Pregenerated sensors for CDC27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020687Ensembl transcript IDs: ENSMUST00000093923.9, ENSMUST00000106961.2, ENSMUST00000106962.9
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGTaGCGAATGACGGCAATGGCGGCTCAAGAGTTGAGACTCAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: VYSQGPMKVAHSWSR*RMTAMAAQELRLSV Trigger: TACACTGAGTCTCAACTCTTGAGCCGCCATTGCCGTCATTCGTCACCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR TCA 90 bp | CAAGTTGCAGTGACTCACACTACTGACAATTACGAAGTAGAGAGCTaGAAGAACGGCACTCAACAGAGGTCACCATGCGTGCTTGCACTC | + |
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Preference number: 1 (lower is better) Translates to: QVAVTHTTDNYEVES*KNGTQQRSPCVLAL Trigger: GAGTGCAAGCACGCATGGTGACCTCTGTTGAGTGCCGTTCTTTCAGCTCTCTACTTCGTAATTGTCAGTAGTGTGAGTCACTGCAACTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR TCA 90 bp | CACACGGTTAGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATaGTCTCGAAGGTTTCTCTTTAGTGTTCTCATACTGACTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: HTVRDSSSCIKASLS*SRRFLFSVLILTLL Trigger: CAGAAGAGTCAGTATGAGAACACTAAAGAGAAACCTTCGAGATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCTAACCGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR TCA 90 bp | TATTTTAAAATGTTTCCCTGGCACCTAATACCTAACCCAAGACTTTaGCTTTATGATGGTCTGTGTCTAATTCACATCTGGATGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: YFKMFPWHLIPNPRL*LYDGLCLIHIWMRR Trigger: CCTTCTCATCCAGATGTGAATTAGACACAGACCATCATAAAGTCAAAGTCTTGGGTTAGGTATTAGGTGCCAGGGAAACATTTTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR TCA 90 bp | TTCTTCGAAAAGAGTGTTTTTAATGGACTAAACACTGGTGATCACTaGGTTATTAAGGTACAACAGCAGCATGGTTCAAATGTTACTTGC | + |
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Preference number: 1 (lower is better) Translates to: FFEKSVFNGLNTGDH*VIKVQQQHGSNVTC Trigger: GCAAGTAACATTTGAACCATGCTGCTGTTGTACCTTAATAACTCAGTGATCACCAGTGTTTAGTCCATTAAAAACACTCTTTTCGAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCAGCCAGTGCTCTTAACCGCTGAGCTGAGCCATCTCTCCAGGACTCTCCTTTCCTCCCCAGCTTaGTTCTGGTTGTGGTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: EEQPVLLTAELSHLSRTLLSSPA*FWLWCF Trigger: GAAACACCACAACCAGAAGCAAGCTGGGGAGGAAAG...GAGAGTCCTGGAGAGATGGCTCAGCTCAGCGGTTAAGAGCACTGGCTGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTGCTGTCTTCAGACACACCAGAAGAGGGCATCGGTGCATGAGTGCTGGGTCCCCAGCTTGCTTCTaGTTGTGGTGTTTCACCACA | + |
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Preference number: 2 (lower is better) Translates to: TLAVFRHTRRGHRCMSAGSPACF*LWCFTT Trigger: TGTGGTGAAACACCACAACCAGAAGCAAGCTGGGGA...CCCAGCACTCATGCACCGATGCCCTCTTCTGGTGTGTCTGAAGACAGCAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACACACGGTTAGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATGATTGGCGGCTCAAGAGTTaGGACTCAGTGTATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ADTRLGTAPAVLRLLYHDWRLKS*DSVYGG Trigger: CCCTCCATACACTGAGTCTCAACTCTTGAGCCGCCA...ATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTTGGCGGCTCAAGAGTTaGGACTCAGTGTATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ALANTILEDLEMKASYSVWRLKS*DSVYGG Trigger: CCCTCCATACACTGAGTCTCAACTCTTGAGCCGCCA...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGACACACGGTTAGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATGATGTATGGAGGGATATTTaGCTCCTCCGTATGAGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: ADTRLGTAPAVLRLLYHDVWRDI*LLRMSP Trigger: CGGACTCATACGGAGGAGTCAAATATCCCTCCATAC...ATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTACAGTCAGGGTCCAATaGAAGTGGCACACTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: ALANTILEDLEMKASYSVTVRVQ*KWHTHG Trigger: ACCATGAGTGTGCCACTTTCATTGGACCCTGACTGT...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTTTGAGACTCAGTGTATaGAGGGACAGGGACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: ALANTILEDLEMKASYSVLRLSV*RDRDMS Trigger: TGACATGTCCCTGTCCCTCCATACACTGAGTCTCAA...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCCTTATGTGTAGGTGTGACAAAGACAAGGAGGTACTTAGGATTCTTAAGACAGTCAGGGTCCAATaGAAGTGGCACACTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: CVLMCRCDKDKEVLRILKTVRVQ*KWHTHG Trigger: ACCATGAGTGTGCCACTTTCATTGGACCCTGACTGT...CTTAAGAATCCTAAGTACCTCCTTGTCTTTGTCACACCTACACATAAGGACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTATGACCAAGAAATTCTaGTTCATCACCATTTCCGTA | + |
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Preference number: 2 (lower is better) Translates to: ALANTILEDLEMKASYSVMTKKF*FITISV Trigger: TACGGAAATGGTGATGAACCAGAATTTCTTGGTCAT...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTTATGTTCCTTGGCAATaGACTTTACTCTGTTATAGG | + |
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Preference number: 2 (lower is better) Translates to: SVLWLIRDFETVFFEKSVYVPWQ*TLLCYR Trigger: CCTATAACAGAGTAAAGTTCATTGCCAAGGAACATA...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTAGAAGGTTAAGTAACTaGCAGAAAATGACTGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVLWLIRDFETVFFEKSVRRLSN*QKMTES Trigger: AGACTCAGTCATTTTCTGTCAGTTACTTAACCTTCT...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTATGTGTTTGTTTATCTaGTCCCTATTCTGTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVLWLIRDFETVFFEKSVMCLFI*SLFCGK Trigger: TTTCCCACAGAATAGGGATCAGATAAACAAACACAT...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTTTTAAAATGTTTCCCTaGCACCTAATACCTAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SVLWLIRDFETVFFEKSVFKMFP*HLIPNP Trigger: TGGGTTAGGTATTAGGTGCCAGGGAAACATTTTAAA...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTCACTTCAGTAAATTATaGTCTGAGCTTAGCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: SVLWLIRDFETVFFEKSVHFSKL*SELSIF Trigger: GAAAATGCTAAGCTCAGAGCATAATTTACTGAAGTG...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR CCA 90 bp | TGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTTTATGACCAAGAAATTCTaGTTCATCACCATTTCCGTA | + |
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Preference number: 2 (lower is better) Translates to: CTLANQRLRNCFLRKECFMTKKF*FITISV Trigger: TACGGAAATGGTGATGAACCAGAATTTCTTGGTCAT...AAAACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR GCA 72 bp | GCTGAAAGAACGGCACTCAACAGAGGTCACCATGCGTaGTTGCACTCCTGGGAGAGAGGCAGACACACGGTT | + |
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Preference number: 3 (lower is better) Translates to: AERTALNRGHHA*LHSWERGRHTV Trigger: AACCGTGTGTCTGCCTCTCTCCCAGGAGTGCAAGCACGCATGGTGACCTCTGTTGAGTGCCGTTCTTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGCAGCCAGTGCTCTTAACCGCTGAGCTGAGCCATCTCTCCAGGACTCTCCCAGCTTGCTTCTGGTaGTGGTGTTTCACCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: EEQPVLLTAELSHLSRTLPACFW*WCFTTA Trigger: TGCTGTGGTGAAACACCACAACCAGAAGCAAGCTGG...GAGAGTCCTGGAGAGATGGCTCAGCTCAGCGGTTAAGAGCACTGGCTGCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR GCA 72 bp | TGTGAGGAAACTGTGAAAGCAGGCCAAGTGTCTGAGTaGCTTCCAGCCAGCCACGCCACAACCATCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: CEETVKAGQVSE*LPASHATTIPY Trigger: ATAGGGGATGGTTGTGGCGTGGCTGGCTGGAAGGCACTCAGACACTTGGCCTGCTTTCACAGTTTCCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR CCA 72 bp | CAGACACACCAGAAGAGGGCATCGGTGCATGAGTGCTaGGAATTGAACTCAGGACCTCTAGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QTHQKRASVHEC*ELNSGPLEEQP Trigger: TGGCTGCTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCACTCATGCACCGATGCCCTCTTCTGGTGTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR TCA 72 bp | CAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGTaGCGAATGACGGCAATGGCGGCTCAAGAGTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QGPMKVAHSWSR*RMTAMAAQELR Trigger: TCTCAACTCTTGAGCCGCCATTGCCGTCATTCGTCACCTAGACCATGAGTGTGCCACTTTCATTGGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR TCA 72 bp | AGGACCTCTAGAAGAGCAGCCAGTGCTCTTAACCGCTaGGCTGAGCCATCTCTCCAGGACTCTCACTACTTT | + |
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Preference number: 3 (lower is better) Translates to: RTSRRAASALNR*AEPSLQDSHYF Trigger: AAAGTAGTGAGAGTCCTGGAGAGATGGCTCAGCTCAGCGGTTAAGAGCACTGGCTGCTCTTCTAGAGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGATGGCGGCTCAAGAGTaGAGACTCAGTGTATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWMAAQE*RLSVWR Trigger: CCTCCATACACTGAGTCTCAACTCTTGAGCCGCCAT...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACATGGCGGCTCAAGAGTaGAGACTCAGTGTATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYMAAQE*RLSVWR Trigger: CCTCCATACACTGAGTCTCAACTCTTGAGCCGCCAT...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR TCA 72 bp | GTGACTCACACTACTGACAATTACGAAGTAGAGAGCTaGAAGAACGGCACTCAACAGAGGTCACCATGCGTG | + |
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Preference number: 3 (lower is better) Translates to: VTHTTDNYEVES*KNGTQQRSPCV Trigger: CACGCATGGTGACCTCTGTTGAGTGCCGTTCTTTCAGCTCTCTACTTCGTAATTGTCAGTAGTGTGAGTCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR GCA 72 bp | TGTGAGCAACATAAAGCCTTTCTTTCCTCCCCAGCTTaGTTCTGGTTGTGGTGTTTCACCACAGCAATAGTA | + |
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Preference number: 3 (lower is better) Translates to: CEQHKAFLSSPA*FWLWCFTTAIV Trigger: TACTATTGCTGTGGTGAAACACCACAACCAGAAGCAAGCTGGGGAGGAAAGAAAGGCTTTATGTTGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR CAA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTGTAAAAGAGCCAGTCTaGTTAGCAGCTAAGTATCGC | + |
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Preference number: 3 (lower is better) Translates to: ALANTILEDLEMKASYSVVKEPV*LAAKYR Trigger: GCGATACTTAGCTGCTAACAAGACTGGCTCTTTTAC...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTCACCCCTCCCCCAAATaGTCATTCATACTGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: ALANTILEDLEMKASYSVHPSPK*SFILVK Trigger: TTTTACCAGTATGAATGACAATTTGGGGGAGGGGTG...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| 3UTR CCA 72 bp | AAAGCCTTTCTTTCCTCCCCAGCTTGCTTCTGGTTGTaGTGTTTCACCACAGCAATAGTAATCCTAACTAAG | + |
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Preference number: 3 (lower is better) Translates to: KAFLSSPACFWL*CFTTAIVILTK Trigger: CTTAGTTAGGATTACTATTGCTGTGGTGAAACACCACAACCAGAAGCAAGCTGGGGAGGAAAGAAAGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR CCA 72 bp | CAACATAAAGCCTTTCTTTCCTCCCCAGCTTGCTTCTaGTTGTGGTGTTTCACCACAGCAATAGTAATCCTA | + |
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Preference number: 3 (lower is better) Translates to: QHKAFLSSPACF*LWCFTTAIVIL Trigger: TAGGATTACTATTGCTGTGGTGAAACACCACAACCAGAAGCAAGCTGGGGAGGAAAGAAAGGCTTTATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTCCTTATGTGTAGGTGTGACAAAGACAAGGAGGTACTTAGGATTCTTAAGTGTATGGAGGGATATTaGACTCCTCCGTATGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CVLMCRCDKDKEVLRILKCMEGY*TPPYES Trigger: GGACTCATACGGAGGAGTCAAATATCCCTCCATACA...CTTAAGAATCCTAAGTACCTCCTTGTCTTTGTCACACCTACACATAAGGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR TCA 72 bp | AGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATaGTCTCGAAGGTTTCTCTTTAGTGTTCTCATACTG | + |
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Preference number: 3 (lower is better) Translates to: RDSSSCIKASLS*SRRFLFSVLIL Trigger: CAGTATGAGAACACTAAAGAGAAACCTTCGAGATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR CCA 72 bp | CCTTCGTTTTTCTCAGTGAAGACCCATAGTGTACTCTaGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAA | + |
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Preference number: 3 (lower is better) Translates to: PSFFSVKTHSVL*LIRDFETVFFE Trigger: TTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACTATGGGTCTTCACTGAGAAAAACGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR-3UTR CAA 90 bp | ACTTATTTTATGTATATAAGTACACTCTTGCTGTCTTCAGACACACCAGAAGAGTCTTTCCTCCCCAGCTaGCTTCTGGTTGTGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: TYFMYISTLLLSSDTPEESFLPS*LLVVVF Trigger: AAACACCACAACCAGAAGCAAGCTGGGGAGGAAAGA...CTCTTCTGGTGTGTCTGAAGACAGCAAGAGTGTACTTATATACATAAAATAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTATTTTATGTATATAAGTACACTCTTGCTGTCTTCAGACACACCAGAAGAGCATGAGTGCTGGGAATaGAACTCAGGACCTCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: TYFMYISTLLLSSDTPEEHECWE*NSGPLE Trigger: TTCTAGAGGTCCTGAGTTCAATTCCCAGCACTCATG...CTCTTCTGGTGTGTCTGAAGACAGCAAGAGTGTACTTATATACATAAAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| 3UTR TCA 72 bp | AAGAGTGTTTTTAATGGACTAAACACTGGTGATCACTaGGTTATTAAGGTACAACAGCAGCATGGTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: KSVFNGLNTGDH*VIKVQQQHGSN Trigger: ATTTGAACCATGCTGCTGTTGTACCTTAATAACTCAGTGATCACCAGTGTTTAGTCCATTAAAAACACTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR TCA 72 bp | GTACTTAGGATTCTTAAGTCCCTTCAAAGCAAGCTCTaGAATTTGAAACAAACAACTTGCTTACCAAAATGT | + |
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Preference number: 3 (lower is better) Translates to: VLRILKSLQSKL*NLKQTTCLPKC Trigger: ACATTTTGGTAAGCAAGTTGTTTGTTTCAAATTTCAGAGCTTGCTTTGAAGGGACTTAAGAATCCTAAGTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| 3UTR CAA 72 bp | GAAAGAACGGCACTCAACAGAGGTCACCATGCGTGCTaGCACTCCTGGGAGAGAGGCAGACACACGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: ERTALNRGHHAC*HSWERGRHTVR Trigger: CCTAACCGTGTGTCTGCCTCTCTCCCAGGAGTGCAAGCACGCATGGTGACCTCTGTTGAGTGCCGTTCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAGCCAGTGCTCTTAACCGCTGAGCTGAGCCATCTCTCCAGGACTCTCTTTATAAGCCTTTCCTaGGCGGTAGTAACAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: EEQPVLLTAELSHLSRTLFISLS*AVVTGC Trigger: GCAACCTGTTACTACCGCTCAGGAAAGGCTTATAAA...GAGAGTCCTGGAGAGATGGCTCAGCTCAGCGGTTAAGAGCACTGGCTGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| CDS-3UTR CCA 90 bp | TGCACTCCTGGGAGAGAGGCAGACACACGGTTAGGGACAGCTCCAGCTGTATTATTCCTCCTGGGTTATTaGCTCCTCATCATCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CTPGREADTRLGTAPAVLFLLGY*LLIIWK Trigger: CTTCCAGATGATGAGGAGCCAATAACCCAGGAGGAA...TAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGCCTCTCTCCCAGGAGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS-3UTR TCA 90 bp | TGCACTCCTGGGAGAGAGGCAGACACACGGTTAGGGACAGCTCCAGCTGTATTATTTATAAGCCTTTCCTaGGCGGTAGTAACAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CTPGREADTRLGTAPAVLFISLS*AVVTGC Trigger: GCAACCTGTTACTACCGCTCAGGAAAGGCTTATAAA...TAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGCCTCTCTCCCAGGAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTGTCATGCTGCTCTCCTaGGATTCATCTGTCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: AFHSVYSQGPMKVAHSWSVMLLS*DSSVPM Trigger: CATGGGGACAGATGAATCCCAGGAGAGCAGCATGAC...AGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAGCCAGTGCTCTTAACCGCTGAGCTGAGCCATCTCTCCAGGACTCTCAGAACTTTGTGTTTGTaGAACAAGTACTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEQPVLLTAELSHLSRTLRTLCL*NKYWCD Trigger: GTCACACCAGTACTTGTTGCACAAACACAAAGTTCT...GAGAGTCCTGGAGAGATGGCTCAGCTCAGCGGTTAAGAGCACTGGCTGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGCATCTGCATCTGTCATaGTGCTCTCCTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HCLPFCVQSGSNESGTLMHLHLS*CSPGIH Trigger: ATGAATCCCAGGAGAGCAGCATGACAGATGCAGATG...CATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTGGCTCCTCATCATCTaGAAGGTAGCGCTTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWWLLII*KVALVN Trigger: ATTGACAAGCGCTACCTTCCAGATGATGAGGAGCCA...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTTTATAAGCCTTTCCTaGGCGGTAGTAACAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWFISLS*AVVTGC Trigger: GCAACCTGTTACTACCGCTCAGGAAAGGCTTATAAA...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTGCATTTCTGCGAGGCTaGACTTCTCTTGCTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFHSVYSQGPMKVAHSWSAFLRG*TSLACN Trigger: ATTACAAGCAAGAGAAGTTCAGCCTCGCAGAAATGC...AGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGAAAACCGAGGCTCTGTaGAATTTGCATAGAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWKTEAL*NLHRGF Trigger: GAACCCTCTATGCAAATTTCACAGAGCCTCGGTTTT...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTCCTGGGAGAGAGGCAGACACACGGTTAGGGACAGCTCCAGCTGTATTAAGGGTTGATATCAAGTaGTTTCTGGAAATGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTPGREADTRLGTAPAVLRVDIK*FLEMHF Trigger: GAAATGCATTTCCAGAAAGCACTTGATATCAACCCT...TAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGCCTCTCTCCCAGGAGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACCTGCATCTGTCATGCTaGTCTCCTGGGATTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYLHLSC*SPGIHL Trigger: CAGATGAATCCCAGGAGAGCAGCATGACAGATGCAG...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | TTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGTTCCTCCTGGGTTATTaGCTCCTCATCATCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHSVYSQGPMKVAHSWSRFLLGY*LLIIWK Trigger: CTTCCAGATGATGAGGAGCCAATAACCCAGGAGGAA...CCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGATGATCTGTTCCTCCTaGGTTATTGGCTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWMICSS*VIGSSS Trigger: TGATGAGGAGCCAATAACCCAGGAGGAACAGATCAT...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | CACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGATGATCTGTTCCTCCTaGGTTATTGGCTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HCLPFCVQSGSNESGTLMMICSS*VIGSSS Trigger: TGATGAGGAGCCAATAACCCAGGAGGAACAGATCAT...CATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTGTCATGCTGCTCTCCTaGGATTCATCTGTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVVMLLS*DSSVPM Trigger: CATGGGGACAGATGAATCCCAGGAGAGCAGCATGAC...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTTCTTTAGTGCATGCTaGACTACTCCAATGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWFFSAC*TTPMWQ Trigger: TTGCCACATTGGAGTAGTTCAGCATGCACTAAAGAA...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTTCACTTTCCGCCGCATaGAGTTGTGTGTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVSLSAA*SCVSSA Trigger: TGCAGATGACACACAACTTCATGCGGCGGAAAGTGA...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | GCAGACACACGGTTAGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATGATCTGGAAATGCATTTCTaGGAGGCTGAACTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ADTRLGTAPAVLRLLYHDLEMHF*EAELLL Trigger: CAAGAGAAGTTCAGCCTCGCAGAAATGCATTTCCAG...ATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGCTGGAAATGCATTTCTaGGAGGCTGAACTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FHSVYSQGPMKVAHSWSRLEMHF*EAELLL Trigger: CAAGAGAAGTTCAGCCTCGCAGAAATGCATTTCCAG...CCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | CACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGAGGCTCTGTGAAATTTaGATAGAGGGTTCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCLPFCVQSGSNESGTLMRLCEI*IEGSWD Trigger: ATCCCAAGAACCCTCTATGCAAATTTCACAGAGCCT...CATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGAGGCTCTGTGAAATTTaGATAGAGGGTTCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWRLCEI*IEGSWD Trigger: ATCCCAAGAACCCTCTATGCAAATTTCACAGAGCCT...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTGCATTTCTGCGAGGCTaGACTTCTCTTGCTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVAFLRG*TSLACN Trigger: ATTACAAGCAAGAGAAGTTCAGCCTCGCAGAAATGC...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTCTGAACTCTGAGGGTTaGTATCAAGTGCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVLNSEG*YQVLSG Trigger: TCCAGAAAGCACTTGATATCAACCCTCAGAGTTCAG...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGAGAACTTTGTGTTTGTaGAACAAGTACTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHSVYSQGPMKVAHSWSRRTLCL*NKYWCD Trigger: GTCACACCAGTACTTGTTGCACAAACACAAAGTTCT...CCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGAGGGTTGATATCAAGTaGTTTCTGGAAATGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWRVDIK*FLEMHF Trigger: GAAATGCATTTCCAGAAAGCACTTGATATCAACCCT...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTAAGTTGTGTGTCATCTaGATCTGTCATGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVKLCVI*ICHAAL Trigger: GAGAGCAGCATGACAGATGCAGATGACACACAACTT...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTGACTTTGTTCCAGTTTaGCCCATTCTTGCAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVDFVPV*PILATD Trigger: GTCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTC...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | GCACTTGCTAACACCATTCTCGAAGACCTAGAAATGAAGGCCAGTTACTCTGTTTTAAATGCCTGGATCTaGGGTGTGACTGTGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ALANTILEDLEMKASYSVLNAWI*GVTVVI Trigger: AATAACCACAGTCACACCTCAGATCCAGGCATTTAA...AACAGAGTAACTGGCCTTCATTTCTAGGTCTTCGAGAATGGTGTTAGCAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACAGTAAAACTGAACTCTaGGGGTTGATATCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYSKTEL*GLISSA Trigger: AGCACTTGATATCAACCCTCAGAGTTCAGTTTTACT...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAAAGAAAGAGACCCAAGAAGCAGTTACTATGTGGAAATAAGGCTTCCTCACTTTCCGCCGCATaGAGTTGTGTGTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKRKRPKKQLLCGNKASSLSAA*SCVSSA Trigger: TGCAGATGACACACAACTTCATGCGGCGGAAAGTGA...GGAAGCCTTATTTCCACATAGTAACTGCTTCTTGGGTCTCTTTCTTTTTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACAGAACTTTGTGTTTGTaGAACAAGTACTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYRTLCL*NKYWCD Trigger: GTCACACCAGTACTTGTTGCACAAACACAAAGTTCT...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTCTGCATCTGTCATGCTaGTCTCCTGGGATTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLWLIRDFETVFFEKSVLHLSC*SPGIHL Trigger: CAGATGAATCCCAGGAGAGCAGCATGACAGATGCAG...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCTTATGTGTAGGTGTGACAAAGACAAGGAGGTACTTAGGATTCTTAAGAAAACCGAGGCTCTGTaGAATTTGCATAGAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLMCRCDKDKEVLRILKKTEAL*NLHRGF Trigger: GAACCCTCTATGCAAATTTCACAGAGCCTCGGTTTT...CTTAAGAATCCTAAGTACCTCCTTGTCTTTGTCACACCTACACATAAGGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCTTATGTGTAGGTGTGACAAAGACAAGGAGGTACTTAGGATTCTTAAGTTCTTTAGTGCATGCTaGACTACTCCAATGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CVLMCRCDKDKEVLRILKFFSAC*TTPMWQ Trigger: TTGCCACATTGGAGTAGTTCAGCATGCACTAAAGAA...CTTAAGAATCCTAAGTACCTCCTTGTCTTTGTCACACCTACACATAAGGACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTAAGTTGTGTGTCATCTaGATCTGTCATGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLWLIRDFETVFFEKSVKLCVI*ICHAAL Trigger: GAGAGCAGCATGACAGATGCAGATGACACACAACTT...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAAAAGAAAGAGACCCAAGAAGCAGTTACTATGTGGAAATAAGGCTTCCGACTTTGTTCCAGTTTaGCCCATTCTTGCAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRKRKRPKKQLLCGNKASDFVPV*PILATD Trigger: GTCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTC...GGAAGCCTTATTTCCACATAGTAACTGCTTCTTGGGTCTCTTTCTTTTTCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR CCA 90 bp | TGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTTTTGGCTCCTCATCATCTaGAAGGTAGCGCTTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTLANQRLRNCFLRKECFWLLII*KVALVN Trigger: ATTGACAAGCGCTACCTTCCAGATGATGAGGAGCCA...AAAACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAAAGAAAGAGACCCAAGAAGCAGTTACTATGTGGAAATAAGGCTTCCTTAAATGCCTGGATCTaGGGTGTGACTGTGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QRKRKRPKKQLLCGNKASLNAWI*GVTVVI Trigger: AATAACCACAGTCACACCTCAGATCCAGGCATTTAA...GGAAGCCTTATTTCCACATAGTAACTGCTTCTTGGGTCTCTTTCTTTTTCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAAAGAAAGAGACCCAAGAAGCAGTTACTATGTGGAAATAAGGCTTCCAGTAAAACTGAACTCTaGGGGTTGATATCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKRKRPKKQLLCGNKASSKTEL*GLISSA Trigger: AGCACTTGATATCAACCCTCAGAGTTCAGTTTTACT...GGAAGCCTTATTTCCACATAGTAACTGCTTCTTGGGTCTCTTTCTTTTTCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATTTTATGTATATAAGTACACTCTTGCTGTCTTCAGACACACCAGAAGAGGACTTTGTTCCAGTTTaGCCCATTCTTGCAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TYFMYISTLLLSSDTPEEDFVPV*PILATD Trigger: GTCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTC...CTCTTCTGGTGTGTCTGAAGACAGCAAGAGTGTACTTATATACATAAAATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTTGCTGTCTTCAGACACACCAGAAGAGGGCATCGGTGCATGAGTGCTGGGGCCAGAACTTTGTGTTaGTGCAACAAGTACTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLAVFRHTRRGHRCMSAGARTLC*CNKYWC Trigger: ACACCAGTACTTGTTGCACAAACACAAAGTTCTGGC...CCCAGCACTCATGCACCGATGCCCTCTTCTGGTGTGTCTGAAGACAGCAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGGTTCCTCCTGGGTTATaGGCTCCTCATCATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHSVYSQGPMKVAHSWSRVPPGL*APHHLE Trigger: TTCCAGATGATGAGGAGCCAATAACCCAGGAGGAAC...CCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGAGACTTTGTTCCAGTTaGGCCCATTCTTGCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HCLPFCVQSGSNESGTLMRLCSS*AHSCNR Trigger: TCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTCT...CATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTTGCATAGAGGGTTCTaGGGATCGATAACAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWLHRGF*GSITMA Trigger: AGCCATTGTTATCGATCCCAAGAACCCTCTATGCAA...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CAA 90 bp | GCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTTTGCATAGAGGGTTCTaGGGATCGATAACAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFHSVYSQGPMKVAHSWSLHRGF*GSITMA Trigger: AGCCATTGTTATCGATCCCAAGAACCCTCTATGCAA...AGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACGTTCCTCCTGGGTTATaGGCTCCTCATCATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYVPPGL*APHHLE Trigger: TTCCAGATGATGAGGAGCCAATAACCCAGGAGGAAC...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
||
| CDS CCA 90 bp | TGTCCCCATGATCTGTTCCTCCTGGGTTATTGGCTCCTCATCATCTaGAAGGTAGCGCTTGTCAATTGCCTCTTTAATCTGATTATTGGC | + |
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Preference number: 5 (lower is better) Translates to: CPHDLFLLGYWLLII*KVALVNCLFNLIIG Trigger: GCCAATAATCAGATTAAAGAGGCAATTGACAAGCGCTACCTTCCAGATGATGAGGAGCCAATAACCCAGGAGGAACAGATCATGGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR CAA 90 bp | TTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGTCTAGGGCCAGAACTTTGTGTTaGTGCAACAAGTACTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FHSVYSQGPMKVAHSWSRARTLC*CNKYWC Trigger: ACACCAGTACTTGTTGCACAAACACAAAGTTCTGGC...CCTAGACCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR CAA 90 bp | GCAGACACACGGTTAGGGACAGCTCCAGCTGTATTAAGGCTTCTCTATCATGATCAAGGCGAGATGAGTTaGACCCAACTTCTTGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: ADTRLGTAPAVLRLLYHDQGEMS*TQLLVN Trigger: GTTTACAAGAAGTTGGGTCAAACTCATCTCGCCTTG...ATCATGATAGAGAAGCCTTAATACAGCTGGAGCTGTCCCTAACCGTGTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS-3UTR CAA 90 bp | ACTGCCTTCCATTCTGTGTACAGTCAGGGTCCAATGAAAGTGGCACACTCATGGGAGGCTGAACTTCTCTaGCTTGTAATAAATCATTCC | + |
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Preference number: 5 (lower is better) Translates to: TAFHSVYSQGPMKVAHSWEAELL*LVINHS Trigger: GGAATGATTTATTACAAGCAAGAGAAGTTCAGCCTC...CCATGAGTGTGCCACTTTCATTGGACCCTGACTGTACACAGAATGGAAGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR CAA 90 bp | AAAGAGCCAGTCTTGTTAGCAGCTAAGTATCGCACTGCCTTCCATTCTGTGTACCAAGGCGAGATGAGTTaGACCCAACTTCTTGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: KEPVLLAAKYRTAFHSVYQGEMS*TQLLVN Trigger: GTTTACAAGAAGTTGGGTCAAACTCATCTCGCCTTG...GTACACAGAATGGAAGGCAGTGCGATACTTAGCTGCTAACAAGACTGGCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR CAA 90 bp | ATGATGAATTGTGAGCAACATAAAGCCTTTCTTTCCTCCCCAGCTTGCTTCTGGAGACTTTGTTCCAGTTaGGCCCATTCTTGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: MMNCEQHKAFLSSPACFWRLCSS*AHSCNR Trigger: TCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTCT...CCAGAAGCAAGCTGGGGAGGAAAGAAAGGCTTTATGTTGCTCACAATTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106961.2 |
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| CDS CCA 90 bp | ACTTCTTGTAAACCTTTCCTATTAGGAAGTAAACGAGGGACTCTTTaGGGACAATCTGCTTCAGTTCCTCGAGTTCTTGTAAAGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: TSCKPFLLGSKRGTL*GQSASVPRVLVKQT Trigger: AGTCTGCTTTACAAGAACTCGAGGAACTGAAGCAGATTGTCCCCAAAGAGTCCCTCGTTTACTTCCTAATAGGAAAGGTTTACAAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS-3UTR CAA 90 bp | AGTGTACTCTGGCTAATCAGAGACTTCGAAACTGTTTTCTTCGAAAAGAGTGTTAGACTTTGTTCCAGTTaGGCCCATTCTTGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: SVLWLIRDFETVFFEKSVRLCSS*AHSCNR Trigger: TCTGTTGCAAGAATGGGCCAAACTGGAACAAAGTCT...AACACTCTTTTCGAAGAAAACAGTTTCGAAGTCTCTGATTAGCCAGAGTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS-3UTR CAA 90 bp | TGTGTCCTTATGTGTAGGTGTGACAAAGACAAGGAGGTACTTAGGATTCTTAAGGAGGCTGAACTTCTCTaGCTTGTAATAAATCATTCC | + |
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Preference number: 5 (lower is better) Translates to: CVLMCRCDKDKEVLRILKEAELL*LVINHS Trigger: GGAATGATTTATTACAAGCAAGAGAAGTTCAGCCTC...CTTAAGAATCCTAAGTACCTCCTTGTCTTTGTCACACCTACACATAAGGACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093923.9 |
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| CDS GCA 72 bp | TGGCTCCTCATCATCTGGAAGGTAGCGCTTGTCAATTaGCTCTTTAATCTGATTATTGGCTCCTTTAGGATC | + |
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Preference number: 6 (lower is better) Translates to: WLLIIWKVALVN*LFNLIIGSFRI Trigger: GATCCTAAAGGAGCCAATAATCAGATTAAAGAGGCAATTGACAAGCGCTACCTTCCAGATGATGAGGAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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| CDS CCA 72 bp | AAACCTTTCCTATTAGGAAGTAAACGAGGGACTCTTTaGGGACAATCTGCTTCAGTTCCTCGAGTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: KPFLLGSKRGTL*GQSASVPRVLV Trigger: TACAAGAACTCGAGGAACTGAAGCAGATTGTCCCCAAAGAGTCCCTCGTTTACTTCCTAATAGGAAAGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093923.9 ENSMUST00000106962.9 |
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