Pregenerated sensors for CDC26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066149Ensembl transcript IDs: ENSMUST00000084525.12, ENSMUST00000107459.2, ENSMUST00000134727.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCACTTCGTGGCTGAGCTCTGGTTCGCATCTGCAAACTCAGAATaGTGTGCCCTCTCAGGAAGTAAGAGAGTCGGCACTCAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: SHFVAELWFASANSE*CALSGSKRVGTQHS Trigger: AGAGTGCTGAGTGCCGACTCTCTTACTTCCTGAGAGGGCACACCATTCTGAGTTTGCAGATGCGAACCAGAGCTCAGCCACGAAGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | TGCTGGTTTTGCAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCATaGTGGCTCACATGTATCTGTAACTCCAGTTCCAGGGCATCCAGC | + |
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Preference number: 1 (lower is better) Translates to: CWFCRRPRLHSQHSS*WLTCICNSSSRASS Trigger: GCTGGATGCCCTGGAACTGGAGTTACAGATACATGTGAGCCACCATGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCAAAACCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | CCAGCTATAAAGATAGAGACAGAGAGGACTGCAGGTGGGTATAATTaGAGGTGGGCCTGGGATTCTGCACAGCGAGGGACTCTGTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: PAIKIETERTAGGYN*RWAWDSAQRGTLLQ Trigger: TTGCAACAGAGTCCCTCGCTGTGCAGAATCCCAGGCCCACCTGCAATTATACCCACCTGCAGTCCTCTCTGTCTCTATCTTTATAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | AGTTCCAGGGCATCCAGCATCCTCTTTTGGCCTCCATGGGCACTTTaGCGCCTTTCATCCGTAGTTCATAACCCCTGTGTTCATGCCATT | + |
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Preference number: 1 (lower is better) Translates to: SSRASSILFWPPWAL*RLSSVVHNPCVHAI Trigger: AATGGCATGAACACAGGGGTTATGAACTACGGATGAAAGGCGGCAAAGTGCCCATGGAGGCCAAAAGAGGATGCTGGATGCCCTGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | TGGTTTTGCAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCATGGTaGCTCACATGTATCTGTAACTCCAGTTCCAGGGCATCCAGCATC | + |
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Preference number: 1 (lower is better) Translates to: WFCRRPRLHSQHSSW*LTCICNSSSRASSI Trigger: GATGCTGGATGCCCTGGAACTGGAGTTACAGATACATGTGAGCCACCATGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCAAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | ACAAACTTGGTGGTTGGCTCAGAGGTTGAACAAACTTGCTGGTTTTaGAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCATGGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: TNLVVGSEVEQTCWF*RRPRLHSQHSSWWL Trigger: GAGCCACCATGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCAAAACCAGCAAGTTTGTTCAACCTCTGAGCCAACCACCAAGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | CTTCGACTCTTTGAGATTCCTACTTCAGCCTCCCAAGTGCTGGATTaGAGCCTGAGCACACTCATCTGGGATCTCTGTTGCTTGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LRLFEIPTSASQVLD*SLSTLIWDLCCLKD Trigger: ATCCTTCAAGCAACAGAGATCCCAGATGAGTGTGCTCAGGCTGCAATCCAGCACTTGGGAGGCTGAAGTAGGAATCTCAAAGAGTCGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCAAAACCACCCGTAATGAGATCTaGTGCCCTCTTCTGGTGCATCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLKTTRNEI*CPLLVHLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCAGATCTCATTACGGGTGGTTTTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | TTCCAGGAAGAAGCCAGAATTTGGCTTCCAGCCAATCAGAAAGGTTaGACAGCAGTAATTTCACACAGAAGTCACCTCTCCCTGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FQEEARIWLPANQKG*TAVISHRSHLSLQE Trigger: CTCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCTTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | ATAAAGATAGAGACAGAGAGGACTGCAGGTGGGTATAATTGCAGGTaGGCCTGGGATTCTGCACAGCGAGGGACTCTGTTGCAAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: IKIETERTAGGYNCR*AWDSAQRGTLLQKQ Trigger: TTGTTTTTGCAACAGAGTCCCTCGCTGTGCAGAATCCCAGGCCCACCTGCAATTATACCCACCTGCAGTCCTCTCTGTCTCTATCTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR TCA 90 bp | CACCTACGATTGCCTCAAACTCAGAATCTGTCTCCCTCAAACTTCTaGGTGCTATGGTTACAGGTGTACACCACCATGCCCTGTTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: HLRLPQTQNLSPSNF*VLWLQVYTTMPCSY Trigger: ATAGGAACAGGGCATGGTGGTGTACACCTGTAACCATAGCACTCAGAAGTTTGAGGGAGACAGATTCTGAGTTTGAGGCAATCGTAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | ATCCTTTCCTTTGTTTCCTTTGCCCGCTGGAAGGCCTTTGCAGGCTaGAATAATAAAGAGTCTTATGTACAGCCTGTGTCTTGGGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: ILSFVSFARWKAFAG*NNKESYVQPVSWGF Trigger: AAACCCCCAAGACACAGGCTGTACATAAGACTCTTTATTATTGCAGCCTGCAAAGGCCTTCCAGCGGGCAAAGGAAACAAAGGAAAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | AACCTGGTCTGTAAGTCAAAGGAAATGAAGTATAATCCTGACACCTaGGTGTGGTGTTTACAGACACTCCACAGCTTCTGTCTCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: NLVCKSKEMKYNPDT*VWCLQTLHSFCLSL Trigger: CAGGGAGAGACAGAAGCTGTGGAGTGTCTGTAAACACCACACCCAGGTGTCAGGATTATACTTCATTTCCTTTGACTTACAGACCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | TACGATTGCCTCAAACTCAGAATCTGTCTCCCTCAAACTTCTGAGTaGTATGGTTACAGGTGTACACCACCATGCCCTGTTCCTATTTTG | + |
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Preference number: 1 (lower is better) Translates to: YDCLKLRICLPQTSE*YGYRCTPPCPVPIL Trigger: CAAAATAGGAACAGGGCATGGTGGTGTACACCTGTAACCATAGCACTCAGAAGTTTGAGGGAGACAGATTCTGAGTTTGAGGCAATCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | CTCATTCTGTTAATAAGAAAGCATAGGGCTGGAGAGGTGGCTCAGTaGTTAAGAACACCGACTGCTCTTCTGAAGGTCCTGAGTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: LILLIRKHRAGEVAQ*LRTPTALLKVLSSN Trigger: ATTTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGTTCTTAACCACTGAGCCACCTCTCCAGCCCTATGCTTTCTTATTAACAGAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR GCA 90 bp | CTCCCTCAAACTTCTGAGTGCTATGGTTACAGGTGTACACCACCATaGCCTGTTCCTATTTTGAATTTCTTCTACATACTGGAGTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPQTSECYGYRCTPP*PVPILNFFYILELW Trigger: CCACAACTCCAGTATGTAGAAGAAATTCAAAATAGGAACAGGGCATGGTGGTGTACACCTGTAACCATAGCACTCAGAAGTTTGAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 90 bp | AAGACAAGGAGAATGATGTCACTTGTAGCAGTTACCTGTCAGAGCTaGCGATTAGCAGTGCTACTACCTTTAAGGACGTCTCACATTTTT | + |
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Preference number: 1 (lower is better) Translates to: KTRRMMSLVAVTCQS*RLAVLLPLRTSHIF Trigger: AAAAATGTGAGACGTCCTTAAAGGTAGTAGCACTGCTAATCGCCAGCTCTGACAGGTAACTGCTACAAGTGACATCATTCTCCTTGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR TCA 90 bp | AGTGCTATGGTTACAGGTGTACACCACCATGCCCTGTTCCTATTTTaGATTTCTTCTACATACTGGAGTTGTGGAACACATAGAGAGATT | + |
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Preference number: 1 (lower is better) Translates to: SAMVTGVHHHALFLF*ISSTYWSCGTHREI Trigger: AATCTCTCTATGTGTTCCACAACTCCAGTATGTAGAAGAAATTCAAAATAGGAACAGGGCATGGTGGTGTACACCTGTAACCATAGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGAGCATCTCCGTACAGCTCAGCAATGTCACGCTGCCCTGCCTCTCCTCCTTAGGAGCATGGGATTaGAAAGCAGGTGGCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: LRSISVQLSNVTLPCLSSLGAWD*KAGGST Trigger: TGTGGAGCCACCTGCTTTCCAATCCCATGCTCCTAA...GGAGGAGAGGCAGGGCAGCGTGACATTGCTGAGCTGTACGGAGATGCTCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACCTTTGTGCTCTGGAGTTGGACACGTGGTTTCCTGGGTGTGAAAGCTCTGCCTCCATGGGCACTTTaGCGCCTTTCATCCGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: CTFVLWSWTRGFLGVKALPPWAL*RLSSVV Trigger: AACTACGGATGAAAGGCGGCAAAGTGCCCATGGAGG...CAGAGCTTTCACACCCAGGAAACCACGTGTCCAACTCCAGAGCACAAAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGAATTGCAGGTGGGCCTaGGATTCTGCACAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AASITRLSCSPHCFSPYRNCRWA*DSAQRG Trigger: CCCTCGCTGTGCAGAATCCCAGGCCCACCTGCAATT...CCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGTTTTGCAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCATGGTGGCTCCTGACACCTGGGTGTaGTGTTTACAGACACTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLVLQKAQAPFSALFMVAPDTWV*CLQTLH Trigger: GTGGAGTGTCTGTAAACACCACACCCAGGTGTCAGG...AGCCACCATGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCAAAACCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGTGCTGGATTGCAGCCTaGGCACACTCATCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: AASITRLSCSPHCFSPYRCWIAA*AHSSGI Trigger: GATCCCAGATGAGTGTGCTCAGGCTGCAATCCAGCA...CCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACCTTTGTGCTCTGGAGTTGGACACGTGGTTTCCTGGGTGTGAAAGCTCTGTTCGTGGCTGAGCTCTaGTTCGCATCTGCAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: CTFVLWSWTRGFLGVKALFVAEL*FASANS Trigger: TGAGTTTGCAGATGCGAACCAGAGCTCAGCCACGAA...CAGAGCTTTCACACCCAGGAAACCACGTGTCCAACTCCAGAGCACAAAGGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGTCCCAAGTGCTGGATTaGAGCCTGAGCACACTCATC | + |
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Preference number: 2 (lower is better) Translates to: AASITRLSCSPHCFSPYRSQVLD*SLSTLI Trigger: GATGAGTGTGCTCAGGCTGCAATCCAGCACTTGGGA...CCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CAA 90 bp | TATAATTGCAGGTGGGCCTGGGATTCTGCACAGCGAGGGACTCTGTaGCAAAAACAAATGGCTATGGGTGTAGCTCAGTTGGTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YNCRWAWDSAQRGTL*QKQMAMGVAQLVES Trigger: GCTCTCAACCAACTGAGCTACACCCATAGCCATTTGTTTTTGCAACAGAGTCCCTCGCTGTGCAGAATCCCAGGCCCACCTGCAATTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTCACGCTGCCCTGCCTCTCCTCCGTAGTGCTGCTTCCATCACGAGATTATAGCGAGGGACTCTGTTaGAAAAACAAATGGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: NVTLPCLSSVVLLPSRDYSEGLC*KNKWLW Trigger: CCATAGCCATTTGTTTTTGCAACAGAGTCCCTCGCT...ATAATCTCGTGATGGAAGCAGCACTACGGAGGAGAGGCAGGGCAGCGTGACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCTCAGCACTCTTCATGGTGGCTCACATGTATCTGTAACTCCAGTTCCAGGCTTCCACAGCTGGTaGTTCTGTCCCTGGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SILSTLHGGSHVSVTPVPGFHSW*FCPWVL Trigger: TAAAACCCAGGGACAGAACCACCAGCTGTGGAAGCC...TGGAACTGGAGTTACAGATACATGTGAGCCACCATGAAGAGTGCTGAGAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CAA 90 bp | TTTCCAGGAAGAAGCCAGAATTTGGCTTCCAGCCAATCAGAAAGGTaGGACAGCAGTAATTTCACACAGAAGTCACCTCTCCCTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FPGRSQNLASSQSER*DSSNFTQKSPLPAG Trigger: TCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCTTCCTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR CAA 90 bp | GCAGGCAGATCCTTTCCTTTGTTTCCTTTGCCCGCTGGAAGGCCTTaGCAGGCTGCAATAATAAAGAGTCTTATGTACAGCCTGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: AGRSFPLFPLPAGRP*QAAIIKSLMYSLCL Trigger: AAGACACAGGCTGTACATAAGACTCTTTATTATTGCAGCCTGCAAAGGCCTTCCAGCGGGCAAAGGAAACAAAGGAAAGGATCTGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAATTTCACACAGAAGTCACCTCTCCCTGCAGGAGACAGAAAACCTTCTGCTTCTGTCCCAGGGGTCTaGCATACAAGAGAATCCATC | + |
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Preference number: 2 (lower is better) Translates to: SNFTQKSPLPAGDRKPSASVPGV*HTRESI Trigger: GATGGATTCTCTTGTATGCCAGACCCCTGGGACAGA...AGCAGAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR CAA 90 bp | CAGTTAAGCCTTCTGCGGTCCAACTTTCCAGGAAGAAGCCAGAATTaGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QLSLLRSNFPGRSQN*ASSQSERLDSSNFT Trigger: TGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCTTCCTGGAAAGTTGGACCGCAGAAGGCTTAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084525.12 ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGAATTTGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACAGAAGTCACCTCTCCCTaGAGGAGACAGAAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQNLASSQSERLDSSNFTEVTSP*RRQKTF Trigger: GAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGACTTC...TGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAATTTGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACACAGTCTGTCCCAGGGGTCTaGCATACAAGAGAATCCATC | + |
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Preference number: 2 (lower is better) Translates to: QNLASSQSERLDSSNFTQSVPGV*HTRESI Trigger: GATGGATTCTCTTGTATGCCAGACCCCTGGGACAGA...CTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGCTACTGGTAAACATCACCTTTaGGGACAGCTGGCTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: FHHEIILFTSLLLSLSATGKHHL*GQLAQI Trigger: GATTTGAGCCAGCTGTCCCCAAAGGTGATGTTTACC...AGTAGCCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGTTTTGAGACAAGGTCAGTGTCACCTACGATTGCCTCAAACTCAGAATCTCTCTTTTGGCCTCCATaGGCACTTTGCCGCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: YCFETRSVSPTIASNSESLFWPP*ALCRLS Trigger: TGAAAGGCGGCAAAGTGCCCATGGAGGCCAAAAGAG...AGATTCTGAGTTTGAGGCAATCGTAGGTGACACTGACCTTGTCTCAAAACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CAA 90 bp | AGGCTACACCACATAGGAACTGCTATCCTAACTGTCTCAAAGCCATaGATAGTCAAGTGTGGTGACACATACCTGTCCTTCCAGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RLHHIGTAILTVSKP*IVKCGDTYLSFQCL Trigger: CAAACACTGGAAGGACAGGTATGTGTCACCACACTTGACTATCAATGGCTTTGAGACAGTTAGGATAGCAGTTCCTATGTGGTGTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGAAGGCTTCAGGAAAATaGAAGGTCACTCTTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: AASITRLSCSPHCFSPYRKASGK*KVTLLN Trigger: ATTCAGAAGAGTGACCTTTCATTTTCCTGAAGCCTT...CCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | TACTGTTTTGAGACAAGGTCAGTGTCACCTACGATTGCCTCAAACTCAGAATCTGTCCAATCCCTAGCATaGCCTGCATGTGCATACACA | + |
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Preference number: 2 (lower is better) Translates to: YCFETRSVSPTIASNSESVQSLA*PACAYT Trigger: TGTGTATGCACATGCAGGGCATGCTAGGGATTGGAC...AGATTCTGAGTTTGAGGCAATCGTAGGTGACACTGACCTTGTCTCAAAACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATTTGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACACAGATCTGTCCCAGGGGTCTaGCATACAAGAGAATCCATC | + |
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Preference number: 2 (lower is better) Translates to: RIWLPANQKGWTAVISHRSVPGV*HTRESI Trigger: GATGGATTCTCTTGTATGCCAGACCCCTGGGACAGA...TCTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | ACATACTGGAGTTGTGGAACACATAGAGAGATTTCAGGAGGTAGACAGATGGTTACCTTTGGGGACAGCTaGCTCAAATCTAGGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: TYWSCGTHREISGGRQMVTFGDS*LKSRLH Trigger: GTGTAGCCTAGATTTGAGCCAGCTGTCCCCAAAGGT...AACCATCTGTCTACCTCCTGAAATCTCTCTATGTGTTCCACAACTCCAGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGCTACTCCTCAAACTTCTGAGTaGTATGGTTACAGGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: FHHEIILFTSLLLSLSATPQTSE*YGYRCT Trigger: TGTACACCTGTAACCATAGCACTCAGAAGTTTGAGG...AGTAGCCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGTTTTGAGACAAGGTCAGTGTCACCTACGATTGCCTCAAACTCAGAATCTTCTGCAAACTCAGAATaGTGTGCCCTCTCAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: YCFETRSVSPTIASNSESSANSE*CALSGS Trigger: ACTTCCTGAGAGGGCACACCATTCTGAGTTTGCAGA...AGATTCTGAGTTTGAGGCAATCGTAGGTGACACTGACCTTGTCTCAAAACAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR-3UTR TCA 90 bp | ACATACTGGAGTTGTGGAACACATAGAGAGATTTCAGGAGGTAGACAGATGGTTGACAATCTGATCATTTaGATCCAGTCTCCAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TYWSCGTHREISGGRQMVDNLII*IQSPVC Trigger: ACAAACTGGAGACTGGATTCAAATGATCAGATTGTC...AACCATCTGTCTACCTCCTGAAATCTCTCTATGTGTTCCACAACTCCAGTATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 72 bp | AGGTGGCTCCACAGCTCCCACTTCGTGGCTGAGCTCTaGTTCGCATCTGCAAACTCAGAATGGTGTGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RWLHSSHFVAEL*FASANSEWCAL Trigger: GAGGGCACACCATTCTGAGTTTGCAGATGCGAACCAGAGCTCAGCCACGAAGTGGGAGCTGTGGAGCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
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| 3UTR CCA 72 bp | GTTGAGGCCATTAGGAGCATGGGATTGGAAAGCAGGTaGCTCCACAGCTCCCACTTCGTGGCTGAGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VEAIRSMGLESR*LHSSHFVAELW Trigger: CCAGAGCTCAGCCACGAAGTGGGAGCTGTGGAGCCACCTGCTTTCCAATCCCATGCTCCTAATGGCCTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | TTGTGCTCTGGAGTTGGACACGTGGTTTCCTGGGTGTaGAAGCTCTGGCTGAGGAGCATCTCCGTACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSGVGHVVSWV*KLWLRSISVQL Trigger: GAGCTGTACGGAGATGCTCCTCAGCCAGAGCTTTCACACCCAGGAAACCACGTGTCCAACTCCAGAGCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | ATTGAGAGGGGAGGCTGCACCTTTGTGCTCTGGAGTTaGACACGTGGTTTCCTGGGTGTGAAAGCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IERGGCTFVLWS*TRGFLGVKALA Trigger: AGCCAGAGCTTTCACACCCAGGAAACCACGTGTCCAACTCCAGAGCACAAAGGTGCAGCCTCCCCTCTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | AAGATAGAGACAGAGAGGACTGCAGGTGGGTATAATTaGAGGTGGGCCTGGGATTCTGCACAGCGAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: KIETERTAGGYN*RWAWDSAQRGT Trigger: AGTCCCTCGCTGTGCAGAATCCCAGGCCCACCTGCAATTATACCCACCTGCAGTCCTCTCTGTCTCTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | GTGGCTGAGCTCTGGTTCGCATCTGCAAACTCAGAATaGTGTGCCCTCTCAGGAAGTAAGAGAGTCGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: VAELWFASANSE*CALSGSKRVGT Trigger: AGTGCCGACTCTCTTACTTCCTGAGAGGGCACACCATTCTGAGTTTGCAGATGCGAACCAGAGCTCAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGGTGGCTCAGTGGTTAAGAACACCGACTaGTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRGGSVVKNTD*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGTTCTTAACCACTGAGCCACCTCTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | GCATCCAGCATCCTCTTTTGGCCTCCATGGGCACTTTaGCGCCTTTCATCCGTAGTTCATAACCCCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSILFWPPWAL*RLSSVVHNPCV Trigger: AACACAGGGGTTATGAACTACGGATGAAAGGCGGCAAAGTGCCCATGGAGGCCAAAAGAGGATGCTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | AACATAGAGTCCTGGGTAGGAATTGAGAGGGGAGGCTaGACCTTTGTGCTCTGGAGTTGGACACGTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NIESWVGIERGG*TFVLWSWTRGF Trigger: GAAACCACGTGTCCAACTCCAGAGCACAAAGGTGCAGCCTCCCCTCTCAATTCCTACCCAGGACTCTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TCCCAAGTGCTGGATTGCAGCCTGAGCACACTCATCTaGGATCTCTGTTGCTTGAAGGATGGTCAGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQVLDCSLSTLI*DLCCLKDGQQT Trigger: TGTCTGCTGACCATCCTTCAAGCAACAGAGATCCCAGATGAGTGTGCTCAGGCTGCAATCCAGCACTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TGCAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCATaGTGGCTCACATGTATCTGTAACTCCAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CRRPRLHSQHSS*WLTCICNSSSR Trigger: CCTGGAACTGGAGTTACAGATACATGTGAGCCACCATGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCACGCTGCCCTGCCTCTCCTCCGTAGTGCTGCTTCCATCACGAGATTATTTTCCTTTGTTTCCTTaGCCCGCTGGAAGGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NVTLPCLSSVVLLPSRDYFPLFP*PAGRPL Trigger: CAAAGGCCTTCCAGCGGGCAAAGGAAACAAAGGAAA...ATAATCTCGTGATGGAAGCAGCACTACGGAGGAGAGGCAGGGCAGCGTGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | TTTGAGATTCCTACTTCAGCCTCCCAAGTGCTGGATTaGAGCCTGAGCACACTCATCTGGGATCTCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FEIPTSASQVLD*SLSTLIWDLCC Trigger: GCAACAGAGATCCCAGATGAGTGTGCTCAGGCTGCAATCCAGCACTTGGGAGGCTGAAGTAGGAATCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | GTGGTTGGCTCAGAGGTTGAACAAACTTGCTGGTTTTaGAGAAGGCCCAGGCTCCATTCTCAGCACTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VVGSEVEQTCWF*RRPRLHSQHSS Trigger: TGAAGAGTGCTGAGAATGGAGCCTGGGCCTTCTGCAAAACCAGCAAGTTTGTTCAACCTCTGAGCCAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCAAAACCACCCGTAATGAGATCTaGTGCCCTCTTCTGGTGCATCTGAAGACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLKTTRNEI*CPLLVHLKTAT Trigger: TGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCAGATCTCATTACGGGTGGTTTTGAGCCACCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR GCA 72 bp | ACAAACTTGGTGGTTGGCTCAGAGGTTGAACAAACTTaGTGGTTTTGCAGAAGGCCCAGGCTCCATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TNLVVGSEVEQT*WFCRRPRLHSQ Trigger: CTGAGAATGGAGCCTGGGCCTTCTGCAAAACCAGCAAGTTTGTTCAACCTCTGAGCCAACCACCAAGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | GATATAGGGGAAATAAGGAGGAGAGGTACATACAGATaGCAAATGTGTCCCACCGGAGCCCCTCTACTATCC | + |
|
Preference number: 3 (lower is better) Translates to: DIGEIRRRGTYR*QMCPTGAPLLS Trigger: GGATAGTAGAGGGGCTCCGGTGGGACACATTTGCCATCTGTATGTACCTCTCCTCCTTATTTCCCCTATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | CTTATCGGCTACTTTGCTTTACCTGCTGTGGATTGCTaGTACTTAGCTCTGACTTTGGCCCTTGCTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LIGYFALPAVDC*YLALTLALARS Trigger: GCTCCTAGCAAGGGCCAAAGTCAGAGCTAAGTACCAGCAATCCACAGCAGGTAAAGCAAAGTAGCCGATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCTCCCTGCAGGAGACAGAAAACCTTCTGCTTGGTTGCACACACTTAATGTACTCCTGTCATCATaGTATTCTGTCCCAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPLPAGDRKPSAWLHTLNVLLSS*YSVPGV Trigger: GACCCCTGGGACAGAATACAATGATGACAGGAGTAC...ATTAAGTGTGTGCAACCAAGCAGAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTAATTTCACACAGAAGTCACCTCTCCCTGCAGGAGACAGAAAACCTTCTGGTACTCCTGTCATCATaGTATTCTGTCCCAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AVISHRSHLSLQETENLLVLLSS*YSVPGV Trigger: GACCCCTGGGACAGAATACAATGATGACAGGAGTAC...CAGAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTCTCAGCACTCTTCATGGTGGCTCACATGTATCTGTAACTCCAGTTCCAGGCAGATCCTTTCCTTaGTTTCCTTTGCCCGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SILSTLHGGSHVSVTPVPGRSFP*FPLPAG Trigger: TCCAGCGGGCAAAGGAAACAAAGGAAAGGATCTGCC...TGGAACTGGAGTTACAGATACATGTGAGCCACCATGAAGAGTGCTGAGAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTTCCATCACGAGATTATCCTGTTCACCTCACTGCTTCTCTCCTTATCGGCAGCGAGGGACTCTGTaGCAAAAACAAATGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: AASITRLSCSPHCFSPYRQRGTL*QKQMAM Trigger: CATAGCCATTTGTTTTTGCAACAGAGTCCCTCGCTG...CCGATAAGGAGAGAAGCAGTGAGGTGAACAGGATAATCTCGTGATGGAAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | TTGCCTCAAACTCAGAATCTGTCTCCCTCAAACTTCTaGGTGCTATGGTTACAGGTGTACACCACCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPQTQNLSPSNF*VLWLQVYTTMP Trigger: GGGCATGGTGGTGTACACCTGTAACCATAGCACTCAGAAGTTTGAGGGAGACAGATTCTGAGTTTGAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TTCTGCGGTCCAACTTTCCAGGAAGAAGCCAGAATTTaGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FCGPTFQEEARI*LPANQKGWTAV Trigger: TACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCTTCCTGGAAAGTTGGACCGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084525.12 ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TGCAATGCTGTGGTAAACATCACCTTTGGGGACAGCTaGCTCAAATCTAGGCTACACCACATAGGAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CNAVVNITFGDS*LKSRLHHIGTA Trigger: AGCAGTTCCTATGTGGTGTAGCCTAGATTTGAGCCAGCTGTCCCCAAAGGTGATGTTTACCACAGCATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATTTGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACACAGGTACTCCTGTCATCATaGTATTCTGTCCCAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QNLASSQSERLDSSNFTQVLLSS*YSVPGV Trigger: GACCCCTGGGACAGAATACAATGATGACAGGAGTAC...CTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCTTTGTGCTCTGGAGTTGGACACGTGGTTTCCTGGGTGTGAAAGCTCTGTGCCCTGTTCCTATTTaGAATTTCTTCTACATACTG | + |
|
Preference number: 3 (lower is better) Translates to: CTFVLWSWTRGFLGVKALCPVPI*NFFYIL Trigger: CAGTATGTAGAAGAAATTCAAAATAGGAACAGGGCA...CAGAGCTTTCACACCCAGGAAACCACGTGTCCAACTCCAGAGCACAAAGGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | GCAAAAACAAATGGCTATGGGTGTAGCTCAGTTGGTTaGGAGCTTGCCTCGTATGCCTTTCTAAGCTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AKTNGYGCSSVG*ELASYAFLSSR Trigger: CCTAGAGCTTAGAAAGGCATACGAGGCAAGCTCTCAACCAACTGAGCTACACCCATAGCCATTTGTTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | CTGGGTAAATCCCAGCTAAGGAGTTTCTTTGAAACTTaGTTCCAGATGTTCTGGCTTCCACAGCTGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGKSQLRSFFET*FQMFWLPQLVV Trigger: AACCACCAGCTGTGGAAGCCAGAACATCTGGAATCAAGTTTCAAAGAAACTCCTTAGCTGGGATTTACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | GGTTCTGTCCCTGGGTTTTATGGTAAAAATAGGGCATaGTATGAAAGTATCCAGAGCAGCTCTCAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSVPGFYGKNRA*YESIQSSSQMG Trigger: ACCCATCTGAGAGCTGCTCTGGATACTTTCATACCATGCCCTATTTTTACCATAAAACCCAGGGACAGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TCAAAGGAAATGAAGTATAATCCTGACACCTGGGTGTaGTGTTTACAGACACTCCACAGCTTCTGTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKEMKYNPDTWV*CLQTLHSFCLS Trigger: GGAGAGACAGAAGCTGTGGAGTGTCTGTAAACACCACACCCAGGTGTCAGGATTATACTTCATTTCCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | CCTAACTGTCTCAAAGCCATTGATAGTCAAGTGTGGTaGCACATACCTGTCCTTCCAGTGTTTGACGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNCLKAIDSQVW*HIPVLPVFDVE Trigger: TTCAACGTCAAACACTGGAAGGACAGGTATGTGTCACCACACTTGACTATCAATGGCTTTGAGACAGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | GCAAACTTGTTAGTTGGCTCAGAGGTTAAACAAACTTaGTGGTTGGCTCAGAGGTTGAACAAACTTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ANLLVGSEVKQT*WLAQRLNKLAG Trigger: ACCAGCAAGTTTGTTCAACCTCTGAGCCAACCACCAAGTTTGTTTAACCTCTGAGCCAACTAACAAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | GTTACAGGTGTACACCACCATGCCCTGTTCCTATTTTaGATTTCTTCTACATACTGGAGTTGTGGAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: VTGVHHHALFLF*ISSTYWSCGTH Trigger: ATGTGTTCCACAACTCCAGTATGTAGAAGAAATTCAAAATAGGAACAGGGCATGGTGGTGTACACCTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | AACTTGTTAGTTGGCTCAGAGGTTAAACAAACTTGGTaGTTGGCTCAGAGGTTGAACAAACTTGCTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NLLVGSEVKQTW*LAQRLNKLAGF Trigger: AAAACCAGCAAGTTTGTTCAACCTCTGAGCCAACCACCAAGTTTGTTTAACCTCTGAGCCAACTAACAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR TCA 72 bp | GTACTGATTATATTACACCTGAAGGCTTCAGGAAAATaGAAGGTCACTCTTCTGAATAAAGTGACCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLIILHLKASGK*KVTLLNKVTSW Trigger: CCAGGAGGTCACTTTATTCAGAAGAGTGACCTTTCATTTTCCTGAAGCCTTCAGGTGTAATATAATCAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CCA 72 bp | TGCAATAATAAAGAGTCTTATGTACAGCCTGTGTCTTaGGGGTTTTATTGTGTTCTAAGACAGGAAGATAAC | + |
|
Preference number: 3 (lower is better) Translates to: CNNKESYVQPVS*GFYCVLRQEDN Trigger: GTTATCTTCCTGTCTTAGAACACAATAAAACCCCCAAGACACAGGCTGTACATAAGACTCTTTATTATTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | GAGAGCAATGTAGTTGAGGCCATTAGGAGCATGGGATaGGAAAGCAGGTGGCTCCACAGCTCCCACTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESNVVEAIRSMG*ESRWLHSSHFV Trigger: CACGAAGTGGGAGCTGTGGAGCCACCTGCTTTCCAATCCCATGCTCCTAATGGCCTCAACTACATTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | AGGTGGGCCTGGGATTCTGCACAGCGAGGGACTCTGTaGCAAAAACAAATGGCTATGGGTGTAGCTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RWAWDSAQRGTL*QKQMAMGVAQL Trigger: CAACTGAGCTACACCCATAGCCATTTGTTTTTGCAACAGAGTCCCTCGCTGTGCAGAATCCCAGGCCCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTAATTTCACACAGAAGTCACCTCTCCCTGCAGGAGACAGAAAACCTTCTGTTTTGGGGTCACTGCTaGGCCCAGCAGCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVISHRSHLSLQETENLLFWGHC*AQQLLL Trigger: GAGAAGGAGCTGCTGGGCTCAGCAGTGACCCCAAAA...CAGAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| CDS-3UTR TCA 90 bp | GTAATTTCACACAGAAGTCACCTCTCCCTGCAGGAGACAGAAAACCTTCTGCTTTTTTGGGGTCACTGCTaGGCCCAGCAGCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VISHRSHLSLQETENLLLFWGHC*AQQLLL Trigger: GAGAAGGAGCTGCTGGGCTCAGCAGTGACCCCAAAA...AAGCAGAAGGTTTTCTGTCTCCTGCAGGGAGAGGTGACTTCTGTGTGAAATTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGAATTTGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGTAATTTCACACTTTTGGGGTCACTGCTaGGCCCAGCAGCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARIWLPANQKGWTAVISHFWGHC*AQQLLL Trigger: GAGAAGGAGCTGCTGGGCTCAGCAGTGACCCCAAAA...GTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | CTTCTGCGGTCCAACTTTCCAGGAAGAAGCCAGAATTaGGCTTCCAGCCAATCAGAAAGGTTGGACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFPGRSQN*ASSQSERLDSS Trigger: ACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCTTCCTGGAAAGTTGGACCGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084525.12 ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | AGAAGCCAGAATTTGGCTTCCAGCCAATCAGAAAGGTaGGACAGCAGTAATTTCACACAGAAGTCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSQNLASSQSER*DSSNFTQKSPL Trigger: GAGAGGTGACTTCTGTGTGAAATTACTGCTGTCCAACCTTTCTGATTGGCTGGAAGCCAAATTCTGGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084525.12 ENSMUST00000107459.2 ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | TCCTTTCCTTTGTTTCCTTTGCCCGCTGGAAGGCCTTaGCAGGCTGCAATAATAAAGAGTCTTATGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLFPLPAGRP*QAAIIKSLMYS Trigger: GCTGTACATAAGACTCTTTATTATTGCAGCCTGCAAAGGCCTTCCAGCGGGCAAAGGAAACAAAGGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | GTCAAGTGTGGTGACACATACCTGTCCTTCCAGTGTTaGACGTTGAAGCAGAATGATCATGAGGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VKCGDTYLSFQC*TLKQNDHEERP Trigger: AGGTCTTTCCTCATGATCATTCTGCTTCAACGTCAAACACTGGAAGGACAGGTATGTGTCACCACACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | CACATAGGAACTGCTATCCTAACTGTCTCAAAGCCATaGATAGTCAAGTGTGGTGACACATACCTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIGTAILTVSKP*IVKCGDTYLSF Trigger: GAAGGACAGGTATGTGTCACCACACTTGACTATCAATGGCTTTGAGACAGTTAGGATAGCAGTTCCTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | TTGTTAGTTGGCTCAGAGGTTAAACAAACTTGGTGGTaGGCTCAGAGGTTGAACAAACTTGCTGGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVGSEVKQTWW*AQRLNKLAGFA Trigger: TGCAAAACCAGCAAGTTTGTTCAACCTCTGAGCCAACCACCAAGTTTGTTTAACCTCTGAGCCAACTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | GGTTACAGGTGTACACCACCATGCCCTGTTCCTATTTaGAATTTCTTCTACATACTGGAGTTGTGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GYRCTPPCPVPI*NFFYILELWNT Trigger: TGTGTTCCACAACTCCAGTATGTAGAAGAAATTCAAAATAGGAACAGGGCATGGTGGTGTACACCTGTAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||
| 3UTR CAA 72 bp | TTTACTGTTTTGAGACAAGGTCAGTGTCACCTACGATaGCCTCAAACTCAGAATCTGTCTCCCTCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTVLRQGQCHLR*PQTQNLSPSNF Trigger: GAAGTTTGAGGGAGACAGATTCTGAGTTTGAGGCAATCGTAGGTGACACTGACCTTGTCTCAAAACAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134727.8 |
||