Pregenerated sensors for CDC25B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027330Ensembl transcript IDs: ENSMUST00000028804.15, ENSMUST00000079857.9
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAGGGAAGGGCAGAGAAGGATCAAACAGCAAAGCTCGGTGACTaGTCCATTGCCCAGCAGCAAGTGCTGACCAGCGAGGCTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: KQGRAEKDQTAKLGD*SIAQQQVLTSEALG Trigger: CCCCAGAGCCTCGCTGGTCAGCACTTGCTGCTGGGCAATGGACCAGTCACCGAGCTTTGCTGTTTGATCCTTCTCTGCCCTTCCCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR TCA 90 bp | AGGAAAACAGGGAAGGGCAGAGAAGGATCAAACAGCAAAGCTCGGTaGCTGGTCCATTGCCCAGCAGCAAGTGCTGACCAGCGAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RKTGKGREGSNSKAR*LVHCPAASADQRGS Trigger: AGAGCCTCGCTGGTCAGCACTTGCTGCTGGGCAATGGACCAGTCACCGAGCTTTGCTGTTTGATCCTTCTCTGCCCTTCCCTGTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 90 bp | ACAGAAGAGAAAGCACTTATGCTTCCAATGGAGAGCATAAGTCTATaGAGTGGCCAGGAGAGGAGAGTAGACACAGCCCTGTGTAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TEEKALMLPMESISL*SGQERRVDTALCSR Trigger: TCTGCTACACAGGGCTGTGTCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGCTTTCTCTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 90 bp | ACTTTGTTCACACGCGCACACACACACTCCTGCCATAGGCCATCATaGTTACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATA | + |
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Preference number: 1 (lower is better) Translates to: TLFTRAHTHSCHRPS*LPKYLDPVCVHTCI Trigger: TATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGTGTGTGTGTGCGCGTGTGAACAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 90 bp | ACACTAAGTGTAATGACTTTGTTCACACGCGCACACACACACTCCTaGCATAGGCCATCATGCTTACCAAAATACTTGGACCCGGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: TLSVMTLFTRAHTHS*HRPSCLPKYLDPVC Trigger: ACAAACCGGGTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGTGTGTGTGTGCGCGTGTGAACAAAGTCATTACACTTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR CCA 90 bp | CACACACACACTCCTGCCATAGGCCATCATGCTTACCAAAATACTTaGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATC | + |
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Preference number: 1 (lower is better) Translates to: HTHTPAIGHHAYQNT*TRFVCIHVYKALCI Trigger: GATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTTATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGGCCTCACAGGCCCATaGGACCCACTGGCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ALMLPMESISLCSGQERRGLTGP*DPLAPK Trigger: CTTGGGAGCCAGTGGGTCCCATGGGCCTGTGAGGCC...TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACGTGAGACAGGAAAATTaGGGACAGGGGCAGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDVRQEN*GQGQTD Trigger: ATCTGTCTGCCCCTGTCCTCAATTTTCCTGTCTCAC...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGCCATCCTGTGACACCACACCATaGCCCCAACCCCCTATAGCA | + |
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Preference number: 2 (lower is better) Translates to: CSRVASCIQAMQEATVPSCDTTP*PQPPIA Trigger: TGCTATAGGGGGTTGGGGGCATGGTGTGGTGTCACA...GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CCA 90 bp | ACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGGCAGAGGCCTCACAGGCCCATaGGACCCACTGGCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TYKRSSGPDIERKTGKGRGLTGP*DPLAPK Trigger: CTTGGGAGCCAGTGGGTCCCATGGGCCTGTGAGGCC...TCTGCCCTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR TCA 90 bp | AACCACACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGCCCAGCAGCAAGTGCTaGCCAGCGAGGCTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: NHTYKRSSGPDIERKTGKPSSKC*PARLWG Trigger: ACCCCAGAGCCTCGCTGGTCAGCACTTGCTGCTGGG...CTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGTGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGCCATCCAGACTTCTCCTCAGCTaGCATCCACCCTCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: CSRVASCIQAMQEATVPSRLLLS*HPPSGS Trigger: TGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCT...GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCCCCAGCAGCAAGTGCTaGCCAGCGAGGCTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: YQNTWTRFVCIHVYKALCPSSKC*PARLWG Trigger: ACCCCAGAGCCTCGCTGGTCAGCACTTGCTGCTGGG...GCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTTGTGACACCACACCATaGCCCCAACCCCCTATAGCA | + |
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Preference number: 2 (lower is better) Translates to: RFSSLSWDQYQDTENKWSCDTTP*PQPPIA Trigger: TGCTATAGGGGGTTGGGGGCATGGTGTGGTGTCACA...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR GCA 90 bp | ACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGGCAGAGAGAGCATAAGTCTATaGAGTGGCCAGGAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TYKRSSGPDIERKTGKGRESISL*SGQERR Trigger: TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTC...TCTGCCCTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR GCA 90 bp | AACCACACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGAGAGCATAAGTCTATaGAGTGGCCAGGAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NHTYKRSSGPDIERKTGKESISL*SGQERR Trigger: TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTC...CTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGTGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CCA 90 bp | AACCACACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGCATAAGTCTATGCAGTaGCCAGGAGAGGAGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: NHTYKRSSGPDIERKTGKHKSMQ*PGEESR Trigger: TCTACTCTCCTCTCCTGGCCACTGCATAGACTTATG...CTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGTGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACAGTGAGACAGGAAAATaGAGGACAGGGGCAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDSETGK*RTGADR Trigger: TCTGTCTGCCCCTGTCCTCAATTTTCCTGTCTCACT...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | AGAGTAGACACAGCCCTGTGTAGCAGAGTAGCATCCTaGATCCAGGCCATGCAAGAAGCTACTGTGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: RVDTALCSRVAS*IQAMQEATVPS Trigger: GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACACAGGGCTGTGTCTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR-3UTR CAA 90 bp | CCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTAGTGAGACAGGAAAATaGAGGACAGGGGCAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: PTEHNRLLLSWHPPSGSASETGK*RTGADR Trigger: TCTGTCTGCCCCTGTCCTCAATTTTCCTGTCTCACT...AGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | ACACGCGCACACACACACTCCTGCCATAGGCCATCATaGTTACCAAAATACTTGGACCCGGTTTGTGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TRAHTHSCHRPS*LPKYLDPVCVH Trigger: ATGCACACAAACCGGGTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGTGTGTGTGTGCGCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | AAAGCACTTATGCTTCCAATGGAGAGCATAAGTCTATaGAGTGGCCAGGAGAGGAGAGTAGACACAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: KALMLPMESISL*SGQERRVDTAL Trigger: CAGGGCTGTGTCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR CCA 72 bp | CAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAGCTaGGACCAGTACCAAGATACAGAAAATAAGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: QLASTLRFSSLS*DQYQDTENKWS Trigger: ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCTGAGGGTGGATGCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | ACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTaGATCCATGACCATGCAACAAAGGGCCTAGACTCA | + |
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Preference number: 3 (lower is better) Translates to: TRFVCIHVYKAL*IHDHATKGLDS Trigger: TGAGTCTAGGCCCTTTGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | GTAATGACTTTGTTCACACGCGCACACACACACTCCTaGCATAGGCCATCATGCTTACCAAAATACTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: VMTLFTRAHTHS*HRPSCLPKYLD Trigger: GTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGTGTGTGTGTGCGCGTGTGAACAAAGTCATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR CCA 72 bp | ACTCCTGCCATAGGCCATCATGCTTACCAAAATACTTaGACCCGGTTTGTGTGCATACATGTATATAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TPAIGHHAYQNT*TRFVCIHVYKA Trigger: TGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTAAGCATGATGGCCTATGGCAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| 3UTR GCA 72 bp | CATCATGCTTACCAAAATACTTGGACCCGGTTTGTGTaGATACATGTATATAAGGCACTGTGCATCCATGAC | + |
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Preference number: 3 (lower is better) Translates to: HHAYQNTWTRFV*IHVYKALCIHD Trigger: GTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTAAGCATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | GACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAGCTGGGACCAGTGCGCTCTGCCATCTaGGGGTCCACAGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DFSSAGIHPQVQLFKLGPVRSAI*GSTGLG Trigger: CCCCAGCCCTGTGGACCCGCAGATGGCAGAGCGCAC...TGGTCCCAGCTTAAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACTTCCTGCGCTTGCTCTaGACAGGCACATCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDFLRLL*TGTSRS Trigger: GGACCGGGATGTGCCTGTCCAGAGCAAGCGCAGGAA...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | GAATCTCTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGTGGGCAGAGCTGGAATaGGGGAGCTCCTGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: ESLAPSCTRKPPQRSVCQWAELE*GSSCGI Trigger: GATGCCACAGGAGCTCCCTCATTCCAGCTCTGCCCA...CTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAGAGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR GCA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACTGGGTCGGATCACACTaGATGGCATGGATGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDWVGSH*MAWMGS Trigger: GCTCCCCATCCATGCCATGCAGTGTGATCCGACCCA...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACGGGGTAGTCGTTAGCTaGACGGTCCCGTTCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDGVVVS*TVPFPD Trigger: ATCAGGGAACGGGACCGTGCAGCTAACGACTACCCC...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGCCATCCGCGGGTCCACAGGGCTaGGGGAGTCCATGCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: CSRVASCIQAMQEATVPSAGPQG*GSPCTD Trigger: GTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGC...GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACTCTGCCAGCCTGTTCTaGAACGACAGGCTTCCTACT | + |
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Preference number: 4 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDSASLF*NDRLPT Trigger: AGTAGGAAGCCTGTCGTTCCAGAACAGGCTGGCAGA...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GCACTTATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGCGGGTCCACAGGGCTaGGGGAGTCCATGCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: ALMLPMESISLCSGQERRAGPQG*GSPCTD Trigger: GTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGC...TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | CCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTAAGCCTCGTGGTTCATaGGTCGGTAGTCCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PTEHNRLLLSWHPPSGSAKPRGS*VGSPGA Trigger: AGCCCCAGGACTACCGACCCATGAACCACGAGGCTT...AGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | TGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGCCATCCACCCGACTGGCTGCCTaGATGGCCTGTTCAAACGTG | + |
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Preference number: 4 (lower is better) Translates to: CSRVASCIQAMQEATVPSTRLAA*MACSNV Trigger: CACGTTTGAACAGGCCATTCAGGCAGCCAGTCGGGT...GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GCACTTATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGCTGAGCTGGGCCTCTaGGTAAAGGCCTGTCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: ALMLPMESISLCSGQERRAELGL*VKACLR Trigger: CCGCAGACAGGCCTTTACCCAGAGGCCCAGCTCAGC...TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR CCA 90 bp | GAATCTCTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGGAGCGGAAGAGCCTCTaGCACTTGCTGAACATGATG | + |
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Preference number: 4 (lower is better) Translates to: ESLAPSCTRKPPQRSVCQERKSL*HLLNMM Trigger: CATCATGTTCAGCAAGTGCCAGAGGCTCTTCCGCTC...CTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAGAGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GAACCAAGGCCCCCAACAGAGGACTCATTGGGGCCTTCCAGCATATGTAGATTCTCACACTGCATGGCATaGATGGGGAGCGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EPRPPTEDSLGPSSICRFSHCMA*MGSGRA Trigger: GGCTCTTCCGCTCCCCATCCATGCCATGCAGTGTGA...GAATCTACATATGCTGGAAGGCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCTTCCTGCGCTTGCTCTaGACAGGCACATCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGFLRLL*TGTSRS Trigger: GGACCGGGATGTGCCTGTCCAGAGCAAGCGCAGGAA...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCACCCGACTGGCTGCCTaGATGGCCTGTTCAAACGTG | + |
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Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGTRLAA*MACSNV Trigger: CACGTTTGAACAGGCCATTCAGGCAGCCAGTCGGGT...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAGTGCGCTCTGCCATCTaGGGGTCCACAGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RFVCIHVYKALCIHDHATVRSAI*GSTGLG Trigger: CCCCAGCCCTGTGGACCCGCAGATGGCAGAGCGCAC...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | GTAAAAGGACTCCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTGCGGCTGACCCATTCTaGCAAAGCTTGGGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VKGLPLNTTDFSSAGIHPAADPF*QSLGRA Trigger: AGCTCTGCCCAAGCTTTGGCAGAATGGGTCAGCCGC...AGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGGAGTCCTTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR GCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCGGGGTAGTCGTTAGCTaGACGGTCCCGTTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGGVVVS*TVPFPD Trigger: ATCAGGGAACGGGACCGTGCAGCTAACGACTACCCC...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCTCCTCAGCTCATCCCTaGAAGCCTCGTGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGSSAHP*KPRGSW Trigger: CCATGAACCACGAGGCTTTCAGGGATGAGCTGAGGA...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | GTAAAAGGACTCCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTTCCTCAGCTCATCCCTaGAAGCCTCGTGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGLPLNTTDFSSAGIHPSSAHP*KPRGSW Trigger: CCATGAACCACGAGGCTTTCAGGGATGAGCTGAGGA...AGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGGAGTCCTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | GCACTTATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGATGGGTCGGATCACACTaGATGGCATGGATGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALMLPMESISLCSGQERRWVGSH*MAWMGS Trigger: GCTCCCCATCCATGCCATGCAGTGTGATCCGACCCA...TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCGGCATGATGGGACGCTaGAGCAGAAAGGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGGMMGR*SRKVSA Trigger: TGCTGAGACCTTTCTGCTGCAGCGTCCCATCATGCC...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGCCATCCGAGCGGAAGAGCCTCTaGCACTTGCTGAACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: CSRVASCIQAMQEATVPSERKSL*HLLNMM Trigger: CATCATGTTCAGCAAGTGCCAGAGGCTCTTCCGCTC...GGATGGCACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | GAACCAAGGCCCCCAACAGAGGACTCATTGGGGCCTTCCAGCATATGTAGATTCTCTCCACGATGTTGCTaGACTTGCCTGTTAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPRPPTEDSLGPSSICRFSPRCC*TCLLTG Trigger: CCCTGTTAACAGGCAAGTTCAGCAACATCGTGGAGA...GAATCTACATATGCTGGAAGGCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | GAACCAAGGCCCCCAACAGAGGACTCATTGGGGCCTTCCAGCATATGTAGATTCAATGACCCGACTGGCTaGCTGAATGGCCTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPRPPTEDSLGPSSICRFNDPTG*LNGLFK Trigger: TTTGAACAGGCCATTCAGGCAGCCAGTCGGGTCATT...GAATCTACATATGCTGGAAGGCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | GTAAAAGGACTCCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTGTAAACTGCTCATTTTaGATGACCCGACTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKGLPLNTTDFSSAGIHPVNCSF*MTRLAA Trigger: GGCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTAC...AGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGGAGTCCTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR TCA 90 bp | AACCACACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGCCGCTCTAGCCTCTTaGGGATGGGTCGGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NHTYKRSSGPDIERKTGKAALAS*GWVGSH Trigger: GTGTGATCCGACCCATCCTCAAGAGGCTAGAGCGGC...CTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGTGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCAATGACCCGACTGGCTaGCTGAATGGCCTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGNDPTG*LNGLFK Trigger: TTTGAACAGGCCATTCAGGCAGCCAGTCGGGTCATT...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GGAAAACAGGGAAGGGCAGAGAAGGATCAAACAGCAAAGCTCGGTGACTGGTCCCAGCTTTTTGACCAGTaGGGCACTAATGAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKQGRAEKDQTAKLGDWSQLFDQ*GTNEVL Trigger: GAGAACCTCATTAGTGCCCCACTGGTCAAAAAGCTG...GGACCAGTCACCGAGCTTTGCTGTTTGATCCTTCTCTGCCCTTCCCTGTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CCA 90 bp | GACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAGCTGGGACCAATGTACTTAAGGTCTTaGTGTTTGCCATCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DFSSAGIHPQVQLFKLGPMYLRS*CLPSTV Trigger: GACCGTGGATGGCAAACACCAAGACCTTAAGTACAT...TGGTCCCAGCTTAAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGGCAGAAAGCCTCGTGGTTCATaGGTCGGTAGTCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYKRSSGPDIERKTGKGRKPRGS*VGSPGA Trigger: AGCCCCAGGACTACCGACCCATGAACCACGAGGCTT...TCTGCCCTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR TCA 90 bp | TACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCGCCGCTCTAGCCTCTTaGGGATGGGTCGGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YQNTWTRFVCIHVYKALCAALAS*GWVGSH Trigger: GTGTGATCCGACCCATCCTCAAGAGGCTAGAGCGGC...GCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGTCACACTGCATGGCATaGATGGGGAGCGGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGLCAYMYIRHCASMSHCMA*MGSGRA Trigger: GGCTCTTCCGCTCCCCATCCATGCCATGCAGTGTGA...CATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GAACCAAGGCCCCCAACAGAGGACTCATTGGGGCCTTCCAGCATATGTAGATTCATGTACTTAAGGTCTTaGTGTTTGCCATCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRPPTEDSLGPSSICRFMYLRS*CLPSTV Trigger: GACCGTGGATGGCAAACACCAAGACCTTAAGTACAT...GAATCTACATATGCTGGAAGGCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | CTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAAGTTCGGATGCTGTaGGAAGAACTCCTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTTDFSSAGIHPQVQLFKVRML*EELLVA Trigger: GGCTACAAGGAGTTCTTCCCACAGCATCCGAACTTT...AAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGTAGACACAGCCCTGGCTCCTGTGGCATCTTaGAGATATATCCATCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MESISLCSGQERRVDTALAPVAS*RYIHHS Trigger: AGAATGATGGATATATCTTCAAGATGCCACAGGAGC...CAGGGCTGTGTCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR GCA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTCAAGGAAGAAGACTGTaGCACCGGGCTCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSSLSWDQYQDTENKWSQGRRL*HRAQLL Trigger: GAGGAGCTGAGCCCGGTGGCACAGTCTTCTTCCTTG...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | TTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAAAGGCAAGGAAGAAGACTGTaGCACCGGGCTCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCAYMYIRHCASMTMQQRQGRRL*HRAQLL Trigger: GAGGAGCTGAGCCCGGTGGCACAGTCTTCTTCCTTG...CCTTTGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACACACTTTTCCTGCGCTTaGTCTGGACAGGCACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RFVCIHVYKALCIHDHATHFSCA*SGQAHP Trigger: GGGATGTGCCTGTCCAGAGCAAGCGCAGGAAAAGTG...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGAAGCTTGGGCAGAGCTaGAATGAGGGAGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGLCAYMYIRHCASMKLGQS*NEGAPV Trigger: CACAGGAGCTCCCTCATTCCAGCTCTGCCCAAGCTT...CATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR TCA 90 bp | AACTTGCTCAGTGCTTTATTGAACCAAGGCCCCCAACAGAGGACTCATTGGGGCATCTGCAGTCCACAATaGCAAATTTCTCCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLSALLNQGPQQRTHWGICSPQ*QISPRC Trigger: ACATCGTGGAGAAATTTGTCATTGTGGACTGCAGAT...GCCCCAATGAGTCCTCTGTTGGGGGCCTTGGTTCAATAAAGCACTGAGCAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | TACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCCACTTTTCCTGCGCTTaGTCTGGACAGGCACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YQNTWTRFVCIHVYKALCHFSCA*SGQAHP Trigger: GGGATGTGCCTGTCCAGAGCAAGCGCAGGAAAAGTG...GCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR GCA 90 bp | TACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCGGCATGATGGGACGCTaGAGCAGAAAGGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQNTWTRFVCIHVYKALCGMMGR*SRKVSA Trigger: TGCTGAGACCTTTCTGCTGCAGCGTCCCATCATGCC...GCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTGACTGGCTGCCTGAATaGCCTGTTCAAACGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSSLSWDQYQDTENKWSDWLPE*PVQTCA Trigger: AGCGCACGTTTGAACAGGCCATTCAGGCAGCCAGTC...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | GCACTTATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAATGAGGGAGCTCCTGTaGCATCTTGAAGATATATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALMLPMESISLCSGQERRMRELL*HLEDIS Trigger: GGATATATCTTCAAGATGCCACAGGAGCTCCCTCAT...TCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS-3UTR CCA 90 bp | ATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGGGAGCTCCTCCATCTTaGTCTCTGGAAGCGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGLCAYMYIRHCASMGAPPS*SLEAHI Trigger: AATGTGCGCTTCCAGAGACCAAGATGGAGGAGCTCC...CATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAGTAAACTGCTCATTTTaGATGACCCGACTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFVCIHVYKALCIHDHATVNCSF*MTRLAA Trigger: GGCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTAC...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | TACCAAAATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCTCTGCCAGCCTGTTCTaGAACGACAGGCTTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: YQNTWTRFVCIHVYKALCSASLF*NDRLPT Trigger: AGTAGGAAGCCTGTCGTTCCAGAACAGGCTGGCAGA...GCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTATTTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGGCAGACAGCTTTTTGACCAGTaGGGCACTAATGAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TYKRSSGPDIERKTGKGRQLFDQ*GTNEVL Trigger: GAGAACCTCATTAGTGCCCCACTGGTCAAAAAGCTG...TCTGCCCTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ACATACAAGAGGTCTTCTGGGCCAGATATAGAAAGGAAAACAGGGAAGGGCAGACTCCATCTTGGTCTCTaGAAGCGCACATTCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TYKRSSGPDIERKTGKGRLHLGL*KRTFSL Trigger: CAAAGAGAATGTGCGCTTCCAGAGACCAAGATGGAG...TCTGCCCTTCCCTGTTTTCCTTTCTATATCTGGCCCAGAAGACCTCTTGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTTCTCCACGATGTTGCTaGACTTGCCTGTTAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSSLSWDQYQDTENKWSSPRCC*TCLLTG Trigger: CCCTGTTAACAGGCAAGTTCAGCAACATCGTGGAGA...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR CCA 90 bp | ATACTTGGACCCGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGAAAGTTCGGATGCTGTaGGAAGAACTCCTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGLCAYMYIRHCASMKVRML*EELLVA Trigger: GGCTACAAGGAGTTCTTCCCACAGCATCCGAACTTT...CATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCGGGTCCAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS-3UTR TCA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTATCTGCAGTCCACAATaGCAAATTTCTCCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RFSSLSWDQYQDTENKWSICSPQ*QISPRC Trigger: ACATCGTGGAGAAATTTGTCATTGTGGACTGCAGAT...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 90 bp | AAGCCATCAGACTCAAACTCAAAGACCGAGAGGTGGCGCGGCCGCTaGATGCCACCCAGCACGCGGGCAGGACTGAGAGCTGAACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPSDSNSKTERWRGR*MPPSTRAGLRAEPG Trigger: GCCGGGTTCAGCTCTCAGTCCTGCCCGCGTGCTGGGTGGCATTCAGCGGCCGCGCCACCTCTCGGTCTTTGAGTTTGAGTCTGATGGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS TCA 90 bp | TGCTCTGGACAGGCACATCCCGGTCCTGGGGCCGCTCTAGCCTCTTaGGGATGGGTCGGATCACACTGCATGGCATGGATGGGGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSGQAHPGPGAALAS*GWVGSHCMAWMGSG Trigger: TCCGCTCCCCATCCATGCCATGCAGTGTGATCCGACCCATCCTCAAGAGGCTAGAGCGGCCCCAGGACCGGGATGTGCCTGTCCAGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS GCA 90 bp | ACGTGCGCTCTGCCATCTGCGGGTCCACAGGGCTGGGGGAGTCCATaGACAGACCTGCATCCGAAGATTCTGAGGACTCAGATGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TCALPSAGPQGWGSP*TDLHPKILRTQMTG Trigger: CCCTGTCATCTGAGTCCTCAGAATCTTCGGATGCAGGTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGCAGATGGCAGAGCGCACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 90 bp | TGGCCTGTTCAAACGTGCGCTCTGCCATCTGCGGGTCCACAGGGCTaGGGGAGTCCATGCACAGACCTGCATCCGAAGATTCTGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: WPVQTCALPSAGPQG*GSPCTDLHPKILRT Trigger: AGTCCTCAGAATCTTCGGATGCAGGTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGCAGATGGCAGAGCGCACGTTTGAACAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | GAGGATGTACATCTCCGGGTAGTACAGGCTGGGGTAGTCGTTAGCTaGACGGTCCCGTTCCCTGATGAAGCGGCACATTCGTGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: EDVHLRVVQAGVVVS*TVPFPDEAAHSWST Trigger: CGTGGACCACGAATGTGCCGCTTCATCAGGGAACGGGACCGTGCAGCTAACGACTACCCCAGCCTGTACTACCCGGAGATGTACATCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 90 bp | AGGGATAGGTCTGCCAGCCTGTTCTGGAACGACAGGCTTCCTACTTaGGCTTTTGGAGGCTCACTGCCGAGCCCAGCGAGGTTGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RDRSASLFWNDRLPT*AFGGSLPSPARLCM Trigger: CATGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGCTCAAGTAGGAAGCCTGTCGTTCCAGAACAGGCTGGCAGACCTATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | TCAGTTTTCCTCCAGCTGTCCAGTGCTCGGGAGTTGGTGATGCTCTaGAGCACCGGACTGTGTTCCAGCAGCCTCACTGGTAAGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFLQLSSARELVML*STGLCSSSLTGKDR Trigger: CCGATCCTTACCAGTGAGGCTGCTGGAACACAGTCCGGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGACAGCTGGAGGAAAACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 90 bp | GTCTGCCAGCCTGTTCTGGAACGACAGGCTTCCTACTTGAGCTTTTaGAGGCTCACTGCCGAGCCCAGCGAGGTTGTGCATGGTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VCQPVLERQASYLSF*RLTAEPSEVVHGLC Trigger: ACACAGACCATGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGCTCAAGTAGGAAGCCTGTCGTTCCAGAACAGGCTGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 90 bp | CACTCAGTGGTAAGACACATCAAGTCAGGGGCTGAGCTGGGCCTCTaGGTAAAGGCCTGTCTGCGGCTGACCCATTCTGCCAAAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSVVRHIKSGAELGL*VKACLRLTHSAKAW Trigger: CCAAGCTTTGGCAGAATGGGTCAGCCGCAGACAGGCCTTTACCCAGAGGCCCAGCTCAGCCCCTGACTTGATGTGTCTTACCACTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
||
| CDS GCA 90 bp | CATCCGAAGATTCTGAGGACTCAGATGACAGGGAGCACTCAGAGGTaGGCCTGGACAGGGATAGGTCTGCCAGCCTGTTCTGGAACGACA | + |
|
Preference number: 5 (lower is better) Translates to: HPKILRTQMTGSTQR*AWTGIGLPACSGTT Trigger: TGTCGTTCCAGAACAGGCTGGCAGACCTATCCCTGTCCAGGCGCACCTCTGAGTGCTCCCTGTCATCTGAGTCCTCAGAATCTTCGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | ATTCTCTTTGTCCTCCCCAGGACTATTGGCGGCGGCTCGGTAGCCTaGTTCAGTTTTCCTCCAGCTGTCCAGTGCTCGGGAGTTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILFVLPRTIGGGSVA*FSFPPAVQCSGVGD Trigger: ATCACCAACTCCCGAGCACTGGACAGCTGGAGGAAAACTGAAGCAGGCTACCGAGCCGCCGCCAATAGTCCTGGGGAGGACAAAGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 90 bp | AAGATTCTGAGGACTCAGATGACAGGGAGCACTCAGAGGTGCGCCTaGACAGGGATAGGTCTGCCAGCCTGTTCTGGAACGACAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KILRTQMTGSTQRCA*TGIGLPACSGTTGF Trigger: GAAGCCTGTCGTTCCAGAACAGGCTGGCAGACCTATCCCTGTCCAGGCGCACCTCTGAGTGCTCCCTGTCATCTGAGTCCTCAGAATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 90 bp | GTGGTAAGACACCTTCTCTCCCTGGAGCTCCTCCATCTTGGTCTCTaGAAGCGCACATTCTCTTTGTCCTCCCCAGGACTATTGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVRHLLSLELLHLGL*KRTFSLSSPGLLAA Trigger: CGCCGCCAATAGTCCTGGGGAGGACAAAGAGAATGTGCGCTTCCAGAGACCAAGATGGAGGAGCTCCAGGGAGAGAAGGTGTCTTACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCCGAGCCCAGCGAGGTaGTGCATGGTCTGTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTEHNRLLLSWHPPSGSAPSPAR*CMVCVR Trigger: TCTTACACAGACCATGCACAACCTCGCTGGGCTCGG...AGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTTCCAGTGCTCGGGAGTaGGTGATGCTCTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LNTTDFSSAGIHPQVQLFSSARE*VMLCST Trigger: GGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGA...AAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | ATGAGGATGATTCTCTTGTCCAGGCTACAAGGCATGATGGGACGCTaGAGCAGAAAGGTCTCAGCATCCCGTTCCAGGGGCAGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MRMILLSRLQGMMGR*SRKVSASRSRGRFT Trigger: TGTGAACCTGCCCCTGGAACGGGATGCTGAGACCTTTCTGCTGCAGCGTCCCATCATGCCTTGTAGCCTGGACAAGAGAATCATCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTGTGTAGCAGAGTAGCATCCTGCATCCAGGCCATGCAAGAAGCTACTGTGGGTAAACTGCTCATTTaGAATGACCCGACTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALCSRVASCIQAMQEATVGKLLI*NDPTGC Trigger: GCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTACC...CACAGTAGCTTCTTGCATGGCCTGGATGCAGGATGCTACTCTGCTACACAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGTAGACACAGCCCTGACGATGTTGCTGAACTaGCCTGTTAACAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MESISLCSGQERRVDTALTMLLN*PVNRAT Trigger: GGTGGCCCTGTTAACAGGCAAGTTCAGCAACATCGT...CAGGGCTGTGTCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | GAAGCGTTTTATGGTAAACTGCTCATTTTGAATGACCCGACTGGCTaGCTGAATGGCCTGTTCAAACGTGCGCTCTGCCATCTGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EAFYGKLLILNDPTG*LNGLFKRALCHLRV Trigger: GACCCGCAGATGGCAGAGCGCACGTTTGAACAGGCCATTCAGGCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTACCATAAAACGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 90 bp | ATCTTCTTCAGAAGCCCTTTCGACAGGAGTCAAGGAAGAAGACTGTaGCACCGGGCTCAGCTCCTCTACTTCCATCTTCCACTCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IFFRSPFDRSQGRRL*HRAQLLYFHLPLSG Trigger: ACCACTGAGTGGAAGATGGAAGTAGAGGAGCTGAGCCCGGTGGCACAGTCTTCTTCCTTGACTCCTGTCGAAAGGGCTTCTGAAGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCCCCAAGCTGTACAAGGAAGCCTCCCCAGCGGTCAGTGTGTCAGACAGACAGCTCCTGTGGCATCTaGAAGATATATCCATCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LAPSCTRKPPQRSVCQTDSSCGI*KIYPSF Trigger: GAATGATGGATATATCTTCAAGATGCCACAGGAGCT...GTCTGTCTGACACACTGACCGCTGGGGAGGCTTCCTTGTACAGCTTGGGGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTTCCTTATCCAGCTTTTaGACCAGTGGGGCACTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PTEHNRLLLSWHPPSGSASLSSF*TSGALM Trigger: CATTAGTGCCCCACTGGTCAAAAAGCTGGATAAGGA...AGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | GACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAGCTGGGACCATCCTTATCCAGCTTTTaGACCAGTGGGGCACTAATG | + |
|
Preference number: 5 (lower is better) Translates to: DFSSAGIHPQVQLFKLGPSLSSF*TSGALM Trigger: CATTAGTGCCCCACTGGTCAAAAAGCTGGATAAGGA...TGGTCCCAGCTTAAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTACGATGTTGCTGAACTaGCCTGTTAACAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LNTTDFSSAGIHPQVQLFTMLLN*PVNRAT Trigger: GGTGGCCCTGTTAACAGGCAAGTTCAGCAACATCGT...AAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAACAGACTTCTCCTCAGCTGGCATCCACCCTCAGGTTCAGCTCTTTAAGAGCCTCTGGCACTaGCTGAACATGATGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LNTTDFSSAGIHPQVQLFKSLWH*LNMMRS Trigger: GGATCTCATCATGTTCAGCAAGTGCCAGAGGCTCTT...AAAGAGCTGAACCTGAGGGTGGATGCCAGCTGAGGAGAAGTCTGTTGTGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGTAGACACAGCCCTGATGAGGATGATTCTCTaGTCCAGGCTACAAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MESISLCSGQERRVDTALMRMIL*SRLQGM Trigger: CATGCCTTGTAGCCTGGACAAGAGAATCATCCTCAT...CAGGGCTGTGTCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 90 bp | CCAAAGCTTGGGCAGAGCTGGAATGAGGGAGCTCCTGTGGCATCTTaGAGATATATCCATCATTCTCTTTGTCCTCCCCAGGACTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLGQSWNEGAPVAS*RYIHHSLCPPQDYW Trigger: CCAATAGTCCTGGGGAGGACAAAGAGAATGATGGATATATCTTCAAGATGCCACAGGAGCTCCCTCATTCCAGCTCTGCCCAAGCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
||
| CDS TCA 90 bp | GTGGTCACTATCCAGGATGTTCTCAATCTCATGACACAGCGACTTTaGGCGAAAGACACGGGCCTTAGGTTCTTCAAGCTGCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVTIQDVLNLMTQRL*AKDTGLRFFKLLLF Trigger: GAAGAGCAGCAGCTTGAAGAACCTAAGGCCCGTGTCTTTCGCTCAAAGTCGCTGTGTCATGAGATTGAGAACATCCTGGATAGTGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACACCGAGCCCAGCGAGGTaGTGCATGGTCTGTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RFVCIHVYKALCIHDHATPSPAR*CMVCVR Trigger: TCTTACACAGACCATGCACAACCTCGCTGGGCTCGG...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTTCCAATGGAGAGCATAAGTCTATGCAGTGGCCAGGAGAGGAGAGTAGAAAGCGCACATTCTCTTaGTCCTCCCCAGGACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: YASNGEHKSMQWPGEESRKRTFS*SSPGLL Trigger: CAATAGTCCTGGGGAGGACAAAGAGAATGTGCGCTT...TCTACTCTCCTCTCCTGGCCACTGCATAGACTTATGCTCTCCATTGGAAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGCTCTTTAAGCTGGGACCAGTACCAAGATACAGAAAATAAGTGGAGTCCATTCTGCCAAAGCTaGGGCAGAGCTGGAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSSLSWDQYQDTENKWSPFCQS*GRAGMR Trigger: CCTCATTCCAGCTCTGCCCAAGCTTTGGCAGAATGG...ACTCCACTTATTTTCTGTATCTTGGTACTGGTCCCAGCTTAAAGAGCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
||
| CDS-3UTR CAA 90 bp | TTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAAAGGTGGAGCTCCTCCATCTaGGTCTCTGGAAGCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LCAYMYIRHCASMTMQQRWSSSI*VSGSAH Trigger: ATGTGCGCTTCCAGAGACCAAGATGGAGGAGCTCCA...CCTTTGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAGGTAAACTGCTCATTTaGAATGACCCGACTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFVCIHVYKALCIHDHATGKLLI*NDPTGC Trigger: GCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTACC...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAAAGAGCCTCTGGCACTaGCTGAACATGATGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RFVCIHVYKALCIHDHATKSLWH*LNMMRS Trigger: GGATCTCATCATGTTCAGCAAGTGCCAGAGGCTCTT...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS-3UTR CAA 90 bp | CGGTTTGTGTGCATACATGTATATAAGGCACTGTGCATCCATGACCATGCAACAATGAGGATGATTCTCTaGTCCAGGCTACAAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RFVCIHVYKALCIHDHATMRMIL*SRLQGM Trigger: CATGCCTTGTAGCCTGGACAAGAGAATCATCCTCAT...TGTTGCATGGTCATGGATGCACAGTGCCTTATATACATGTATGCACACAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 72 bp | CTGAATGCCACCCAGCACGCGGGCAGGACTGAGAGCTaGACCCGGCGCAGACTTCTGCAGGGGTACCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LNATQHAGRTES*TRRRLLQGYLH Trigger: ATGGAGGTACCCCTGCAGAAGTCTGCGCCGGGTTCAGCTCTCAGTCCTGCCCGCGTGCTGGGTGGCATTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 72 bp | GACTCAAACTCAAAGACCGAGAGGTGGCGCGGCCGCTaGATGCCACCCAGCACGCGGGCAGGACTGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSNSKTERWRGR*MPPSTRAGLRA Trigger: AGCTCTCAGTCCTGCCCGCGTGCTGGGTGGCATTCAGCGGCCGCGCCACCTCTCGGTCTTTGAGTTTGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CAA 90 bp | TTGCTCTGGACAGGCACATCCCGGTCCTGGGGCCGCTCTAGCCTCTaGAGGATGGGTCGGATCACACTGCATGGCATGGATGGGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLWTGTSRSWGRSSL*RMGRITLHGMDGER Trigger: CCGCTCCCCATCCATGCCATGCAGTGTGATCCGACCCATCCTCAAGAGGCTAGAGCGGCCCCAGGACCGGGATGTGCCTGTCCAGAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | CTGCCATCTGCGGGTCCACAGGGCTGGGGGAGTCCATaGACAGACCTGCATCCGAAGATTCTGAGGACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSAGPQGWGSP*TDLHPKILRTQ Trigger: CTGAGTCCTCAGAATCTTCGGATGCAGGTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGCAGATGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | CTCCAGCTGTCCAGTGCTCGGGAGTTGGTGATGCTCTaGAGCACCGGACTGTGTTCCAGCAGCCTCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LQLSSARELVML*STGLCSSSLTG Trigger: ACCAGTGAGGCTGCTGGAACACAGTCCGGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGACAGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 72 bp | CAAACGTGCGCTCTGCCATCTGCGGGTCCACAGGGCTaGGGGAGTCCATGCACAGACCTGCATCCGAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: QTCALPSAGPQG*GSPCTDLHPKI Trigger: AATCTTCGGATGCAGGTCTGTGCATGGACTCCCCCAGCCCTGTGGACCCGCAGATGGCAGAGCGCACGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CAA 72 bp | ACAGGCACATCCCGGTCCTGGGGCCGCTCTAGCCTCTaGAGGATGGGTCGGATCACACTGCATGGCATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TGTSRSWGRSSL*RMGRITLHGMD Trigger: ATCCATGCCATGCAGTGTGATCCGACCCATCCTCAAGAGGCTAGAGCGGCCCCAGGACCGGGATGTGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS TCA 72 bp | CAGTTTTCCTCCAGCTGTCCAGTGCTCGGGAGTTGGTaGTGCTCTGCAGCACCGGACTGTGTTCCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QFSSSCPVLGSW*CSAAPDCVPAA Trigger: GGCTGCTGGAACACAGTCCGGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGACAGCTGGAGGAAAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | CATCTCCGGGTAGTACAGGCTGGGGTAGTCGTTAGCTaGACGGTCCCGTTCCCTGATGAAGCGGCACATTCG | + |
|
Preference number: 6 (lower is better) Translates to: HLRVVQAGVVVS*TVPFPDEAAHS Trigger: CGAATGTGCCGCTTCATCAGGGAACGGGACCGTGCAGCTAACGACTACCCCAGCCTGTACTACCCGGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 72 bp | AGGACTCAGATGACAGGGAGCACTCAGAGGTGCGCCTaGACAGGGATAGGTCTGCCAGCCTGTTCTGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: RTQMTGSTQRCA*TGIGLPACSGT Trigger: CGTTCCAGAACAGGCTGGCAGACCTATCCCTGTCCAGGCGCACCTCTGAGTGCTCCCTGTCATCTGAGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 72 bp | GTAAGACACATCAAGTCAGGGGCTGAGCTGGGCCTCTaGGTAAAGGCCTGTCTGCGGCTGACCCATTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRHIKSGAELGL*VKACLRLTHSA Trigger: GGCAGAATGGGTCAGCCGCAGACAGGCCTTTACCCAGAGGCCCAGCTCAGCCCCTGACTTGATGTGTCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
||
| CDS CAA 90 bp | GGTCTGCCAGCCTGTTCTGGAACGACAGGCTTCCTACTTGAGCTTTaGGAGGCTCACTGCCGAGCCCAGCGAGGTTGTGCATGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPACSGTTGFLLEL*EAHCRAQRGCAWSV Trigger: CACAGACCATGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGCTCAAGTAGGAAGCCTGTCGTTCCAGAACAGGCTGGCAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | GCTTTTGGAGGCTCACTGCCGAGCCCAGCGAGGTTGTaGATGGTCTGTGTAAGAGTGGTAACCGGAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AFGGSLPSPARL*MVCVRVVTGEE Trigger: CTCCTCTCCGGTTACCACTCTTACACAGACCATGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | TCGGTAGCCTGCTTCAGTTTTCCTCCAGCTGTCCAGTaGTCGGGAGTTGGTGATGCTCTGCAGCACCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SVACFSFPPAVQ*SGVGDALQHRT Trigger: AGTCCGGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGACAGCTGGAGGAAAACTGAAGCAGGCTACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 72 bp | GGAAGCGCACATTCTCTTTGTCCTCCCCAGGACTATTaGCGGCGGCTCGGTAGCCTGCTTCAGTTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSAHSLCPPQDY*RRLGSLLQFSS Trigger: GGAGGAAAACTGAAGCAGGCTACCGAGCCGCCGCCAATAGTCCTGGGGAGGACAAAGAGAATGTGCGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
||
| CDS CAA 72 bp | GCCTGTTCTGGAACGACAGGCTTCCTACTTGAGCTTTaGGAGGCTCACTGCCGAGCCCAGCGAGGTTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ACSGTTGFLLEL*EAHCRAQRGCA Trigger: TGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGCTCAAGTAGGAAGCCTGTCGTTCCAGAACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CAA 72 bp | GCTTCAGTTTTCCTCCAGCTGTCCAGTGCTCGGGAGTaGGTGATGCTCTGCAGCACCGGACTGTGTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASVFLQLSSARE*VMLCSTGLCSS Trigger: GCTGGAACACAGTCCGGTGCTGCAGAGCATCACCAACTCCCGAGCACTGGACAGCTGGAGGAAAACTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS GCA 72 bp | ATTCTCTTGTCCAGGCTACAAGGCATGATGGGACGCTaGAGCAGAAAGGTCTCAGCATCCCGTTCCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLSRLQGMMGR*SRKVSASRSRG Trigger: GCCCCTGGAACGGGATGCTGAGACCTTTCTGCTGCAGCGTCCCATCATGCCTTGTAGCCTGGACAAGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
||
| CDS CCA 72 bp | CCTGTTCTGGAACGACAGGCTTCCTACTTGAGCTTTTaGAGGCTCACTGCCGAGCCCAGCGAGGTTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PVLERQASYLSF*RLTAEPSEVVH Trigger: ATGCACAACCTCGCTGGGCTCGGCAGTGAGCCTCCAAAAGCTCAAGTAGGAAGCCTGTCGTTCCAGAACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS CCA 72 bp | CTTGAGGATGGGTCGGATCACACTGCATGGCATGGATaGGGAGCGGAAGAGCCTCTGGCACTTGCTGAACAT | + |
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Preference number: 6 (lower is better) Translates to: LEDGSDHTAWHG*GAEEPLALAEH Trigger: ATGTTCAGCAAGTGCCAGAGGCTCTTCCGCTCCCCATCCATGCCATGCAGTGTGATCCGACCCATCCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS CCA 72 bp | CACCTTCTCTCCCTGGAGCTCCTCCATCTTGGTCTCTaGAAGCGCACATTCTCTTTGTCCTCCCCAGGACTA | + |
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Preference number: 6 (lower is better) Translates to: HLLSLELLHLGL*KRTFSLSSPGL Trigger: TAGTCCTGGGGAGGACAAAGAGAATGTGCGCTTCCAGAGACCAAGATGGAGGAGCTCCAGGGAGAGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079857.9 |
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| CDS GCA 72 bp | AGAAGCCCTTTCGACAGGAGTCAAGGAAGAAGACTGTaGCACCGGGCTCAGCTCCTCTACTTCCATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSPFDRSQGRRL*HRAQLLYFHLP Trigger: TGGAAGATGGAAGTAGAGGAGCTGAGCCCGGTGGCACAGTCTTCTTCCTTGACTCCTGTCGAAAGGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS CCA 72 bp | TATATCCATCATTCTCTTTGTCCTCCCCAGGACTATTaGCGGCGGCTCGGTAGCCTGCTTCAGTTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YIHHSLCPPQDY*RRLGSLLQFSS Trigger: GGAGGAAAACTGAAGCAGGCTACCGAGCCGCCGCCAATAGTCCTGGGGAGGACAAAGAGAATGATGGATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS CCA 72 bp | GCCACCATAGTTTCTGGTGAGATGTACTTAAGGTCTTaGTGTTTGCCATCCACGGTCTGCAGGAGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: ATIVSGEMYLRS*CLPSTVCRRKA Trigger: GGCCTTCCTCCTGCAGACCGTGGATGGCAAACACCAAGACCTTAAGTACATCTCACCAGAAACTATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS TCA 72 bp | GGGCAGAGCTGGAATGAGGGAGCTCCTGTGGCATCTTaGAGATATATCCATCATTCTCTTTGTCCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQSWNEGAPVAS*RYIHHSLCPPQ Trigger: CTGGGGAGGACAAAGAGAATGATGGATATATCTTCAAGATGCCACAGGAGCTCCCTCATTCCAGCTCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS TCA 72 bp | CTGACCCATTCTGCCAAAGCTTGGGCAGAGCTGGAATaGGGGAGCTCCTGTGGCATCTTGAAGATATATCCA | + |
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Preference number: 6 (lower is better) Translates to: LTHSAKAWAELE*GSSCGILKIYP Trigger: TGGATATATCTTCAAGATGCCACAGGAGCTCCCTCATTCCAGCTCTGCCCAAGCTTTGGCAGAATGGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028804.15 |
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| CDS GCA 72 bp | TATGGTAAACTGCTCATTTTGAATGACCCGACTGGCTaGCTGAATGGCCTGTTCAAACGTGCGCTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YGKLLILNDPTG*LNGLFKRALCH Trigger: ATGGCAGAGCGCACGTTTGAACAGGCCATTCAGGCAGCCAGTCGGGTCATTCAAAATGAGCAGTTTACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS CAA 72 bp | ATAGTTTCTGGTGAGATGTACTTAAGGTCTTGGTGTTaGCCATCCACGGTCTGCAGGAGGAAGGCCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: IVSGEMYLRSWC*PSTVCRRKALE Trigger: CTCTAAGGCCTTCCTCCTGCAGACCGTGGATGGCAAACACCAAGACCTTAAGTACATCTCACCAGAAACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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| CDS CAA 90 bp | TATCTGCAGTCCACAATGACAAATTTCTCCACGATGTTGCTGAACTaGCCTGTTAACAGGGCCACCATAGTTTCTGGTGAGATGTACTTA | + |
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Preference number: 6 (lower is better) Translates to: YLQSTMTNFSTMLLN*PVNRATIVSGEMYL Trigger: TAAGTACATCTCACCAGAAACTATGGTGGCCCTGTTAACAGGCAAGTTCAGCAACATCGTGGAGAAATTTGTCATTGTGGACTGCAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028804.15 ENSMUST00000079857.9 |
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