Pregenerated sensors for CDC34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020307Ensembl transcript IDs: ENSMUST00000020550.13, ENSMUST00000166603.2, ENSMUST00000218938.2, ENSMUST00000218964.2, ENSMUST00000219389.2, ENSMUST00000219791.2, ENSMUST00000219930.2, ENSMUST00000220328.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAGGAGACTGTGGTGCTGGCCTTCCTTGGGCTGGGCTGGAGTCTCTaGCTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCA | + |
Preference number: 1 (lower is better) Translates to: EETVVLAFLGLGWSL*LPTRQSVPSLPGLS Trigger: TGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCACAGTCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR CCA 90 bp | CACACACACCAAAAGCAGAGAGGAGACTGTGGTGCTGGCCTTCCTTaGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCC | + |
Preference number: 1 (lower is better) Translates to: HTHQKQRGDCGAGLP*AGLESLAPHQAVGP Trigger: GGGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCACAGTCTCCTCTCTGCTTTTGGTGTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR TCA 90 bp | AGAGGACCTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTaGGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGCTGAGGTA | + |
Preference number: 1 (lower is better) Translates to: RGPKDHGMGAHMEPR*GSLSPEAHTGPAEV Trigger: TACCTCAGCAGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAGGTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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3UTR CCA 90 bp | AGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTaGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAA | + |
Preference number: 1 (lower is better) Translates to: SRSPASQACHHLKAE*GVCPAPQLFSKAEE Trigger: TTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR GCA 90 bp | AAAATTTGTAAGTTTATTTCAGGGACGTGGGTCAGGACTCTTCGGTaGCAGAGTCATCCTCTTCATCCCCAAAGCAGCTGTCGGCCTCCT | + |
Preference number: 1 (lower is better) Translates to: KICKFISGTWVRTLR*QSHPLHPQSSCRPP Trigger: AGGAGGCCGACAGCTGCTTTGGGGATGAAGAGGATGACTCTGGCACCGAAGAGTCCTGACCCACGTCCCTGAAATAAACTTACAAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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3UTR-3UTR CCA 90 bp | CTTCGGTGCCAGAGTCATCCTCTTCATCCCCAAAGCAGCTGTCGGCCTCCTCCACGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
Preference number: 2 (lower is better) Translates to: LRCQSHPLHPQSSCRPPPRAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...TGGAGGAGGCCGACAGCTGCTTTGGGGATGAAGAGGATGACTCTGGCACCGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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3UTR-3UTR CCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCTTCCTTGGGCTGGGCTaGAGTCTCTGGCTCCCCACC | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCFLGLG*SLWLPT Trigger: GGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAA...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR CCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCGGTGCTGGCCTTCCTTaGGCTGGGCTGGAGTCTCTG | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCGAGLP*AGLESL Trigger: CAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACC...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR GCA 90 bp | CTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCGTGGGGTGTTTGCCCTaGACCACAGCTCTTCTCCAA | + |
Preference number: 2 (lower is better) Translates to: LPTRQSVPSLPGLSSSESVGCLP*TTALLQ Trigger: TTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCAC...GCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR GCA 90 bp | CCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGCTGAGTGGGGTGTTTaGCCTGCACCACAGCTCTTC | + |
Preference number: 2 (lower is better) Translates to: PGSRSPASQACHHLKAEWAEWGV*PAPQLF Trigger: GAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAGC...CCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR GCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCGAGAGGAGACTGTGGTaGTGGCCTTCCTTGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCERRLW*WPSLGW Trigger: CCAGCCCAAGGAAGGCCAGCACCACAGTCTCCTCTC...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR GCA 90 bp | TCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGTGGGGTGTTTGCCCTaGACCACAGCTCTTCTCCAA | + |
Preference number: 2 (lower is better) Translates to: SPPGSRSPASQACHHLKAVGCLP*TTALLQ Trigger: TTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCAC...AGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR GCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCGCTGAGTGGGGTGTTTaGCCTGCACCACAGCTCTTC | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCAEWGV*PAPQLF Trigger: GAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAGC...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR CCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCGGATGGGAGCCCACATaGAACCTCGGTGAGGTAGTC | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCGWEPT*NLGEVV Trigger: GACTACCTCACCGAGGTTCCATGTGGGCTCCCATCC...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR CCA 90 bp | CTGAGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCGGATGGGAGCCCACATaGAACCTCGGTGAGGTAGTC | + |
Preference number: 2 (lower is better) Translates to: LSGVFALHHSSSPKPRKTGWEPT*NLGEVV Trigger: GACTACCTCACCGAGGTTCCATGTGGGCTCCCATCC...GGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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3UTR-3UTR TCA 90 bp | CGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGTTTGCTCATCATCTGAAAGCTaGGTGGGGTGTTTGCCCTGC | + |
Preference number: 2 (lower is better) Translates to: RSPASQACHHLKAEWGVCSSSES*VGCLPC Trigger: GCAGGGCAAACACCCCACTCAGCTTTCAGATGATGA...GCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR CCA 72 bp | GCAGAGAGGAGACTGTGGTGCTGGCCTTCCTTGGGCTaGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGG | + |
Preference number: 3 (lower is better) Translates to: AERRLWCWPSLG*AGVSGSPPGSR Trigger: CCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCACAGTCTCCTCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR-3UTR CAA 90 bp | ACCCATGGGGAATACGGGGTAAGAGGACCTAAGGATCATGGGATGGGAGCCCACTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
Preference number: 3 (lower is better) Translates to: THGEYGVRGPKDHGMGAHSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GTGGGCTCCCATCCCATGATCCTTAGGTCCTCTTACCCCGTATTCCCCATGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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3UTR TCA 72 bp | AAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTaGGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCT | + |
Preference number: 3 (lower is better) Translates to: KDHGMGAHMEPR*GSLSPEAHTGP Trigger: AGGACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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3UTR TCA 72 bp | GCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTaGAAGCTGAGTGGGGTGTTTGCCCTGCACCACAGC | + |
Preference number: 3 (lower is better) Translates to: AVGPQPPRLVII*KLSGVFALHHS Trigger: GCTGTGGTGCAGGGCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR TCA 72 bp | GTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTaGGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTC | + |
Preference number: 3 (lower is better) Translates to: VPSLPGLSSSES*VGCLPCTTALL Trigger: GAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR GCA 72 bp | ATTTCACACACACCAAAAGCAGAGAGGAGACTGTGGTaGTGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGC | + |
Preference number: 3 (lower is better) Translates to: ISHTPKAERRLW*WPSLGWAGVSG Trigger: GCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCACAGTCTCCTCTCTGCTTTTGGTGTGTGTGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR CCA 72 bp | CCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTaGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAA | + |
Preference number: 3 (lower is better) Translates to: PASQACHHLKAE*GVCPAPQLFSK Trigger: TTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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3UTR GCA 72 bp | AAGTTTATTTCAGGGACGTGGGTCAGGACTCTTCGGTaGCAGAGTCATCCTCTTCATCCCCAAAGCAGCTGT | + |
Preference number: 3 (lower is better) Translates to: KFISGTWVRTLR*QSHPLHPQSSC Trigger: ACAGCTGCTTTGGGGATGAAGAGGATGACTCTGGCACCGAAGAGTCCTGACCCACGTCCCTGAAATAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | GAAGAGGTCCGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCGGAT | + |
Preference number: 4 (lower is better) Translates to: EEVRALVGRRRLGLHAVLAPRPP*SPGPAD Trigger: ATCCGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...GAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCGGACCTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | GAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
Preference number: 4 (lower is better) Translates to: EPTWNLGEVVCRLRPTRVRAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...GACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR TCA 90 bp | GTGGTGCTGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGGGTGCCACATCTTGGTaGGGAACCGGAAGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: VVLAFLGLGWSLWLPTRQGATSW*GTGRLV Trigger: CACCAGCCTTCCGGTTCCTCACCAAGATGTGGCACC...CTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | TCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCCCAGCCGAGGAACCGGAAGGCTaGTGGGGAATACGGGTAGTC | + |
Preference number: 4 (lower is better) Translates to: SLGWAGVSGSPPGSRSPAEEPEG*WGIRVV Trigger: GACTACCCGTATTCCCCACCAGCCTTCCGGTTCCTC...GGCTGGGGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | ATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
Preference number: 4 (lower is better) Translates to: MGWEPTWNLGEVVCRLRPRAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...GGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | TCCGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCCGCGGTCCTTCCCCTTaGTCTCCTTCCATTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: SEPSSGAGALVFTQYSASRGPSP*SPSIFC Trigger: ACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCG...GCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | CCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGCGCCTTCTGCGAGCTTaGCACCAGCGGCCGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: PGSRSPASQACHHLKAEWRLLRA*HQRPGH Trigger: ATGGCCCGGCCGCTGGTGCCAAGCTCGCAGAAGGCG...CCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS-3UTR CCA 90 bp | TGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCGAGGAACCGGAAGGCTaGTGGGGAATACGGGTAGTC | + |
Preference number: 4 (lower is better) Translates to: WPSLGWAGVSGSPPGSRSEEPEG*WGIRVV Trigger: GACTACCCGTATTCCCCACCAGCCTTCCGGTTCCTC...GGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR GCA 90 bp | TCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTAGCAGCAGCGCCTTCTaGGAGCTTGGCACCAGCGGC | + |
Preference number: 4 (lower is better) Translates to: SPPGSRSPASQACHHLKASSSAF*ELGTSG Trigger: GCCGCTGGTGCCAAGCTCGCAGAAGGCGCTGCTGCT...AGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS-3UTR GCA 90 bp | GGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACATCCACCGGCTCCTCCTaGAGCCCCTTCAGTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: GWEPTWNLGEVVCRLRPTSTGSS*SPFSSS Trigger: GCTGGAACTGAAGGGGCTGCAGGAGGAGCCGGTGGA...TGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | CCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCCCAGCCTCGCGGTCCTTCCCCTTaGTCTCCTTCCATTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: PWAGLESLAPHQAVGPQPRGPSP*SPSIFC Trigger: ACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCG...AGGCTGGGGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | TGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCGAACCGGAAGGCTGGTaGGGAATACGGGTAGTCGAT | + |
Preference number: 4 (lower is better) Translates to: WPSLGWAGVSGSPPGSRSEPEGW*GIRVVD Trigger: ATCGACTACCCGTATTCCCCACCAGCCTTCCGGTTC...GGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | CTTCGCCGTCCTCATAGTAGTCGTCGTAGAAGAGGTCCGAGCCCTCGTCGGGCGCCGAGGCGTCCACGTTaGCAGGCGAGAAGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: LRRPHSSRRRRGPSPRRAPRRPR*QARRCW Trigger: CCAACACCTTCTCGCCTGCCAACGTGGACGCCTCGG...CGCCCGACGAGGGCTCGGACCTCTTCTACGACGACTACTATGAGGACGGCGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | GGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: GSRSPASQACHHLKAEWGAPRPP*SPGPAS Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...ACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS-3UTR CCA 90 bp | CCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: PGSRSPASQACHHLKAEWAPRPP*SPGPAS Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...CCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS-3UTR GCA 90 bp | GGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGGGTTCCACCGGCTCCTCCTaGAGCCCCTTCAGTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: GSRSPASQACHHLKAEWGSTGSS*SPFSSS Trigger: GCTGGAACTGAAGGGGCTGCAGGAGGAGCCGGTGGA...ACCCCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS-3UTR CCA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCGCCTTCTGCGAGCTTaGCACCAGCGGCCGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRRLLRA*HQRPGH Trigger: ATGGCCCGGCCGCTGGTGCCAAGCTCGCAGAAGGCG...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | CTGAGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCGCCTTCTGCGAGCTTaGCACCAGCGGCCGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: LSGVFALHHSSSPKPRKTRLLRA*HQRPGH Trigger: ATGGCCCGGCCGCTGGTGCCAAGCTCGCAGAAGGCG...GGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | TGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTCCCTGTGGGTCGTCAACTaGGGGATGGAGAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: WPSLGWAGVSGSPPGSRSLWVVN*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGTTGACGACCCACAG...GGACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR TCA 90 bp | CCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGGGTGCCACATCTTGGTaGGGAACCGGAAGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: PPGSRSPASQACHHLKAEGATSW*GTGRLV Trigger: CACCAGCCTTCCGGTTCCTCACCAAGATGTGGCACC...CTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR TCA 90 bp | CACTTCGCCGTCCTCATAGTAGTCGTCGTAGAAGAGGTCCGAGCCCTCGTCGGGGGTGCCACATCTTGGTaGGGAACCGGAAGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: HFAVLIVVVVEEVRALVGGATSW*GTGRLV Trigger: CACCAGCCTTCCGGTTCCTCACCAAGATGTGGCACC...CCCGACGAGGGCTCGGACCTCTTCTACGACGACTACTATGAGGACGGCGAAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS-3UTR GCA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCAGCAGCAGCGCCTTCTaGGAGCTTGGCACCAGCGGC | + |
Preference number: 4 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRSSSAF*ELGTSG Trigger: GCCGCTGGTGCCAAGCTCGCAGAAGGCGCTGCTGCT...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | TGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGGAGCAGCAGCGCCTTCTaGGAGCTTGGCACCAGCGGC | + |
Preference number: 4 (lower is better) Translates to: WGVCPAPQLFSKAEENPWSSSAF*ELGTSG Trigger: GCCGCTGGTGCCAAGCTCGCAGAAGGCGCTGCTGCT...CCATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | GCTGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTCGGTGATGGAGAATGGAGATaGACACGTCCCCTGTCTCAT | + |
Preference number: 4 (lower is better) Translates to: AGLPWAGLESLAPHQAVGDGEWR*TRPLSH Trigger: ATGAGACAGGGGACGTGTGCATCTCCATTCTCCATC...ACCGACTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR TCA 90 bp | GGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGGGGGGTGCCACATCTTGGTaGGGAACCGGAAGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: GCLPCTTALLQSRGKPMGGATSW*GTGRLV Trigger: CACCAGCCTTCCGGTTCCTCACCAAGATGTGGCACC...CCCCATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCCTGTGGGTCGTCAACTaGGGGATGGAGAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: EPTWNLGEVVCRLRPTRVLWVVN*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGTTGACGACCCACAG...GACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCCGAGGCGTCCACGTTaGCAGGCGAGAAGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRPRRPR*QARRCW Trigger: CCAACACCTTCTCGCCTGCCAACGTGGACGCCTCGG...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CCA 90 bp | GTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGCCGAGGCGTCCACGTTaGCAGGCGAGAAGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: VGCLPCTTALLQSRGKPMPRRPR*QARRCW Trigger: CCAACACCTTCTCGCCTGCCAACGTGGACGCCTCGG...CATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR TCA 90 bp | GGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGGGGCCAGGACCTGCTTCCTaGCATTCTGTGTGGGGTTCC | + |
Preference number: 4 (lower is better) Translates to: GCLPCTTALLQSRGKPMGPGPAS*HSVWGS Trigger: GGAACCCCACACAGAATGTCAGGAAGCAGGTCCTGG...CCCCATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | CCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGCGCGGTCCTTCCCCTTaGTCTCCTTCCATTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: PGSRSPASQACHHLKAEWRGPSP*SPSIFC Trigger: ACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCG...CCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR GCA 90 bp | GGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGGGGTTGGTCCCCAGGACCTaGTTCCTGACATTCTGTGTG | + |
Preference number: 4 (lower is better) Translates to: GCLPCTTALLQSRGKPMGLVPRT*FLTFCV Trigger: CACACAGAATGTCAGGAAGCAGGTCCTGGGGACCAA...CCCCATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | ACCCATGGGGAATACGGGGTAAGAGGACCTAAGGATCATGGGATGGGAGCCCACGAACCGGAAGGCTGGTaGGGAATACGGGTAGTCGAT | + |
Preference number: 4 (lower is better) Translates to: THGEYGVRGPKDHGMGAHEPEGW*GIRVVD Trigger: ATCGACTACCCGTATTCCCCACCAGCCTTCCGGTTC...GTGGGCTCCCATCCCATGATCCTTAGGTCCTCTTACCCCGTATTCCCCATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACACGGGTCTGTCTCATAGATGTTTaGGTGCCACATCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: EPTWNLGEVVCRLRPTRVCLIDV*VPHLGE Trigger: CTCACCAAGATGTGGCACCCAAACATCTATGAGACA...GACCCGTGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGGGGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: AHTGPAEVKFVSLFQGRGAPRPP*SPGPAS Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...CCCACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG | + |
Preference number: 4 (lower is better) Translates to: EAHTGPAEVKFVSLFQGRRAPAP*SSRSTR Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...ACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 ENSMUST00000220328.2 |
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CDS-3UTR CCA 90 bp | GGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCACATGTCTCATAGATGTTTaGGTGCCACATCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: GWEPTWNLGEVVCRLRPTCLIDV*VPHLGE Trigger: CTCACCAAGATGTGGCACCCAAACATCTATGAGACA...TGTGGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGTGGGTCGTCAACTaGGGGATGGAGAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRLWVVN*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGTTGACGACCCACAG...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR GCA 90 bp | ACCCATGGGGAATACGGGGTAAGAGGACCTAAGGATCATGGGATGGGAGCCCACGATGGAGAATGGAGATaGACACGTCCCCTGTCTCAT | + |
Preference number: 4 (lower is better) Translates to: THGEYGVRGPKDHGMGAHDGEWR*TRPLSH Trigger: ATGAGACAGGGGACGTGTGCATCTCCATTCTCCATC...GTGGGCTCCCATCCCATGATCCTTAGGTCCTCTTACCCCGTATTCCCCATGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGCTCCGCGTCCACGTTaGCAGGCGAGAAGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: EAHTGPAEVKFVSLFQGRAPRPR*QARRCW Trigger: CCAACACCTTCTCGCCTGCCAACGTGGACGCGGAGC...ACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220328.2 |
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CDS-3UTR GCA 90 bp | GACCTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTGATGGAGAATGGAGATaGACACGTCCCCTGTCTCAT | + |
Preference number: 4 (lower is better) Translates to: DLRIMGWEPTWNLGEVVCDGEWR*TRPLSH Trigger: ATGAGACAGGGGACGTGTGCATCTCCATTCTCCATC...ACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGAGGAACCGGAAGGCTaGTGGGGAATACGGGTAGTC | + |
Preference number: 4 (lower is better) Translates to: EAHTGPAEVKFVSLFQGREEPEG*WGIRVV Trigger: GACTACCCGTATTCCCCACCAGCCTTCCGGTTCCTC...ACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | ACCCATGGGGAATACGGGGTAAGAGGACCTAAGGATCATGGGATGGGAGCCCACTGTCTCATAGATGTTTaGGTGCCACATCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: THGEYGVRGPKDHGMGAHCLIDV*VPHLGE Trigger: CTCACCAAGATGTGGCACCCAAACATCTATGAGACA...GTGGGCTCCCATCCCATGATCCTTAGGTCCTCTTACCCCGTATTCCCCATGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CCA 90 bp | GCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGGGCTGTGGGTCGTCAACTaGGGGATGGAGAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: AHTGPAEVKFVSLFQGRGLWVVN*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGTTGACGACCCACAG...CCCACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 ENSMUST00000220328.2 |
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CDS-3UTR CCA 90 bp | GAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTCTGTGGGTCGTCAACTaGGGGATGGAGAATGGAGAT | + |
Preference number: 4 (lower is better) Translates to: EAHTGPAEVKFVSLFQGRLWVVN*GMENGD Trigger: ATCTCCATTCTCCATCCCCCAGTTGACGACCCACAG...ACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 ENSMUST00000220328.2 |
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CDS-3UTR GCA 90 bp | GAGGCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGATGGAGAATGGAGATaGACACGTCCCCTGTCTCAT | + |
Preference number: 4 (lower is better) Translates to: EAHTGPAEVKFVSLFQGRDGEWR*TRPLSH Trigger: ATGAGACAGGGGACGTGTGCATCTCCATTCTCCATC...ACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | GTGGTGCTGGCCTTCCTTGGGCTGGGCTGGAGTCTCTGGCTCCCCACCAGGCAGTTTGGGTGCCACATCTaGGTGAGGAACCGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: VVLAFLGLGWSLWLPTRQFGCHI*VRNRKA Trigger: AGCCTTCCGGTTCCTCACCAAGATGTGGCACCCAAA...CTGCCTGGTGGGGAGCCAGAGACTCCAGCCCAGCCCAAGGAAGGCCAGCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | CTCCCCACCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCACCGAGGCGTCCACGTaGGCAGGCGAGAAGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: LPTRQSVPSLPGLSSSESTEAST*AGEKVL Trigger: CAACACCTTCTCGCCTGCCAACGTGGACGCCTCGGT...GCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGGTGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | CTGAGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
Preference number: 5 (lower is better) Translates to: LSGVFALHHSSSPKPRKTSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
Preference number: 5 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | GACCTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
Preference number: 5 (lower is better) Translates to: DLRIMGWEPTWNLGEVVCSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...ACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | GTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGACCGAGGCGTCCACGTaGGCAGGCGAGAAGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: VGCLPCTTALLQSRGKPMTEAST*AGEKVL Trigger: CAACACCTTCTCGCCTGCCAACGTGGACGCCTCGGT...CATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | ATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCCTGAGGCCCTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTG | + |
Preference number: 5 (lower is better) Translates to: MGWEPTWNLGEVVCRLRPSRSFP*LSFHFL Trigger: CAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGA...GGGCCTCAGGCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | CCAGGCAGTCGGTCCCCAGCCTCCCAGGCTTGTCATCATCTGAAAGCTGAGTGGTTTGGGTGCCACATCTaGGTGAGGAACCGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: PGSRSPASQACHHLKAEWFGCHI*VRNRKA Trigger: AGCCTTCCGGTTCCTCACCAAGATGTGGCACCCAAA...CCACTCAGCTTTCAGATGATGACAAGCCTGGGAGGCTGGGGACCGACTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | GGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCCATGGGGTTTGGGTGCCACATCTaGGTGAGGAACCGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: GCLPCTTALLQSRGKPMGFGCHI*VRNRKA Trigger: AGCCTTCCGGTTCCTCACCAAGATGTGGCACCCAAA...CCCCATGGGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | GCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGGGTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG | + |
Preference number: 5 (lower is better) Translates to: AHTGPAEVKFVSLFQGRGSGAGA*VFTQYS Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...CCCACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000219791.2 ENSMUST00000220328.2 |
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CDS-3UTR CAA 90 bp | CTGAGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCTTTGGGTGCCACATCTaGGTGAGGAACCGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: LSGVFALHHSSSPKPRKTFGCHI*VRNRKA Trigger: AGCCTTCCGGTTCCTCACCAAGATGTGGCACCCAAA...GGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219791.2 |
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CDS-3UTR CAA 90 bp | GACCTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTGCAGGCGAGAAGGTGTaGGGCTCATTCAGCAGCGAA | + |
Preference number: 5 (lower is better) Translates to: DLRIMGWEPTWNLGEVVCAGEKV*GSFSSE Trigger: TTCGCTGCTGAATGAGCCCAACACCTTCTCGCCTGC...ACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | CTAAGGATCATGGGATGGGAGCCCACATGGAACCTCGGTGAGGTAGTCTGTCGCTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTG | + |
Preference number: 5 (lower is better) Translates to: LRIMGWEPTWNLGEVVCRSRSFP*LSFHFL Trigger: CAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGA...GCGACAGACTACCTCACCGAGGTTCCATGTGGGCTCCCATCCCATGATCCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | CTGAGTGGGGTGTTTGCCCTGCACCACAGCTCTTCTCCAAAGCCGAGGAAAACCTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTG | + |
Preference number: 5 (lower is better) Translates to: LSGVFALHHSSSPKPRKTSRSFP*LSFHFL Trigger: CAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGA...GGTTTTCCTCGGCTTTGGAGAAGAGCTGTGGTGCAGGGCAAACACCCCACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 |
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CDS-3UTR CAA 90 bp | GCCCACACGGGTCCTGCTGAGGTAAAATTTGTAAGTTTATTTCAGGGACGTGGGCGCTCCGCGTCCACGTaGGCAGGCGAGAAGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: AHTGPAEVKFVSLFQGRGRSAST*AGEKVL Trigger: CAACACCTTCTCGCCTGCCAACGTGGACGCGGAGCG...CCCACGTCCCTGAAATAAACTTACAAATTTTACCTCAGCAGGACCCGTGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220328.2 |
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CDS CAA 90 bp | GCCAGCGTAGTGGGCACCTTCACACCATCGCGCTCCGCGTCCACCTaGGTCCCCAGGACCTGCTTCCGGATGATGTCCGTGTACTCGCGG | + |
Preference number: 6 (lower is better) Translates to: ASVVGTFTPSRSAST*VPRTCFRMMSVYSR Trigger: CCGCGAGTACACGGACATCATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGCGCGATGGTGTGAAGGTGCCCACTACGCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS CCA 72 bp | TGGGCACCTTCACACCATCGCGCTCCGCGTCCACCTTaGTCCCCAGGACCGGATGATGTCCGTGTACTCGCG | + |
Preference number: 6 (lower is better) Translates to: WAPSHHRAPRPP*SPGPDDVRVLA Trigger: CGCGAGTACACGGACATCATCCGGTCCTGGGGACCAAGGTGGACGCGGAGCGCGATGGTGTGAAGGTGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218938.2 |
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CDS CAA 72 bp | GTGGGCACCTTCACACCATCGCGCTCCGCGTCCACCTaGGTCCCCAGGACCTGCTTCCGGATGATGTCCGTG | + |
Preference number: 6 (lower is better) Translates to: VGTFTPSRSAST*VPRTCFRMMSV Trigger: CACGGACATCATCCGGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGCGCGATGGTGTGAAGGTGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS CAA 72 bp | TCGCGCTCCGCGTCCACGTTGGCAGGCGAGAAGGTGTaGGGCTCATTCAGCAGCGAAATTACACTCAGGAGG | + |
Preference number: 6 (lower is better) Translates to: SRSASTLAGEKV*GSFSSEITLRR Trigger: CCTCCTGAGTGTAATTTCGCTGCTGAATGAGCCCAACACCTTCTCGCCTGCCAACGTGGACGCGGAGCGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220328.2 |
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CDS CAA 90 bp | AGGACCTGCTTCCGGATGATGTCCGTGTACTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCGTCCACGTTG | + |
Preference number: 6 (lower is better) Translates to: RTCFRMMSVYSRSFP*LSFHFLYITEASTL Trigger: CAACGTGGACGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGAGTACACGGACATCATCCGGAAGCAGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS CAA 72 bp | ATCACCGAGGCGTCCACGTTGGCAGGCGAGAAGGTGTaGGGCTCATTCAGCAGCGAAATTACACTCAGGAGG | + |
Preference number: 6 (lower is better) Translates to: ITEASTLAGEKV*GSFSSEITLRR Trigger: CCTCCTGAGTGTAATTTCGCTGCTGAATGAGCCCAACACCTTCTCGCCTGCCAACGTGGACGCCTCGGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219389.2 ENSMUST00000219930.2 |
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CDS CAA 72 bp | CTGCGGATGATGTCCGTGTACTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCG | + |
Preference number: 6 (lower is better) Translates to: LRMMSVYSRSFP*LSFHFLYITEA Trigger: CGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGAGTACACGGACATCATCCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218964.2 |
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CDS CAA 72 bp | GACCGGATGATGTCCGTGTACTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCG | + |
Preference number: 6 (lower is better) Translates to: DRMMSVYSRSFP*LSFHFLYITEA Trigger: CGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGAGTACACGGACATCATCCGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219930.2 |
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CDS GCA 72 bp | TCTGTGGGTCGTCAACTGGGGGATGGAGAATGGAGATaGACACGTCCCCTGTCTCATAGATGTTTGGGTGCC | + |
Preference number: 6 (lower is better) Translates to: SVGRQLGDGEWR*TRPLSHRCLGA Trigger: GGCACCCAAACATCTATGAGACAGGGGACGTGTGCATCTCCATTCTCCATCCCCCAGTTGACGACCCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219389.2 ENSMUST00000219791.2 ENSMUST00000219930.2 |
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CDS CAA 72 bp | TTCCGGATGATGTCCGTGTACTCGCGGTCCTTCCCCTaGCTCTCCTTCCATTTTCTGTACATCACCGAGGCG | + |
Preference number: 6 (lower is better) Translates to: FRMMSVYSRSFP*LSFHFLYITEA Trigger: CGCCTCGGTGATGTACAGAAAATGGAAGGAGAGCAAGGGGAAGGACCGCGAGTACACGGACATCATCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 |
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CDS CAA 90 bp | TTTCTGTACATCACCGAGGCGTCCACGTTGGCAGGCGAGAAGGTGTaGGGCTCATTCAGCAGCGAAATTACACTCAGGAGGATGGTTCTG | + |
Preference number: 6 (lower is better) Translates to: FLYITEASTLAGEKV*GSFSSEITLRRMVL Trigger: CAGAACCATCCTCCTGAGTGTAATTTCGCTGCTGAATGAGCCCAACACCTTCTCGCCTGCCAACGTGGACGCCTCGGTGATGTACAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020550.13 ENSMUST00000166603.2 ENSMUST00000218964.2 ENSMUST00000219389.2 ENSMUST00000219930.2 |