Pregenerated sensors for CDC34B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020870Ensembl transcript IDs: ENSMUST00000021240.7, ENSMUST00000188741.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTaGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KAERRLWCWPSLGLG*SLCLPTRQSVPSLP Trigger: TGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR TCA 90 bp | AGAGGACCTAAGGATTATAGGATAGGAGCCCACATGGAACCTCGGTaGGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RGPKDYRIGAHMEPR*GSLSPEAHTGPAEV Trigger: TACCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCTATCCTATAATCCTTAGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCGTGGGGTGTCTGCCCTaGACCACAGCTCTTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LESLSPHQAVGPQPPRLVVGCLP*TTALLQ Trigger: TTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCAC...GACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTGGAGTCTCTGTCTTCATCATCTGAAAGCTaGGTGGGGTGTCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: REETLVLALPWAGLESLSSSSES*VGCLPC Trigger: GCAGGGCAGACACCCCACTCAGCTTTCAGATGATGA...AGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR-3UTR TCA 90 bp | CACACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTCATCATCTGAAAGCTaGGTGGGGTGTCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: HTLKAERRLWCWPSLGLGSSSES*VGCLPC Trigger: GCAGGGCAGACACCCCACTCAGCTTTCAGATGATGA...GCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR CCA 72 bp | AGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTaGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RRLWCWPSLGLG*SLCLPTRQSVP Trigger: GGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR TCA 72 bp | GCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTaGAAGCTGAGTGGGGTGTCTGCCCTGCACCACAGC | + |
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Preference number: 3 (lower is better) Translates to: AVGPQPPRLVII*KLSGVSALHHS Trigger: GCTGTGGTGCAGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR CCA 72 bp | AAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTaGGCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KSREETLVLALP*AGLESLSPHQA Trigger: TGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR TCA 72 bp | GTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTaGGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: VPSLPGLSSSES*VGCLPCTTALL Trigger: GAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR CCA 72 bp | TCACACACACTAAAAGCAGAGAGGAGACTCTGGTGCTaGCCCTCCCTTGGGCTGGGCTGGAGTCTCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SHTLKAERRLWC*PSLGLGWSLCL Trigger: GAGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR TCA 72 bp | AAGGATTATAGGATAGGAGCCCACATGGAACCTCGGTaGGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: KDYRIGAHMEPR*GSLSPEAHTGP Trigger: AGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCTATCCTATAATCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR GCA 72 bp | ATTTCACACACACTAAAAGCAGAGAGGAGACTCTGGTaGTGGCCCTCCCTTGGGCTGGGCTGGAGTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: ISHTLKAERRLW*WPSLGLGWSLC Trigger: ACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| 3UTR CCA 72 bp | TTTATTTCACACACACTAAAAGCAGAGAGGAGACTCTaGTGCTGGCCCTCCCTTGGGCTGGGCTGGAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: FISHTLKAERRL*CWPSLGLGWSL Trigger: GAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGGCTCTGCGTCCACCTTaGTCCCCAGGACCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGLESLSPHQAVGPQPPRALRPP*SPGPAS Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGC...CCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCACGCCATCGCGCTCTaGGTCCACCTTGGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGVSVSPPGSRSPASQACHAIAL*VHLGPQ Trigger: CTGGGGACCAAGGTGGACGCAGAGCGCGATGGCGTG...ACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | AGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTGGAGTCTCTGTCTCCCCCCGAGGCGTCCACGTTaGCAGGAGAGGAGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RRLWCWPSLGLGWSLCLPPRRPR*QERRCW Trigger: CCAACACCTCCTCTCCTGCCAACGTGGACGCCTCGG...GGGGAGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCACCGAGGCGTCCACGTTaGCAGGAGAGGAGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WSLCLPTRQSVPSLPGLSPRRPR*QERRCW Trigger: CCAACACCTCCTCTCCTGCCAACGTGGACGCCTCGG...TGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGGCTCTGCGTCCACCTTaGTCCCCAGGACCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WNLGEVVCRLRPTRVLLRALRPP*SPGPAS Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGC...CCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
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Preference number: 4 (lower is better) Translates to: RSPASQACHHLKAEWGVCPAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCGG...GCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTGCACCGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
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Preference number: 4 (lower is better) Translates to: PASQACHHLKAEWGVCPAPAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCGG...TGCAGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAACGAACCCTGTCTCATaGATGTTTGGGTGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: GLGWSLCLPTRQSVPSLPTNPVS*MFGCHI Trigger: GATGTGGCACCCAAACATCCATGAGACAGGGTTCGT...TGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCTGTCTCATGGATGTTTaGGTGCCACATCTTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: WAGLESLSPHQAVGPQPPCLMDV*VPHLGE Trigger: CTCACCAAGATGTGGCACCCAAACATCCATGAGACA...GGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCCGTGGTCCTTCCCCTTaGTCTCCTTCCATTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ESLSPHQAVGPQPPRLVIRGPSP*SPSIFC Trigger: ACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACG...GATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR GCA 90 bp | TGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGCGTGGTCCTTCCCCTTaGTCTCCTTCCATTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: WNLGEVVCRLRPTRVLLRRGPSP*SPSIFC Trigger: ACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACG...CCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | CATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCAAAGCACCTTCTGTGAGCTaGGCACCAGCGGTCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HHLKAEWGVCPAPQLFSKAPSVS*APAVRP Trigger: TGGCCGGACCGCTGGTGCCCAGCTCACAGAAGGTGC...TTTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTCAGCTTTCAGATGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGCTGTGGGTTGTCATCTaGGGGATGGAGAATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: WNLGEVVCRLRPTRVLLRLWVVI*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGATGACAACCCACAG...CCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTGCAGGTGCCACATCTTGGTaGGGAACCAGAAGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PASQACHHLKAEWGVCPAGATSW*GTRRLV Trigger: CACCAACCTTCTGGTTCCTCACCAAGATGTGGCACC...TGCAGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTGGAGTCTCTGTCTCTGTGGGTTGTCATCTaGGGGATGGAGAATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: REETLVLALPWAGLESLSLWVVI*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGATGACAACCCACAG...AGACAGAGACTCCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTATGTCCGTGTACTCGTaGTCCTTCCCCTTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPASQACHHLKAEWGVCPMSVYS*SFPLLS Trigger: GGAGAGCAAGGGGAAGGACCACGAGTACACGGACAT...AGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR GCA 90 bp | GGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTCCACCGGCTCCTCCTaGAGCCCCTTCAGTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSLSPEAHTGPAEVKFVSSTGSS*SPFSSS Trigger: ACTGGAACTGAAGGGGCTGCAGGAGGAGCCGGTGGA...ACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | ACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTGGGAACCAGAAGGTTGGTaGGGAATACGGGTAGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: TLKAERRLWCWPSLGLGWEPEGW*GIRVVD Trigger: ATCGACTACCCGTATTCCCCACCAACCTTCTGGTTC...CCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | GTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATTGTCTCATGGATGTTTaGGTGCCACATCTTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSVSPPGSRSPASQACHHCLMDV*VPHLGE Trigger: CTCACCAAGATGTGGCACCCAAACATCCATGAGACA...ATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAACCCCAACGAACCCTGTCTCATaGATGTTTGGGTGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: EWGVCPAPQLFSKAEETPTNPVS*MFGCHI Trigger: GATGTGGCACCCAAACATCCATGAGACAGGGTTCGT...TGGGGTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | ACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTGGTTGTCATCTGGGGGATaGAGAATGGAGATGCACACG | + |
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Preference number: 4 (lower is better) Translates to: TLKAERRLWCWPSLGLGWLSSGG*RMEMHT Trigger: CGTGTGCATCTCCATTCTCCATCCCCCAGATGACAA...CCAGCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGAGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAATGTCCGTGTACTCGTaGTCCTTCCCCTTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLSGVSALHHSSSPKPRKMSVYS*SFPLLS Trigger: GGAGAGCAAGGGGAAGGACCACGAGTACACGGACAT...TTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR GCA 90 bp | TATTTCACACACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGTCCACCGGCTCCTCCTaGAGCCCCTTCAGTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: YFTHTKSREETLVLALPWSTGSS*SPFSSS Trigger: ACTGGAACTGAAGGGGCTGCAGGAGGAGCCGGTGGA...CCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGAGCACCTTCTGTGAGCTaGGCACCAGCGGTCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PEAHTGPAEVKFVSLFQGAPSVS*APAVRP Trigger: TGGCCGGACCGCTGGTGCCCAGCTCACAGAAGGTGC...TCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTGAACCAGAAGGTTGGTaGGGAATACGGGTAGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SPASQACHHLKAEWGVCPEPEGW*GIRVVD Trigger: ATCGACTACCCGTATTCCCCACCAACCTTCTGGTTC...AGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTTTGTCATCTGGGGGATaGAGAATGGAGATGCACACG | + |
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Preference number: 4 (lower is better) Translates to: SPASQACHHLKAEWGVCPLSSGG*RMEMHT Trigger: CGTGTGCATCTCCATTCTCCATCCCCCAGATGACAA...AGGGCAGACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TGTCATCATCTGAAAGCTGAGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCCAGGAGAGGAGGTGTTaGGCTCATTCAGCAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: CHHLKAEWGVCPAPQLFSQERRC*AHSAAR Trigger: TCTCGCTGCTGAATGAGCCCAACACCTCCTCTCCTG...GGAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTCAGCTTTCAGATGATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR TCA 90 bp | GGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTGGTGCCACATCTTGGTaGGGAACCAGAAGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GSLSPEAHTGPAEVKFVSGATSW*GTRRLV Trigger: CACCAACCTTCTGGTTCCTCACCAAGATGTGGCACC...ACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTGAGGAACCAGAAGGTTaGTGGGGAATACGGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: GSLSPEAHTGPAEVKFVSEEPEG*WGIRVV Trigger: GACTACCCGTATTCCCCACCAACCTTCTGGTTCCTC...ACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CCA 90 bp | TTTTATTTCACACACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTCAGGAGAGGAGGTGTTaGGCTCATTCAGCAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: FYFTHTKSREETLVLALPQERRC*AHSAAR Trigger: TCTCGCTGCTGAATGAGCCCAACACCTCCTCTCCTG...AGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGAAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | GCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCGCTCTGCGTCCACCTaGGTCCCCAGGACCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGLESLSPHQAVGPQPPRRSAST*VPRTCF Trigger: GAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCG...CCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCTCCGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
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Preference number: 5 (lower is better) Translates to: LESLSPHQAVGPQPPRLVSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCGGA...GACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCCGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
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Preference number: 5 (lower is better) Translates to: WSLCLPTRQSVPSLPGLSSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCGGA...TGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 90 bp | GCAGTACTCGGCCAGCGTAGTGGGCACCTTCACGCCATCGCGCTCTaGGTCCACCTTGGTCCCCAGGACCTGCTTCCGGATGATGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: AVLGQRSGHLHAIAL*VHLGPQDLLPDDVR Trigger: ACGGACATCATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCGCGATGGCGTGAAGGTGCCCACTACGCTGGCCGAGTACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCGCTCTGCGTCCACCTaGGTCCCCAGGACCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VSVSPPGSRSPASQACHHRSAST*VPRTCF Trigger: GAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCG...ATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | CCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGTCCCCACCCTGTGGGTaGTCATCTGGGGGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PTWNLGEVVCRLRPTRVLSPPCG*SSGGWR Trigger: TCTCCATCCCCCAGATGACAACCCACAGGGTGGGGA...CAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTGGGCTGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCTTTGGGTGCCACATCTaGGTGAGGAACCAGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: WAGLESLSPHQAVGPQPPFGCHI*VRNQKV Trigger: AACCTTCTGGTTCCTCACCAAGATGTGGCACCCAAA...GGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCAGCCCAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | GTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAACCCCATGACCGAGGCGTCCACGTaGGCAGGAGAGGAGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VGCLPCTTALLQSRGNPMTEAST*AGEEVL Trigger: CAACACCTCCTCTCCTGCCAACGTGGACGCCTCGGT...CATGGGGTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | CACACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTGGGCTCCCCACCCTGTGGGTaGTCATCTGGGGGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HTLKAERRLWCWPSLGLGSPPCG*SSGGWR Trigger: TCTCCATCCCCCAGATGACAACCCACAGGGTGGGGA...GCCCAGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CCA 90 bp | CGCTCTGAGGGCAGCTCCCCACCCTGTGGGTTGTCATCTGGGGGATaGAGAATGGAGATGCACACGAACCCTGTCTCATGGATGTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RSEGSSPPCGLSSGG*RMEMHTNPVSWMFG Trigger: CCCAAACATCCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCATCCCCCAGATGACAACCCACAGGGTGGGGAGCTGCCCTCAGAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTCTGTCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATTTGGGTGCCACATCTaGGTGAGGAACCAGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: WSLCLPTRQSVPSLPGLSFGCHI*VRNQKV Trigger: AACCTTCTGGTTCCTCACCAAGATGTGGCACCCAAA...TGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGACAGAGACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 90 bp | GCTCCCCACCCTGTGGGTTGTCATCTGGGGGATGGAGAATGGAGATaGACACGAACCCTGTCTCATGGATGTTTGGGTGCCACATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: APHPVGCHLGDGEWR*TRTLSHGCLGATSW Trigger: CCAAGATGTGGCACCCAAACATCCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCATCCCCCAGATGACAACCCACAGGGTGGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | CATCTGAAAGCTGAGTGGGGTGTCTGCCCTGCACCACAGCTCTTCTCCAAAGCCTCGTGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: HLKAEWGVCPAPQLFSKASWSFP*LSFHFL Trigger: CAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACGA...GGCTTTGGAGAAGAGCTGTGGTGCAGGGCAGACACCCCACTCAGCTTTCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS-3UTR CAA 90 bp | TTCACACACACTAAAAGCAGAGAGGAGACTCTGGTGCTGGCCCTCCCTTGGGCTTCGTGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: FTHTKSREETLVLALPWASWSFP*LSFHFL Trigger: CAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACGA...AGCCCAAGGGAGGGCCAGCACCAGAGTCTCCTCTCTGCTTTTAGTGTGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 90 bp | TGGAGAATGGAGATGCACACGAACCCTGTCTCATGGATGTTTGGGTaGCACATCTTGGTGAGGAACCAGAAGGTTGGTGGGGAATACGGG | + |
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Preference number: 5 (lower is better) Translates to: WRMEMHTNPVSWMFG*HILVRNQKVGGEYG Trigger: CCCGTATTCCCCACCAACCTTCTGGTTCCTCACCAAGATGTGGCACCCAAACATCCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CAA 72 bp | TCGAAGAGGTCCGAGCCCTCATCCGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCGGCCAGCGTAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SKRSEPSSGAGA*VFTQYSASVVG Trigger: GCCCACTACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCGGATGAGGGCTCGGACCTCTTCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 72 bp | GGCCAGCGTAGTGGGCACCTTCACGCCATCGCGCTCTaGGTCCACCTTGGTCCCCAGGACCTGCTTCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: GQRSGHLHAIAL*VHLGPQDLLPD Trigger: ATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCGCGATGGCGTGAAGGTGCCCACTACGCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CAA 72 bp | GTGGGCACCTTCACGCCATCGCGCTCTGCGTCCACCTaGGTCCCCAGGACCTGCTTCCGGATGATGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VGTFTPSRSAST*VPRTCFRMMSV Trigger: CACGGACATCATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCGCGATGGCGTGAAGGTGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CAA 90 bp | GCCAGCGTAGTGGGCACCTTCACGCCATCGCGCTCTGCGTCCACCTaGGTCCCCAGGACCTGCTTCCGGATGATGTCCGTGTACTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASVVGTFTPSRSAST*VPRTCFRMMSVYSW Trigger: CCACGAGTACACGGACATCATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCAGAGCGCGATGGCGTGAAGGTGCCCACTACGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CCA 72 bp | GGCAGCTCCCCACCCTGTGGGTTGTCATCTGGGGGATaGAGAATGGAGATGCACACGAACCCTGTCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: GSSPPCGLSSGG*RMEMHTNPVSW Trigger: CCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCATCCCCCAGATGACAACCCACAGGGTGGGGAGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CAA 90 bp | AGGACCTGCTTCCGGATGATGTCCGTGTACTCGTGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCGTCCACGTTG | + |
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Preference number: 6 (lower is better) Translates to: RTCFRMMSVYSWSFP*LSFHFLYITEASTL Trigger: CAACGTGGACGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACGAGTACACGGACATCATCCGGAAGCAGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 72 bp | CCTGTGGGTTGTCATCTGGGGGATGGAGAATGGAGATaGACACGAACCCTGTCTCATGGATGTTTGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PVGCHLGDGEWR*TRTLSHGCLGA Trigger: GGCACCCAAACATCCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCATCCCCCAGATGACAACCCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CCA 72 bp | CCCCACCCTGTGGGTTGTCATCTGGGGGATGGAGAATaGAGATGCACACGAACCCTGTCTCATGGATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PHPVGCHLGDGE*RCTRTLSHGCL Trigger: CAAACATCCATGAGACAGGGTTCGTGTGCATCTCCATTCTCCATCCCCCAGATGACAACCCACAGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CCA 72 bp | CCCAGGACCTGCTTCCGGATGATGTCCGTGTACTCGTaGTCCTTCCCCTTGCTCTCCTTCCATTTTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: PRTCFRMMSVYS*SFPLLSFHFLY Trigger: GTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACGAGTACACGGACATCATCCGGAAGCAGGTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS GCA 72 bp | GAGATGCACACGAACCCTGTCTCATGGATGTTTGGGTaGCACATCTTGGTGAGGAACCAGAAGGTTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EMHTNPVSWMFG*HILVRNQKVGG Trigger: CCCACCAACCTTCTGGTTCCTCACCAAGATGTGGCACCCAAACATCCATGAGACAGGGTTCGTGTGCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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| CDS CAA 72 bp | TTCCGGATGATGTCCGTGTACTCGTGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: FRMMSVYSWSFP*LSFHFLYITEA Trigger: CGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCACGAGTACACGGACATCATCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021240.7 ENSMUST00000188741.2 |
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