Pregenerated sensors for CDC25C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044201Ensembl transcript IDs: ENSMUST00000060710.9, ENSMUST00000237620.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTATTGTGGGCTCGCACCCTTCACCAGGAGGGCAATCTGTCCCTaGAGCTGCCGCTCCCCTTCCTGGGCCTTGCTCTGGCTTCGCCAG | + |
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Preference number: 1 (lower is better) Translates to: HYCGLAPFTRRAICP*SCRSPSWALLWLRQ Trigger: CTGGCGAAGCCAGAGCAAGGCCCAGGAAGGGGAGCGGCAGCTGCAGGGACAGATTGCCCTCCTGGTGAAGGGTGCGAGCCCACAATAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 90 bp | GATCACACTCTGGAACTTTCCAGACAGCAAAGCAGCCACTGTGTCTaGGCTGATATACTTCAGATCCGGGTGTTTCCCTGGCACCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: DHTLELSRQQSSHCV*ADILQIRVFPWHRW Trigger: CCAACGGTGCCAGGGAAACACCCGGATCTGAAGTATATCAGCCCAGACACAGTGGCTGCTTTGCTGTCTGGAAAGTTCCAGAGTGTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR TCA 90 bp | AGAGGAACAACAGGCTTCCTCAGAAAGAACTCATGCAGTTCCTTCTaGCTGTGCAGGTTTAAGGCTCCCAGGATGTGGCCTCCCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: RGTTGFLRKNSCSSF*LCRFKAPRMWPPRY Trigger: GTACCTGGGAGGCCACATCCTGGGAGCCTTAAACCTGCACAGTCAGAAGGAACTGCATGAGTTCTTTCTGAGGAAGCCTGTTGTTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 90 bp | CGTTCATGTCACAGAGTGGGACCATCTTCCTTAGACTTAAGCCCTTaGCGTCCTGGTCTCCCAGGGAACACTCCATTGGGTCTTCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: RSCHRVGPSSLDLSP*RPGLPGNTPLGLLK Trigger: TTTCAGAAGACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTTAAGTCTAAGGAAGATGGTCCCACTCTGTGACATGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 90 bp | CACCAATCAGAAGCTCTGAGCCAGACTCTTCCTCCTCCATCTGAATaGCGTTCATGTCACAGAGTGGGACCATCTTCCTTAGACTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: HQSEALSQTLPPPSE*RSCHRVGPSSLDLS Trigger: GCTTAAGTCTAAGGAAGATGGTCCCACTCTGTGACATGAACGCCATTCAGATGGAGGAGGAAGAGTCTGGCTCAGAGCTTCTGATTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR TCA 90 bp | CCAGGATGTGGCCTCCCAGGTACTCATACGGATAGCGGCAATCAATaGTATAAAACCTCTCGATCACACTCTGGAACTTTCCAGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: PGCGLPGTHTDSGNQ*YKTSRSHSGTFQTA Trigger: TGCTGTCTGGAAAGTTCCAGAGTGTGATCGAGAGGTTTTATATCATTGATTGCCGCTATCCGTATGAGTACCTGGGAGGCCACATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR GCA 90 bp | GGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTaGAGACATAATCACGGGATTAGCGACATGGAAGATGACTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GRKAFIYSLPGSAHV*RHNHGISDMEDDSF Trigger: GAAGGAGTCATCTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| 3UTR TCA 90 bp | ATTGGGTCTTCTGAAATCCTTTCTTGGTCTTCTAGCTTTACATTTTaGCTCAGCTTAGGAACCGTAGTAATGGGACTGCCCAGATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: IGSSEILSWSSSFTF*LSLGTVVMGLPRCF Trigger: GAAGCATCTGGGCAGTCCCATTACTACGGTTCCTAAGCTGAGTCAAAATGTAAAGCTAGAAGACCAAGAAAGGATTTCAGAAGACCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CAA 90 bp | GCGTTCATGTCACAGAGTGGGACCATCTTCCTTAGACTTAAGCCCTaGGCGTCCTGGTCTCCCAGGGAACACTCCATTGGGTCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: AFMSQSGTIFLRLKP*ASWSPREHSIGSSE Trigger: TTCAGAAGACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTTAAGTCTAAGGAAGATGGTCCCACTCTGTGACATGAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACCAATCAGAAGCTCTaGGCCAGACTCTTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ARTKGIYLQPAWLCPCLQTNQKL*ARLFLL Trigger: GAGGAGGAAGAGTCTGGCTCAGAGCTTCTGATTGGT...CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGGTGTTTCCCTGGCACCGTTGGCAGCACACACACCTTTGAGAAATCACCAAACTCAAAGATCCTCCTaGCTTTGCCTCCTTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PGVSLAPLAAHTPLRNHQTQRSS*LCLLSA Trigger: AGCACTAAGGAGGCAAAGGCAGGAGGATCTTTGAGT...TTGGTGATTTCTCAAAGGTGTGTGTGCTGCCAACGGTGCCAGGGAAACACCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGTATTTACAGCCTGCCTaGCTCTGCCCATGTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARTKGIYLQPAWLCPCLQYLQPA*LCPCLQ Trigger: CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATA...CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGCAGCACACACACCTTTaGGAAATCACCAATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ARTKGIYLQPAWLCPCLQQHTHL*EITNQK Trigger: CTTCTGATTGGTGATTTCTCAAAGGTGTGTGTGCTG...CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCCAGGTACTCATACGGATAGCGGCAATCAATGATATAAAACCTCTCGATAGATCCTCCTGCCTTTaGCTCCTTAGTGCTAGGACG | + |
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Preference number: 2 (lower is better) Translates to: ASQVLIRIAAINDIKPLDRSSCL*LLSART Trigger: CGTCCTAGCACTAAGGAGGCAAAGGCAGGAGGATCT...ATCGAGAGGTTTTATATCATTGATTGCCGCTATCCGTATGAGTACCTGGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTATGGGACTGCCCAGATaGTTCATTTCCAGCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: LVLGRKAFIYSLPGSAHVMGLPR*FISSSH Trigger: GTGTGAGCTGGAAATGAAGCATCTGGGCAGTCCCAT...AACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CAA 90 bp | TTAGACTTAAGCCCTTGGCGTCCTGGTCTCCCAGGGAACACTCCATaGGGTCTTCTGAAATCCTTTCTTGGTCTTCTAGCTTTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: LDLSPWRPGLPGNTP*GLLKSFLGLLALHF Trigger: AAAATGTAAAGCTAGAAGACCAAGAAAGGATTTCAGAAGACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTTAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCCAGGTACTCATACGGATAGCGGCAATCAATGATATAAAACCTCTCGATCTCCATTGGGTCTTCTaGAATCCTTTCTTGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASQVLIRIAAINDIKPLDLHWVF*NPFLVF Trigger: GAAGACCAAGAAAGGATTTCAGAAGACCCAATGGAG...ATCGAGAGGTTTTATATCATTGATTGCCGCTATCCGTATGAGTACCTGGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAATGATGACTCTTTTCTGGATATCCAGAGGAACAACAGGCTTCCTCAGAAGCAGCCACTGTGTCTaGGCTGATATACTTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: NTMMTLFWISRGTTGFLRSSHCV*ADILQI Trigger: GATCTGAAGTATATCAGCCCAGACACAGTGGCTGCT...TCTGAGGAAGCCTGTTGTTCCTCTGGATATCCAGAAAAGAGTCATCATTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 72 bp | CACAGAGTGGGACCATCTTCCTTAGACTTAAGCCCTTaGCGTCCTGGTCTCCCAGGGAACACTCCATTGGGT | + |
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Preference number: 3 (lower is better) Translates to: HRVGPSSLDLSP*RPGLPGNTPLG Trigger: ACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTTAAGTCTAAGGAAGATGGTCCCACTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 72 bp | CTGGAACTTTCCAGACAGCAAAGCAGCCACTGTGTCTaGGCTGATATACTTCAGATCCGGGTGTTTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LELSRQQSSHCV*ADILQIRVFPW Trigger: CCAGGGAAACACCCGGATCTGAAGTATATCAGCCCAGACACAGTGGCTGCTTTGCTGTCTGGAAAGTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR TCA 72 bp | ACAGGCTTCCTCAGAAAGAACTCATGCAGTTCCTTCTaGCTGTGCAGGTTTAAGGCTCCCAGGATGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: TGFLRKNSCSSF*LCRFKAPRMWP Trigger: AGGCCACATCCTGGGAGCCTTAAACCTGCACAGTCAGAAGGAACTGCATGAGTTCTTTCTGAGGAAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCAAACTCAAAGATCCTCCTaGCTTTGCCTCCTTAGTGCTAGGACGAAAGGCATT | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPQTQRSS*LCLLSARTKGI Trigger: AATGCCTTTCGTCCTAGCACTAAGGAGGCAAAGGCAGGAGGATCTTTGAGTTTGAGGCCAGCCTGGTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| 3UTR CCA 72 bp | GAAGCTCTGAGCCAGACTCTTCCTCCTCCATCTGAATaGCGTTCATGTCACAGAGTGGGACCATCTTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: EALSQTLPPPSE*RSCHRVGPSSL Trigger: TAAGGAAGATGGTCCCACTCTGTGACATGAACGCCATTCAGATGGAGGAGGAAGAGTCTGGCTCAGAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR CCA 72 bp | CTGGTGGTCCTGGTGAAGCATGGGACAGTAGCTCTGTaGGTCACACAGCTCCATATACTCTGGAAAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: LVVLVKHGTVAL*VTQLHILWKEI Trigger: GATTTCTTTCCAGAGTATATGGAGCTGTGTGACCCACAGAGCTACTGTCCCATGCTTCACCAGGACCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR GCA 72 bp | CTCAGCTTAGGAACCGTAGTAATGGGACTGCCCAGATaGTTCATTTCCAGCTCACACAGAGGAGAAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LSLGTVVMGLPR*FISSSHRGEVR Trigger: TCTGACTTCTCCTCTGTGTGAGCTGGAAATGAAGCATCTGGGCAGTCCCATTACTACGGTTCCTAAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCAAACTCAAAGATCCTCCTGCCTTTaGCTCCTTAGTGCTAGGACGAAAGGCATTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: PGWPQTQRSSCL*LLSARTKGIYL Trigger: TAAATAAATGCCTTTCGTCCTAGCACTAAGGAGGCAAAGGCAGGAGGATCTTTGAGTTTGAGGCCAGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| 3UTR TCA 72 bp | GGCCTCCCAGGTACTCATACGGATAGCGGCAATCAATaGTATAAAACCTCTCGATCACACTCTGGAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: GLPGTHTDSGNQ*YKTSRSHSGTF Trigger: GAAAGTTCCAGAGTGTGATCGAGAGGTTTTATATCATTGATTGCCGCTATCCGTATGAGTACCTGGGAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR GCA 72 bp | GCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTaGAGACATAATCACGGGATTAGCGACATGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: AFIYSLPGSAHV*RHNHGISDMED Trigger: ATCTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTACTCATACGGATAGCGGCAATCAATGATATAAAACCTCTCGATCACACTCCAGGGAACACTCCATaGGGTCTTCTGAAATCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QVLIRIAAINDIKPLDHTPGNTP*GLLKSF Trigger: AAAGGATTTCAGAAGACCCAATGGAGTGTTCCCTGG...AGTGTGATCGAGAGGTTTTATATCATTGATTGCCGCTATCCGTATGAGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| 3UTR TCA 72 bp | TCTGAAATCCTTTCTTGGTCTTCTAGCTTTACATTTTaGCTCAGCTTAGGAACCGTAGTAATGGGACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: SEILSWSSSFTF*LSLGTVVMGLP Trigger: GGGCAGTCCCATTACTACGGTTCCTAAGCTGAGTCAAAATGTAAAGCTAGAAGACCAAGAAAGGATTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR CCA 90 bp | TGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAAGAAGCCCTTGGCGTCCTaGTCTCCCAGGGAACACTCC | + |
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Preference number: 4 (lower is better) Translates to: CLALPMFADIITGLATWKKPLAS*SPREHS Trigger: GGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTT...CTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | AGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGATCCGGGTGTTTCCCTaGCACCGTTGGCAGCACACA | + |
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Preference number: 4 (lower is better) Translates to: SLPGSAHVCRHNHGISDMIRVFP*HRWQHT Trigger: TGTGTGCTGCCAACGGTGCCAGGGAAACACCCGGAT...CATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | TTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCCGCTCCCCTTCCTaGGCCTTGCTCTGGCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: LVLGRKAFIYSLPGSAHVCRSPS*ALLWLR Trigger: GCGAAGCCAGAGCAAGGCCCAGGAAGGGGAGCGGCA...AACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| 3UTR CAA 72 bp | TCACAGAGTGGGACCATCTTCCTTAGACTTAAGCCCTaGGCGTCCTGGTCTCCCAGGGAACACTCCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: SQSGTIFLRLKP*ASWSPREHSIG Trigger: CCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCTTAAGTCTAAGGAAGATGGTCCCACTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR TCA 90 bp | ATTGTGGGCTCGCACCCTTCACCAGGAGGGCAATCTGTCCCTGCAGCTGCCGCTTTCATAAGGTCCTGGTaGAAATCCTTGCCAGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: IVGSHPSPGGQSVPAAAAFIRSW*KSLPVN Trigger: GTTAACTGGCAAGGATTTTCACCAGGACCTTATGAA...AGCGGCAGCTGCAGGGACAGATTGCCCTCCTGGTGAAGGGTGCGAGCCCACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR TCA 90 bp | AGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGACCAATCAGAAGCTCTaGGCCAGACTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLPGSAHVCRHNHGISDMTNQKL*ARLFLL Trigger: GAGGAGGAAGAGTCTGGCTCAGAGCTTCTGATTGGT...CATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCAGGGCAATCTGTCCCTaGAGCTGCCGCTCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIIRAICP*SCRSPS Trigger: GGAAGGGGAGCGGCAGCTGCAGGGACAGATTGCCCT...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| 3UTR CAA 72 bp | AGCCCTTGGCGTCCTGGTCTCCCAGGGAACACTCCATaGGGTCTTCTGAAATCCTTTCTTGGTCTTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPWRPGLPGNTP*GLLKSFLGLLA Trigger: AGCTAGAAGACCAAGAAAGGATTTCAGAAGACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR GCA 90 bp | CCTCCTGCCTTTGCCTCCTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTTGGGGTCCTAGGTaGCTCCCATTCCAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PPAFASLVLGRKAFIYSLPWGPR*LPFQCL Trigger: AAGGCATTGGAATGGGAGGCACCTAGGACCCCAAGG...CAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAGGAGGCAAAGGCAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | ATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCAAGGCTCCCAGGATGTaGCCTCCCAGGTACTCATAC | + |
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Preference number: 4 (lower is better) Translates to: IYSLPGSAHVCRHNHGISKAPRM*PPRYSY Trigger: GTATGAGTACCTGGGAGGCCACATCCTGGGAGCCTT...GCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | CTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTGGTCCTGGTGAAGCATaGGACAGTAGCTCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSARTKGIYLQPAWLCPCGPGEA*DSSSVG Trigger: ACCCACAGAGCTACTGTCCCATGCTTCACCAGGACC...ACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR GCA 90 bp | AGCCCTTGGCGTCCTGGTCTCCCAGGGAACACTCCATTGGGTCTTCTGAAATCCGAGAAGCAGGAACGCTaGATTTTCTTTATGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPWRPGLPGNTPLGLLKSEKQER*IFFMCR Trigger: TCTGCACATAAAGAAAATGCAGCGTTCCTGCTTCTC...GGATTTCAGAAGACCCAATGGAGTGTTCCCTGGGAGACCAGGACGCCAAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACAAGCAGCCACTGTGTCTaGGCTGATATACTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: TACLALPMFADIITGLATSSHCV*ADILQI Trigger: GATCTGAAGTATATCAGCCCAGACACAGTGGCTGCT...TGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | AGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGCTCCATTGGGTCTTCTaGAATCCTTTCTTGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLPGSAHVCRHNHGISDMLHWVF*NPFLVF Trigger: GAAGACCAAGAAAGGATTTCAGAAGACCCAATGGAG...CATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | GCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGTCATGCAGTTCCTTCTaGCTGTGCAGGTTTAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ARTKGIYLQPAWLCPCLQSCSSF*LCRFKA Trigger: AGCCTTAAACCTGCACAGTCAGAAGGAACTGCATGA...CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | CCTCCTGCCTTTGCCTCCTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCTCTGTAGCCCCCTTTaGGGATATATAGCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PPAFASLVLGRKAFIYSLLCSPL*GYIAQG Trigger: ACCCTGAGCTATATATCCTCAAAGGGGGCTACAGAG...CAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAGGAGGCAAAGGCAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | CTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAACCTAAAACTGGGTGCTaGAACAAAACTTCCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPGSAHVCRHNHGISDMEPKTGC*NKTSLF Trigger: GAAGAGGGAAGTTTTGTTTCAGCACCCAGTTTTAGG...TTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR TCA 90 bp | TGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAAGCAGCACACACACCTTTaGGAAATCACCAATCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLALPMFADIITGLATWKQHTHL*EITNQK Trigger: CTTCTGATTGGTGATTTCTCAAAGGTGTGTGTGCTG...CTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR GCA 90 bp | TGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAAGAGATGTGCTACGCTTTaGAATCTTCTTTCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLALPMFADIITGLATWKRCATL*NLLSVA Trigger: GGCCACAGAAAGAAGATTGCAAAGCGTAGCACATCT...CTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCCCTGTCTTTTTCTCTCAGAGAACGGCACATTCGAGGGCCTCTCTCGGATGCATTTTCTTTATGTaGAGATGTGCTACGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSPVFFSQRTAHSRASLGCIFFM*RCATLC Trigger: GCAAAGCGTAGCACATCTGCACATAAAGAAAATGCA...TCCGAGAGAGGCCCTCGAATGTGCCGTTCTCTGAGAGAAAAAGACAGGGCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACACAGCTCCATATACTCTaGAAAGAAATCTCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TACLALPMFADIITGLATQLHIL*KEISVA Trigger: GGCTACAGAGATTTCTTTCCAGAGTATATGGAGCTG...TGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | TTCACAGAGGAACACAATGATGACTCTTTTCTGGATATCCAGAGGAACAACAGGCCCGCGTCAATCAGCTaGAGGGAGAGAAGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FTEEHNDDSFLDIQRNNRPASIS*RERSRN Trigger: GTTCCTGCTTCTCTCCCTCCAGCTGATTGACGCGGG...CCTGTTGTTCCTCTGGATATCCAGAAAAGAGTCATCATTGTGTTCCTCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR GCA 90 bp | ATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCAGATGTGCTACGCTTTaGAATCTTCTTTCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IYSLPGSAHVCRHNHGISRCATL*NLLSVA Trigger: GGCCACAGAAAGAAGATTGCAAAGCGTAGCACATCT...GCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCATGGGACTGCCCAGATaGTTCATTTCCAGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIIMGLPR*FISSSH Trigger: GTGTGAGCTGGAAATGAAGCATCTGGGCAGTCCCAT...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCCCTAAAACTGGGTGCTaGAACAAAACTTCCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIIPKTGC*NKTSLF Trigger: GAAGAGGGAAGTTTTGTTTCAGCACCCAGTTTTAGG...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTTCATAAGGTCCTGGTaGAAATCCTTGCCAGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: LVLGRKAFIYSLPGSAHVFIRSW*KSLPVN Trigger: GTTAACTGGCAAGGATTTTCACCAGGACCTTATGAA...AACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCCTCTCGATCACACTCTaGAACTTTCCAGACAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIILSITL*NFPDSK Trigger: TTTGCTGTCTGGAAAGTTCCAGAGTGTGATCGAGAG...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCCCTGGTGAAAATCCTTaGCAGTTAACTGTCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIIPGENP*QLTVYP Trigger: TGGATAGACAGTTAACTGGCAAGGATTTTCACCAGG...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR GCA 90 bp | AAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACCCTGGTGAAAATCCTTaGCAGTTAACTGTCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: KAFIYSLPGSAHVCRHNHPGENP*QLTVYP Trigger: TGGATAGACAGTTAACTGGCAAGGATTTTCACCAGG...GTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR CCA 90 bp | CTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTATGATGACTCTTTTCTaGATATCCAGAGGAACAACA | + |
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Preference number: 4 (lower is better) Translates to: LSARTKGIYLQPAWLCPCMMTLF*ISRGTT Trigger: TGTTGTTCCTCTGGATATCCAGAAAAGAGTCATCAT...ACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR TCA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCTCTAGCTTTACATTTTaGCTCAGCTTAGGAACCGTA | + |
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Preference number: 4 (lower is better) Translates to: ERHLFTACLALPMFADIISSFTF*LSLGTV Trigger: TACGGTTCCTAAGCTGAGTCAAAATGTAAAGCTAGA...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR GCA 90 bp | CTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTATATTTTCTTTATGTaGAGATGTGCTACGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSARTKGIYLQPAWLCPCYIFFM*RCATLC Trigger: GCAAAGCGTAGCACATCTGCACATAAAGAAAATATA...ACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CCA 90 bp | TTCACAGAGGAACACAATGATGACTCTTTTCTGGATATCCAGAGGAACAACAGGCCAATGCCTTTAAACTaGTGTTTATCTGCACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FTEEHNDDSFLDIQRNNRPMPLN*CLSAQE Trigger: TTCTTGTGCAGATAAACACCAGTTTAAAGGCATTGG...CCTGTTGTTCCTCTGGATATCCAGAAAAGAGTCATCATTGTGTTCCTCTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGACGAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGTCCCCTTCCTGGGCCTaGCTCTGGCTTCGCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARTKGIYLQPAWLCPCLQSPSWA*LWLRQL Trigger: GAGCTGGCGAAGCCAGAGCAAGGCCCAGGAAGGGGA...CTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTCGTCCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CAA 90 bp | CTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAAGTTTCCCTGGCACCGTaGGCAGCACACACACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LPGSAHVCRHNHGISDMEVSLAP*AAHTPL Trigger: CAAAGGTGTGTGTGCTGCCAACGGTGCCAGGGAAAC...TTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS-3UTR CAA 90 bp | TGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAAGCAGATGTGCTACGCTTaGCAATCTTCTTTCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: CLALPMFADIITGLATWKQMCYA*QSSFCG Trigger: GCCACAGAAAGAAGATTGCAAAGCGTAGCACATCTG...CTTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGGCTCTGCCCATGTTTGCAGACATAATCACGGGATTAGCGACATGGAACCAGGGAACACTCCATaGGGTCTTCTGAAATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LPGSAHVCRHNHGISDMEPGNTP*GLLKSF Trigger: AAAGGATTTCAGAAGACCCAATGGAGTGTTCCCTGG...TTCCATGTCGCTAATCCCGTGATTATGTCTGCAAACATGGGCAGAGCCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS GCA 90 bp | GATTCGAAAGGTCAAGGCAACATTTTGGGGTTCCTCCCGACAGAATaGTTAGGTTTGCCGAGTCGTGGAGTTTGTCTTTCGGAGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: DSKGQGNILGFLPTE*LGLPSRGVCLSEIQ Trigger: CTGAATCTCCGAAAGACAAACTCCACGACTCGGCAAACCTAAGCATTCTGTCGGGAGGAACCCCAAAATGTTGCCTTGACCTTTCGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCCTTTGCCTCCTTAGTGCTAGGACGAAAGGCATTTATTTACAGCCTGGAATCCAAGGAACCATaGTCCTCAAGGTCAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PPAFASLVLGRKAFIYSLESKEP*SSRSAE Trigger: TTCTGCTGACCTTGAGGACAATGGTTCCTTGGATTC...CAGGCTGTAAATAAATGCCTTTCGTCCTAGCACTAAGGAGGCAAAGGCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS-3UTR CAA 90 bp | ACCGTTGGCAGCACACACACCTTTGAGAAATCACCAATCAGAAGCTCTGAGCCAGAATCCAAGGAACCATaGTCCTCAAGGTCAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TVGSTHTFEKSPIRSSEPESKEP*SSRSAE Trigger: TTCTGCTGACCTTGAGGACAATGGTTCCTTGGATTC...TGGCTCAGAGCTTCTGATTGGTGATTTCTCAAAGGTGTGTGTGCTGCCAACGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS CCA 90 bp | TTAAACTGGTGTTTATCTGCACAAGAAGGACCCGCGTCAATCAGCTaGAGGGAGAGAAGCAGGAACGCTGCATTTTCTTTATGTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LNWCLSAQEGPASIS*RERSRNAAFSLCAD Trigger: ATCTGCACATAAAGAAAATGCAGCGTTCCTGCTTCTCTCCCTCCAGCTGATTGACGCGGGTCCTTCTTGTGCAGATAAACACCAGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGCATTTATTTACAGCCTGCCTGGCTCTGCCCATGTTTGCAGACATAATCGCAGCACACACACCTTaGAGAAATCACCAATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: ERHLFTACLALPMFADIIAAHTP*RNHQSE Trigger: TTCTGATTGGTGATTTCTCAAAGGTGTGTGTGCTGC...GATTATGTCTGCAAACATGGGCAGAGCCAGGCAGGCTGTAAATAAATGCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060710.9 |
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| CDS GCA 90 bp | AAGCAGGAACGCTGCATTTTCTTTATGTGCAGATGTGCTACGCTTTaGAATCTTCTTTCTGTGGCCATGATTCATAGCATTCGGAGTACT | + |
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Preference number: 5 (lower is better) Translates to: KQERCIFFMCRCATL*NLLSVAMIHSIRST Trigger: AGTACTCCGAATGCTATGAATCATGGCCACAGAAAGAAGATTGCAAAGCGTAGCACATCTGCACATAAAGAAAATGCAGCGTTCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS TCA 90 bp | TTATGTGCAGATGTGCTACGCTTTGCAATCTTCTTTCTGTGGCCATaGTTCATAGCATTCGGAGTACTACAAAGAAGCTGTACTGGGATA | + |
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Preference number: 5 (lower is better) Translates to: LCADVLRFAIFFLWP*FIAFGVLQRSCTGI Trigger: TATCCCAGTACAGCTTCTTTGTAGTACTCCGAATGCTATGAATCATGGCCACAGAAAGAAGATTGCAAAGCGTAGCACATCTGCACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS GCA 72 bp | GGTCAAGGCAACATTTTGGGGTTCCTCCCGACAGAATaGTTAGGTTTGCCGAGTCGTGGAGTTTGTCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: GQGNILGFLPTE*LGLPSRGVCLS Trigger: CGAAAGACAAACTCCACGACTCGGCAAACCTAAGCATTCTGTCGGGAGGAACCCCAAAATGTTGCCTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS CAA 72 bp | CCCGACAGAATGCTTAGGTTTGCCGAGTCGTGGAGTTaGTCTTTCGGAGATTCAGGGAAATCTGAACGGATG | + |
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Preference number: 6 (lower is better) Translates to: PDRMLRFAESWS*SFGDSGKSERM Trigger: CATCCGTTCAGATTTCCCTGAATCTCCGAAAGACAAACTCCACGACTCGGCAAACCTAAGCATTCTGTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS CCA 72 bp | GTTCCTCCCGACAGAATGCTTAGGTTTGCCGAGTCGTaGAGTTTGTCTTTCGGAGATTCAGGGAAATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VPPDRMLRFAES*SLSFGDSGKSE Trigger: TTCAGATTTCCCTGAATCTCCGAAAGACAAACTCCACGACTCGGCAAACCTAAGCATTCTGTCGGGAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS CCA 72 bp | TGTTTATCTGCACAAGAAGGACCCGCGTCAATCAGCTaGAGGGAGAGAAGCAGGAACGCTGCATTTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CLSAQEGPASIS*RERSRNAAFSL Trigger: TAAAGAAAATGCAGCGTTCCTGCTTCTCTCCCTCCAGCTGATTGACGCGGGTCCTTCTTGTGCAGATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS CAA 72 bp | AACATTTTGGGGTTCCTCCCGACAGAATGCTTAGGTTaGCCGAGTCGTGGAGTTTGTCTTTCGGAGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: NILGFLPTECLG*PSRGVCLSEIQ Trigger: CTGAATCTCCGAAAGACAAACTCCACGACTCGGCAAACCTAAGCATTCTGTCGGGAGGAACCCCAAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS GCA 72 bp | GAGGGAGAGAAGCAGGAACGCTGCATTTTCTTTATGTaGAGATGTGCTACGCTTTGCAATCTTCTTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EGEKQERCIFFM*RCATLCNLLSV Trigger: CACAGAAAGAAGATTGCAAAGCGTAGCACATCTGCACATAAAGAAAATGCAGCGTTCCTGCTTCTCTCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237620.2 |
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| CDS TCA 72 bp | GATGTGCTACGCTTTGCAATCTTCTTTCTGTGGCCATaGTTCATAGCATTCGGAGTACTACAAAGAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DVLRFAIFFLWP*FIAFGVLQRSC Trigger: ACAGCTTCTTTGTAGTACTCCGAATGCTATGAATCATGGCCACAGAAAGAAGATTGCAAAGCGTAGCACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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| CDS CCA 72 bp | ATTCATAGCATTCGGAGTACTACAAAGAAGCTGTACTaGGATACCTTTCATAAGGTCCTGGTGAAAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: IHSIRSTTKKLY*DTFHKVLVKIL Trigger: AAGGATTTTCACCAGGACCTTATGAAAGGTATCCCAGTACAGCTTCTTTGTAGTACTCCGAATGCTATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060710.9 ENSMUST00000237620.2 |
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