Pregenerated sensors for CDC16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038416Ensembl transcript IDs: ENSMUST00000043962.9, ENSMUST00000130173.9, ENSMUST00000134645.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTACCTACTCTGGCACATaGGGGTGGGCCCTGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: FVGSENRKTSVAKACCPTTYSGT*GWALDL Trigger: GAGGTCCAGGGCCCACCCTCATGTGCCAGAGTAGGT...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAGTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGCATGAGGGTGGGCCCTaGACCTCTGTCAGGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SGVTSGTGKFLGRSKAAGHEGGP*TSVRFS Trigger: ACTGAACCTGACAGAGGTCCAGGGCCCACCCTCATG...CCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGACTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| 3UTR CCA 72 bp | GACGTAGCAAGGCTGCAGGGGAGCATTGACCTACTCTaGCACATGAGGGTGGGCCCTGGACCTCTGTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: DVARLQGSIDLL*HMRVGPGPLSG Trigger: ACCTGACAGAGGTCCAGGGCCCACCCTCATGTGCCAGAGTAGGTCAATGCTCCCCTGCAGCCTTGCTACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| 3UTR GCA 72 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTaGCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LLCRFRKSENIC*QGLLSHCYCRL Trigger: CAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | AAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTACTGCCGGACGCGTTTaGGCAGCGGCTCCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KHLLPRPAVPLLLQAAGPTAGRV*AAAPGS Trigger: TGAACCTGGAGCCGCTGCGCAAACGCGTCCGGCAGT...AGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTAAATGTAGAGATGCCGGAGCGCATGGGCTaGTCGGTGGTACTGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QGLLSHCYCRLLVLNVEMPERMG*SVVLRC Trigger: ACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGG...CATCTCTACATTTAGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | ATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTAAATCTCCTCATGAGAGAGTaGAGCTACCTTGTCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ICCQGLLSHCYCRLLVLNLLMRE*SYLVCP Trigger: TGGGCAGACAAGGTAGCTTCACTCTCTCATGAGGAG...ATTTAGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | GGAGTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGAGGCCATTGCTTGGTCGTaGTCACTCTCCACAGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GVTSGTGKFLGRSKAAGEAIAWS*SLSTAK Trigger: CTTCGCTGTGGAGAGTGAGCACGACCAAGCAATGGC...CTCCCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGCGATGCTCAGAGCTTaGCCAAAGAACCGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGVTSGTGKFLGRSKAAGAMLRA*PKNRSA Trigger: GGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGC...CCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGACTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | ATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTAAATTCAGCTGTGCTGCTGTaGAGTAAGCAGCCATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ICCQGLLSHCYCRLLVLNSAVLL*SKQPLL Trigger: AAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGA...ATTTAGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | AAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTTTCCATTCTCCATTCTaGAAGGCAACCACTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: KHLLPRPAVPLLLQAAGPFHSPF*KATTPT Trigger: GGTTGGAGTGGTTGCCTTTCAGAATGGAGAATGGAA...AGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | GTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGAGCATATGTGTCGTCTCGCCTaGGACCAAGAGCTGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VTSGTGKFLGRSKAAGEHMCRLA*DQELCG Trigger: TCCACACAGCTCTTGGTCTCAGGCGAGACGACACAT...ATGCTCCCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | AAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTCTACTTCAAAGTCCCTaGAATCCCATGGAGGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: KHLLPRPAVPLLLQAAGPLLQSP*NPMEAK Trigger: TTTCGCCTCCATGGGATTTCAGGGACTTTGAAGTAG...AGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGGCTGCTGGTCCTAAATGTAGAGATGTAGTCTGGAGTCACATCAGGAACCCACTGACTCGGGAATaGCCGTTTCACTGGGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LQAAGPKCRDVVWSHIRNPLTRE*PFHWAY Trigger: ATAAGCCCAGTGAAACGGTCATTCCCGAGTCAGTGG...GTTCCTGATGTGACTCCAGACTACATCTCTACATTTAGGACCAGCAGCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGCTCCAACCTCATGGATaGCAAATGGGTCTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SGVTSGTGKFLGRSKAAGLQPHG*QMGLLG Trigger: CCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAG...CCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGACTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTGCAGGCTGCTGGTCCTAAATGTAGAGATGTAGTCTGGAGTCACATCAGGAACAGGATGTCCAGAGCCTaGTGGTGCTCTTTTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LQAAGPKCRDVVWSHIRNRMSRA*WCSFAA Trigger: TGCTGCAAAAGAGCACCAGCAGGCTCTGGACATCCT...GTTCCTGATGTGACTCCAGACTACATCTCTACATTTAGGACCAGCAGCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | AAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCCAGCGTTTTCAAAGTTaGCCATCAGACTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: KTSVAKACCPTVTAGCWSQRFQS*PSDCGC Trigger: ACATCCACAGTCTGATGGGCAACTTTGAAAACGCTG...GGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | GTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGAGCATGACAAATGGGTCTTCTaGGGCGATGCTCAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VTSGTGKFLGRSKAAGEHDKWVF*GDAQSL Trigger: CAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTC...ATGCTCCCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | CAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTAAATGTAGAGATGACCACTCCAACCTCATaGATGACAAATGGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGLLSHCYCRLLVLNVEMTTPTS*MTNGSS Trigger: AGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGT...CATCTCTACATTTAGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCCCCTTCATCAGCTGTaGTGCTGTGAAGTAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSPLHQL*CCEVSS Trigger: GCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGG...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | GTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAAAACAGAGCACTTTaGTACTGTTGCTGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQKIGKHLLPRPAVPLLLQNRAL*YCCWSR Trigger: CCTGGACCAGCAACAGTATCAAAGTGCTCTGTTTTG...CAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCTGCTGGTGCTCTTTTaGAGCATAGTGGCATCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSLLVLF*SIVASS Trigger: GCTAGATGCCACTATGCTGCAAAAGAGCACCAGCAG...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGAAGTAAGCAGCCATTaGTTGGTCGTGCTCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVGSENRKTSVAKACCPTEVSSH*LVVLTL Trigger: GAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTC...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | ATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTAAATGGTAAACAGTTTGCATaGAAAGGATCTTTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: ICCQGLLSHCYCRLLVLNGKQFA*KGSFSI Trigger: GATGGAGAAAGATCCTTTCCATGCAAACTGTTTACC...ATTTAGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTCTTTATGGAAGACTGTaGCATCTCCCAGTCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: FVGSENRKTSVAKACCPTLYGRL*HLPVTG Trigger: TCCAGTGACTGGGAGATGTCACAGTCTTCCATAAAG...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCATAGTGGCATCTAGCTaGAAGGTATCGGCAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSIVASS*KVSASF Trigger: GAAGCTTGCCGATACCTTGCAGCTAGATGCCACTAT...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCTTCATCAGCTGTGCTaGTGTGAAGTAAGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSLHQLC*CEVSSH Trigger: ATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAG...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | GTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGAGCATGCTTCCTCTGTGTTCTaGTTTTCTACTTCAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VTSGTGKFLGRSKAAGEHASSVF*FSTSKS Trigger: GGACTTTGAAGTAGAAAAGCAGAACACAGAGGAAGC...ATGCTCCCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | GGAGTCACATCAGGAACTGGAAAATTCTTAGGACGTAGCAAGGCTGCAGGGGAGTACATTTCAATGCAGTaGCCAAGCATTGTAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: GVTSGTGKFLGRSKAAGEYISMQ*PSIVTE Trigger: TTCTGTTACAATGCTTGGTCACTGCATTGAAATGTA...CTCCCCTGCAGCCTTGCTACGTCCTAAGAATTTTCCAGTTCCTGATGTGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTTTTTATGACCAACCATaGGATAGTAACATCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: FVGSENRKTSVAKACCPTFYDQP*DSNIPP Trigger: CGGTGGGATGTTACTATCTCATGGTTGGTCATAAAA...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR TCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCCCATTTGTCAACTGTaGCCTCATTTCCAATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSPICQL*PHFQLL Trigger: AAGCAATTGGAAATGAGGTCACAGTTGACAAATGGG...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | AACTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTTTGCCCATCAGACTGTaGATGTACCCTATAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NYFVGSENRKTSVAKACCLPIRL*MYPIAE Trigger: CTCTGCTATAGGGTACATCCACAGTCTGATGGGCAA...ACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCGTCCCTGAAATCCCATaGAGGCGAAATGATGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSVPEIP*RRNDVF Trigger: AAAAACATCATTTCGCCTCCATGGGATTTCAGGGAC...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCAGTTTTCTGCAGACATaGCCCAAGTTGTTCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: LLCRFRKSENICCQGLLSSFLQT*PKLFNK Trigger: TTTGTTGAACAACTTGGGGCATGTCTGCAGAAAACT...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | AACTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTTGTGCTGTCAGCATGTaGTGTGATGTCAAAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NYFVGSENRKTSVAKACCCAVSM*CDVKRS Trigger: TGACCTTTTGACATCACACCACATGCTGACAGCACA...ACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTCCAGTTTCGAGTTATTaGTCAGACCATATTCTAATC | + |
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Preference number: 4 (lower is better) Translates to: FVGSENRKTSVAKACCPTPVSSY*SDHILI Trigger: GATTAGAATATGGTCTGACCAATAACTCGAAACTGG...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | ACCTTCTTTATTCTGCTACACGTAACTAACTACTTTGTAGGTTCAGAAAATCGGGTTAGGTCTGGACTCTaGAGCTTTAGTGGAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TFFILLHVTNYFVGSENRVRSGL*SFSGVL Trigger: CAAAACTCCACTAAAGCTCCAGAGTCCAGACCTAAC...CCGATTTTCTGAACCTACAAAGTAGTTAGTTACGTGTAGCAGAATAAAGAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CCA 90 bp | ACCTTCTTTATTCTGCTACACGTAACTAACTACTTTGTAGGTTCAGAAAATCGGAAATCGAGCTCTTTATaGAAGACTGTGACATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TFFILLHVTNYFVGSENRKSSSL*KTVTSP Trigger: GGGAGATGTCACAGTCTTCCATAAAGAGCTCGATTT...CCGATTTTCTGAACCTACAAAGTAGTTAGTTACGTGTAGCAGAATAAAGAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS TCA 90 bp | GCTTGCGTGACCGGAGCGCATGGGCTGCTCGGTGGTACTGCGCTGTaGGGTAAAGGCACTGAGCCAACCAATAAACATCCTGGGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ACVTGAHGLLGGTAL*GKGTEPTNKHPGAP Trigger: AGGAGCCCCAGGATGTTTATTGGTTGGCTCAGTGCCTTTACCTCACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS-3UTR CAA 90 bp | AAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTTACTGCCGGACGCGTTaGCGCAGCGGCTCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: KHLLPRPAVPLLLQAAGPYCRTR*RSGSRF Trigger: GAACCTGGAGCCGCTGCGCAAACGCGTCCGGCAGTA...AGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS TCA 90 bp | AGCTGCAAGGTATCGGCAAGCTTCATACAATTTGTCCAGCTTGCGTaGCCGGAGCGCATGGGCTGCTCGGTGGTACTGCGCTGTGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SCKVSASFIQFVQLA*PERMGCSVVLRCEV Trigger: TACCTCACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATACCTTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS GCA 90 bp | GTGACACCCCTTCATCAGCTGTGCTGCTGTGAAGTAAGCAGCCATTaGTTGGTCGTGCTCACTCTCCACAGCGAAGGAATGCCCGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: VTPLHQLCCCEVSSH*LVVLTLHSEGMPVG Trigger: GCCTACGGGCATTCCTTCGCTGTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGGTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS CCA 90 bp | CTGAAAGGCAACCACTCCAACCTCATGGATGACAAATGGGTCTTCTaGGGCGATGCTCAGAGCTTGGCCAAAGAACCGCTCAGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LKGNHSNLMDDKWVF*GDAQSLAKEPLSQF Trigger: AAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTTGCCTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS CCA 90 bp | ACCTCATGGATGACAAATGGGTCTTCTGGGGCGATGCTCAGAGCTTaGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATTGGTCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: TSWMTNGSSGAMLRA*PKNRSASFELLVRP Trigger: TGGTCTGACCAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS CCA 90 bp | TTCTCCATTCTGAAAGGCAACCACTCCAACCTCATGGATGACAAATaGGTCTTCTGGGGCGATGCTCAGAGCTTGGCCAAAGAACCGCTC | + |
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Preference number: 5 (lower is better) Translates to: FSILKGNHSNLMDDK*VFWGDAQSLAKEPL Trigger: GAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTTGCCTTTCAGAATGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS TCA 90 bp | TATATAGCATTGGCAAGTGACACCCCTTCATCAGCTGTGCTGCTGTaGAGTAAGCAGCCATTGCTTGGTCGTGCTCACTCTCCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: YIALASDTPSSAVLL*SKQPLLGRAHSPQR Trigger: TCGCTGTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGGTGTCACTTGCCAATGCTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGCTGCTGGTCCTAAATGTAGAGATGTAGTCTGGAGTCACATCAGGAACAGCACTTTGATACTGTaGCTGGTCCAGGTACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQAAGPKCRDVVWSHIRNSTLIL*LVQVLP Trigger: CGGCAGTACCTGGACCAGCAACAGTATCAAAGTGCT...GTTCCTGATGTGACTCCAGACTACATCTCTACATTTAGGACCAGCAGCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | AAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGCAGGCTGCTGGTCCTATCCAATATATAGCATaGGCAAGTGACACCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KHLLPRPAVPLLLQAAGPIQYIA*ASDTPS Trigger: TGAAGGGGTGTCACTTGCCAATGCTATATATTGGAT...AGGACCAGCAGCCTGCAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 90 bp | TTTTCCATTCTCCATTCTGAAAGGCAACCACTCCAACCTCATGGATaGCAAATGGGTCTTCTGGGGCGATGCTCAGAGCTTGGCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSILHSERQPLQPHG*QMGLLGRCSELGQR Trigger: TCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTTGCCTTTCAGAATGGAGAATGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 90 bp | GTCTCTTCCAAGTTAGGTCTGGACTCTGGAGCTTTAGTGGAGTTTTaGAGAGGTGCAAGTCCCGCTTCCTCTGTGTTCTGCTTTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VSSKLGLDSGALVEF*RGASPASSVFCFST Trigger: AGTAGAAAAGCAGAACACAGAGGAAGCGGGACTTGCACCTCTGCAAAACTCCACTAAAGCTCCAGAGTCCAGACCTAACTTGGAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 90 bp | TTAGTGGAGTTTTGCAGAGGTGCAAGTCCCGCTTCCTCTGTGTTCTaGTTTTCTACTTCAAAGTCCCTGAAATCCCATGGAGGCGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVEFCRGASPASSVF*FSTSKSLKSHGGEM Trigger: CATTTCGCCTCCATGGGATTTCAGGGACTTTGAAGTAGAAAAGCAGAACACAGAGGAAGCGGGACTTGCACCTCTGCAAAACTCCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 90 bp | CAAGTTAGGTCTGGACTCTGGAGCTTTAGTGGAGTTTTGCAGAGGTaGAAGTCCCGCTTCCTCTGTGTTCTGCTTTTCTACTTCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVRSGLWSFSGVLQR*KSRFLCVLLFYFKV Trigger: GACTTTGAAGTAGAAAAGCAGAACACAGAGGAAGCGGGACTTGCACCTCTGCAAAACTCCACTAAAGCTCCAGAGTCCAGACCTAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGAGAGTGAAGCTACCTaGTCTGCCCAAAACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVGSENRKTSVAKACCPTESEAT*SAQNRA Trigger: TGCTCTGTTTTGGGCAGACAAGGTAGCTTCACTCTC...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGCTGCTGGTCCTAAATGTAGAGATGTAGTCTGGAGTCACATCAGGAACAAATCGCAGCAACTCTaGTTCTTCAGCACAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQAAGPKCRDVVWSHIRNKSQQL*FFSTEL Trigger: AAGCTCTGTGCTGAAGAACAAGAGTTGCTGCGATTT...GTTCCTGATGTGACTCCAGACTACATCTCTACATTTAGGACCAGCAGCCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | AACTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTGTAAGCAGCCATTGCTaGGTCGTGCTCACTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NYFVGSENRKTSVAKACCVSSHC*VVLTLH Trigger: GTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTAC...ACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACCAGACATGCCCCAAGTaGTTCAACAAAGGTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RFRKSENICCQGLLSHCYQTCPK*FNKGSH Trigger: ATGGGAACCTTTGTTGAACAACTTGGGGCATGTCTG...GTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | GTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGTTACTGACAGCGTTTTCAAAGTaGCCCATCAGACTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VQKIGKHLLPRPAVPLLLTAFSK*PIRLWM Trigger: CATCCACAGTCTGATGGGCAACTTTGAAAACGCTGT...CAGTAACAGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CCA 90 bp | GACAAATCGAGCTCTTTATGGAAGACTGTGACATCTCCCAGTCACTaGAAGGGTCTCTCGAGCCATTGTCATCCTTCAGGTATTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DKSSSLWKTVTSPSH*KGLSSHCHPSGISQ Trigger: TTGAGAAATACCTGAAGGATGACAATGGCTCGAGAGACCCTTCCAGTGACTGGGAGATGTCACAGTCTTCCATAAAGAGCTCGATTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 ENSMUST00000134645.8 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCCAAAACAGAGCACTTaGATACTGTTGCTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCRFRKSENICCQGLLSPKQST*ILLLVQ Trigger: CTGGACCAGCAACAGTATCAAAGTGCTCTGTTTTGG...GGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTCTTTATTCTGCTACACGTAACTAACTACTTTGTAGGTTCAGAAAATCGGGGCGATGCTCAGAGCTaGGCCAAAGAACCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFFILLHVTNYFVGSENRGDAQS*AKEPLS Trigger: GCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCC...CCGATTTTCTGAACCTACAAAGTAGTTAGTTACGTGTAGCAGAATAAAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS TCA 90 bp | CTACCACGTCCAGATTCTCCTGCAAGCCGTCCACTGACTCGGGAATaGCCGTTTCACTGGGCTTATTATACTTCTTTAATTTGTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPRPDSPASRPLTRE*PFHWAYYTSLICSQ Trigger: TTGAGAACAAATTAAAGAAGTATAATAAGCCCAGTGAAACGGTCATTCCCGAGTCAGTGGACGGCTTGCAGGAGAATCTGGACGTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 |
||
| CDS CCA 90 bp | TGCTCAGAGCTTGGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATTaGTCAGACCATATTCTAATCCAATATATAGCATTGGCAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSELGQRTAQPVSSY*SDHILIQYIALASD Trigger: GTCACTTGCCAATGCTATATATTGGATTAGAATATGGTCTGACCAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTCCCACTGCCAGTTTCGAGTTATaGGTCAGACCATATTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVGSENRKTSVAKACCPTASFEL*VRPYSN Trigger: ATTAGAATATGGTCTGACCAATAACTCGAAACTGGC...AGTGGGACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS-3UTR CAA 90 bp | AACTACTTTGTAGGTTCAGAAAATCGGAAAACATCTGTTGCCAAGGCCTGCTGTGCACAGGTAAACAGTTaGCATGGAAAGGATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NYFVGSENRKTSVAKACCAQVNS*HGKDLS Trigger: AGAAAGATCCTTTCCATGCAAACTGTTTACCTGTGC...ACAGCAGGCCTTGGCAACAGATGTTTTCCGATTTTCTGAACCTACAAAGTAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 72 bp | GTATCGGCAAGCTTCATACAATTTGTCCAGCTTGCGTaGCCGGAGCGCATGGGCTGCTCGGTGGTACTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSASFIQFVQLA*PERMGCSVVLR Trigger: GCGCAGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 90 bp | CATCTAGCTGCAAGGTATCGGCAAGCTTCATACAATTTGTCCAGCTaGCGTGACCGGAGCGCATGGGCTGCTCGGTGGTACTGCGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLAARYRQASYNLSS*RDRSAWAARWYCAV Trigger: CACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATACCTTGCAGCTAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 72 bp | ACCGGAGCGCATGGGCTGCTCGGTGGTACTGCGCTGTaGGGTAAAGGCACTGAGCCAACCAATAAACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGAHGLLGGTAL*GKGTEPTNKHP Trigger: AGGATGTTTATTGGTTGGCTCAGTGCCTTTACCTCACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | GCAAGGTATCGGCAAGCTTCATACAATTTGTCCAGCTaGCGTGACCGGAGCGCATGGGCTGCTCGGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ARYRQASYNLSS*RDRSAWAARWY Trigger: GTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATACCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 72 bp | CAAGGTATCGGCAAGCTTCATACAATTTGTCCAGCTTaGGTGACCGGAGCGCATGGGCTGCTCGGTGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: QGIGKLHTICPA*VTGAHGLLGGT Trigger: AGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | CATCAGCTGTGCTGCTGTGAAGTAAGCAGCCATTGCTaGGTCGTGCTCACTCTCCACAGCGAAGGAATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HQLCCCEVSSHC*VVLTLHSEGMP Trigger: GGGCATTCCTTCGCTGTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 90 bp | ACACCCCTTCATCAGCTGTGCTGCTGTGAAGTAAGCAGCCATTGCTaGGTCGTGCTCACTCTCCACAGCGAAGGAATGCCCGTAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TPLHQLCCCEVSSHC*VVLTLHSEGMPVGY Trigger: ATAGCCTACGGGCATTCCTTCGCTGTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS CCA 72 bp | AACCACTCCAACCTCATGGATGACAAATGGGTCTTCTaGGGCGATGCTCAGAGCTTGGCCAAAGAACCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NHSNLMDDKWVF*GDAQSLAKEPL Trigger: GAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | CATCTAGCTGCAAGGTATCGGCAAGCTTCATACAATTaGTCCAGCTTGCGTGACCGGAGCGCATGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLAARYRQASYN*SSLRDRSAWAA Trigger: AGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAAGCTTGCCGATACCTTGCAGCTAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 72 bp | TTGGCAAGTGACACCCCTTCATCAGCTGTGCTGCTGTaGAGTAAGCAGCCATTGCTTGGTCGTGCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LASDTPSSAVLL*SKQPLLGRAHS Trigger: AGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGGTGTCACTTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS GCA 72 bp | CTCTCAGCTAAAGACACTACCACGTCCAGATTCTCCTaGAAGCCGTCCACTGACTCGGGAATGACCGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSAKDTTTSRFS*KPSTDSGMTVS Trigger: TGAAACGGTCATTCCCGAGTCAGTGGACGGCTTGCAGGAGAATCTGGACGTGGTAGTGTCTTTAGCTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 |
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| CDS GCA 72 bp | CTTCATCAGCTGTGCTGCTGTGAAGTAAGCAGCCATTaGTTGGTCGTGCTCACTCTCCACAGCGAAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LHQLCCCEVSSH*LVVLTLHSEGM Trigger: CATTCCTTCGCTGTGGAGAGTGAGCACGACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CCA 72 bp | CTGAAAGGCAACCACTCCAACCTCATGGATGACAAATaGGTCTTCTGGGGCGATGCTCAGAGCTTGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKGNHSNLMDDK*VFWGDAQSLAK Trigger: TTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTTGCCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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| CDS CAA 90 bp | AACCTCATGGATGACAAATGGGTCTTCTGGGGCGATGCTCAGAGCTaGGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATTGGTCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: NLMDDKWVFWGDAQS*AKEPLSQFRVIGQT Trigger: GGTCTGACCAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATCCATGAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 72 bp | CACTACCACGTCCAGATTCTCCTGCAAGCCGTCCACTaGCTCGGGAATGACCGTTTCACTGGGCTTATTATA | + |
|
Preference number: 6 (lower is better) Translates to: HYHVQILLQAVH*LGNDRFTGLII Trigger: TATAATAAGCCCAGTGAAACGGTCATTCCCGAGTCAGTGGACGGCTTGCAGGAGAATCTGGACGTGGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 |
||
| CDS CCA 72 bp | ATGACAAATGGGTCTTCTGGGGCGATGCTCAGAGCTTaGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: MTNGSSGAMLRA*PKNRSASFELL Trigger: CAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | GATGACAAATGGGTCTTCTGGGGCGATGCTCAGAGCTaGGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: DDKWVFWGDAQS*AKEPLSQFRVI Trigger: AATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCATCGCCCCAGAAGACCCATTTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CCA 72 bp | AGCTCTTTATGGAAGACTGTGACATCTCCCAGTCACTaGAAGGGTCTCTCGAGCCATTGTCATCCTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLWKTVTSPSH*KGLSSHCHPSG Trigger: ACCTGAAGGATGACAATGGCTCGAGAGACCCTTCCAGTGACTGGGAGATGTCACAGTCTTCCATAAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 ENSMUST00000134645.8 |
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| CDS CAA 90 bp | AGTCTCTTCCAAGTTAGGTCTGGACTCTGGAGCTTTAGTGGAGTTTaGCAGAGGTGCAAGTCCCGCTTCCTCTGTGTTCTGCTTTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SLFQVRSGLWSFSGV*QRCKSRFLCVLLFY Trigger: GTAGAAAAGCAGAACACAGAGGAAGCGGGACTTGCACCTCTGCAAAACTCCACTAAAGCTCCAGAGTCCAGACCTAACTTGGAAGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS TCA 72 bp | CAACCAATAAACATCCTGGGGCTCCTCATGAGAGAGTaGAGCTACCTTGTCTGCCCAAAACAGAGCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QPINILGLLMRE*SYLVCPKQSTL Trigger: CAAAGTGCTCTGTTTTGGGCAGACAAGGTAGCTTCACTCTCTCATGAGGAGCCCCAGGATGTTTATTGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 72 bp | CTGCTGGTGCTCTTTTGCAGCATAGTGGCATCTAGCTaGAAGGTATCGGCAAGCTTCATACAATTTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLVLFCSIVASS*KVSASFIQFVQ Trigger: CTGGACAAATTGTATGAAGCTTGCCGATACCTTGCAGCTAGATGCCACTATGCTGCAAAAGAGCACCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 90 bp | GAAGACTGTGACATCTCCCAGTCACTGGAAGGGTCTCTCGAGCCATaGTCATCCTTCAGGTATTTCTCAAAGAGCCTTCTGTTAATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EDCDISQSLEGSLEP*SSFRYFSKSLLLIG Trigger: GCCAATTAACAGAAGGCTCTTTGAGAAATACCTGAAGGATGACAATGGCTCGAGAGACCCTTCCAGTGACTGGGAGATGTCACAGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 ENSMUST00000134645.8 |
||
| CDS TCA 72 bp | CCAGATTCTCCTGCAAGCCGTCCACTGACTCGGGAATaGCCGTTTCACTGGGCTTATTATACTTCTTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: PDSPASRPLTRE*PFHWAYYTSLI Trigger: AATTAAAGAAGTATAATAAGCCCAGTGAAACGGTCATTCCCGAGTCAGTGGACGGCTTGCAGGAGAATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043962.9 ENSMUST00000130173.9 |
||
| CDS TCA 72 bp | GATATCTTCTGGCATGCTCATTTTTATGACCAACCATaGGATAGTAACATCCCACCGCAAACCAAGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: DIFWHAHFYDQP*DSNIPPQTKTQ Trigger: CTGTGTCTTGGTTTGCGGTGGGATGTTACTATCTCATGGTTGGTCATAAAAATGAGCATGCCAGAAGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | TATTGGTCAGACCATATTCTAATCCAATATATAGCATaGGCAAGTGACACCCCTTCATCAGCTGTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YWSDHILIQYIA*ASDTPSSAVLL Trigger: CAGCAGCACAGCTGATGAAGGGGTGTCACTTGCCAATGCTATATATTGGATTAGAATATGGTCTGACCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 72 bp | TCATTCGCTTTATTCAGCTCCACAAGAGTTCCTATGTaGACAGGTAAACAGTTTGCATGGAAAGGATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFALFSSTRVPM*TGKQFAWKGSF Trigger: GAAAGATCCTTTCCATGCAAACTGTTTACCTGTGCACATAGGAACTCTTGTGGAGCTGAATAAAGCGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | GCTTGGCCAAAGAACCGCTCAGCCAGTTTCGAGTTATaGGTCAGACCATATTCTAATCCAATATATAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: AWPKNRSASFEL*VRPYSNPIYSI Trigger: AATGCTATATATTGGATTAGAATATGGTCTGACCAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 72 bp | GCATATTTCTTAAGTTTTCTGCAGACATGCCCCAAGTaGTTCAACAAAGGTTCCCATTTGTCAACTGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: AYFLSFLQTCPK*FNKGSHLSTVT Trigger: GGTCACAGTTGACAAATGGGAACCTTTGTTGAACAACTTGGGGCATGTCTGCAGAAAACTTAAGAAATATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS CAA 90 bp | AAAGCCTCAGCATATTTCTTAAGTTTTCTGCAGACATGCCCCAAGTaGTTCAACAAAGGTTCCCATTTGTCAACTGTGACCTCATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KASAYFLSFLQTCPK*FNKGSHLSTVTSFP Trigger: TGGAAATGAGGTCACAGTTGACAAATGGGAACCTTTGTTGAACAACTTGGGGCATGTCTGCAGAAAACTTAAGAAATATGCTGAGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
||
| CDS GCA 72 bp | AAAGCCTCAGCATATTTCTTAAGTTTTCTGCAGACATaGCCCAAGTTGTTCAACAAAGGTTCCCATTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: KASAYFLSFLQT*PKLFNKGSHLS Trigger: TGACAAATGGGAACCTTTGTTGAACAACTTGGGGCATGTCTGCAGAAAACTTAAGAAATATGCTGAGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043962.9 |
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