGSHQQKQSC*QPPDADHIPEQ Trigger: TTGTTCAGGAATATGATCGGCATCTGGGGGCTGTCAACACGATTGTTTTTGTTGATGAGAACCGAAGATTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CAA 90 bp | CCACTGTACGATCTTCTTATCAGACATCCCAGCCACAAAGAGATTTaGCTTATCTTCATCGGGATTGAACTTGACGCAGTAGGGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: PLYDLLIRHPSHKEI*LIFIGIELDAVGYF Trigger: AAAGTACCCTACTGCGTCAAGTTCAATCCCGATGAAGATAAGCAAAATCTCTTTGTGGCTGGGATGTCTGATAAGAAGATCGTACAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CCA 72 bp | AATCTGAATCTGTTCTGTGCTCCAAAAATTAAGATTTaGTTGTCCATTGACTGGCATGCTAGCCATTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NLNLFCAPKIKI*LSIDWHASHFP Trigger: TGGGAAATGGCTAGCATGCCAGTCAATGGACAACCAAATCTTAATTTTTGGAGCACAGAACAGATTCAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CAA 72 bp | CTGAATCTGTTCTGTGCTCCAAAAATTAAGATTTGGTaGTCCATTGACTGGCATGCTAGCCATTTCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LNLFCAPKIKIW*SIDWHASHFPF Trigger: AAATGGGAAATGGCTAGCATGCCAGTCAATGGACAACCAAATCTTAATTTTTGGAGCACAGAACAGATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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| CDS CCA 72 bp | TTTGGCCACATCTTTTTCATCCACATATTTTGCCCATaGTCCCAAGAAACCATCAATATTAGATGCATCATT | + |
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Preference number: 6 (lower is better) Translates to: FGHIFFIHIFCP*SQETINIRCII Trigger: AATGATGCATCTAATATTGATGGTTTCTTGGGACCATGGGCAAAATATGTGGATGAAAAAGATGTGGCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044166.9 |
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