Pregenerated sensors for CDC25A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032477Ensembl transcript IDs: ENSMUST00000094324.8, ENSMUST00000198308.5, ENSMUST00000198848.2, ENSMUST00000199787.3
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGCAAGCAGGTGCCAGTGAGCAGGAGCCTGGCACTTAGCAGATaGATAGTGCGCCCCCAGACCCCGGCAAGCAGCAGCCACAACCGA | + |
|
Preference number: 1 (lower is better) Translates to: GSKQVPVSRSLALSR*IVRPQTPASSSHNR Trigger: TCGGTTGTGGCTGCTGCTTGCCGGGGTCTGGGGGCGCACTATGCATCTGCTAAGTGCCAGGCTCCTGCTCACTGGCACCTGCTTGCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR CCA 90 bp | TGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACAGGTCCAAGGAATaGAAGGCCCAGGTCTTTCTCCAGGTACCGTACAGCTGGCCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: CPRLQPGSVGDRSKE*KAQVFLQVPYSWPL Trigger: AAGGGGCCAGCTGTACGGTACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCTACACTCCCAGGTTGGAGCCTAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR CCA 90 bp | TCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTaGCCAGCAGCACTTGGGCGGCTTTTCTCTCCTCGTGACAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: SSTRPSPPFQPIFGI*PAALGRLFSPRDRP Trigger: TGGCCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR GCA 90 bp | GGCTGGTGTCCAAGGATATCAACAGGCAGGCACCAAAACAGGCTGTaGAGAATCAAAGCAGCCTGGCCCCTCAGACGAGAGGTGTTTCCG | + |
|
Preference number: 1 (lower is better) Translates to: GWCPRISTGRHQNRL*RIKAAWPLRREVFP Trigger: CGGAAACACCTCTCGTCTGAGGGGCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCCTTGGACACCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CCA 90 bp | TCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTACCGTACAGCTaGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACGGG | + |
|
Preference number: 1 (lower is better) Translates to: SKEWKAQVFLQVPYS*PLCLLLCSKGKRDG Trigger: CCCGTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR CCA 90 bp | AAGTGCCTTCCTGTGACTCCTACACCAGCCACTGTCATGGGGACGTaGGGTGAGGAGTGGAGACAAGACTTTCCCCGAGGAACACTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: KCLPVTPTPATVMGT*GEEWRQDFPRGTLQ Trigger: TTGCAGTGTTCCTCGGGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGTAGGAGTCACAGGAAGGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CCA 90 bp | TCAACAGGCAGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTaGCCCCTCAGACGAGAGGTGTTTCCGAGAGCCTCACTTCCATGG | + |
|
Preference number: 1 (lower is better) Translates to: STGRHQNRLCRIKAA*PLRREVFPRASLPW Trigger: CCATGGAAGTGAGGCTCTCGGAAACACCTCTCGTCTGAGGGGCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR GCA 90 bp | CACACTACAGCATTCCAGTACTGGCCTGATGGAAGCTGCCTAAAGTaGCTTCCTGTGACTCCTACACCAGCCACTGTCATGGGGACGTGG | + |
|
Preference number: 1 (lower is better) Translates to: HTTAFQYWPDGSCLK*LPVTPTPATVMGTW Trigger: CCACGTCCCCATGACAGTGGCTGGTGTAGGAGTCACAGGAAGGCACTTTAGGCAGCTTCCATCAGGCCAGTACTGGAATGCTGTAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR GCA 90 bp | CTCTGCAGCAAAGGGAAAAGGGACGGGGCAGAGGGAAGCTCAGGCTaGTACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTC | + |
|
Preference number: 1 (lower is better) Translates to: LCSKGKRDGAEGSSG*YHLASELLQATVHL Trigger: GAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGTAGCAGCCTGAGCTTCCCTCTGCCCCGTCCCTTTTCCCTTTGCTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR GCA 90 bp | CACAGTGAGACTAAAGGAACAGGAGAGACACGGTCAGGATACGCCTaGCTCATATCATCTGGCTTCCTCTGCCTAGAGCTGCAAGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: HSETKGTGETRSGYA*LISSGFLCLELQGW Trigger: CCAGCCTTGCAGCTCTAGGCAGAGGAAGCCAGATGATATGAGGCAGGCGTATCCTGACCGTGTCTCTCCTGTTCCTTTAGTCTCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR TCA 90 bp | AGACTCCAGTCTGTGCTGTGCTTGTCCAGCTTTGGCAGACAGTCCTaGCAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: RLQSVLCLSSFGRQS*QGRTLTEQKSVTAG Trigger: CCCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAAGCTGGACAAGCACAGCACAGACTGGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR GCA 90 bp | CCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTTTTaGTCTTTTCTCCTGCCCAGGTCCGGCTCTTGGTGCGGAACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: PFGFRASSGDCTSLF*SFLLPRSGSWCGTS Trigger: AGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAAAGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR GCA 90 bp | ACCAGGGACCAACTGGGACATACTTCAACACGCCAGGGAAGGGGCTaGTCATTCCCTTGCTCTCCACATATTTTCAAACAAGATTTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: TRDQLGHTSTRQGRG*SFPCSPHIFKQDLF Trigger: AAACAAATCTTGTTTGAAAATATGTGGAGAGCAAGGGAATGAGCAGCCCCTTCCCTGGCGTGTTGAAGTATGTCCCAGTTGGTCCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACAGGTCCAAGGAATGGTTGGCCAGCAGCACTTaGGCGGCTTTTCTCTCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: AGCPRLQPGSVGDRSKEWLASST*AAFLSS Trigger: CGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAA...CCATTCCTTGGACCTGTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCACCACAACCGACCCAATaGCCCAGCATGGGGGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TGQGLPNKAFFMGCSVRAPQPTQ*PSMGAW Trigger: CCACGCCCCCATGCTGGGCCATTGGGTCGGTTGTGG...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGAGTGTAACGGCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACCTAGAGCTGCAAGGCTaGGAAGGCAGCAAGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QKSVTAGCPRLQPGSVGDLELQG*EGSKQV Trigger: CACCTGCTTGCTGCCTTCCCAGCCTTGCAGCTCTAG...GTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCTCATGGGATGCTCAGTaGGAGCAGCCTAACACGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TPATVMGTWGEEWRQDFPSWDAQ*EQPNTV Trigger: CACCGTGTTAGGCTGCTCTCACTGAGCATCCCATGA...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGAGTGTAACGGCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACTCATGGGATGCTCAGTaGGAGCAGCCTAACACGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QKSVTAGCPRLQPGSVGDSWDAQ*EQPNTV Trigger: CACCGTGTTAGGCTGCTCTCACTGAGCATCCCATGA...GTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR CAA 90 bp | CCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTaGGGCGGCTTTTCTCTCCTCGTGACAGGCCAGGGTCTACCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSSLSLVFGQQH*GGFSLLVTGQGLPN Trigger: ATTGGGTAGACCCTGGCCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCTACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACCTCCAGTCTGTGCTGTaGTTGTCCAGCTTTGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TPTPATVMGTWGEEWRQDLQSVL*LSSFGR Trigger: TCTGCCAAAGCTGGACAAGCACAGCACAGACTGGAG...GTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGTAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCTACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACCCTATCTTTGGTATTTaGCCAGCAGCACTTGGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: TPTPATVMGTWGEEWRQDPIFGI*PAALGR Trigger: CCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGG...GTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGTAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGCATTGGCCGGTAGCTaGGGGGTTCACAGTGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: QVPYSWPLCLLLCSKGKRALAGS*GVHSET Trigger: AGTCTCACTGTGAACCCCCCAGCTACCGGCCAATGC...CCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCTTTGGCAGACAGTCCTaGCAGGGAAGGACTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TPATVMGTWGEEWRQDFPFGRQS*QGRTLT Trigger: TGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAA...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGGCAAGCAGGTGCCAGTaGGCAGGAGCCTGGCACTTA | + |
|
Preference number: 2 (lower is better) Translates to: QTVLTGKDSYRTEECNGRASRCQ*AGAWHL Trigger: TAAGTGCCAGGCTCCTGCTCACTGGCACCTGCTTGC...CCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCGGCCCCTTTGCTTACTaGTCTGCAGCAAAGGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TPATVMGTWGEEWRQDFPGPFAY*SAAKGK Trigger: TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCC...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGATCATCTGGCTTCCTCTaGCTAGAGCTGCAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GTVQLAPLLTALQQREKGSSGFL*LELQGW Trigger: CCAGCCTTGCAGCTCTAGGCAGAGGAAGCCAGATGA...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAGAGTGTAACGGCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACAGGTCCGGCTCTTGGTaGGGAACTTCTTTAGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QKSVTAGCPRLQPGSVGDRSGSW*GTSLGL Trigger: AAGACCTAAAGAAGTTCCGCACCAAGAGCCGGACCT...GTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACAGGTCCAAGGAATGGCTTCCAGCCTATCTTTaGTATTTGGCCAGCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AGCPRLQPGSVGDRSKEWLPAYL*YLASST Trigger: AGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAG...CCATTCCTTGGACCTGTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGACAGGTCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTACCGTACAGCCCAGGTCCGGCTCTTaGTGCGGAACTTCTTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RRQVQGMEGPGLSPGTVQPRSGS*CGTSLG Trigger: ACCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGG...CTGTACGGTACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCCTTTGCTTACTGCTCTaGAGCAAAGGGAAAAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TPATVMGTWGEEWRQDFPLCLLL*SKGKRD Trigger: GTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAG...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACAGGTCCAAGGAATaGAAGGCCCAGGTCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QVPYSWPLCLLLCSKGKRDRSKE*KAQVFL Trigger: GAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTC...CCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGAGACAGGTCCAAGGAATaGAAGGCCCAGGTCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GTVQLAPLLTALQQREKGDRSKE*KAQVFL Trigger: GAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTC...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTGGCCCCTTTGCTTACTaGTCTGCAGCAAAGGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPPFQPIFGIWPAALGRLGPFAY*SAAKGK Trigger: TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCC...AAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCAGGAACACTGCAAAATaGAGAAGTAGGTCTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TPATVMGTWGEEWRQDFPRNTAK*RSRSGK Trigger: CTTCCCAGACCTACTTCTGCATTTTGCAGTGTTCCT...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCACCTATCTTTGGTATTTaGCCAGCAGCACTTGGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: TGQGLPNKAFFMGCSVRAPIFGI*PAALGR Trigger: CCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGG...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR CAA 90 bp | ACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTTTaGCTCTTTTCTCCTGCCCAGGTCCGGCTCTTGGTGCGGAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: TIWLQSFFRRLYISL*LFSPAQVRLLVRNF Trigger: GAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAAAGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCTTTGGCAGACAGTCCTaGCAGGGAAGGACTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGFGRQS*QGRTLT Trigger: TGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAA...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR TCA 90 bp | GGATATCAACAGGCAGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTGGCGTGCCCACCCAACACTaGTTGGATATTCCGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GYQQAGTKTGCAESKQPGVPTQH*LDIPTH Trigger: ATGAGTCGGAATATCCAATCAGTGTTGGGTGGGCAC...GCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGCTGCTACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTTTTGCTCTTTTCTCCTaGCCAGGTCCGGCTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SGCYHLASELLQATVHLSFALFS*PGPALG Trigger: ACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAA...AGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGTAGCAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR CAA 90 bp | CTGTACATCTCTCTTTTGCTCTTTTCTCCTGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTTAGGTCTTCTTTAAAGTCTTCATGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LYISLLLFSPAQVRL*VRNFFRSSLKSSWC Trigger: GCACCATGAAGACTTTAAAGAAGACCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAAAGAGAGATGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGCTACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTTTCTTTGCTTACTGCTCTaGAGCAAAGGGAAAAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RLLPFGFRASSGDCTSLFLCLLL*SKGKRD Trigger: GTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAG...AAAGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGTAGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTAGGATGATAAAACTCTACCTAGAATGGCAGTATTTTGACTTAATGAAGGCTTTTCTCTCCTCGTaGCAGGCCAGGGTCTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: APRMIKLYLEWQYFDLMKAFLSS*QARVYP Trigger: TGGGTAGACCCTGGCCTGTCACGAGGAGAGAAAAGC...CTTCATTAAGTCAAAATACTGCCATTCTAGGTAGAGTTTTATCATCCTAGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGAGTGTAACGGCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACTGTGCTTGTCCAGCTTaGGCAGACAGTCCTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKSVTAGCPRLQPGSVGDCACPA*ADSPDR Trigger: CCTGTCAGGACTGTCTGCCAAAGCTGGACAAGCACA...GTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR TCA 72 bp | TTGGCCAGCAGCACTTGGGCGGCTTTTCTCTCCTCGTaGCAGGCCAGGGTCTACCCAATAAGGCCTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LASSTWAAFLSS*QARVYPIRPSS Trigger: TGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR GCA 72 bp | CAGGTCTTTCTCCAGGTACCGTACAGCTGGCCCCTTTaGTTACTGCTCTGCAGCAAAGGGAAAAGGGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVFLQVPYSWPL*LLLCSKGKRDG Trigger: CCCGTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGAGAAAGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR GCA 72 bp | TCAGGATACGCCTGCCTCATATCATCTGGCTTCCTCTaGCTAGAGCTGCAAGGCTGGGAAGGCAGCAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGYACLISSGFL*LELQGWEGSKQ Trigger: CTGCTTGCTGCCTTCCCAGCCTTGCAGCTCTAGGCAGAGGAAGCCAGATGATATGAGGCAGGCGTATCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR CCA 72 bp | AGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTaGCCCCTCAGACGAGAGGTGTTTCCGAGAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHQNRLCRIKAA*PLRREVFPRAS Trigger: TGAGGCTCTCGGAAACACCTCTCGTCTGAGGGGCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTVLTGKDSYRTEECNGRAQVRL*VRNFFR Trigger: CCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGGC...CCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| 3UTR GCA 72 bp | AGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGGTaGCCTAGGCTCCAACCTGGGAGTGTAGGAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTLTEQKSVTAG*PRLQPGSVGDR Trigger: CCTGTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR GCA 72 bp | CCAAGGATATCAACAGGCAGGCACCAAAACAGGCTGTaGAGAATCAAAGCAGCCTGGCCCCTCAGACGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRISTGRHQNRL*RIKAAWPLRRE Trigger: CTCTCGTCTGAGGGGCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CCA 72 bp | TGGAAGGCCCAGGTCTTTCTCCAGGTACCGTACAGCTaGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WKAQVFLQVPYS*PLCLLLCSKGK Trigger: TTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGAGAAAGACCTGGGCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCTGTGCTTGTCCAGCTTaGGCAGACAGTCCTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGCACPA*ADSPDR Trigger: CCTGTCAGGACTGTCTGCCAAAGCTGGACAAGCACA...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACCTTCCAGCCTATCTTaGGTATTTGGCCAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTVQLAPLLTALQQREKGPSSLS*VFGQQH Trigger: GTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGG...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR TCA 72 bp | TCTGTGCTGTGCTTGTCCAGCTTTGGCAGACAGTCCTaGCAGGGAAGGACTCTTACAGAACAGAAGAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVLCLSSFGRQS*QGRTLTEQKSV Trigger: TACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAAGCTGGACAAGCACAGCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| 3UTR CCA 72 bp | GAGACTCTTCCTAAGAAAAACCTGGCTAGACCCCAATaGAGCAAAGATAGCAGAGAGGCTGGTGTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETLPKKNLARPQ*SKDSREAGVQG Trigger: TCCTTGGACACCAGCCTCTCTGCTATCTTTGCTCCATTGGGGTCTAGCCAGGTTTTTCTTAGGAAGAGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR GCA 72 bp | CAACTGGGACATACTTCAACACGCCAGGGAAGGGGCTaGTCATTCCCTTGCTCTCCACATATTTTCAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: QLGHTSTRQGRG*SFPCSPHIFKQ Trigger: TTGTTTGAAAATATGTGGAGAGCAAGGGAATGAGCAGCCCCTTCCCTGGCGTGTTGAAGTATGTCCCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCACACAACTTAACAAGTTaGCCTTTTTCTTATCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGQGLPNKAFFMGCSVRAHNLTS*PFSYPC Trigger: GCAGGGATAAGAAAAAGGCAAACTTGTTAAGTTGTG...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGAAAAACCTGGCTAGACCCCAATGGAGCAAAGATAGCAGAGAGGCTGGTGTCTCAGTCCTTGACTTaGAGTAGCAGCAATACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LRKTWLDPNGAKIAERLVSQSLT*SSSNTG Trigger: ACCAGTATTGCTGCTACTCAAAGTCAAGGACTGAGA...CACCAGCCTCTCTGCTATCTTTGCTCCATTGGGGTCTAGCCAGGTTTTTCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR GCA 72 bp | ACTTCAACACGCCAGGGAAGGGGCTGCTCATTCCCTTaGTCTCCACATATTTTCAAACAAGATTTGTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSTRQGRGCSFP*SPHIFKQDLFN Trigger: ATTAAACAAATCTTGTTTGAAAATATGTGGAGAGCAAGGGAATGAGCAGCCCCTTCCCTGGCGTGTTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGTAGGAGACAGGTCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTAATCTTCCCCGTGGGCTaGGGCGCAGGCGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVGDRSKEWKAQVFLQVIFPVG*GAGVGL Trigger: CAGCCCCACGCCTGCGCCGCAGCCCACGGGGAAGAT...TACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCTACACTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTCAGGGCTGGGCTACATCCCAGGAGCTTCTGAGGTAGGGAATTTATTCATCTTCCCCGTGGGCTaGGGCGCAGGCGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSGLGYIPGASEVGNLFIFPVG*GAGVGL Trigger: CAGCCCCACGCCTGCGCCGCAGCCCACGGGGAAGAT...GAATAAATTCCCTACCTCAGAAGCTCCTGGGATGTAGCCCAGCCCTGAAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198848.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCTACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACCCCAGTCCTTCCAGCTaGTCCATGGTGACCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTPATVMGTWGEEWRQDPSPSS*SMVTVR Trigger: CCTGACGGTCACCATGGACCAGCTGGAAGGACTGGG...GTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGTAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACGGGACTGGGATGGAAGCTaGGCGGGCTCCGGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLAPLLTALQQREKGRDWDGS*AGSGTS Trigger: GGATGTTCCGGAGCCCGCCCAGCTTCCATCCCAGTC...CCGTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGTGAGCAGGAGCCTGGCACTTAGCAGATGCATAGTGCGCCCCCAGACCCATCCGAGCTGGGGCTaGATTCTGCCTGTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPVSRSLALSRCIVRPQTHPSWG*ILPVCK Trigger: TTTACACACAGGCAGAATTCAGCCCCAGCTCGGATG...GGTCTGGGGGCGCACTATGCATCTGCTAAGTGCCAGGCTCCTGCTCACTGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCATCAACACCGCCCGAGTaGTGGAGCCGCACGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGLPNKAFFMGCSVRASTPPE*WSRTGK Trigger: CTTCCCCGTGCGGCTCCAGCACTCGGGCGGTGTTGA...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGACAGGTCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTACCGTACAGGACTGGGATGGAAGCTaGGCGGGCTCCGGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQVQGMEGPGLSPGTVQDWDGS*AGSGTS Trigger: GGATGTTCCGGAGCCCGCCCAGCTTCCATCCCAGTC...CTGTACGGTACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | ACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACGGCAGGGTAGTGGAGCTTaGGGTACTCATTGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLAPLLTALQQREKGRQGSGA*GTHCRA Trigger: GGCTCGGCAATGAGTACCCCAAGCTCCACTACCCTG...CCGTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGTGAGCAGGAGCCTGGCACTTAGCAGATGCATAGTGCGCCCCCAGACCCATCCCAGGAGCTTCTaGGGTAGGGAATTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVSRSLALSRCIVRPQTHPRSF*GREFIL Trigger: GAGAATAAATTCCCTACCTCAGAAGCTCCTGGGATG...GGTCTGGGGGCGCACTATGCATCTGCTAAGTGCCAGGCTCCTGCTCACTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | AGCAATACTGGTCTGCAGCGCCTCCTAGGGGTGACTGAGCTCCTTGCGCTGTTCGAGGCTTGCCATGCATaGTGGGGTCTCCTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SNTGLQRLLGVTELLALFEACHA*WGLLII Trigger: AATGATGAGGAGACCCCATCATGCATGGCAAGCCTC...GAACAGCGCAAGGAGCTCAGTCACCCCTAGGAGGCGCTGCAGACCAGTATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTTTCTCTCCTCGTGACAGGCTCGTGAGACCGGTCTaGTCTCTTCAACACCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IFGIWPAALGRLFSPRDRLVRPV*SLQHRP Trigger: CGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAG...CCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCGCATTGGCCGGTAGCTaGGGGGTTCACAGTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RVIHEALSSLPAYLWYLAALAGS*GVHSET Trigger: AGTCTCACTGTGAACCCCCCAGCTACCGGCCAATGC...GGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CAA 72 bp | CCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTaGGGCGGCTTTTCTCTCCTCGTGACAGGCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLSLVFGQQH*GGFSLLVTGQG Trigger: ACCCTGGCCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGATTGCAGGTCTCCTCATaGCAAGGGGAGCTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTVQLAPLLTALQQREKGLQVSS*QGELSR Trigger: TCTGGACAGCTCCCCTTGTCATGAGGAGACCTGCAA...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | ACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACGGTCCAGAGGCTTGCCATaGATGATGGGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVQLAPLLTALQQREKGRSRGLP*MMGSPH Trigger: ATGAGGAGACCCCATCATGCATGGCAAGCCTCTGGA...CCGTCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACTCAACACCGCCCGAGTaGTGGAGCCGCACGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQTVLTGKDSYRTEECNSTPPE*WSRTGK Trigger: CTTCCCCGTGCGGCTCCAGCACTCGGGCGGTGTTGA...GTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGCTCGTGAGACCGGTCTaGTCTCTTCAACACCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVLTGKDSYRTEECNGRLVRPV*SLQHRP Trigger: CGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAG...CCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTCAGGGCTGGGCTACATCCCAGGAGCTTCTGAGGTAGGGAATTTATTCCCCAGTCCTTCCAGCTaGTCCATGGTGACCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSGLGYIPGASEVGNLFPSPSS*SMVTVR Trigger: CCTGACGGTCACCATGGACCAGCTGGAAGGACTGGG...GAATAAATTCCCTACCTCAGAAGCTCCTGGGATGTAGCCCAGCCCTGAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198848.2 |
||
| CDS-3UTR CCA 90 bp | GGATATCAACAGGCAGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTGGCATCAGGGATAGAGACTaGGATGGAAGCTGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYQQAGTKTGCAESKQPGIRDRD*DGSWAG Trigger: GCCCGCCCAGCTTCCATCCCAGTCTCTATCCCTGAT...GCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTGCTTGGGGTACTCATTaGCGAGCCTATCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPFQPIFGIWPAALGRLAWGTH*RAYLSL Trigger: GAGAGAGAGATAGGCTCGGCAATGAGTACCCCAAGC...AAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGTGAGCAGGAGCCTGGCACTTAGCAGATGCATAGTGCGCCCCCAGACCCCAAAATGTTCTCAATaGTTCCTTTGGGGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPVSRSLALSRCIVRPQTPKCSQ*FLWGKT Trigger: TGTCTTCCCCCAAAGGAACCATTGAGAACATTTTGG...GGTCTGGGGGCGCACTATGCATCTGCTAAGTGCCAGGCTCCTGCTCACTGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAACCCAGGTCCGGCTCTTaGTGCGGAACTTCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRYRTAGPFAYCSAAKGKPRSGS*CGTSLG Trigger: ACCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGG...TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CAA 72 bp | GTTGCAGACTCCAGTCTGTGCTGTGCTTGTCCAGCTTaGGCAGACAGTCCTGACAGGGAAGGACTCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VADSSLCCACPA*ADSPDREGLLQ Trigger: CTGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAAGCTGGACAAGCACAGCACAGACTGGAGTCTGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGACATCCGAGCTGGGGCTaGATTCTGCCTGTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTGQGLPNKAFFMGCSVRHPSWG*ILPVCK Trigger: TTTACACACAGGCAGAATTCAGCCCCAGCTCGGATG...TCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCGAGGCTTGCCATGCATaGTGGGGTCTCCTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGEACHA*WGLLII Trigger: AATGATGAGGAGACCCCATCATGCATGGCAAGCCTC...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGCCCAGGTCCGGCTCTTGGTGCGGAACTTCTTTAGGTCTTCTTTAAAGTTGCAGGTCTCCTCATaGCAAGGGGAGCTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPAQVRLLVRNFFRSSLKLQVSS*QGELSR Trigger: TCTGGACAGCTCCCCTTGTCATGAGGAGACCTGCAA...CTTTAAAGAAGACCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGGTGTCGTGGTCTAGAGAATCAGAGTGGCTCCTCTTCAGGGCTGGGCTACTTTTCTCACAGTCACTaGCCAGTCCTTCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERCRGLENQSGSSSGLGYFSHSH*PVLPAG Trigger: ACCAGCTGGAAGGACTGGGCAGTGACTGTGAGAAAA...GTAGCCCAGCCCTGAAGAGGAGCCACTCTGATTCTCTAGACCACGACACCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198848.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAATCCAGAGGCTTGCCATaGATGATGGGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRYRTAGPFAYCSAAKGKSRGLP*MMGSPH Trigger: ATGAGGAGACCCCATCATGCATGGCAAGCCTCTGGA...TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTTTCACCTCTTCTTCCATGTaGAGATTCACGGCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFQPIFGIWPAALGRLFTSSSM*RFTAPL Trigger: CAAGGGTGCCGTGAATCTGCACATGGAAGAAGAGGT...GAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGAGGTCCGGCTCTTGGTaGGGAACTTCTTTAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVPYSWPLCLLLCSKGKRRSGSW*GTSLGL Trigger: AAGACCTAAAGAAGTTCCGCACCAAGAGCCGGACCT...CCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | GGATATCAACAGGCAGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTGGCTTTGCTCTTTTCTCCTaGCCAGGTCCGGCTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYQQAGTKTGCAESKQPGFALFS*PGPALG Trigger: ACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAA...GCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCATCTAGAGAATCAGAGTaGCTCCTCTTCAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGLPNKAFFMGCSVRASRESE*LLFRAG Trigger: CCCAGCCCTGAAGAGGAGCCACTCTGATTCTCTAGA...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGACCTCATCGGACAAAGTaGCTTTTACAGGTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVQLAPLLTALQQREKGPHRTK*LLQVTG Trigger: CCCAGTCACCTGTAAAAGCCACTTTGTCCGATGAGG...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGTAGGAGACAGGTCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTACCTCATCGGACAAAGTaGCTTTTACAGGTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVGDRSKEWKAQVFLQVPHRTK*LLQVTG Trigger: CCCAGTCACCTGTAAAAGCCACTTTGTCCGATGAGG...TACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCTACACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GCAAAGATAGCAGAGAGGCTGGTGTCCAAGGATATCAACAGGCAGGCACCAAAACAGGGTAGTGGAGCTTaGGGTACTCATTGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKIAERLVSKDINRQAPKQGSGA*GTHCRA Trigger: GGCTCGGCAATGAGTACCCCAAGCTCCACTACCCTG...TTTTGGTGCCTGCCTGTTGATATCCTTGGACACCAGCCTCTCTGCTATCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| 3UTR CAA 72 bp | TGGTGCAGGCTCTTACCAGCATCTCAGTCCTTGACTTaGAGTAGCAGCAATACTGGTCTGCAGCGCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: WCRLLPASQSLT*SSSNTGLQRLL Trigger: TAGGAGGCGCTGCAGACCAGTATTGCTGCTACTCAAAGTCAAGGACTGAGATGCTGGTAAGAGCCTGCACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCATCCAGAAGGTCTATaGAGCCATCATCCTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGHPEGL*SHHPHR Trigger: CCGATGAGGATGATGGCTTCATAGACCTTCTGGATG...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGCTGGGGCTGAATTCTaGCTGTGTGTAAAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRYRTAGPFAYCSAAKGKAGAEF*LCVKGS Trigger: AGATCCCTTTACACACAGGCAGAATTCAGCCCCAGC...TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | GTGACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAACCTCTTCTTCCATGTaGAGATTCACGGCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGQGLPNKAFFMGCSVRTSSSM*RFTAPL Trigger: CAAGGGTGCCGTGAATCTGCACATGGAAGAAGAGGT...TCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTTTATCAGGGATAGAGACTaGGATGGAAGCTGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPFGFRASSGDCTSLFIRDRD*DGSWAG Trigger: GCCCGCCCAGCTTCCATCCCAGTCTCTATCCCTGAT...AAAGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGTAGCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGTAGGAGACAGGTCCAAGGAATGGAAGGCCCAGGTCTTTCTCCAGGTAGAGGAAAACTCACAGTaGAACACGACAATGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVGDRSKEWKAQVFLQVEENSQ*NTTMTR Trigger: GCGTGTCATTGTCGTGTTCCACTGTGAGTTTTCCTC...TACCTGGAGAAAGACCTGGGCCTTCCATTCCTTGGACCTGTCTCCTACACTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCACATCCCAGGAGCTTCTaGGGTAGGGAATTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGQGLPNKAFFMGCSVRAHPRSF*GREFIL Trigger: GAGAATAAATTCCCTACCTCAGAAGCTCCTGGGATG...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGCTACCATTTGGCTTCAGAGCTTCTTCAGGCGACTGTACATCTCTCTGCTTGGGGTACTCATTaGCGAGCCTATCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGCYHLASELLQATVHLSAWGTH*RAYLSL Trigger: GAGAGAGAGATAGGCTCGGCAATGAGTACCCCAAGC...AGAGAGATGTACAGTCGCCTGAAGAAGCTCTGAAGCCAAATGGTAGCAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GGATATCAACAGGCAGGCACCAAAACAGGCTGTGCAGAATCAAAGCAGCCTGGCGAGGAAAACTCACAGTaGAACACGACAATGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: GYQQAGTKTGCAESKQPGEENSQ*NTTMTR Trigger: GCGTGTCATTGTCGTGTTCCACTGTGAGTTTTCCTC...GCCAGGCTGCTTTGATTCTGCACAGCCTGTTTTGGTGCCTGCCTGTTGATATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACTCTAGAGAATCAGAGTaGCTCCTCTTCAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWQTVLTGKDSYRTEECNSRESE*LLFRAG Trigger: CCCAGCCCTGAAGAGGAGCCACTCTGATTCTCTAGA...GTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTTTCGCTTTTACAGGTGACTaGGGTATAAAAAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFQPIFGIWPAALGRLFAFTGD*GIKRGL Trigger: CAGTCCTCTTTTTATACCCCAGTCACCTGTAAAAGC...GAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCTCTCAATGGTTCCTTTaGGGGAAGACATCAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGSQWFL*GKTSGI Trigger: TATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGA...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTTTCTCTCCTCGTGACAGGTCTCAATGGTTCCTTTaGGGGAAGACATCAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: IFGIWPAALGRLFSPRDRSQWFL*GKTSGI Trigger: TATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGA...CCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | AGCAATACTGGTCTGCAGCGCCTCCTAGGGGTGACTGAGCTCCTTGCGCTGTTCGCCATTCAAAACAGATaGCATAATTTCTGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNTGLQRLLGVTELLALFAIQNR*HNFWRN Trigger: ATTTCTCCAGAAATTATGGCATCTGTTTTGAATGGC...GAACAGCGCAAGGAGCTCAGTCACCCCTAGGAGGCGCTGCAGACCAGTATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGAGCACCAAAATGTTCTCAATaGTTCCTTTGGGGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TGQGLPNKAFFMGCSVRAPKCSQ*FLWGKT Trigger: TGTCTTCCCCCAAAGGAACCATTGAGAACATTTTGG...TGCTCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGGCTTTTACAGGTGACTaGGGTATAAAAAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVLTGKDSYRTEECNGRAFTGD*GIKRGL Trigger: CAGTCCTCTTTTTATACCCCAGTCACCTGTAAAAGC...CCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCATCCACGAGGCCCTCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCTCCTATAAGGTCTCTTaGGTCACTGTCCAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHPRGPLLPSSLSLVFGSYKVS*VTVQNV Trigger: AACATTTTGGACAGTGACCCAAGAGACCTTATAGGA...GCCAAATACCAAAGATAGGCTGGAAGGGAGGAGAGGGCCTCGTGGATGACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | GTGACAGGCCAGGGTCTACCCAATAAGGCCTTCTTCATGGGATGCTCAGTGAGATCCTATAAGGTCTCTTaGGTCACTGTCCAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTGQGLPNKAFFMGCSVRSYKVS*VTVQNV Trigger: AACATTTTGGACAGTGACCCAAGAGACCTTATAGGA...TCTCACTGAGCATCCCATGAAGAAGGCCTTATTGGGTAGACCCTGGCCTGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTAGATGCAGGTCGTATTaGCTTTTTAAATTCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPFQPIFGIWPAALGRLRCRSY*LFKFKC Trigger: GCATTTGAATTTAAAAAGCCAATACGACCTGCATCT...AAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTCCTGACAGGGAAGGACTCTTACAGAACAGAAGAGTGTAACGGCAGGGCCATTCAAAACAGATaGCATAATTTCTGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLTGKDSYRTEECNGRAIQNR*HNFWRN Trigger: ATTTCTCCAGAAATTATGGCATCTGTTTTGAATGGC...CCTGCCGTTACACTCTTCTGTTCTGTAAGAGTCCTTCCCTGTCAGGACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCTAGGATGATAAAACTCTACCTAGAATGGCAGTATTTTGACTTAATGAAGTTTTCTCACAGTCACTaGCCAGTCCTTCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APRMIKLYLEWQYFDLMKFSHSH*PVLPAG Trigger: ACCAGCTGGAAGGACTGGGCAGTGACTGTGAGAAAA...CTTCATTAAGTCAAAATACTGCCATTCTAGGTAGAGTTTTATCATCCTAGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTAGGATGATAAAACTCTACCTAGAATGGCAGTATTTTGACTTAATGAAGTGTACATCTCTCTTTTaGTCTTTTCTCCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APRMIKLYLEWQYFDLMKCTSLF*SFLLPR Trigger: CCTGGGCAGGAGAAAAGAGCAAAAGAGAGATGTACA...CTTCATTAAGTCAAAATACTGCCATTCTAGGTAGAGTTTTATCATCCTAGGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS GCA 90 bp | AGTCCGCCAGCAGCTGACGCGCCAAACAGCATCTTCCCCGTGGGCTaGGGCGCAGGCGTGGGGCTGCAAGCGAAGAACAGGCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPAADAPNSIFPVG*GAGVGLQAKNRRRR Trigger: CCGCCGCCGCCTGTTCTTCGCTTGCAGCCCCACGCCTGCGCCGCAGCCCACGGGGAAGATGCTGTTTGGCGCGTCAGCTGCTGGCGGACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198848.2 |
||
| CDS CCA 90 bp | GGGACAGTCCGCCAGCAGCTGACGCGCCAAACAGCATCTTCCCCGTaGGCTGCGGCGCAGGCGTGGGGCTGCAAGCGAAGAACAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTVRQQLTRQTASSP*AAAQAWGCKRRTGG Trigger: GCCGCCTGTTCTTCGCTTGCAGCCCCACGCCTGCGCCGCAGCCCACGGGGAAGATGCTGTTTGGCGCGTCAGCTGCTGGCGGACTGTCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198848.2 |
||
| CDS CCA 90 bp | GCTCCTCGTGAGACCGGTCTGCTCTCTTCAACACCGCCCGAGTGCTaGAGCCGCACGGGGAAGGGGAGTCAAACAGCCCGCAACGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: APRETGLLSSTPPEC*SRTGKGSQTARNDR Trigger: CCGATCGTTGCGGGCTGTTTGACTCCCCTTCCCCGTGCGGCTCCAGCACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS GCA 90 bp | CTTCCTCCTCTTTGTACCCCGAGGAGGCTCCTCGTGAGACCGGTCTaGTCTCTTCAACACCGCCCGAGTGCTGGAGCCGCACGGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPLCTPRRLLVRPV*SLQHRPSAGAARGR Trigger: CCTTCCCCGTGCGGCTCCAGCACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAGAGGAGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 90 bp | CTGGGCACACTCTTCCTCCTCTTTGTACCCCGAGGAGGCTCCTCGTaGGACCGGTCTGCTCTCTTCAACACCGCCCGAGTGCTGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLFLLFVPRGGSS*DRSALFNTARVLEP Trigger: CGGCTCCAGCACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAGAGGAGGAAGAGTGTGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CCA 90 bp | GTTCCTTTGGGGGAAGACATCAGGGATAGAGACTGGGATGGAAGCTaGGCGGGCTCCGGAACATCCGCCTTCGCCTTCACAGGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPLGEDIRDRDWDGS*AGSGTSAFAFTGLG Trigger: GCCCAGCCCTGTGAAGGCGAAGGCGGATGTTCCGGAGCCCGCCCAGCTTCCATCCCAGTCTCTATCCCTGATGTCTTCCCCCAAAGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS-3UTR CAA 90 bp | ACACCAGCCACTGTCATGGGGACGTGGGGTGAGGAGTGGAGACAAGACTTTCCCGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPATVMGTWGEEWRQDFPAQVRL*VRNFFR Trigger: CCTAAAGAAGTTCCGCACCAAGAGCCGGACCTGGGC...GGGAAAGTCTTGTCTCCACTCCTCACCCCACGTCCCCATGACAGTGGCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS TCA 90 bp | AGTCAAACAGCCCGCAACGATCGGCAAGGTTTGCAGGTCTCCTCATaGCAAGGGGAGCTGTCCAGAGGCTTGCCATGCATGATGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQTARNDRQGLQVSS*QGELSRGLPCMMGS Trigger: AGACCCCATCATGCATGGCAAGCCTCTGGACAGCTCCCCTTGTCATGAGGAGACCTGCAAACCTTGCCGATCGTTGCGGGCTGTTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CCA 90 bp | ATGTTCTCAATGGTTCCTTTGGGGGAAGACATCAGGGATAGAGACTaGGATGGAAGCTGGGCGGGCTCCGGAACATCCGCCTTCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MFSMVPLGEDIRDRD*DGSWAGSGTSAFAF Trigger: GAAGGCGAAGGCGGATGTTCCGGAGCCCGCCCAGCTTCCATCCCAGTCTCTATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CCA 90 bp | TTTCTCACTTCCATTTTCTCACAGTCACTGCCCAGTCCTTCCAGCTaGTCCATGGTGACCGTCAGGTTGGTGACAGGGGACAGTCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLTSIFSQSLPSPSS*SMVTVRLVTGDSPP Trigger: TGGCGGACTGTCCCCTGTCACCAACCTGACGGTCACCATGGACCAGCTGGAAGGACTGGGCAGTGACTGTGAGAAAATGGAAGTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198848.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAGTGTAACGGCAGGGTGCCCTAGGCTCCAACCTGGGAGTGTAGGAGACTTCTCAATGGTTCCTTaGGGGGAAGACATCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKSVTAGCPRLQPGSVGDFSMVP*GEDIRD Trigger: ATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGAA...GTCTCCTACACTCCCAGGTTGGAGCCTAGGGCACCCTGCCGTTACACTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS TCA 90 bp | AGGTCTCCTCATGACAAGGGGAGCTGTCCAGAGGCTTGCCATGCATaGTGGGGTCTCCTCATCATTCTTCATATTCTCGCCATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPHDKGSCPEACHA*WGLLIILHILAIQK Trigger: CTTCTGGATGGCGAGAATATGAAGAATGATGAGGAGACCCCATCATGCATGGCAAGCCTCTGGACAGCTCCCCTTGTCATGAGGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CAA 90 bp | GGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAGGGATTCTCAATGGTTCCTTaGGGGGAAGACATCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTVQLAPLLTALQQREKGFSMVP*GEDIRD Trigger: ATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGAA...TCCCTTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCCTTCCAGCCTATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTATGAGACCGGCAAACTaGCCATTCAAAACAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPFQPIFGIWPAALGRLMRPAN*PFKTDA Trigger: GGCATCTGTTTTGAATGGCAAGTTTGCCGGTCTCAT...AAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGATAGGCTGGAAGGGAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CAA 90 bp | ATCTTTGGTATTTGGCCAGCAGCACTTGGGCGGCTTTTCTCTCCTCGTGACAGGATGAGACCGGCAAACTaGCCATTCAAAACAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: IFGIWPAALGRLFSPRDRMRPAN*PFKTDA Trigger: GGCATCTGTTTTGAATGGCAAGTTTGCCGGTCTCAT...CCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS-3UTR CAA 90 bp | TCCAGGTACCGTACAGCTGGCCCCTTTGCTTACTGCTCTGCAGCAAAGGGAAAAACGACAATGACACGCTaGCCATCAGTAGGCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: SRYRTAGPFAYCSAAKGKTTMTR*PSVGTI Trigger: TATTGTGCCTACTGATGGCAAGCGTGTCATTGTCGT...TTTTCCCTTTGCTGCAGAGCAGTAAGCAAAGGGGCCAGCTGTACGGTACCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CCA 90 bp | ACATATCGGCACATTCGAGGGCCTCTTTCAGAGGAAAACTCACAGTaGAACACGACAATGACACGCTTGCCATCAGTAGGCACAATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TYRHIRGPLSEENSQ*NTTMTRLPSVGTIG Trigger: CCCTATTGTGCCTACTGATGGCAAGCGTGTCATTGTCGTGTTCCACTGTGAGTTTTCCTCTGAAAGAGGCCCTCGAATGTGCCGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS TCA 90 bp | TCAGAGTGGCTCCTCTTCAGGGCTGGGCTACATCCCAGGAGCTTCTaGGGTAGGGAATTTATTCTCGTCAGGGAAATTTCAAGGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEWLLFRAGLHPRSF*GREFILVREISRFS Trigger: AGAAAACCTTGAAATTTCCCTGACGAGAATAAATTCCCTACCTCAGAAGCTCCTGGGATGTAGCCCAGCCCTGAAGAGGAGCCACTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CCA 90 bp | TTCACAGTGAGAATTCGAGGGCCTCTTTCAGAGGAAAACTCACAGTaGAACACGACAATGACACGCTTGCCATCAGTAGGCACAATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTVRIRGPLSEENSQ*NTTMTRLPSVGTIG Trigger: CCCTATTGTGCCTACTGATGGCAAGCGTGTCATTGTCGTGTTCCACTGTGAGTTTTCCTCTGAAAGAGGCCCTCGAATTCTCACTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199787.3 |
||
| CDS GCA 90 bp | TCAAGGCTGAATCGGTCGATTCTGAGGAGCCCATTCTCTGTAGACTaGTGTTATTTCTCACTTCCATTTTCTCACAGTCACTGCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLNRSILRSPFSVD*CYFSLPFSHSHCPV Trigger: GACTGGGCAGTGACTGTGAGAAAATGGAAGTGAGAAATAACAGCAGTCTACAGAGAATGGGCTCCTCAGAATCGACCGATTCAGCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198848.2 |
||
| CDS TCA 90 bp | GGGTCTCCTCATCATTCTTCATATTCTCGCCATCCAGAAGGTCTATaGAGCCATCATCCTCATCGGACAAAGTGGCTTTTACAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSPHHSSYSRHPEGL*SHHPHRTKWLLQVT Trigger: AGTCACCTGTAAAAGCCACTTTGTCCGATGAGGATGATGGCTTCATAGACCTTCTGGATGGCGAGAATATGAAGAATGATGAGGAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS GCA 90 bp | AGAAACCTGAATCGGTCGATTCTGAGGAGCCCATTCTCTGTAGACTaGTGTTATTTCTCACTTCCATTTTCTCACAGTCACTGCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RNLNRSILRSPFSVD*CYFSLPFSHSHCPV Trigger: GACTGGGCAGTGACTGTGAGAAAATGGAAGTGAGAAATAACAGCAGTCTACAGAGAATGGGCTCCTCAGAATCGACCGATTCAGGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094324.8 |
||
| CDS CCA 90 bp | GTGCAGATTCACGGCACCCTTGATGTGACCTCCTTCATACTCATATaGGTATCGGCAGTCAATGATAACAAACTCTTTAATGAGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQIHGTLDVTSFILI*VSAVNDNKLFNETG Trigger: GCCGGTCTCATTAAAGAGTTTGTTATCATTGACTGCCGATACCCATATGAGTATGAAGGAGGTCACATCAAGGGTGCCGTGAATCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 90 bp | AATTCAAATGCTTCATTTTCTTTATTTTCATCCTGGTCGATGAGGTaGAAGGTGTCGTGGTCTAGAGAATCAGAGTGGCTCCTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSNASFSLFSSWSMR*KVSWSRESEWLLFR Trigger: CCTGAAGAGGAGCCACTCTGATTCTCTAGACCACGACACCTTTCACCTCATCGACCAGGATGAAAATAAAGAAAATGAAGCATTTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CCA 90 bp | ATGAAGCCATCATCCTCATCGGACAAAGTGGCTTTTACAGGTGACTaGGGTATAAAAAGAGGACTGAAATTTCCTGATTCACTTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: MKPSSSSDKVAFTGD*GIKRGLKFPDSLSF Trigger: AAATGAAAGTGAATCAGGAAATTTCAGTCCTCTTTTTATACCCCAGTCACCTGTAAAAGCCACTTTGTCCGATGAGGATGATGGCTTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CCA 72 bp | GAGACCGGTCTGCTCTCTTCAACACCGCCCGAGTGCTaGAGCCGCACGGGGAAGGGGAGTCAAACAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ETGLLSSTPPEC*SRTGKGSQTAR Trigger: GCGGGCTGTTTGACTCCCCTTCCCCGTGCGGCTCCAGCACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CAA 72 bp | CCCAGTCCTTCCAGCTGGTCCATGGTGACCGTCAGGTaGGTGACAGGGGACAGTCCGCCAGCAGCTGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSPSSWSMVTVR*VTGDSPPAADA Trigger: CGCGTCAGCTGCTGGCGGACTGTCCCCTGTCACCAACCTGACGGTCACCATGGACCAGCTGGAAGGACTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198848.2 |
||
| CDS CAA 90 bp | CAGTCACTGCCCAGTCCTTCCAGCTGGTCCATGGTGACCGTCAGGTaGGTGACAGGGGACAGTCCGCCAGCAGCTGACGCGCCAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLPSPSSWSMVTVR*VTGDSPPAADAPNS Trigger: GCTGTTTGGCGCGTCAGCTGCTGGCGGACTGTCCCCTGTCACCAACCTGACGGTCACCATGGACCAGCTGGAAGGACTGGGCAGTGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198848.2 |
||
| CDS CAA 72 bp | TCGCCTTCACAGGGCTGGGCACACTCTTCCTCCTCTTaGTACCCCGAGGAGGCTCCTCGTGAGACCGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSQGWAHSSSS*YPEEAPRETGL Trigger: CAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAGAGGAGGAAGAGTGTGCCCAGCCCTGTGAAGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CAA 90 bp | CATCCGCCTTCGCCTTCACAGGGCTGGGCACACTCTTCCTCCTCTTaGTACCCCGAGGAGGCTCCTCGTGAGACCGGTCTGCTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPSPSQGWAHSSSS*YPEEAPRETGLLSS Trigger: TGAAGAGAGCAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAGAGGAGGAAGAGTGTGCCCAGCCCTGTGAAGGCGAAGGCGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 72 bp | CTCTTCCTCCTCTTTGTACCCCGAGGAGGCTCCTCGTaGGACCGGTCTGCTCTCTTCAACACCGCCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLLFVPRGGSS*DRSALFNTARV Trigger: CACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAGAGGAGGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 72 bp | GCCCGCAACGATCGGCAAGGTTTGCAGGTCTCCTCATaGCAAGGGGAGCTGTCCAGAGGCTTGCCATGCATG | + |
|
Preference number: 6 (lower is better) Translates to: ARNDRQGLQVSS*QGELSRGLPCM Trigger: CATGCATGGCAAGCCTCTGGACAGCTCCCCTTGTCATGAGGAGACCTGCAAACCTTGCCGATCGTTGCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CCA 72 bp | ATGGTTCCTTTGGGGGAAGACATCAGGGATAGAGACTaGGATGGAAGCTGGGCGGGCTCCGGAACATCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: MVPLGEDIRDRD*DGSWAGSGTSA Trigger: GGCGGATGTTCCGGAGCCCGCCCAGCTTCCATCCCAGTCTCTATCCCTGATGTCTTCCCCCAAAGGAACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 72 bp | CATGACAAGGGGAGCTGTCCAGAGGCTTGCCATGCATaGTGGGGTCTCCTCATCATTCTTCATATTCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HDKGSCPEACHA*WGLLIILHILA Trigger: GGCGAGAATATGAAGAATGATGAGGAGACCCCATCATGCATGGCAAGCCTCTGGACAGCTCCCCTTGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CAA 90 bp | ATAAGGTCTCTTGGGTCACTGTCCAAAATGTTCTCAATGGTTCCTTaGGGGGAAGACATCAGGGATAGAGACTGGGATGGAAGCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IRSLGSLSKMFSMVP*GEDIRDRDWDGSWA Trigger: CGCCCAGCTTCCATCCCAGTCTCTATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGAACATTTTGGACAGTGACCCAAGAGACCTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 72 bp | CTCCTCTTCAGGGCTGGGCTACATCCCAGGAGCTTCTaGGGTAGGGAATTTATTCTCGTCAGGGAAATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFRAGLHPRSF*GREFILVREIS Trigger: TGAAATTTCCCTGACGAGAATAAATTCCCTACCTCAGAAGCTCCTGGGATGTAGCCCAGCCCTGAAGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CAA 72 bp | GAGGAAAACTCACAGTGGAACACGACAATGACACGCTaGCCATCAGTAGGCACAATAGGGTTCTTAAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: EENSQWNTTMTR*PSVGTIGFLSK Trigger: CTTACTTAAGAACCCTATTGTGCCTACTGATGGCAAGCGTGTCATTGTCGTGTTCCACTGTGAGTTTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS TCA 72 bp | CATCATTCTTCATATTCTCGCCATCCAGAAGGTCTATaGAGCCATCATCCTCATCGGACAAAGTGGCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HHSSYSRHPEGL*SHHPHRTKWLL Trigger: TAAAAGCCACTTTGTCCGATGAGGATGATGGCTTCATAGACCTTCTGGATGGCGAGAATATGAAGAATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CCA 72 bp | CACGGCACCCTTGATGTGACCTCCTTCATACTCATATaGGTATCGGCAGTCAATGATAACAAACTCTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HGTLDVTSFILI*VSAVNDNKLFN Trigger: ATTAAAGAGTTTGTTATCATTGACTGCCGATACCCATATGAGTATGAAGGAGGTCACATCAAGGGTGCCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CCA 72 bp | TCATCCTCATCGGACAAAGTGGCTTTTACAGGTGACTaGGGTATAAAAAGAGGACTGAAATTTCCTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSDKVAFTGD*GIKRGLKFPDS Trigger: TGAATCAGGAAATTTCAGTCCTCTTTTTATACCCCAGTCACCTGTAAAAGCCACTTTGTCCGATGAGGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS GCA 72 bp | AAAGGGATCTTTACTCTCCTCGTAGATGTGACGAGATaGAGGTCGTATTGGCTTTTTAAATTCAAATGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KGIFTLLVDVTR*RSYWLFKFKCF Trigger: GAAGCATTTGAATTTAAAAAGCCAATACGACCTGCATCTCGTCACATCTACGAGGAGAGTAAAGATCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 |
||
| CDS CAA 90 bp | TATCGGCAGTCAATGATAACAAACTCTTTAATGAGACCGGCAAACTaGCCATTCAAAACAGATGCCATAATTTCTGGAGAAATATATTTC | + |
|
Preference number: 6 (lower is better) Translates to: YRQSMITNSLMRPAN*PFKTDAIISGEIYF Trigger: GAAATATATTTCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCGGTCTCATTAAAGAGTTTGTTATCATTGACTGCCGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||
| CDS CAA 72 bp | TCAATGATAACAAACTCTTTAATGAGACCGGCAAACTaGCCATTCAAAACAGATGCCATAATTTCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SMITNSLMRPAN*PFKTDAIISGE Trigger: TTCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCGGTCTCATTAAAGAGTTTGTTATCATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094324.8 ENSMUST00000198308.5 ENSMUST00000199787.3 |
||