Pregenerated sensors for CDC23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024370Ensembl transcript IDs: ENSMUST00000025228.12, ENSMUST00000133181.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACAGCTGAGCTCCCTGCATGCAGAGGACAGGCACCAAGCATGGTaGGCTTCGCTCCGTTCTTGTCTACCCCTCTCAGCAGCGCCGAAA | + |
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Preference number: 1 (lower is better) Translates to: SQLSSLHAEDRHQAW*ASLRSCLPLSAAPK Trigger: TTTCGGCGCTGCTGAGAGGGGTAGACAAGAACGGAGCGAAGCTCACCATGCTTGGTGCCTGTCCTCTGCATGCAGGGAGCTCAGCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 90 bp | CCGTTCTTGTCTACCCCTCTCAGCAGCGCCGAAACCTTGCTTCTGTaGCATCACTGCTGGTTAAGTGTTGTAAAAGGGATTCCTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: PFLSTPLSSAETLLL*HHCWLSVVKGIPWG Trigger: CCCCCAAGGAATCCCTTTTACAACACTTAACCAGCAGTGATGCCACAGAAGCAAGGTTTCGGCGCTGCTGAGAGGGGTAGACAAGAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR TCA 90 bp | GGTGCTAGTGAAACTGGACCTTCAGAAAAAGGCAGCCTGCATTGCTaGGCAGTATCACACTGTGCTAAAGCTCCAAGGCCAAGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GASETGPSEKGSLHC*AVSHCAKAPRPSLC Trigger: GCAGAGGCTTGGCCTTGGAGCTTTAGCACAGTGTGATACTGCTCAGCAATGCAGGCTGCCTTTTTCTGAAGGTCCAGTTTCACTAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 90 bp | CTCCAGAAACTAGGACAGTCTCTGCAGTCAGCAGAAAGAGCCTGTTaGCACAGCACCGGAGCAGGAAAACTTCGTCAAGCATTAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: LQKLGQSLQSAERAC*HSTGAGKLRQALTN Trigger: GTTGGTTAATGCTTGACGAAGTTTTCCTGCTCCGGTGCTGTGGCAACAGGCTCTTTCTGCTGACTGCAGAGACTGTCCTAGTTTCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 90 bp | GGTGGTTCCATAGGCTGTCCCTCAGGCTGTTTCTGTCTAGGTCCTTaGGAAAACAGACGTGACTGCTCTTTACTGCAGGTAAGGTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: GGSIGCPSGCFCLGP*ENRRDCSLLQVRFD Trigger: ATCAAACCTTACCTGCAGTAAAGAGCAGTCACGTCTGTTTTCCCAAGGACCTAGACAGAAACAGCCTGAGGGACAGCCTATGGAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 90 bp | ATGTCAAAACACCCACCTGCCTGTCTCCAAATGGGATTAAAGACATaGACCACCACATGGCACCCAGTTAGTGTTCCTTCCATTAAATGG | + |
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Preference number: 1 (lower is better) Translates to: MSKHPPACLQMGLKT*TTTWHPVSVPSIKW Trigger: CCATTTAATGGAAGGAACACTAACTGGGTGCCATGTGGTGGTGCATGTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTGTTTTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGGGCGGTCACAGAGGCTaGCAGCGTCTGCCTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: GVCLTLDNCALSFPLRSGGGHRG*QRLPPL Trigger: GAGTGGAGGCAGACGCTGCCAGCCTCTGTGACCGCC...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGAGGCTGGCAGCGTCTaGCTCCACTCAGCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RARNSVAGSQTAASGTTVEAGSV*LHSAVP Trigger: TGGAACTGCTGAGTGGAGGCAGACGCTGCCAGCCTC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTTGCTATGTCAAAACACCCACCTGCCTGTCTCCAAATGGGATTAAAGACGCTGAGCTCCCTGCATaGAGAGGACAGGCACCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GSCYVKTPTCLSPNGIKDAELPA*RGQAPS Trigger: GCTTGGTGCCTGTCCTCTGCATGCAGGGAGCTCAGC...GTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTGTTTTGACATAGCAACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAAGGGAGCACTGCTAGCTaGCTGCAGAAGACCATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SAKKRLGANQENQQPNHQGSTAS*LQKTIF Trigger: AAAGATGGTCTTCTGCAGCCAGCTAGCAGTGCTCCC...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGAGGTTGGGTGCTAAGTGCCCTCACCAGCTAAGCCAGCTCACCAGCCTCGTTCCTTCCATTAAATaGGGAGTAAAATGTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LSRLGAKCPHQLSQLTSLVPSIK*GVKCSE Trigger: CTCAGAACATTTTACTCCCCATTTAATGGAAGGAAC...GAGGCTGGTGAGCTGGCTTAGCTGGTGAGGGCACTTAGCACCCAACCTCGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCGAGGTTGGGTGCTAAGTGCCCTCACCAGCTAAGCCAGCTCACCAGCCTCAAGTCTGTCTTCAAATaGCTGTTGATTGATTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LSRLGAKCPHQLSQLTSLKSVFK*LLIDFG Trigger: GCCAAAATCAATCAACAGCCATTTGAAGACAGACTT...GAGGCTGGTGAGCTGGCTTAGCTGGTGAGGGCACTTAGCACCCAACCTCGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCCTCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATGGGAGTAAAATGTTCTaGGTACAAGAGAAGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: QASAKKRLGANQENQQPNGSKMF*VQEKEG Trigger: GCCTTCCTTCTCTTGTACTCAGAACATTTTACTCCC...ATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGAGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACTCTTTCAGAATATAAGACTGCTACGGACAGAGCTCCAGAAACTAGGACAGCAGAAAGAGCCTGTTaGCACAGCACCGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: STLSEYKTATDRAPETRTAERAC*HSTGAG Trigger: TCCTGCTCCGGTGCTGTGGCAACAGGCTCTTTCTGC...TGTCCTAGTTTCTGGAGCTCTGTCCGTAGCAGTCTTATATTCTGAAAGAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAATTCTGTCTAGGTCCTTaGGAAAACAGACGTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: SAKKRLGANQENQQPNHQFCLGP*ENRRDC Trigger: GCAGTCACGTCTGTTTTCCCAAGGACCTAGACAGAA...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTGAGGCAGAAAGGCCACAGGCTAGGATACACAGAAACCCTGTCTTTAAAGAAACCTTGCTTCTGTaGCATCACTGCTGGTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: EAEAERPQARIHRNPVFKETLLL*HHCWLS Trigger: ACTTAACCAGCAGTGATGCCACAGAAGCAAGGTTTC...TTTAAAGACAGGGTTTCTGTGTATCCTAGCCTGTGGCCTTTCTGCCTCAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR TCA 90 bp | TCTACTCTTTCAGAATATAAGACTGCTACGGACAGAGCTCCAGAAACTAGGACAAAAGAAAGTCACAGCTaGGCTCCCTGCATGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: STLSEYKTATDRAPETRTKESHS*APCMQR Trigger: CCTCTGCATGCAGGGAGCTCAGCTGTGACTTTCTTT...TGTCCTAGTTTCTGGAGCTCTGTCCGTAGCAGTCTTATATTCTGAAAGAGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACTCTTTCAGAATATAAGACTGCTACGGACAGAGCTCCAGAAACTAGGACACCCCCACCATATTTCTaGCTGCCTCTGAAGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: STLSEYKTATDRAPETRTPPPYF*LPLKVV Trigger: AACCACCTTCAGAGGCAGGCAGAAATATGGTGGGGG...TGTCCTAGTTTCTGGAGCTCTGTCCGTAGCAGTCTTATATTCTGAAAGAGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CAA 90 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTaGTCTGGCCAGGAAGTTGCTATGTCAAAACACCCACCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EMSTILNDTQEAWVA*SGQEVAMSKHPPAC Trigger: ACAGGCAGGTGGGTGTTTTGACATAGCAACTTCCTGGCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCTCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATTTTAGAAGGCTGCTTTaGAAAACTACACAAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: QASAKKRLGANQENQQPNFRRLL*KTTQDH Trigger: ATGATCTTGTGTAGTTTTCCAAAGCAGCCTTCTAAA...ATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGAGGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CAA 90 bp | AGCTCACCAGCCTCCGGCTTCCTTAAGTCTGTCTTCAAATGGCTGTaGATTGATTTTGGCCACAATCTGATTTCTACTCTTTCAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SSPASGFLKSVFKWL*IDFGHNLISTLSEY Trigger: ATATTCTGAAAGAGTAGAAATCAGATTGTGGCCAAAATCAATCAACAGCCATTTGAAGACAGACTTAAGGAAGCCGGAGGCTGGTGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTTGCTATGTCAAAACACCCACCTGCCTGTCTCCAAATGGGATTAAAGACCCTAGAAAAACACAGTaGATTCTTCAACCTTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GSCYVKTPTCLSPNGIKDPRKTQ*ILQPCR Trigger: TCTACAAGGTTGAAGAATTCACTGTGTTTTTCTAGG...GTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTGTTTTGACATAGCAACTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACTCTTTCAGAATATAAGACTGCTACGGACAGAGCTCCAGAAACTAGGACAGAAAGAAACCATTCCTaGGAAACTTACTTCCCCGAA | + |
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Preference number: 2 (lower is better) Translates to: STLSEYKTATDRAPETRTERNHS*ETYFPE Trigger: TTCGGGGAAGTAAGTTTCGCAGGAATGGTTTCTTTC...TGTCCTAGTTTCTGGAGCTCTGTCCGTAGCAGTCTTATATTCTGAAAGAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTTGTCTGGCAAGATTTTAGAAGGCTaGTTTGGAAAACTACACAAG | + |
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Preference number: 2 (lower is better) Translates to: EMSTILNDTQEAWVALSGKILEG*FGKLHK Trigger: CTTGTGTAGTTTTCCAAAGCAGCCTTCTAAAATCTT...GCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | CTAGGACAGTCTCTGCAGTCAGCAGAAAGAGCCTGTTaGCACAGCACCGGAGCAGGAAAACTTCGTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LGQSLQSAERAC*HSTGAGKLRQA Trigger: TGCTTGACGAAGTTTTCCTGCTCCGGTGCTGTGGCAACAGGCTCTTTCTGCTGACTGCAGAGACTGTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR TCA 72 bp | AGACCATCTTTCCCCCACCATATTTCTGCCTGCCTCTaGAGGTGGTTCCATAGGCTGTCCCTCAGGCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: RPSFPHHISACL*RWFHRLSLRLF Trigger: AAACAGCCTGAGGGACAGCCTATGGAACCACCTTCAGAGGCAGGCAGAAATATGGTGGGGGAAAGATGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | CTCAGCAGCGCCGAAACCTTGCTTCTGTGGCATCACTaGTGGTTAAGTGTTGTAAAAGGGATTCCTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSSAETLLLWHH*WLSVVKGIPWG Trigger: CCCCCAAGGAATCCCTTTTACAACACTTAACCAGCAGTGATGCCACAGAAGCAAGGTTTCGGCGCTGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | CACCCACCTGCCTGTCTCCAAATGGGATTAAAGACATaGACCACCACATGGCACCCAGTTAGTGTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HPPACLQMGLKT*TTTWHPVSVPS Trigger: GGAAGGAACACTAACTGGGTGCCATGTGGTGGTGCATGTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | GTATCACACTGTGCTAAAGCTCCAAGGCCAAGCCTCTaGCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCA | + |
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Preference number: 3 (lower is better) Translates to: VSHCAKAPRPSL*QKAAGSKPGKP Trigger: TGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGAGGCTTGGCCTTGGAGCTTTAGCACAGTGTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCTCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATTGTCTGGCCAGGAAGTaGCTATGTCAAAACACCCAC | + |
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Preference number: 3 (lower is better) Translates to: QASAKKRLGANQENQQPNCLARK*LCQNTH Trigger: GTGGGTGTTTTGACATAGCAACTTCCTGGCCAGACA...ATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGAGGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | CCAAGAGGCTTGGGTAGCTTTGTCTGGCCAGGAAGTTaGTATGTCAAAACACCCACCTGCCTGTCTCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: PRGLGSFVWPGS*YVKTPTCLSPN Trigger: ATTTGGAGACAGGCAGGTGGGTGTTTTGACATAGCAACTTCCTGGCCAGACAAAGCTACCCAAGCCTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR TCA 72 bp | GAAACTGGACCTTCAGAAAAAGGCAGCCTGCATTGCTaGGCAGTATCACACTGTGCTAAAGCTCCAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ETGPSEKGSLHC*AVSHCAKAPRP Trigger: TGGCCTTGGAGCTTTAGCACAGTGTGATACTGCTCAGCAATGCAGGCTGCCTTTTTCTGAAGGTCCAGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 72 bp | ATAGGCTGTCCCTCAGGCTGTTTCTGTCTAGGTCCTTaGGAAAACAGACGTGACTGCTCTTTACTGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: IGCPSGCFCLGP*ENRRDCSLLQV Trigger: TACCTGCAGTAAAGAGCAGTCACGTCTGTTTTCCCAAGGACCTAGACAGAAACAGCCTGAGGGACAGCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 72 bp | TCTACCCCTCTCAGCAGCGCCGAAACCTTGCTTCTGTaGCATCACTGCTGGTTAAGTGTTGTAAAAGGGATT | + |
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Preference number: 3 (lower is better) Translates to: STPLSSAETLLL*HHCWLSVVKGI Trigger: AATCCCTTTTACAACACTTAACCAGCAGTGATGCCACAGAAGCAAGGTTTCGGCGCTGCTGAGAGGGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | AACCAAATCATCAACCCCCAGGAAAGAAACCATTCCTaGGAAACTTACTTCCCCGAACACCTACCTGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: NQIINPQERNHS*ETYFPEHLPAK Trigger: TTTGGCAGGTAGGTGTTCGGGGAAGTAAGTTTCGCAGGAATGGTTTCTTTCCTGGGGGTTGATGATTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 72 bp | TCACCAGCCTCCGGCTTCCTTAAGTCTGTCTTCAAATaGCTGTTGATTGATTTTGGCCACAATCTGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: SPASGFLKSVFK*LLIDFGHNLIS Trigger: AGAAATCAGATTGTGGCCAAAATCAATCAACAGCCATTTGAAGACAGACTTAAGGAAGCCGGAGGCTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR GCA 72 bp | TGTTTCTGTCTAGGTCCTTGGGAAAACAGACGTGACTaGTCTTTACTGCAGGTAAGGTTTGATATTGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: CFCLGPWENRRD*SLLQVRFDIGL Trigger: TAGACCAATATCAAACCTTACCTGCAGTAAAGAGCAGTCACGTCTGTTTTCCCAAGGACCTAGACAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 72 bp | ACCACATGGCACCCAGTTAGTGTTCCTTCCATTAAATaGGGAGTAAAATGTTCTGAGTACAAGAGAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: TTWHPVSVPSIK*GVKCSEYKRRK Trigger: CTTCCTTCTCTTGTACTCAGAACATTTTACTCCCCATTTAATGGAAGGAACACTAACTGGGTGCCATGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR CCA 72 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTaGGTAGCTTTGTCTGGCCAGGAAGTTGCTATGTCA | + |
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Preference number: 3 (lower is better) Translates to: EMSTILNDTQEA*VALSGQEVAMS Trigger: TGACATAGCAACTTCCTGGCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTTGTCTGGCCACGAAGTTCTCTTCTaGTGTTGCTTCATCACATAT | + |
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Preference number: 3 (lower is better) Translates to: EMSTILNDTQEAWVALSGHEVLF*CCFITY Trigger: ATATGTGATGAAGCAACACAAGAAGAGAACTTCGTG...GCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGGACCATTTGCTGCTATaGAGCAGGCCCCGCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGDHLLL*SRPRSR Trigger: TCGGGAGCGGGGCCTGCTGCATAGCAGCAAATGGTC...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCCGCAGACCATTTGCTaGTATGCAGCAGGCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGPQTIC*YAAGPA Trigger: AGCGGGGCCTGCTGCATAGCAGCAAATGGTCTGCGG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCCTGGTGCTTCCGGCTaGGTTCCACTCTCAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGPGASG*VPLSVL Trigger: GAGAACTGAGAGTGGAACTCAGCCGGAAGCACCAGG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCTGGGCAGCCTGCTCTaGCTCAGTCAACTGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGLGSLL*LSQLFM Trigger: CATGAACAGTTGACTGAGTCAGAGCAGGCTGCCCAG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCTCAGCTGTAGGATCTaGCGGAGCAAGGCCTTACCT | + |
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Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGLSCRI*RSKALP Trigger: AGGTAAGGCCTTGCTCCGCCAGATCCTACAGCTGAG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGTTGCTATTGCAGCCGTaGAGGAAATGTGCCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMLLLQP*RKCAAR Trigger: CCGGGCGGCACATTTCCTTCACGGCTGCAATAGCAA...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGACTCCGCAGACCATTTaGTGCTATGCAGCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMTPQTI*CYAAGP Trigger: GGGGCCTGCTGCATAGCAGCAAATGGTCTGCGGAGT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGATCTCCATGTACTCGTaGCCCATCAGTGTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMISMYS*PISVQA Trigger: GGCCTGGACACTGATGGGGCACGAGTACATGGAGAT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | CTGCTAGCTGGCTGCAGAAGACCATCTTTCCCCCACCATATTTCTGCCTGCCTCGCCGTGAAGGAAATGTaGCGCCCGGTCATACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAGCRRPSFPHHISACLAVKEM*RPVILF Trigger: AAAGAGTATGACCGGGCGGCACATTTCCTTCACGGC...GAGGCAGGCAGAAATATGGTGGGGGAAAGATGGTCTTCTGCAGCCAGCTAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GCATTCGCCTGTAATGCTATCATTAGGGAGGCTGAGGCAGAAAGGCCACAGGCTATCTCCATGTACTCGTaGCCCATCAGTGTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFACNAIIREAEAERPQAISMYS*PISVQA Trigger: GGCCTGGACACTGATGGGGCACGAGTACATGGAGAT...AGCCTGTGGCCTTTCTGCCTCAGCCTCCCTAATGATAGCATTACAGGCGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCTAAGGCAACCAGCATaGGAGAATCATTGGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGLRQPA*ENHWDE Trigger: TTCGTCCCAATGATTCTCGCATGCTGGTTGCCTTAG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGTGGGTGTCTCCCCTTaGTTCCTCAGCTGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVVGVSP*FLSCRI Trigger: GATCCTACAGCTGAGGAACCAAGGGGAGACACCCAC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGGCGATGAGCAGCAGCTaGTTTTTAATTTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGAMSSS*FLISCK Trigger: CTTGCAGGAAATTAAAAAGCAGCTGCTGCTCATCGC...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAAGACCATTTGCTGCTATaGAGCAGGCCCCGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SAKKRLGANQENQQPNHQDHLLL*SRPRSR Trigger: TCGGGAGCGGGGCCTGCTGCATAGCAGCAAATGGTC...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGAGGCAGAAAGGCCACAGGCTAGGATACACAGAAACCCTGTCTTTAAAACTCCGCAGACCATTTaGTGCTATGCAGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EAEAERPQARIHRNPVFKTPQTI*CYAAGP Trigger: GGGGCCTGCTGCATAGCAGCAAATGGTCTGCGGAGT...TTTAAAGACAGGGTTTCTGTGTATCCTAGCCTGTGGCCTTTCTGCCTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGCCGTGAAGGAAATGTaGCGCCCGGTCATACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVAVKEM*RPVILF Trigger: AAAGAGTATGACCGGGCGGCACATTTCCTTCACGGC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGAGGCTTTCTTGCTATTaGAGCCGTGAAGGAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGRLSCY*SREGNV Trigger: CACATTTCCTTCACGGCTGCAATAGCAAGAAAGCCT...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | TTGTCGAGGTTGGGTGCTAAGTGCCCTCACCAGCTAAGCCAGCTCACCAGCCTCGGAAATAGGCTTTCTTaGTATTGCAGCCGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGAKCPHQLSQLTSLGNRLS*YCSREG Trigger: TCCTTCACGGCTGCAATAGCAAGAAAGCCTATTTCC...GAGGCTGGTGAGCTGGCTTAGCTGGTGAGGGCACTTAGCACCCAACCTCGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGGTAAGCCTGAATAGCTaGAGACGTGTTCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGVSLNS*RRVLHL Trigger: GAGATGAAGAACACGTCTGCAGCTATTCAGGCTTAC...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | TTGTCGAGGTTGGGTGCTAAGTGCCCTCACCAGCTAAGCCAGCTCACCAGCCTCGTAAGCCTGAATAGCTaGAGACGTGTTCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGAKCPHQLSQLTSLVSLNS*RRVLHL Trigger: GAGATGAAGAACACGTCTGCAGCTATTCAGGCTTAC...GAGGCTGGTGAGCTGGCTTAGCTGGTGAGGGCACTTAGCACCCAACCTCGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| 3UTR CAA 72 bp | CCGTTCTTGTCTACCCCTCTCAGCAGCGCCGAAACCTaGCTTCTGTGGCATCACTGCTGGTTAAGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFLSTPLSSAET*LLWHHCWLSVV Trigger: TACAACACTTAACCAGCAGTGATGCCACAGAAGCAAGGTTTCGGCGCTGCTGAGAGGGGTAGACAAGAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAATTGCTATTGCAGCCGTaGAGGAAATGTGCCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAKKRLGANQENQQPNHQLLLQP*RKCAAR Trigger: CCGGGCGGCACATTTCCTTCACGGCTGCAATAGCAA...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGAAAAGCCCACATCAATaGGATGCTGATACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGKSPHQ*DADTSA Trigger: TGCAGAAGTATCAGCATCTCATTGATGTGGGCTTTT...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGTATCTTGGATGTATTTaGTGTAACACTGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGYLGCI*CNTGQP Trigger: AGGCTGCCCAGTGTTACATCAAATACATCCAAGATA...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGCTGGAAATACAAAGCTaGTTTCTCATGCTGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMLEIQS*FLMLGA Trigger: CGCTCCCAGCATGAGAAAGCAGCTTTGTATTTCCAG...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | CTGCTAGCTGGCTGCAGAAGACCATCTTTCCCCCACCATATTTCTGCCTGCCTCCTGGAAATACAAAGCTaGTTTCTCATGCTGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLAGCRRPSFPHHISACLLEIQS*FLMLGA Trigger: CGCTCCCAGCATGAGAAAGCAGCTTTGTATTTCCAG...GAGGCAGGCAGAAATATGGTGGGGGAAAGATGGTCTTCTGCAGCCAGCTAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCCGGGTATCATTGAATaGACAACATTTTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGPGIIE*TTFLGT Trigger: TGTGCCCAAAAATGTTGTGCATTCAATGATACCCGG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR CCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCCATCAAAGTAGGCCTTaGCCAGGGTGTAAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVHQSRP*PGCKHP Trigger: TGGATGCTTACACCCTGGCCAAGGCCTACTTTGATG...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCTTTGTCGATATCTCTaGTATTGTGATAGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGLCRYL*YCDRQL Trigger: CAGTTGCCTATCACAATATCAGAGATATCGACAAAG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCCAGACTTCATGCTCCTaGCATAGAGAAGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVQTSCS*HREGWR Trigger: TCTCCAACCTTCTCTATGTCAGGAGCATGAAGTCTG...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCTGTAGTCTCTCTTGTTaGCCTCAATGGCATGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVCSLSC*PQWHVG Trigger: ACCGACATGCCATTGAGGTCAACAAGAGAGACTACA...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAACTGGGCAGCCTGCTCTaGCTCAGTCAACTGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAKKRLGANQENQQPNHQLGSLL*LSQLFM Trigger: CATGAACAGTTGACTGAGTCAGAGCAGGCTGCCCAG...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTAGCTGGCTGCAGAAGACCATCTTTCCCCCACCATATTTCTGCCTGCCTCGCGATGAGCAGCAGCTaGTTTTTAATTTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAGCRRPSFPHHISACLAMSSS*FLISCK Trigger: CTTGCAGGAAATTAAAAAGCAGCTGCTGCTCATCGC...GAGGCAGGCAGAAATATGGTGGGGGAAAGATGGTCTTCTGCAGCCAGCTAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGCTCCAGACAGGTATCTaGAATACATGTACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGLQTGI*NTCTGN Trigger: ATTTCCTGTACATGTATTCCAGATACCTGTCTGGAG...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGCATCTCTTTGTCTGTaGTCAGGTTACACAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVASLCL*SGYTAL Trigger: TAGAGCTGTGTAACCTGATCACAGACAAAGAGATGC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCTTTTTGGGCACAAGTTaGAGCTTCATCCCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVFLGTS*SFIPQL Trigger: AAGCTGTGGGATGAAGCTTCAACTTGTGCCCAAAAA...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGGAAATAGGCTTTCTTaGTATTGCAGCCGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVGNRLS*YCSREG Trigger: TCCTTCACGGCTGCAATAGCAAGAAAGCCTATTTCC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR TCA 90 bp | GCATTCGCCTGTAATGCTATCATTAGGGAGGCTGAGGCAGAAAGGCCACAGGCTTATCTTGGATGTATTTaGTGTAACACTGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AFACNAIIREAEAERPQAYLGCI*CNTGQP Trigger: AGGCTGCCCAGTGTTACATCAAATACATCCAAGATA...AGCCTGTGGCCTTTCTGCCTCAGCCTCCCTAATGATAGCATTACAGGCGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATTGTGATAGGCAACTaGAATTTGGGAAACAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLTLDNCALSFPLRSGIVIGN*NLGNNV Trigger: TACATTGTTTCCCAAATTGCAGTTGCCTATCACAAT...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCGTCTCCCACGGCATATaGTCTCCAATAACACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RARNSVAGSQTAASGTTVVSHGI*SPITLF Trigger: AAAAAGTGTTATTGGAGAGCATATGCCGTGGGAGAC...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGAACTTTAGGGCTCTCTaGAAATACAAAGCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMNFRAL*KYKAAF Trigger: GAAAGCAGCTTTGTATTTCCAGAGAGCCCTAAAGTT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | ATGGATAGCTCCACTCTAAACCTAATCTCTTATCCGAACAGTACACTCAGTAACCCTGGTGCTTCCGGCTaGGTTCCACTCTCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MDSSTLNLISYPNSTLSNPGASG*VPLSVL Trigger: GAGAACTGAGAGTGGAACTCAGCCGGAAGCACCAGG...GTTACTGAGTGTACTGTTCGGATAAGAGATTAGGTTTAGAGTGGAGCTATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | GCATTCGCCTGTAATGCTATCATTAGGGAGGCTGAGGCAGAAAGGCCACAGGCTCTTTGTCGATATCTCTaGTATTGTGATAGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AFACNAIIREAEAERPQALCRYL*YCDRQL Trigger: CAGTTGCCTATCACAATATCAGAGATATCGACAAAG...AGCCTGTGGCCTTTCTGCCTCAGCCTCCCTAATGATAGCATTACAGGCGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGCTTCCACTAGTTGATTaGGTTTCTCATAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMLPLVD*VSHNIL Trigger: GAGAATGTTATGAGAAACTCAATCAACTAGTGGAAG...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGAGGCAGAAAGGCCACAGGCTAGGATACACAGAAACCCTGTCTTTAAATTTTTGGGCACAAGTTaGAGCTTCATCCCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAEAERPQARIHRNPVFKFLGTS*SFIPQL Trigger: AAGCTGTGGGATGAAGCTTCAACTTGTGCCCAAAAA...TTTAAAGACAGGGTTTCTGTGTATCCTAGCCTGTGGCCTTTCTGCCTCAGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAACTAAGGCAACCAGCATaGGAGAATCATTGGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAKKRLGANQENQQPNHQLRQPA*ENHWDE Trigger: TTCGTCCCAATGATTCTCGCATGCTGGTTGCCTTAG...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCCTCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCCGGGTATCATTGAATaGACAACATTTTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QASAKKRLGANQENQQPNPGIIE*TTFLGT Trigger: TGTGCCCAAAAATGTTGTGCATTCAATGATACCCGG...ATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGAGGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGAATGCACAACATTTTTaGGCACAAGTTGAAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCLTLDNCALSFPLRSGMNAQHF*AQVEAS Trigger: TGAAGCTTCAACTTGTGCCCAAAAATGTTGTGCATT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR CCA 90 bp | AACAGACGTGACTGCTCTTTACTGCAGGTAAGGTTTGATATTGGTCTAGCAATGCTCAGCTGTAGGATCTaGCGGAGCAAGGCCTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NRRDCSLLQVRFDIGLAMLSCRI*RSKALP Trigger: AGGTAAGGCCTTGCTCCGCCAGATCCTACAGCTGAG...CATTGCTAGACCAATATCAAACCTTACCTGCAGTAAAGAGCAGTCACGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTTGTCTGGCGTGGGTGTCTCCCCTTaGTTCCTCAGCTGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EMSTILNDTQEAWVALSGVGVSP*FLSCRI Trigger: GATCCTACAGCTGAGGAACCAAGGGGAGACACCCAC...GCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | AACAGACGTGACTGCTCTTTACTGCAGGTAAGGTTTGATATTGGTCTAGCAATGCATCAAAGTAGGCCTTaGCCAGGGTGTAAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRRDCSLLQVRFDIGLAMHQSRP*PGCKHP Trigger: TGGATGCTTACACCCTGGCCAAGGCCTACTTTGATG...CATTGCTAGACCAATATCAAACCTTACCTGCAGTAAAGAGCAGTCACGTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATAGCTCCACTCTAAACCTAATCTCTTATCCGAACAGTACACTCAGTAACGTTGTTTGCAGACAGTaGGGCAGGGAGGAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDSSTLNLISYPNSTLSNVVCRQ*GREEKG Trigger: ACCTTTTTCCTCCCTGCCTCACTGTCTGCAAACAAC...GTTACTGAGTGTACTGTTCGGATAAGAGATTAGGTTTAGAGTGGAGCTATCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCAAAAAGCGGCTGGGAGCAAACCAGGAAAACCAGCAACCAAATCATCAACTCCAGACAGGTATCTaGAATACATGTACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKKRLGANQENQQPNHQLQTGI*NTCTGN Trigger: ATTTCCTGTACATGTATTCCAGATACCTGTCTGGAG...TTGATGATTTGGTTGCTGGTTTTCCTGGTTTGCTCCCAGCCGCTTTTTGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| 3UTR CAA 72 bp | AAAATTGATATAAATACCATCTGGCCTGTTAGACCCTaGGACAGGAACAGCAGTGGGAACCAGCCTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KIDINTIWPVRP*DRNSSGNQPNA Trigger: TGCATTAGGCTGGTTCCCACTGCTGTTCCTGTCCAAGGGTCTAACAGGCCAGATGGTATTTATATCAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCCATTAAATGGGGAGTAAAATGTTCTGAGTACAAGAGAAGGAAGGCTCAGACTTCATGCTCCTaGCATAGAGAAGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPSIKWGVKCSEYKRRKAQTSCS*HREGWR Trigger: TCTCCAACCTTCTCTATGTCAGGAGCATGAAGTCTG...AGCCTTCCTTCTCTTGTACTCAGAACATTTTACTCCCCATTTAATGGAAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCCATTAAATGGGGAGTAAAATGTTCTGAGTACAAGAGAAGGAAGGCTTGTAGTCTCTCTTGTTaGCCTCAATGGCATGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSIKWGVKCSEYKRRKACSLSC*PQWHVG Trigger: ACCGACATGCCATTGAGGTCAACAAGAGAGACTACA...AGCCTTCCTTCTCTTGTACTCAGAACATTTTACTCCCCATTTAATGGAAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| 3UTR CAA 72 bp | ACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTaGTCTGGCCAGGAAGTTGCTATGTCAAAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TILNDTQEAWVA*SGQEVAMSKHP Trigger: TGGGTGTTTTGACATAGCAACTTCCTGGCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS-3UTR TCA 90 bp | TCTACTCTTTCAGAATATAAGACTGCTACGGACAGAGCTCCAGAAACTAGGACAAAAAGCCCACATCAATaGGATGCTGATACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLSEYKTATDRAPETRTKSPHQ*DADTSA Trigger: TGCAGAAGTATCAGCATCTCATTGATGTGGGCTTTT...TGTCCTAGTTTCTGGAGCTCTGTCCGTAGCAGTCTTATATTCTGAAAGAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | ATGGATAGCTCCACTCTAAACCTAATCTCTTATCCGAACAGTACACTCAGTAACAGGCTTTCTTGCTATTaGAGCCGTGAAGGAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: MDSSTLNLISYPNSTLSNRLSCY*SREGNV Trigger: CACATTTCCTTCACGGCTGCAATAGCAAGAAAGCCT...GTTACTGAGTGTACTGTTCGGATAAGAGATTAGGTTTAGAGTGGAGCTATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTCCATTAAATGGGGAGTAAAATGTTCTGAGTACAAGAGAAGGAAGGCTGTCTCCCACGGCATATaGTCTCCAATAACACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPSIKWGVKCSEYKRRKAVSHGI*SPITLF Trigger: AAAAAGTGTTATTGGAGAGCATATGCCGTGGGAGAC...AGCCTTCCTTCTCTTGTACTCAGAACATTTTACTCCCCATTTAATGGAAGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| 3UTR CAA 72 bp | GGCAGGCACTCTACCACTAAGCTATGGCATTTCTCATaGCTAATGGTACCTGATCTCTTAAATGATAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHSTTKLWHFS*LMVPDLLNDKC Trigger: ACATTTATCATTTAAGAGATCAGGTACCATTAGCAATGAGAAATGCCATAGCTTAGTGGTAGAGTGCCTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS-3UTR TCA 90 bp | GTTCCTTCCATTAAATGGGGAGTAAAATGTTCTGAGTACAAGAGAAGGAAGGCTCTTCCACTAGTTGATTaGGTTTCTCATAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSIKWGVKCSEYKRRKALPLVD*VSHNIL Trigger: GAGAATGTTATGAGAAACTCAATCAACTAGTGGAAG...AGCCTTCCTTCTCTTGTACTCAGAACATTTTACTCCCCATTTAATGGAAGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATAGCTCCACTCTAAACCTAATCTCTTATCCGAACAGTACACTCAGTAACAATGCACAACATTTTTaGGCACAAGTTGAAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MDSSTLNLISYPNSTLSNNAQHF*AQVEAS Trigger: TGAAGCTTCAACTTGTGCCCAAAAATGTTGTGCATT...GTTACTGAGTGTACTGTTCGGATAAGAGATTAGGTTTAGAGTGGAGCTATCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGAGTACAATTTTAAATGATACCCAAGAGGCTTGGGTAGCTTTGTCTGGCATTGTGATAGGCAACTaGAATTTGGGAAACAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EMSTILNDTQEAWVALSGIVIGN*NLGNNV Trigger: TACATTGTTTCCCAAATTGCAGTTGCCTATCACAAT...GCCAGACAAAGCTACCCAAGCCTCTTGGGTATCATTTAAAATTGTACTCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS GCA 90 bp | GCATCCACATCCTGCGCGTCCTCCTCTGTCAGAGGCGGCGGCGGCTaGAGCTCCGACAAAGGCAAGGCGGGCAGAGAGAAGGCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASTSCASSSVRGGGG*SSDKGKAGREKANS Trigger: GGAGTTGGCCTTCTCTCTGCCCGCCTTGCCTTTGTCGGAGCTGCAGCCGCCGCCGCCTCTGACAGAGGAGGACGCGCAGGATGTGGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS TCA 90 bp | GAGGCCCGCGATGAGCAGCAGCTGCTTTTTAATTTCCTGCAAGTCTaGAAAATCCGCGACAGTGGATACGCCCGGCACCGCCGTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EARDEQQLLFNFLQV*KIRDSGYARHRRGG Trigger: GCCGCCACGGCGGTGCCGGGCGTATCCACTGTCGCGGATTTTTCAGACTTGCAGGAAATTAAAAAGCAGCTGCTGCTCATCGCGGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CCA 90 bp | CAGACAGTGAGGCAGGGAGGAAAAAGGTACCCGGCGTGTCAGAGGTaGGTGTCTCCCCTTGGTTCCTCAGCTGTAGGATCTGGCGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTVRQGGKRYPACQR*VSPLGSSAVGSGGA Trigger: TGCTCCGCCAGATCCTACAGCTGAGGAACCAAGGGGAGACACCCACCTCTGACACGCCGGGTACCTTTTTCCTCCCTGCCTCACTGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS CCA 90 bp | GTGTCAGAGGTGGGTGTCTCCCCTTGGTTCCTCAGCTGTAGGATCTaGCGGAGCAAGGCCTTACCTTCTTCCCGGGTATCATTGAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSEVGVSPWFLSCRI*RSKALPSSRVSLNA Trigger: TGCATTCAATGATACCCGGGAAGAAGGTAAGGCCTTGCTCCGCCAGATCCTACAGCTGAGGAACCAAGGGGAGACACCCACCTCTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAGAAACTCTGTTGCAGGAAGCCAAACAGCAGCCAGCGGCACAACAGTCAACTCCGCAGACCATTaGCTGCTATGCAGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RARNSVAGSQTAASGTTVNSADH*LLCSRP Trigger: GGGCCTGCTGCATAGCAGCAAATGGTCTGCGGAGTT...GACTGTTGTGCCGCTGGCTGCTGTTTGGCTTCCTGCAACAGAGTTTCTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR CAA 90 bp | TTGTCGAGGTTGGGTGCTAAGTGCCCTCACCAGCTAAGCCAGCTCACCAGCCTCGTGACTGAAGACAGGTaGAGTGGAGAAACTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRLGAKCPHQLSQLTSLVTEDR*SGETLR Trigger: ACGCAGAGTTTCTCCACTCAACCTGTCTTCAGTCAC...GAGGCTGGTGAGCTGGCTTAGCTGGTGAGGGCACTTAGCACCCAACCTCGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTTGCTATGTCAAAACACCCACCTGCCTGTCTCCAAATGGGATTAAAGACAACTCCGCAGACCATTaGCTGCTATGCAGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSCYVKTPTCLSPNGIKDNSADH*LLCSRP Trigger: GGGCCTGCTGCATAGCAGCAAATGGTCTGCGGAGTT...GTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTGTTTTGACATAGCAACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGACAATGTACGAGCTCTaGGAAAAGCCCACATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VCLTLDNCALSFPLRSGMTMYEL*EKPTSM Trigger: CATTGATGTGGGCTTTTCCAAGAGCTCGTACATTGT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
||
| CDS-3UTR CAA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGTGTTTCCTCAGCTCATaGAAAATAGAAAGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVCLTLDNCALSFPLRSGCFLSS*KIERAL Trigger: CAAAGCCCTTTCTATTTTCAATGAGCTGAGGAAACA...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CAA 90 bp | GGCGTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGAATCCTGTAAGGATCTaGTTTCCTCAGCTCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVCLTLDNCALSFPLRSGNPVRI*FPQLIE Trigger: TTCAATGAGCTGAGGAAACAAGATCCTTACAGGATT...CCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS GCA 90 bp | GTCTCTCTTGTTGACCTCAATGGCATGTCGGTAAGCCTGAATAGCTaGAGACGTGTTCTTCATCTCCATGTACTCGTGCCCCATCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLVDLNGMSVSLNS*RRVLHLHVLVPHQC Trigger: ACACTGATGGGGCACGAGTACATGGAGATGAAGAACACGTCTGCAGCTATTCAGGCTTACCGACATGCCATTGAGGTCAACAAGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGAACTTCAGCATCTCTTaGTCTGTGATCAGGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: VCLTLDNCALSFPLRSGMNFSIS*SVIRLH Trigger: GTGTAACCTGATCACAGACAAAGAGATGCTGAAGTT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGATAGGCAACTGCAATTaGGGAAACAATGTACGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VCLTLDNCALSFPLRSGMIGNCN*GNNVRA Trigger: AGCTCGTACATTGTTTCCCAAATTGCAGTTGCCTAT...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTGACCCTGGACAACTGTGCTCTCTCCTTCCCTCTTAGGAGCGGGATGTCTTCCCGGGTATCATaGAATGCACAACATTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCLTLDNCALSFPLRSGMSSRVS*NAQHFW Trigger: CCAAAAATGTTGTGCATTCAATGATACCCGGGAAGA...CATCCCGCTCCTAAGAGGGAAGGAGAGAGCACAGTTGTCCAGGGTCAGACAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025228.12 |
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| CDS-3UTR CAA 90 bp | CTGCTAGCTGGCTGCAGAAGACCATCTTTCCCCCACCATATTTCTGCCTGCCTCTCTTCCCGGGTATCATaGAATGCACAACATTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLAGCRRPSFPHHISACLSSRVS*NAQHFW Trigger: CCAAAAATGTTGTGCATTCAATGATACCCGGGAAGA...GAGGCAGGCAGAAATATGGTGGGGGAAAGATGGTCTTCTGCAGCCAGCTAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS TCA 90 bp | AGGTTACACAGCTCTAACCAGGCTCCCCAGTGCAAAGGCAAAACATaGGTAGCCTCCACAAACACATCAATGGCCTCTTTCACTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHSSNQAPQCKGKT*VASTNTSMASFTKS Trigger: GGACTTAGTGAAAGAGGCCATTGATGTGTTTGTGGAGGCTACTCATGTTTTGCCTTTGCACTGGGGAGCCTGGTTAGAGCTGTGTAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 90 bp | TACTTCTGCAGGGCCTCCTCTATCAGCTGCAGTTCTGTGTATATGTaGGCCAAGAAGAACTCTTTCATCCAGGTGTCAGGCAAAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YFCRASSISCSSVYM*AKKNSFIQVSGKDR Trigger: CCTGTCTTTGCCTGACACCTGGATGAAAGAGTTCTTCTTGGCTCACATATACACAGAACTGCAGCTGATAGAGGAGGCCCTGCAGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS GCA 90 bp | GTACAGGAAATAGGCTTTCTTGCTATTGCAGCCGTGAAGGAAATGTaGCGCCCGGTCATACTCTTTAACATCAAAGTAGGCCTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQEIGFLAIAAVKEM*RPVILFNIKVGLGQ Trigger: CTGGCCAAGGCCTACTTTGATGTTAAAGAGTATGACCGGGCGGCACATTTCCTTCACGGCTGCAATAGCAAGAAAGCCTATTTCCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS-3UTR CAA 90 bp | GCATTCGCCTGTAATGCTATCATTAGGGAGGCTGAGGCAGAAAGGCCACAGGCTTGTTTCCTCAGCTCATaGAAAATAGAAAGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFACNAIIREAEAERPQACFLSS*KIERAL Trigger: CAAAGCCCTTTCTATTTTCAATGAGCTGAGGAAACA...AGCCTGTGGCCTTTCTGCCTCAGCCTCCCTAATGATAGCATTACAGGCGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS-3UTR CAA 90 bp | GCATTCGCCTGTAATGCTATCATTAGGGAGGCTGAGGCAGAAAGGCCACAGGCTAATCCTGTAAGGATCTaGTTTCCTCAGCTCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AFACNAIIREAEAERPQANPVRI*FPQLIE Trigger: TTCAATGAGCTGAGGAAACAAGATCCTTACAGGATT...AGCCTGTGGCCTTTCTGCCTCAGCCTCCCTAATGATAGCATTACAGGCGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS TCA 90 bp | ATAGATATCTTGGATGTATTTGATGTAACACTGGGCAGCCTGCTCTaGCTCAGTCAACTGTTCATGAAGCTTGGCCAGCTTCACAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IDILDVFDVTLGSLL*LSQLFMKLGQLHKS Trigger: GCTCTTGTGAAGCTGGCCAAGCTTCATGAACAGTTGACTGAGTCAGAGCAGGCTGCCCAGTGTTACATCAAATACATCCAAGATATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 90 bp | TTCTTCCCGGGTATCATTGAATGCACAACATTTTTGGGCACAAGTTaGAGCTTCATCCCACAGCTTGCACTTAAAATAGTACTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFPGIIECTTFLGTS*SFIPQLALKIVLGQ Trigger: CTGGCCCAGTACTATTTTAAGTGCAAGCTGTGGGATGAAGCTTCAACTTGTGCCCAAAAATGTTGTGCATTCAATGATACCCGGGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTTGCTATGTCAAAACACCCACCTGCCTGTCTCCAAATGGGATTAAAGACAACTTCAGCATCTCTTaGTCTGTGATCAGGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSCYVKTPTCLSPNGIKDNFSIS*SVIRLH Trigger: GTGTAACCTGATCACAGACAAAGAGATGCTGAAGTT...GTCTTTAATCCCATTTGGAGACAGGCAGGTGGGTGTTTTGACATAGCAACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS-3UTR CAA 90 bp | AACAGACGTGACTGCTCTTTACTGCAGGTAAGGTTTGATATTGGTCTAGCAATGATAGGCAACTGCAATTaGGGAAACAATGTACGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NRRDCSLLQVRFDIGLAMIGNCN*GNNVRA Trigger: AGCTCGTACATTGTTTCCCAAATTGCAGTTGCCTAT...CATTGCTAGACCAATATCAAACCTTACCTGCAGTAAAGAGCAGTCACGTCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
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| CDS GCA 72 bp | TCCTGCGCGTCCTCCTCTGTCAGAGGCGGCGGCGGCTaGAGCTCCGACAAAGGCAAGGCGGGCAGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCASSSVRGGGG*SSDKGKAGREK Trigger: CTTCTCTCTGCCCGCCTTGCCTTTGTCGGAGCTGCAGCCGCCGCCGCCTCTGACAGAGGAGGACGCGCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS GCA 72 bp | AGAGAGAAGGCCAACTCCGCAGACCATTTGCTGCTATaGAGCAGGCCCCGCTCCCGAGTGAGGCCCGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: REKANSADHLLL*SRPRSRVRPAM Trigger: CATCGCGGGCCTCACTCGGGAGCGGGGCCTGCTGCATAGCAGCAAATGGTCTGCGGAGTTGGCCTTCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CCA 72 bp | GTGGGTGTCTCCCCTTGGTTCCTCAGCTGTAGGATCTaGCGGAGCAAGGCCTTACCTTCTTCCCGGGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: VGVSPWFLSCRI*RSKALPSSRVS Trigger: TGATACCCGGGAAGAAGGTAAGGCCTTGCTCCGCCAGATCCTACAGCTGAGGAACCAAGGGGAGACACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CCA 72 bp | AGGCAGGGAGGAAAAAGGTACCCGGCGTGTCAGAGGTaGGTGTCTCCCCTTGGTTCCTCAGCTGTAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RQGGKRYPACQR*VSPLGSSAVGS Trigger: AGATCCTACAGCTGAGGAACCAAGGGGAGACACCCACCTCTGACACGCCGGGTACCTTTTTCCTCCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS GCA 72 bp | ATAGCTGCAGACGTGTTCTTCATCTCCATGTACTCGTaGCCCATCAGTGTCCAGGCCCCAAGGTACCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IAADVFFISMYS*PISVQAPRYLG Trigger: TCCTAGGTACCTTGGGGCCTGGACACTGATGGGGCACGAGTACATGGAGATGAAGAACACGTCTGCAGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CAA 90 bp | GTGACTGAAGACAGGTTGAGTGGAGAAACTCTGCGTGTAGGAGTGTaGTTTGCAGACAGTGAGGCAGGGAGGAAAAAGGTACCCGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VTEDRLSGETLRVGV*FADSEAGRKKVPGV Trigger: CACGCCGGGTACCTTTTTCCTCCCTGCCTCACTGTCTGCAAACAACACTCCTACACGCAGAGTTTCTCCACTCAACCTGTCTTCAGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133181.2 |
||
| CDS TCA 72 bp | GATGAGCAGCAGCTGCTTTTTAATTTCCTGCAAGTCTaGAAAATCCGCGACAGTGGATACGCCCGGCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: DEQQLLFNFLQV*KIRDSGYARHR Trigger: GCGGTGCCGGGCGTATCCACTGTCGCGGATTTTTCAGACTTGCAGGAAATTAAAAAGCAGCTGCTGCTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS TCA 72 bp | CAGGCAAAGACAGGAACTTCAGCATCTCTTTGTCTGTaGTCAGGTTACACAGCTCTAACCAGGCTCCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QAKTGTSASLCL*SGYTALTRLPS Trigger: ACTGGGGAGCCTGGTTAGAGCTGTGTAACCTGATCACAGACAAAGAGATGCTGAAGTTCCTGTCTTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS TCA 72 bp | AGGGCCTCCTCTATCAGCTGCAGTTCTGTGTATATGTaGGCCAAGAAGAACTCTTTCATCCAGGTGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RASSISCSSVYM*AKKNSFIQVSG Trigger: GCCTGACACCTGGATGAAAGAGTTCTTCTTGGCTCACATATACACAGAACTGCAGCTGATAGAGGAGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CCA 72 bp | GCCCCAAGGTACCTAGGATTCAACTTTAGGGCTCTCTaGAAATACAAAGCTGCTTTCTCATGCTGGGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: APRYLGFNFRAL*KYKAAFSCWER Trigger: ACGCTCCCAGCATGAGAAAGCAGCTTTGTATTTCCAGAGAGCCCTAAAGTTGAATCCTAGGTACCTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
||
| CDS CAA 72 bp | CAAGTGCTCCACGGTCTCCCCACAGGAATAGATATCTaGGATGTATTTGATGTAACACTGGGCAGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QVLHGLPTGIDI*DVFDVTLGSLL Trigger: GAGCAGGCTGCCCAGTGTTACATCAAATACATCCAAGATATCTATTCCTGTGGGGAGACCGTGGAGCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 72 bp | TTGGATGTATTTGATGTAACACTGGGCAGCCTGCTCTaGCTCAGTCAACTGTTCATGAAGCTTGGCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LDVFDVTLGSLL*LSQLFMKLGQL Trigger: AAGCTGGCCAAGCTTCATGAACAGTTGACTGAGTCAGAGCAGGCTGCCCAGTGTTACATCAAATACATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS GCA 72 bp | ATAGGCTTTCTTGCTATTGCAGCCGTGAAGGAAATGTaGCGCCCGGTCATACTCTTTAACATCAAAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: IGFLAIAAVKEM*RPVILFNIKVG Trigger: GCCTACTTTGATGTTAAAGAGTATGACCGGGCGGCACATTTCCTTCACGGCTGCAATAGCAAGAAAGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS GCA 72 bp | TGGAATACATGTACAGGAAATAGGCTTTCTTGCTATTaGAGCCGTGAAGGAAATGTGCCGCCCGGTCATACT | + |
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Preference number: 6 (lower is better) Translates to: WNTCTGNRLSCY*SREGNVPPGHT Trigger: AGTATGACCGGGCGGCACATTTCCTTCACGGCTGCAATAGCAAGAAAGCCTATTTCCTGTACATGTATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS CCA 72 bp | CCTTCTTCCCGGGTATCATTGAATGCACAACATTTTTaGGCACAAGTTGAAGCTTCATCCCACAGCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PSSRVSLNAQHF*AQVEASSHSLH Trigger: GTGCAAGCTGTGGGATGAAGCTTCAACTTGTGCCCAAAAATGTTGTGCATTCAATGATACCCGGGAAGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 72 bp | AAACAATGTACGAGCTCTTGGAAAAGCCCACATCAATaGGATGCTGATACTTCTGCAGGGCCTCCTCTATCA | + |
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Preference number: 6 (lower is better) Translates to: KQCTSSWKSPHQ*DADTSAGPPLS Trigger: TGATAGAGGAGGCCCTGCAGAAGTATCAGCATCTCATTGATGTGGGCTTTTCCAAGAGCTCGTACATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS CAA 90 bp | AAGGGCTTTGTCGATATCTCTGATATTGTGATAGGCAACTGCAATTaGGGAAACAATGTACGAGCTCTTGGAAAAGCCCACATCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: KGFVDISDIVIGNCN*GNNVRALGKAHINE Trigger: CTCATTGATGTGGGCTTTTCCAAGAGCTCGTACATTGTTTCCCAAATTGCAGTTGCCTATCACAATATCAGAGATATCGACAAAGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 72 bp | TATGCGCCAGGTAACTCAATTCAGACTTCATGCTCCTaGCATAGAGAAGGTTGGAGAATGTGTCCATATTTT | + |
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Preference number: 6 (lower is better) Translates to: YAPGNSIQTSCS*HREGWRMCPYF Trigger: AAAATATGGACACATTCTCCAACCTTCTCTATGTCAGGAGCATGAAGTCTGAATTGAGTTACCTGGCGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS TCA 72 bp | GGTATCATTGAATGCACAACATTTTTGGGCACAAGTTaGAGCTTCATCCCACAGCTTGCACTTAAAATAGTA | + |
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Preference number: 6 (lower is better) Translates to: GIIECTTFLGTS*SFIPQLALKIV Trigger: TACTATTTTAAGTGCAAGCTGTGGGATGAAGCTTCAACTTGTGCCCAAAAATGTTGTGCATTCAATGATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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| CDS CAA 72 bp | GGAGAATGTGTCCATATTTTCAATCCTGTAAGGATCTaGTTTCCTCAGCTCATTGAAAATAGAAAGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GECVHIFNPVRI*FPQLIENRKGF Trigger: AAAGCCCTTTCTATTTTCAATGAGCTGAGGAAACAAGATCCTTACAGGATTGAAAATATGGACACATTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025228.12 ENSMUST00000133181.2 |
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