Pregenerated sensors for CDADC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021982Ensembl transcript IDs: ENSMUST00000022555.11, ENSMUST00000056997.15, ENSMUST00000167100.9, ENSMUST00000171683.3, ENSMUST00000225839.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTaGGATACCGGACCCAGGCCCTTGGTTGATCTTAAGTGGCACGTG | + |
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Preference number: 1 (lower is better) Translates to: LDSILHSPAGMSSSS*DTGPRPLVDLKWHV Trigger: CACGTGCCACTTAAGATCAACCAAGGGCCTGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
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| 3UTR CCA 90 bp | TCCGTCCGTCCTTCCATCCGTTCATCCGTCCTTCCTTCCTTCCAGTaGGTTCTGGGGATTGAGCTCAGGTTGTCAGGCTTGGTGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SVRPSIRSSVLPSFQ*VLGIELRLSGLVAS Trigger: ACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAGGACGGATGAACGGATGGAAGGACGGACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CCA 90 bp | CACTCACCAATGCCCACCCCAGCATGGGTGATGGCTAATGAAAGCTaGAAGCCTGGAGTACACTGTACAACCTCGGGTAGCTCGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: HSPMPTPAWVMANES*KPGVHCTTSGSSTG Trigger: CCCTGTCGAGCTACCCGAGGTTGTACAGTGTACTCCAGGCTTCCAGCTTTCATTAGCCATCACCCATGCTGGGGTGGGCATTGGTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR CCA 90 bp | CTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGTTGTCAGGCTTaGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPSSGFWGLSSGCQA*WQVPLSSHSPPVPG Trigger: CCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CCA 90 bp | CTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGCTACTGCTaGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LVKQFAQLSACGRYC*YQESLDKSFPCLCV Trigger: GACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CCA 90 bp | CCCATCAAAAGAAGATCGCCTCCTGTGAATGATCCCTTCTCAAACTaGCTGCATCACCTCTGGATAAATACCAGTAGGTACTGTTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: PIKRRSPPVNDPFSN*LHHLWINTSRYCSY Trigger: GTAAGAACAGTACCTACTGGTATTTATCCAGAGGTGATGCAGCCAGTTTGAGAAGGGATCATTCACAGGAGGCGATCTTCTTTTGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR CCA 90 bp | CAGCAAGTCCTGGCTGGTAGAAGGACTGAGTGTAATGCAGCCTTTTaGTTATTTATACACGGAGTCTTAAAAGATGGCCAGGTCATCGTA | + |
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Preference number: 1 (lower is better) Translates to: QQVLAGRRTECNAAF*LFIHGVLKDGQVIV Trigger: TACGATGACCTGGCCATCTTTTAAGACTCCGTGTATAAATAACCAAAAGGCTGCATTACACTCAGTCCTTCTACCAGCCAGGACTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR TCA 90 bp | CAATCCAAAATAACTACCCATCAAAAGAAGATCGCCTCCTGTGAATaGTCCCTTCTCAAACTGGCTGCATCACCTCTGGATAAATACCAG | + |
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Preference number: 1 (lower is better) Translates to: QSKITTHQKKIASCE*SLLKLAASPLDKYQ Trigger: CTGGTATTTATCCAGAGGTGATGCAGCCAGTTTGAGAAGGGATCATTCACAGGAGGCGATCTTCTTTTGATGGGTAGTTATTTTGGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR CAA 90 bp | CCTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGTTGTCAGGCTaGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSFQWVLGIELRLSG*VASAFIQSLTSSTR Trigger: CCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAAACCCCTGGTCCATTCCACCTCCCCTGTCACCAGCCCTGAGTCACCCAGCATGTGGTCGCTACTaGTGGTACCAAGAATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TANPWSIPPPLSPALSHPACGRY*WYQESL Trigger: AAGAGATTCTTGGTACCAGCAGTAGCGACCACATGC...TGGGTGACTCAGGGCTGGTGACAGGGGAGGTGGAATGGACCAGGGGTTTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAAACCCCTGGTCCATTCCACCTCCCCTGTCACCAGCCCTGAGTCACCCACCAGGTTCGACCAGGTaGATTGTCTTTTCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TANPWSIPPPLSPALSHPPGSTR*IVFSSC Trigger: ACAAGAGGAAAAGACAATGCACCTGGTCGAACCTGG...TGGGTGACTCAGGGCTGGTGACAGGGGAGGTGGAATGGACCAGGGGTTTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | TTGAGGCTGGAGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGTTaGCATGACAGAGCTCTGCACAGACGTGTTGGAGGGAACTCATAC | + |
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Preference number: 2 (lower is better) Translates to: LRLEDPNKGLHSEGS*HDRALHRRVGGNSY Trigger: GTATGAGTTCCCTCCAACACGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAGAACTTCAGGCAGTCCCCATGACACAGCCTCAAATACCAGCAGTGGCAAAGAGAAATCAGCATTaGGGCTGGAGGACCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: APELQAVPMTQPQIPAVAKRNQH*GWRTPT Trigger: TGTTGGGGTCCTCCAGCCTCAATGCTGATTTCTCTT...TGCCACTGCTGGTATTTGAGGCTGTGTCATGGGGACTGCCTGAAGTTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCATTCGCTCAACTCAGTaGATGTGGTCGCTACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TPLLIKLGTHHRGPALGCIRSTQ*MWSLLL Trigger: CAGCAGTAGCGACCACATGCACTGAGTTGAGCGAAT...GCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTTCAGGTTGTCAGGCTTaGTGGCAAGTGCCTTTATCC | + |
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Preference number: 2 (lower is better) Translates to: LHYLSSWALTIGAQHLGASGCQA*WQVPLS Trigger: GGATAAAGGCACTTGCCACCAAGCCTGACAACCTGA...AGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAAACCCCCTTCCTTCCTTCCAGTaGGTTCTGGGGATTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ALNKGSAGPWKNQKTANPLPSFQ*VLGIEL Trigger: GAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAG...GGGGTTTGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | CTCAACTCAGTGCATGTGGTCGCTACTGCTGGTACCAAGAATCTCTaGATAAATCCTTCCCCTGCCTCTGTGTCCGTCCGTCCTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: LNSVHVVATAGTKNL*INPSPASVSVRPSI Trigger: GATGGAAGGACGGACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATGGTGGATCTGCTGGGCCATaGAAAAACCAGAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: VPGVMGQKRATMQCPLYGGSAGP*KNQKTA Trigger: TGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCC...ACCATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATGCATGTGGTCGCTACTaGTGGTACCAAGAATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RVPGVMGQKRATMQCPLYACGRY*WYQESL Trigger: AAGAGATTCTTGGTACCAGCAGTAGCGACCACATGC...ATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTTGTGGTCGCTACTGCTaGTACCAAGAATCTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LHYLSSWALTIGAQHLGACGRYC*YQESLD Trigger: ATCAAGAGATTCTTGGTACCAGCAGTAGCGACCACA...AGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | TCCATTCAGAGGGCAGTTTGCATGACAGAGCTCTGCACAGACGTGTaGGAGGGAACTCATACTGGCCTCCTTCGAAAATCAAGACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SIQRAVCMTELCTDV*EGTHTGLLRKSRLL Trigger: AAGCAGTCTTGATTTTCGAAGGAGGCCAGTATGAGTTCCCTCCAACACGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCTCTGAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATTGCTTATAGGAGCAGAAGTGACTCAAAGACATCTGCCTCACTCACCAAGAGGGCAGTTTGCATaGCAGAGCTCTGCACAGACG | + |
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Preference number: 2 (lower is better) Translates to: EALLIGAEVTQRHLPHSPRGQFA*QSSAQT Trigger: CGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCTCT...TGGTGAGTGAGGCAGATGTCTTTGAGTCACTTCTGCTCCTATAAGCAATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGTAGCTCGACAGGGTGGAGAAAATGCCTTGTAGGTAGCTCTAAGTCTCTTATTCAGAGGGCAGTTTaGATGACAGAGCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: SGSSTGWRKCLVGSSKSLIQRAV*MTELCT Trigger: TGTGCAGAGCTCTGTCATGCAAACTGCCCTCTGAAT...AAGAGACTTAGAGCTACCTACAAGGCATTTTCTCCACCCTGTCGAGCTACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTCGGGTAGCTCGACAGGGTGGAGAAAATGCCTTGTAGGTAGCTCTAAGTCTATTCACAGTCGGTCTTaGATTTGCTGCAGCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: TSGSSTGWRKCLVGSSKSIHSRS*ICCSCI Trigger: GATACAGCTGCAGCAAATGCAAGACCGACTGTGAAT...AGACTTAGAGCTACCTACAAGGCATTTTCTCCACCCTGTCGAGCTACCCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTGGTTGTCAGGCTTGGTaGCAAGTGCCTTTATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: YCWYQESLDKSFPCLCVRGCQAW*QVPLSS Trigger: ACTGGATAAAGGCACTTGCCACCAAGCCTGACAACC...ACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | TCCAGGTTGGTTTCCTTGTGTTATAAAAGCAAAGAGAAATCAGCATaGAGGCTGGAGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRLVSLCYKSKEKSA*RLEDPNKGLHSEGS Trigger: ACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATTGCTTATAGGAGCAGAAGTGACTCAAAGACATCTGCCTCACTCACCATCTGGGCAGCTCAGCTaGTCACTGCTTCTTTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: EALLIGAEVTQRHLPHSPSGQLS*SLLLLV Trigger: CACTAAAAGAAGCAGTGATCAGCTGAGCTGCCCAGA...TGGTGAGTGAGGCAGATGTCTTTGAGTCACTTCTGCTCCTATAAGCAATGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGTAAATGTCATGATACCTGCAGCAGATAGAGTTCCAGGAGTGATGGGGCTTCCTTCCTTCCAGTaGGTTCTGGGGATTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ISVNVMIPAADRVPGVMGLPSFQ*VLGIEL Trigger: GAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAG...CCCCATCACTCCTGGAACTCTATCTGCTGCAGGTATCATGACATTTACTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | CCAGCAGTGGCAAGCACTAAAACACTACGGTCCAGGTTGGTTTCCTaGTGTTATAAAAGCAAAGAGAAATCAGCATTGAGGCTGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PAVASTKTLRSRLVS*CYKSKEKSALRLED Trigger: GTCCTCCAGCCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGCTTGCCACTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTAAAACACTACGGTCCAGGTTGGTTTCCTTGTGTTATAAAAGCAAAGAGAGCTCAACAAGGGATCTaGTGGGCCATGGAAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: ALKHYGPGWFPCVIKAKRAQQGI*WAMEKP Trigger: TGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGC...TCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR CAA 90 bp | CCTCAAATACCAGCAGTGGCAAGCACTAAAACACTACGGTCCAGGTaGGTTTCCTTGTGTTATAAAAGCAAAGAGAAATCAGCATTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PQIPAVASTKTLRSR*VSLCYKSKEKSALR Trigger: CCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGCTTGCCACTGCTGGTATTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGATGGCCAGGTCATCGTATTCCCTGGAGCAGTTTATTAATTGTCATCCTTGATCCCTTCTCAAACTaGCTGCATCACCTCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: KRWPGHRIPWSSLLIVILDPFSN*LHHLWI Trigger: TATCCAGAGGTGATGCAGCCAGTTTGAGAAGGGATC...AAGGATGACAATTAATAAACTGCTCCAGGGAATACGATGACCTGGCCATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR-3UTR CCA 90 bp | TTAATTGTCATCCTTGCAATCCAAAATAACTACCCATCAAAAGAAGATCGCCTCGGTAACACCACTCTGTaGCTAGTTACAGTTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LIVILAIQNNYPSKEDRLGNTTL*LVTVQP Trigger: AGGCTGAACTGTAACTAGCCACAGAGTGGTGTTACC...GAGGCGATCTTCTTTTGATGGGTAGTTATTTTGGATTGCAAGGATGACAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR-3UTR CCA 90 bp | AAAAGATGGCCAGGTCATCGTATTCCCTGGAGCAGTTTATTAATTGTCATCCTTGTACTGTTCTTACACTaGTCTCAAACTATTGCTACT | + |
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Preference number: 2 (lower is better) Translates to: KRWPGHRIPWSSLLIVILVLFLH*SQTIAT Trigger: AGTAGCAATAGTTTGAGACCAGTGTAAGAACAGTAC...AAGGATGACAATTAATAAACTGCTCCAGGGAATACGATGACCTGGCCATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR CAA 90 bp | TGGATAAATACCAGTAGGTACTGTTCTTACACTGGTCTCAAACTATaGCTACTCCATTTAGTATATTGGAAGATCATATACTGTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: WINTSRYCSYTGLKL*LLHLVYWKIIYCML Trigger: CAGCATACAGTATATGATCTTCCAATATACTAAATGGAGTAGCAATAGTTTGAGACCAGTGTAAGAACAGTACCTACTGGTATTTATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| 3UTR CCA 72 bp | TTCACAGTCGGTCTTGCATTTGCTGCAGCTGTATCCTaGGATGGGCGTGGGATCAGCCCCAGAACTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: FTVGLAFAAAVS*DGRGISPRTSG Trigger: GCCTGAAGTTCTGGGGCTGATCCCACGCCCATCCCAGGATACAGCTGCAGCAAATGCAAGACCGACTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTTGAGTGGGTTCTGGGGATaGAGCTCAGGTTGTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PLLIKLGTHHRGPALGCLSGFWG*SSGCQA Trigger: AGCCTGACAACCTGAGCTCAATCCCCAGAACCCACT...CAAGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR GCA 72 bp | AGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGTTTaGATGACAGAGCTCTGCACAGACGTGTTGGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RTPTKGSIQRAV*MTELCTDVLEG Trigger: TCCCTCCAACACGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR CCA 72 bp | ATGCCCACCCCAGCATGGGTGATGGCTAATGAAAGCTaGAAGCCTGGAGTACACTGTACAACCTCGGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: MPTPAWVMANES*KPGVHCTTSGS Trigger: GCTACCCGAGGTTGTACAGTGTACTCCAGGCTTCCAGCTTTCATTAGCCATCACCCATGCTGGGGTGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR TCA 72 bp | ATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTaGGATACCGGACCCAGGCCCTTGGTTGATCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: ILHSPAGMSSSS*DTGPRPLVDLK Trigger: CTTAAGATCAACCAAGGGCCTGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
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| 3UTR TCA 72 bp | ATCTGCCTCACTCACCAATGCCCACCCCAGCATGGGTaGTGGCTAATGAAAGCTGGAAGCCTGGAGTACACT | + |
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Preference number: 3 (lower is better) Translates to: ICLTHQCPPQHG*WLMKAGSLEYT Trigger: AGTGTACTCCAGGCTTCCAGCTTTCATTAGCCATCACCCATGCTGGGGTGGGCATTGGTGAGTGAGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR CCA 72 bp | AGACATCTGCCTCACTCACCAATGCCCACCCCAGCATaGGTGATGGCTAATGAAAGCTGGAAGCCTGGAGTA | + |
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Preference number: 3 (lower is better) Translates to: RHLPHSPMPTPA*VMANESWKPGV Trigger: TACTCCAGGCTTCCAGCTTTCATTAGCCATCACCCATGCTGGGGTGGGCATTGGTGAGTGAGGCAGATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATCTCAGGTTGTCAGGCTaGGTGGCAAGTGCCTTTATC | + |
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Preference number: 3 (lower is better) Translates to: RVPGVMGQKRATMQCPLYLRLSG*VASAFI Trigger: GATAAAGGCACTTGCCACCAAGCCTGACAACCTGAG...ATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCAGAAGTGACTCAAAGACATCTGCCTCACTCACCAATGCCCACCCCAGCAAAAGAGAAATCAGCATaGAGGCTGGAGGACCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: GAEVTQRHLPHSPMPTPAKEKSA*RLEDPN Trigger: GTTGGGGTCCTCCAGCCTCAATGCTGATTTCTCTTT...TGCTGGGGTGGGCATTGGTGAGTGAGGCAGATGTCTTTGAGTCACTTCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR GCA 72 bp | GTAACACGTGCTGATATTCACAGTCGGTCTTGCATTTaGTGCAGCTGTATCCTGGGATGGGCGTGGGATCAG | + |
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Preference number: 3 (lower is better) Translates to: VTRADIHSRSCI*CSCILGWAWDQ Trigger: CTGATCCCACGCCCATCCCAGGATACAGCTGCAGCAAATGCAAGACCGACTGTGAATATCAGCACGTGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| 3UTR GCA 72 bp | CACATGGTAACACGTGCTGATATTCACAGTCGGTCTTaGATTTGCTGCAGCTGTATCCTGGGATGGGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HMVTRADIHSRS*ICCSCILGWAW Trigger: CCACGCCCATCCCAGGATACAGCTGCAGCAAATGCAAGACCGACTGTGAATATCAGCACGTGTTACCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGGCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAGGTACCAAGAATCTCTaGATAAATCCTTCCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQALNKGSAGPWKNQKTAGTKNL*INPSPA Trigger: GGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACC...TGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGCCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR GCA 72 bp | AAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTaGTTGAATTTCAGTAAATGTCATGATACCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KLGTHHRGPALG*LNFSKCHDTCS Trigger: GCTGCAGGTATCATGACATTTACTGAAATTCAAGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR TCA 72 bp | TGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTTaGATTTCAGTAAATGTCATGATACCTGCAGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WALTIGAQHLGA*ISVNVMIPAAD Trigger: ATCTGCTGCAGGTATCATGACATTTACTGAAATTCAAGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR GCA 72 bp | TGTACAACCTCGGGTAGCTCGACAGGGTGGAGAAAATaGCTTGTAGGTAGCTCTAAGTCTCTTCCAAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CTTSGSSTGWRK*LVGSSKSLPSI Trigger: GATGCTTGGAAGAGACTTAGAGCTACCTACAAGGCATTTTCTCCACCCTGTCGAGCTACCCGAGGTTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCGACCAGGTGCATTGTCTTTTCCTCTTGTAAAACAATTCGCTCAACTCAGAGTGGGTTCTGGGGATaGAGCTCAGGTTGTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSTRCIVFSSCKTIRSTQSGFWG*SSGCQA Trigger: AGCCTGACAACCTGAGCTCAATCCCCAGAACCCACT...CTGAGTTGAGCGAATTGTTTTACAAGAGGAAAAGACAATGCACCTGGTCGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAAACCCCGTTCGACCAGGTGCATaGTCTTTTCCTCTTGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALNKGSAGPWKNQKTANPVRPGA*SFPLVK Trigger: TTTTACAAGAGGAAAAGACAATGCACCTGGTCGAAC...GGGGTTTGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR TCA 72 bp | TCAGGGCCTTGCACATGCTTGCACACACTACTCCACTaGACTAAATCTGCAGGCCACTTACACAACTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: SGPCTCLHTLLH*TKSAGHLHNSC Trigger: ACATGAGTTGTGTAAGTGGCCTGCAGATTTAGTTCAGTGGAGTAGTGTGTGCAAGCATGTGCAAGGCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| 3UTR CCA 72 bp | AGAAGATCGCCTCCTGTGAATGATCCCTTCTCAAACTaGCTGCATCACCTCTGGATAAATACCAGTAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RRSPPVNDPFSN*LHHLWINTSRY Trigger: GTACCTACTGGTATTTATCCAGAGGTGATGCAGCCAGTTTGAGAAGGGATCATTCACAGGAGGCGATCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| 3UTR TCA 72 bp | CAAAATAACTACCCATCAAAAGAAGATCGCCTCCTGTaGATGATCCCTTCTCAAACTGGCTGCATCACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QNNYPSKEDRLL*MIPSQTGCITS Trigger: AGAGGTGATGCAGCCAGTTTGAGAAGGGATCATTCACAGGAGGCGATCTTCTTTTGATGGGTAGTTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| 3UTR TCA 72 bp | TTTCCTTGTGTTATAAAAGCAAAGAGAAATCAGCATTaGGGCTGGAGGACCCCAACAAAGGGCTCCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPCVIKAKRNQH*GWRTPTKGSIQ Trigger: CTGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR GCA 72 bp | GTCTTTTCCTCTTGTAAAACAATTCGCTCAACTCAGTaGATGTGGTCGCTACTGCTGGTACCAAGAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFSSCKTIRSTQ*MWSLLLVPRIS Trigger: AGAGATTCTTGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAGAGGAAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR CCA 72 bp | CAGCAGTGGCAAGCACTAAAACACTACGGTCCAGGTTaGTTTCCTTGTGTTATAAAAGCAAAGAGAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQWQALKHYGPG*FPCVIKAKRNQ Trigger: CTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGCTTGCCACTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAAATCATTATCCTCAAATGTTAAGGAATTCTAGAAGAGCTCTAGAGCCGACACTACGGTCCAGGTaGGTTTCCTTGTGTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: DGNHYPQMLRNSRRALEPTLRSR*VSLCYK Trigger: TTTATAACACAAGGAAACCAACCTGGACCGTAGTGT...CGGCTCTAGAGCTCTTCTAGAATTCCTTAACATTTGAGGATAATGATTTCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR GCA 72 bp | CCTCCTTCGAAAATCAAGACTGCTTTCAGTTCAGTCTaGAATAAGCAAATCACACTTTCCCAACTCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PPSKIKTAFSSV*NKQITLSQLHL Trigger: TAAATGGAGTTGGGAAAGTGTGATTTGCTTATTGCAGACTGAACTGAAAGCAGTCTTGATTTTCGAAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTGTCATGCTGCCCGTCTaGGTGCCGACTGACCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSLSSTPFSIHPQACVMLPV*VPTDLS Trigger: CGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGAC...ACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| 3UTR CAA 72 bp | TGGCTGAGACACTGCCTGACACCCCCGCCGCCTTCCTaGTCCTCGACTCCATTCTCCATTCACCCGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLRHCLTPPPPS*SSTPFSIHPQA Trigger: TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGTCAGGCAGTGTCTCAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR TCA 90 bp | CCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTTCGCTTCTGCCCAAATaGCAGCTCCAACTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSLSSTPFSIHPQACSLLPK*QLQLLF Trigger: AAACAGGAGTTGGAGCTGTCATTTGGGCAGAAGCGA...ACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCCTAAGGTCATGCTGCCCGTCTaGGTGCCGACTGACCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVASAFIQSLTSSTREPKVMLPV*VPTDLS Trigger: CGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGAC...CTTAGGCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | CCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCGATATGCCAATAACCTaGCCTGCACCATGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLPCPRLHSPFTRRHVDMPIT*PAPCNA Trigger: GGCATTGCATGGTGCAGGCCAGGTTATTGGCATATC...GACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| 3UTR CAA 72 bp | GCTAGGCTTAACAAACTGTCACCAAGAAGCGCACACTaGACTGGGTGGCTGAGACACTGCCTGACACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARLNKLSPRSAH*TGWLRHCLTPP Trigger: CGGGGGTGTCAGGCAGTGTCTCAGCCACCCAGTCAAGTGTGCGCTTCTTGGTGACAGTTTGTTAAGCCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| 3UTR CAA 72 bp | GAGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGTTaGCATGACAGAGCTCTGCACAGACGTGTTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDPNKGLHSEGS*HDRALHRRVGG Trigger: CCCTCCAACACGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACATGGGCCCGGCTGTTTaGCTTCAATCTTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPFSIHPQACLPPPEIPDMGPAV*LQSFCG Trigger: GCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCAT...GTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR TCA 90 bp | AGCATTGAGGCTGGAGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGTTTGCAATGGGCCCGGCTGTTTaGCTTCAATCTTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIEAGGPQQRAPFRGQFAMGPAV*LQSFCG Trigger: GCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCAT...TGCAAACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATTCAGCCTGGACCCATaGTTAATGAGAGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPPPPSLSSTPFSIHPQAFSLDP*LMRAIC Trigger: GCAAATTGCTCTCATTAAGCATGGGTCCAGGCTGAA...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | CCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRLPCPRLHSPFTRRHVISLSL*LSSMCG Trigger: CCCGCACATGGATGACAAGCATAAGGACAGAGAAAT...GACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCATGCTTGTCATCCATGTaGGGGAAGTCGGCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIHPQACLPPPEIPDPCLSSM*GKSAYS Trigger: TGAGTATGCCGACTTCCCGCACATGGATGACAAGCA...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATCAGACGGATTCAACTaGCATGTGAATTTGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPPPPSLSSTPFSIHPQASDGFN*HVNLRT Trigger: TGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGA...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | GGGATGGGCGTGGGATCAGCCCCAGAACTTCAGGCAGTCCCCATGACACAGCCTCACTTTAGAAAGCCTTaGTATTTGACCCGTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMGVGSAPELQAVPMTQPHFRKP*YLTRHA Trigger: AGCATGACGGGTCAAATACCAAGGCTTTCTAAAGTG...AGGCTGTGTCATGGGGACTGCCTGAAGTTCTGGGGCTGATCCCACGCCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCAAGTAAGACACACACATaGGCCCGGCTGTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIHPQACLPPPEIPDPSKTHT*ARLFDF Trigger: GAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACT...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| 3UTR CAA 72 bp | CCTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGTaGTCAGGCTTGGTGGCAAGTGCCTTTATCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFQWVLGIELR*SGLVASAFIQS Trigger: TGACTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCCTAAGAAAAACAAGCGGTTGTaGCTGATCCTGCAGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVASAFIQSLTSSTREPKKNKRL*LILQSG Trigger: CCCGCTCTGCAGGATCAGCCACAACCGCTTGTTTTT...CTTAGGCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLVLDSILHSPAGMSSSSSSVF*DFCPWA Trigger: AGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGA...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCTTCACTGGAGCAGTaGAGACCAATGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVLDSILHSPAGMSSSSSLEQ*RPMIFM Trigger: CATGAAGATCATTGGTCTTCACTGCTCCAGTGAAGA...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGAACTTCAGGCAGTCCCCATGACACAGCCTCAAATACCAGCAGTGGCATCTTCACTGGAGCAGTaGAGACCAATGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: APELQAVPMTQPQIPAVASSLEQ*RPMIFM Trigger: CATGAAGATCATTGGTCTTCACTGCTCCAGTGAAGA...TGCCACTGCTGGTATTTGAGGCTGTGTCATGGGGACTGCCTGAAGTTCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCCTAAGTCGCTTCTGCCCAAATaGCAGCTCCAACTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVASAFIQSLTSSTREPKSLLPK*QLQLLF Trigger: AAACAGGAGTTGGAGCTGTCATTTGGGCAGAAGCGA...CTTAGGCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTAAATGTCATGATACCTGCAGCAGATAGAGTTCCAGGAGTGATGGGGGTCATGCTGCCCGTCTaGGTGCCGACTGACCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISVNVMIPAADRVPGVMGVMLPV*VPTDLS Trigger: CGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGAC...CCCCATCACTCCTGGAACTCTATCTGCTGCAGGTATCATGACATTTACTGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAAGTAAGACACACACATaGGCCCGGCTGTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQALNKGSAGPWKNQKTASKTHT*ARLFDF Trigger: GAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACT...TGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGCCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAAACCCCAGTAAGACACACACATaGGCCCGGCTGTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNKGSAGPWKNQKTANPSKTHT*ARLFDF Trigger: GAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACT...GGGGTTTGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATGATATGCCAATAACCTaGCCTGCACCATGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVPGVMGQKRATMQCPLYDMPIT*PAPCNA Trigger: GGCATTGCATGGTGCAGGCCAGGTTATTGGCATATC...ATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCACATGCTGCGTTCTTCTaGTTTTATATCTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPPPPSLSSTPFSIHPQAHAAFF*FYILTS Trigger: AGATGTCAAGATATAAAACCAGAAGAACGCAGCATG...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTCTTCACTGGAGCAGTaGAGACCAATGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TPLLIKLGTHHRGPALGCSSLEQ*RPMIFM Trigger: CATGAAGATCATTGGTCTTCACTGCTCCAGTGAAGA...GCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCCTAAGAGCCATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVPLSSHSPPVPGSLRAISLSL*LSSMCG Trigger: CCCGCACATGGATGACAAGCATAAGGACAGAGAAAT...GGCTCTTAGGCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCCACTTTAGAAAGCCTTaGTATTTGACCCGTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLVLDSILHSPAGMSSSHFRKP*YLTRHA Trigger: AGCATGACGGGTCAAATACCAAGGCTTTCTAAAGTG...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCGAGCAAACTTATTTCTaGGTCAGAAGGCCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLVLDSILHSPAGMSSSEQTYF*VRRPVR Trigger: TCTTACTGGCCTTCTGACCCAGAAATAAGTTTGCTC...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCAATCTTTCTGCGGCTTTaGCATCTAGCTTTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIHPQACLPPPEIPDPIFLRL*HLALHL Trigger: AAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGAT...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCATTCATTAATCTGCTCTaGGCTGCTACAGTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIHPQACLPPPEIPDPFINLL*AATVES Trigger: GGATTCTACTGTAGCAGCCCAGAGCAGATTAATGAA...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCACCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIHPQACLPPPEIPDPPFRLI*VKTISF Trigger: GAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGG...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| 3UTR CAA 72 bp | CTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTaGAATTTCAGTAAATGTCATGATACCTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTHHRGPALGC*NFSKCHDTCSR Trigger: TCTGCTGCAGGTATCATGACATTTACTGAAATTCAAGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR CAA 72 bp | AGGGCAGTTTGCATGACAGAGCTCTGCACAGACGTGTaGGAGGGAACTCATACTGGCCTCCTTCGAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RAVCMTELCTDV*EGTHTGLLRKS Trigger: TGATTTTCGAAGGAGGCCAGTATGAGTTCCCTCCAACACGTCTGTGCAGAGCTCTGTCATGCAAACTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPGVMGQKRATMQCPLYSSSVF*DFCPWA Trigger: AGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGA...ATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGCTACTGCTGGTACCAAATGGGCCCGGCTGTTTaGCTTCAATCTTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVKQFAQLSACGRYCWYQMGPAV*LQSFCG Trigger: GCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCAT...TTGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGGGATTGAGCTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTATCCAGTTCAGCCTGGACCCATaGTTAATGAGAGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGIELRLSGLVASAFIQFSLDP*LMRAIC Trigger: GCAAATTGCTCTCATTAAGCATGGGTCCAGGCTGAA...CTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACACCCGGCAACGCTTTTaGAGTTTTCTGAATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPFSIHPQACLPPPEIPDTRQRF*SFLNKV Trigger: GACTTTATTCAGAAAACTGCAAAAGCGTTGCCGGGT...GTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | TCACCAATGCCCACCCCAGCATGGGTGATGGCTAATGAAAGCTGGAAGCCTGGAACCCGGCAACGCTTTTaGAGTTTTCTGAATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPMPTPAWVMANESWKPGTRQRF*SFLNKV Trigger: GACTTTATTCAGAAAACTGCAAAAGCGTTGCCGGGT...TCCAGGCTTCCAGCTTTCATTAGCCATCACCCATGCTGGGGTGGGCATTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAACTCAGGGCCTTGCACATGCTTGCACACACTACTCCACTGAACTAAATTGCTTGTCATCCATGTaGGGGAAGTCGGCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTQGLAHACTHYSTELNCLSSM*GKSAYS Trigger: TGAGTATGCCGACTTCCCGCACATGGATGACAAGCA...ATTTAGTTCAGTGGAGTAGTGTGTGCAAGCATGTGCAAGGCCCTGAGTTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | CGCTACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCTGCTTGTCATCCATGTaGGGGAAGTCGGCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RYCWYQESLDKSFPCLCVCLSSM*GKSAYS Trigger: TGAGTATGCCGACTTCCCGCACATGGATGACAAGCA...GACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCAATGTCAAAGCGTTCTaGTCCGCATGTATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QAWWQVPLSSHSPPVPGSNVKAF*SACMMY Trigger: ATACATCATACATGCGGAGCAGAACGCTTTGACATT...GCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGGAGTGATGGGGCAGAAGAGAGCCACCATGCAGTGTCCCCTTTATGGTCACTTTAGAAAGCCTTaGTATTTGACCCGTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGVMGQKRATMQCPLYGHFRKP*YLTRHA Trigger: AGCATGACGGGTCAAATACCAAGGCTTTCTAAAGTG...ACCATAAAGGGGACACTGCATGGTGGCTCTCTTCTGCCCCATCACTCCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGATTGGGCTTCCACTCCTaGGAAGAGCTCCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTATFKSIYFSKSWLVEGLGFHS*EELHPE Trigger: CTCTGGATGGAGCTCTTCCCAGGAGTGGAAGCCCAA...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | AGCATTGAGGCTGGAGGACCCCAACAAAGGGCTCCATTCAGAGGGCAGTTTGCAATCTTTCTGCGGCTTTaGCATCTAGCTTTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIEAGGPQQRAPFRGQFAIFLRL*HLALHL Trigger: AAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGAT...TGCAAACTGCCCTCTGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | CTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCTTTCATTAATCTGCTCTaGGCTGCTACAGTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LHYLSSWALTIGAQHLGAFINLL*AATVES Trigger: GGATTCTACTGTAGCAGCCCAGAGCAGATTAATGAA...AGCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | ACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCGTCATGCTGCCCGTCTaGGTGCCGACTGACCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: THVKWRMGTATFKSIYFSVMLPV*VPTDLS Trigger: CGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGAC...GCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCTCCATTTTACATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | ACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACAATGTCAAAGCGTTCTaGTCCGCATGTATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TPFSIHPQACLPPPEIPDNVKAF*SACMMY Trigger: ATACATCATACATGCGGAGCAGAACGCTTTGACATT...GTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCAATGTCAAAGCGTTCTaGTCCGCATGTATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TPLLIKLGTHHRGPALGCNVKAF*SACMMY Trigger: ATACATCATACATGCGGAGCAGAACGCTTTGACATT...GCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCGCTCAACAAGGGATCTGCTGGGCCATGGAAAAACCAGAAAACTGCAGAGCAAACTTATTTCTaGGTCAGAAGGCCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQALNKGSAGPWKNQKTAEQTYF*VRRPVR Trigger: TCTTACTGGCCTTCTGACCCAGAAATAAGTTTGCTC...TGCAGTTTTCTGGTTTTTCCATGGCCCAGCAGATCCCTTGTTGAGCGCCTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGCAAGTGCCTTTATCCAGTCACTCACCTCCAGTACCAGGGAGCCTAAGTTCATTAATCTGCTCTaGGCTGCTACAGTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVASAFIQSLTSSTREPKFINLL*AATVES Trigger: GGATTCTACTGTAGCAGCCCAGAGCAGATTAATGAA...CTTAGGCTCCCTGGTACTGGAGGTGAGTGACTGGATAAAGGCACTTGCCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGGGATTGAGCTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTATCCAGCCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGIELRLSGLVASAFIQPFRLI*VKTISF Trigger: GAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGG...CTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGTAGCTCGACAGGGTGGAGAAAATGCCTTGTAGGTAGCTCTAAGTCTCTTTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSSTGWRKCLVGSSKSLSSSVF*DFCPWA Trigger: AGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGA...AAGAGACTTAGAGCTACCTACAAGGCATTTTCTCCACCCTGTCGAGCTACCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAACTCAGGGCCTTGCACATGCTTGCACACACTACTCCACTGAACTAAATTTCAGCCTGGACCCATaGTTAATGAGAGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGTQGLAHACTHYSTELNFSLDP*LMRAIC Trigger: GCAAATTGCTCTCATTAAGCATGGGTCCAGGCTGAA...ATTTAGTTCAGTGGAGTAGTGTGTGCAAGCATGTGCAAGGCCCTGAGTTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCATCAGTATCTGCTTATaGCTTTCTTCATTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVLDSILHSPAGMSSSISICL*LSSFET Trigger: GGTTTCAAATGAAGAAAGGCATAAGCAGATACTGAT...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CCA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGAAGTAAGACACACACATaGGCCCGGCTGTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTATFKSIYFSKSWLVEGSKTHT*ARLFDF Trigger: GAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACT...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR TCA 90 bp | AGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTATCGCTTCTGCCCAAATaGCAGCTCCAACTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RMGTATFKSIYFSKSWLVSLLPK*QLQLLF Trigger: AAACAGGAGTTGGAGCTGTCATTTGGGCAGAAGCGA...TACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | AAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTCCGTCCTTCCATCACCCGGCAACGCTTTTaGAGTTTTCTGAATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNLLINPSPASVSVRPSITRQRF*SFLNKV Trigger: GACTTTATTCAGAAAACTGCAAAAGCGTTGCCGGGT...GATGGAAGGACGGACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| CDS-3UTR GCA 90 bp | ATCCGTTCATCCGTCCTTCCTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGATCAGTATCTGCTTATaGCTTTCTTCATTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IRSSVLPSFQWVLGIELRISICL*LSSFET Trigger: GGTTTCAAATGAAGAAAGGCATAAGCAGATACTGAT...CCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAGGACGGATGAACGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | GTCGCTACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCAGACGGATTCAACTaGCATGTGAATTTGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VATAGTKNLLINPSPASVSDGFN*HVNLRT Trigger: TGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGA...CACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTAGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAACTCAGGGCCTTGCACATGCTTGCACACACTACTCCACTGAACTAAATGAGCAAACTTATTTCTaGGTCAGAAGGCCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGTQGLAHACTHYSTELNEQTYF*VRRPVR Trigger: TCTTACTGGCCTTCTGACCCAGAAATAAGTTTGCTC...ATTTAGTTCAGTGGAGTAGTGTGTGCAAGCATGTGCAAGGCCCTGAGTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTCGAGCAAACTTATTTCTaGGTCAGAAGGCCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAGTKNLLINPSPASVSVEQTYF*VRRPVR Trigger: TCTTACTGGCCTTCTGACCCAGAAATAAGTTTGCTC...GACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTCATCTTTCTGCGGCTTTaGCATCTAGCTTTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAGTKNLLINPSPASVSVIFLRL*HLALHL Trigger: AAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGAT...GACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCGACCAGGTGCATTGTCTTTTCCTCTTGTAAAACAATTCGCTCAACTCAGGATATGCCAATAACCTaGCCTGCACCATGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSTRCIVFSSCKTIRSTQDMPIT*PAPCNA Trigger: GGCATTGCATGGTGCAGGCCAGGTTATTGGCATATC...CTGAGTTGAGCGAATTGTTTTACAAGAGGAAAAGACAATGCACCTGGTCGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | AATAAAAAGATCAGAGGTAACACCACTCTGTGGCTAGTTACAGTTCAGCCTCGTGATATGCCAATAACCTaGCCTGCACCATGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKKIRGNTTLWLVTVQPRDMPIT*PAPCNA Trigger: GGCATTGCATGGTGCAGGCCAGGTTATTGGCATATC...ACGAGGCTGAACTGTAACTAGCCACAGAGTGGTGTTACCTCTGATCTTTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGGCCACTTACACAACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTCTTCACTGGAGCAGTaGAGACCAATGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAGHLHNSCKMENGHSNFSSLEQ*RPMIFM Trigger: CATGAAGATCATTGGTCTTCACTGCTCCAGTGAAGA...AAAGTTGCTGTGCCCATTCTCCATTTTACATGAGTTGTGTAAGTGGCCTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGAACCCGGCAACGCTTTTaGAGTTTTCTGAATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTATFKSIYFSKSWLVEGTRQRF*SFLNKV Trigger: GACTTTATTCAGAAAACTGCAAAAGCGTTGCCGGGT...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGGCCACTTACACAACTCATGTAAAATGGAGAATGGGCACAGCAACTTTATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGHLHNSCKMENGHSNFISLSL*LSSMCG Trigger: CCCGCACATGGATGACAAGCATAAGGACAGAGAAAT...AAAGTTGCTGTGCCCATTCTCCATTTTACATGAGTTGTGTAAGTGGCCTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGATCAGACGGATTCAACTaGCATGTGAATTTGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTATFKSIYFSKSWLVEGSDGFN*HVNLRT Trigger: TGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGA...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGACACTTTAGAAAGCCTTaGTATTTGACCCGTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTATFKSIYFSKSWLVEGHFRKP*YLTRHA Trigger: AGCATGACGGGTCAAATACCAAGGCTTTCTAAAGTG...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| 3UTR CAA 72 bp | GTTTCCTTGTGTTATAAAAGCAAAGAGAAATCAGCATaGAGGCTGGAGGACCCCAACAAAGGGCTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLCYKSKEKSA*RLEDPNKGLHS Trigger: TGAATGGAGCCCTTTGTTGGGGTCCTCCAGCCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | GTACTGTTCTTACACTGGTCTCAAACTATTGCTACTCCATTTAGTATATTGGAAATGGGCCCGGCTGTTTaGCTTCAATCTTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLFLHWSQTIATPFSILEMGPAV*LQSFCG Trigger: GCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCAT...TTCCAATATACTAAATGGAGTAGCAATAGTTTGAGACCAGTGTAAGAACAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | GAGGGAACTCAGGGCCTTGCACATGCTTGCACACACTACTCCACTGAACTAAATATCAGTATCTGCTTATaGCTTTCTTCATTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: EGTQGLAHACTHYSTELNISICL*LSSFET Trigger: GGTTTCAAATGAAGAAAGGCATAAGCAGATACTGAT...ATTTAGTTCAGTGGAGTAGTGTGTGCAAGCATGTGCAAGGCCCTGAGTTCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | CGGTCCAGGTTGGTTTCCTTGTGTTATAAAAGCAAAGAGAAATCAGCATTGAGGATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRLVSLCYKSKEKSALRISLSL*LSSMCG Trigger: CCCGCACATGGATGACAAGCATAAGGACAGAGAAAT...CCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAATCTTTCTGCGGCTTTaGCATCTAGCTTTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RMGTATFKSIYFSKSWLVIFLRL*HLALHL Trigger: AAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGAT...TACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGCCACTTACACAACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTTCATTAATCTGCTCTaGGCTGCTACAGTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGHLHNSCKMENGHSNFFINLL*AATVES Trigger: GGATTCTACTGTAGCAGCCCAGAGCAGATTAATGAA...AAAGTTGCTGTGCCCATTCTCCATTTTACATGAGTTGTGTAAGTGGCCTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | CTTCGAAAATCAAGACTGCTTTCAGTTCAGTCTGCAATAAGCAAATCACACTTTTGCTTGTCATCCATGTaGGGGAAGTCGGCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRKSRLLSVQSAISKSHFCLSSM*GKSAYS Trigger: TGAGTATGCCGACTTCCCGCACATGGATGACAAGCA...AAAGTGTGATTTGCTTATTGCAGACTGAACTGAAAGCAGTCTTGATTTTCGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGCTACTGCTGGTACCACATGCTGCGTTCTTCTaGTTTTATATCTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SCKTIRSTQCMWSLLLVPHAAFF*FYILTS Trigger: AGATGTCAAGATATAAAACCAGAAGAACGCAGCATG...TGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| 3UTR CAA 72 bp | GCAAGCACTAAAACACTACGGTCCAGGTTGGTTTCCTaGTGTTATAAAAGCAAAGAGAAATCAGCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTKTLRSRLVS*CYKSKEKSALR Trigger: CCTCAATGCTGATTTCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR TCA 90 bp | ACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THVKWRMGTATFKSIYFSSSSVF*DFCPWA Trigger: AGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGA...GCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCTCCATTTTACATGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | GCACTAAAACACTACGGTCCAGGTTGGTTTCCTTGTGTTATAAAAGCAAAGAGACCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKHYGPGWFPCVIKAKRPFRLI*VKTISF Trigger: GAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGG...TCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCTGCATCACCTCTGGATAAATACCAGTAGGTACTGTTCTTACACTGGTTTAATGAGAGCAATTTaGCCAGTATGTAAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NWLHHLWINTSRYCSYTGLMRAI*PVCKSS Trigger: TGAAGACTTACATACTGGGCAAATTGCTCTCATTAA...ACCAGTGTAAGAACAGTACCTACTGGTATTTATCCAGAGGTGATGCAGCCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTAAATGTCATGATACCTGCAGCAGATAGAGTTCCAGGAGTGATGGGGATCAGTATCTGCTTATaGCTTTCTTCATTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ISVNVMIPAADRVPGVMGISICL*LSSFET Trigger: GGTTTCAAATGAAGAAAGGCATAAGCAGATACTGAT...CCCCATCACTCCTGGAACTCTATCTGCTGCAGGTATCATGACATTTACTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR GCA 90 bp | GATGGAAATCATTATCCTCAAATGTTAAGGAATTCTAGAAGAGCTCTAGAGCCGTCAGACGGATTCAACTaGCATGTGAATTTGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: DGNHYPQMLRNSRRALEPSDGFN*HVNLRT Trigger: TGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGA...CGGCTCTAGAGCTCTTCTAGAATTCCTTAACATTTGAGGATAATGATTTCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGGTTATTTATACACGGAGTCTTAAAAGATGGCCAGGTCATCGTATTCCCTCCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWLFIHGVLKDGQVIVFPPFRLI*VKTISF Trigger: GAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGG...AGGGAATACGATGACCTGGCCATCTTTTAAGACTCCGTGTATAAATAACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR TCA 90 bp | ACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAGCAGTGAAGACCAATaGTCTTCATGTTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: THVKWRMGTATFKSIYFSSSEDQ*SSCFSP Trigger: TGGTGAAAAACATGAAGATCATTGGTCTTCACTGCT...GCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCTCCATTTTACATGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR GCA 90 bp | TTAATTGTCATCCTTGCAATCCAAAATAACTACCCATCAAAAGAAGATCGCCTCAATGTCAAAGCGTTCTaGTCCGCATGTATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIVILAIQNNYPSKEDRLNVKAF*SACMMY Trigger: ATACATCATACATGCGGAGCAGAACGCTTTGACATT...GAGGCGATCTTCTTTTGATGGGTAGTTATTTTGGATTGCAAGGATGACAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | ACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCCATGCTGCGTTCTTCTaGTTTTATATCTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: THVKWRMGTATFKSIYFSHAAFF*FYILTS Trigger: AGATGTCAAGATATAAAACCAGAAGAACGCAGCATG...GCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCTCCATTTTACATGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CCA 90 bp | CTTCGAAAATCAAGACTGCTTTCAGTTCAGTCTGCAATAAGCAAATCACACTTTCATGCTGCGTTCTTCTaGTTTTATATCTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKSRLLSVQSAISKSHFHAAFF*FYILTS Trigger: AGATGTCAAGATATAAAACCAGAAGAACGCAGCATG...AAAGTGTGATTTGCTTATTGCAGACTGAACTGAAAGCAGTCTTGATTTTCGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| 3UTR CAA 72 bp | ACCAGTAGGTACTGTTCTTACACTGGTCTCAAACTATaGCTACTCCATTTAGTATATTGGAAGATCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: TSRYCSYTGLKL*LLHLVYWKIIY Trigger: GTATATGATCTTCCAATATACTAAATGGAGTAGCAATAGTTTGAGACCAGTGTAAGAACAGTACCTACTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS TCA 90 bp | AAGCCTTGGTATTTGACCCGTCATGCTGCCCGTCTGCGTGCCGACTaGCCTCTCGGCCCCGGAACCCTCCAAACTCTGCATCTGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KPWYLTRHAARLRAD*PLGPGTLQTLHLIR Trigger: ACGGATCAGATGCAGAGTTTGGAGGGTTCCGGGGCCGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGACGGGTCAAATACCAAGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPPSLSSTPFSIHPQACHGPGC*TSIFLR Trigger: CCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATG...ACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCAGCACCATGCAATGCCTaGCAACTTCCTGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TPPPPSLSSTPFSIHPQAAPCNA*QLPVAN Trigger: GTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGC...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | CCGTCCTTCCTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGTTGTCAGGCTCATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFLPSSGFWGLSSGCQAHGPGC*TSIFLR Trigger: CCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATG...AGCCTGACAACCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAGGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCCGAAGTGTTTCAAGTaGGGCACACTAGAAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: PPPPSLSSTPFSIHPQACPKCFK*GTLEAT Trigger: AGTAGCTTCTAGTGTGCCCAACTTGAAACACTTCGG...ACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS GCA 90 bp | CCAGACGTGGCCTCTTGCTGCTGCGCTGTTCGTCCTTTGCAGACCTaGGCCTCAATACACCGTTTTCTCTCCTTTCAGGCTCATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PDVASCCCAVRPLQT*ASIHRFLSFQAHLG Trigger: ACCCAAATGAGCCTGAAAGGAGAGAAAACGGTGTATTGAGGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056997.15 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCTCCTGAGATACCGGACCCACTGAGATTTTTGCCCTaGGGCTTCCACTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSIHPQACLPPPEIPDPLRFLP*GFHSWE Trigger: TTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAG...TGGGTCCGGTATCTCAGGAGGAGGAAGACATGCCTGCGGGTGAATGGAGAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | GCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATGTCTTCCTCCCTGGTCAACTCTTCATaGTCTCCTAAGGGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: AFLVLDSILHSPAGMSSSLVNSS*SPKGPR Trigger: CCGTGGTCCCTTAGGAGACAATGAAGAGTTGACCAG...GGAGGAAGACATGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCACATCACAGGGGCATTTaGTCACAAAAATCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPPPPSLSSTPFSIHPQAHHRGI*SQKSCC Trigger: GCAGCATGATTTTTGTGACAAAATGCCCCTGTGATG...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | ATCCGTTCATCCGTCCTTCCTTCCTTCCAGTGGGTTCTGGGGATTGAGCTCAGGGCACCATGCAATGCCTaGCAACTTCCTGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRSSVLPSFQWVLGIELRAPCNA*QLPVAN Trigger: GTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGC...CCTGAGCTCAATCCCCAGAACCCACTGGAAGGAAGGAAGGACGGATGAACGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGAAGTGACTCAAAGACATCTGCCTCACTCACCAATGCCCACCCCAGCAGCACCATGCAATGCCTaGCAACTTCCTGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GAEVTQRHLPHSPMPTPAAPCNA*QLPVAN Trigger: GTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGC...TGCTGGGGTGGGCATTGGTGAGTGAGGCAGATGTCTTTGAGTCACTTCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCCCGCCGCCTTCCTTGTCCTCGACTCCATTCTCCATTCACCCGCAGGCATCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TPPPPSLSSTPFSIHPQASFQAH*GQDYKL Trigger: AAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGA...TGCCTGCGGGTGAATGGAGAATGGAGTCGAGGACAAGGAAGGCGGCGGGGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTGGGGATTGAGCTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTATCCAGCTGAGATTTTTGCCCTaGGGCTTCCACTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLGIELRLSGLVASAFIQLRFLP*GFHSWE Trigger: TTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAG...CTGGATAAAGGCACTTGCCACCAAGCCTGACAACCTGAGCTCAATCCCCAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | GGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGAAGGATCCAGACGTGGCCTCTaGCTGCTGCGCTGTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTATFKSIYFSKSWLVEGSRRGL*LLRCSS Trigger: GGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGA...TCCTTCTACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CAA 90 bp | ACTCCATTACTTATCAAGCTGGGCACTCACCATAGGGGCCCAGCACTTGGGTGCCCGAAGTGTTTCAAGTaGGGCACACTAGAAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TPLLIKLGTHHRGPALGCPKCFK*GTLEAT Trigger: AGTAGCTTCTAGTGTGCCCAACTTGAAACACTTCGG...GCACCCAAGTGCTGGGCCCCTATGGTGAGTGCCCAGCTTGATAAGTAATGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTCCTGGTCAACTCTTCATaGTCTCCTAAGGGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: TAGTKNLLINPSPASVSVLVNSS*SPKGPR Trigger: CCGTGGTCCCTTAGGAGACAATGAAGAGTTGACCAG...GACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGTAGCTCGACAGGGTGGAGAAAATGCCTTGTAGGTAGCTCTAAGTCTCTTCTGGTCAACTCTTCATaGTCTCCTAAGGGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSSTGWRKCLVGSSKSLLVNSS*SPKGPR Trigger: CCGTGGTCCCTTAGGAGACAATGAAGAGTTGACCAG...AAGAGACTTAGAGCTACCTACAAGGCATTTTCTCCACCCTGTCGAGCTACCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS TCA 90 bp | TCTTCATTGTCTCCTAAGGGACCACGGCTTTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCTTCCACTCCTGGGAAGAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSPKGPRLSSSVF*DFCPWASTPGKSSI Trigger: GATGGAGCTCTTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGAAAGCCGTGGTCCCTTAGGAGACAATGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | TACTGCTGGTACCAAGAATCTCTTGATAAATCCTTCCCCTGCCTCTGTGTCCGTCTGAGATTTTTGCCCTaGGGCTTCCACTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YCWYQESLDKSFPCLCVRLRFLP*GFHSWE Trigger: TTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAG...ACGGACACAGAGGCAGGGGAAGGATTTATCAAGAGATTCTTGGTACCAGCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGCTACTGCTGGTACCACATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCKTIRSTQCMWSLLLVPHGPGC*TSIFLR Trigger: CCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATG...TGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
||
| CDS GCA 90 bp | GAAGTACATGGCTCCAGTCCCATCGCAGCTTCTAGATTTCGCTTCTaGCCAAATGACAGCTCCAACTCCTGTTTTATGATCCTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVHGSSPIAASRFRF*PNDSSNSCFMILSS Trigger: CGAACTGAGGATCATAAAACAGGAGTTGGAGCTGTCATTTGGGCAGAAGCGAAATCTAGAAGCTGCGATGGGACTGGAGCCATGTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
||
| CDS GCA 90 bp | TCCGCATGTATGATGTATCTGAACTTCCGTATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGGAAGTCGGCATACTCAGAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SACMMYLNFRISLSL*LSSMCGKSAYSEPT Trigger: CGTGGGCTCTGAGTATGCCGACTTCCCGCACATGGATGACAAGCATAAGGACAGAGAAATACGGAAGTTCAGATACATCATACATGCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGCCACTTACACAACTCATGTAAAATGGAGAATGGGCACAGCAACTTTCATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGHLHNSCKMENGHSNFHGPGC*TSIFLR Trigger: CCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATG...AAAGTTGCTGTGCCCATTCTCCATTTTACATGAGTTGTGTAAGTGGCCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS CCA 90 bp | CTCCAACTCCTGTTTTATGATCCTCAGTTCGATATGCCAATAACCTaGCCTGCACCATGCAATGCCTTGCAACTTCCTGTGGCAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLLFYDPQFDMPIT*PAPCNALQLPVANS Trigger: AGAGTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGCAGGCCAGGTTATTGGCATATCGAACTGAGGATCATAAAACAGGAGTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | AGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTACTGAGATTTTTGCCCTaGGGCTTCCACTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RMGTATFKSIYFSKSWLVLRFLP*GFHSWE Trigger: TTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAG...TACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CAA 90 bp | AGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAAGTCCTGGCTGGTAGCACCATGCAATGCCTaGCAACTTCCTGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RMGTATFKSIYFSKSWLVAPCNA*QLPVAN Trigger: GTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGC...TACCAGCCAGGACTTGCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
||
| CDS-3UTR CAA 90 bp | GAATCAACACATTTATTAGGTTGCTTACAGGAATATGGGGGAAGCATTGCTTATTCCAGACGTGGCCTCTaGCTGCTGCGCTGTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESTHLLGCLQEYGGSIAYSRRGL*LLRCSS Trigger: GGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGA...ATAAGCAATGCTTCCCCCATATTCCTGTAAGCAACCTAATAAATGTGTTGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
||
| CDS CCA 90 bp | AGACCTGCGCCTCAATACACCGTTTTCTCTCCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTCAGACGGATTCAACTGCCATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPAPQYTVFSPFRLI*VKTISFRRIQLPCE Trigger: TTCACATGGCAGTTGAATCCGTCTGAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGAGAGAAAACGGTGTATTGAGGCGCAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056997.15 ENSMUST00000225839.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGATCAGAGGTAACACCACTCTGTGGCTAGTTACAGTTCAGCCTCGTCTGGTCAACTCTTCATaGTCTCCTAAGGGACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: NKKIRGNTTLWLVTVQPRLVNSS*SPKGPR Trigger: CCGTGGTCCCTTAGGAGACAATGAAGAGTTGACCAG...ACGAGGCTGAACTGTAACTAGCCACAGAGTGGTGTTACCTCTGATCTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS TCA 90 bp | CATTTGGGTCAAGACTATAAGCTTCAGACGGATTCAACTGCCATGTaGATTTGCGAACACCCTCAAGCTCCCCAAACTTCATGTACGAGA | + |
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Preference number: 5 (lower is better) Translates to: HLGQDYKLQTDSTAM*ICEHPQAPQTSCTR Trigger: TCTCGTACATGAAGTTTGGGGAGCTTGAGGGTGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGAAGCTTATAGTCTTGACCCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGCTACTGCTGGTACCACATCACAGGGGCATTTaGTCACAAAAATCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SCKTIRSTQCMWSLLLVPHHRGI*SQKSCC Trigger: GCAGCATGATTTTTGTGACAAAATGCCCCTGTGATG...TGGTACCAGCAGTAGCGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAAGATCAGAGGTAACACCACTCTGTGGCTAGTTACAGTTCAGCCTCGTCCGAAGTGTTTCAAGTaGGGCACACTAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: NKKIRGNTTLWLVTVQPRPKCFK*GTLEAT Trigger: AGTAGCTTCTAGTGTGCCCAACTTGAAACACTTCGG...ACGAGGCTGAACTGTAACTAGCCACAGAGTGGTGTTACCTCTGATCTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS-3UTR CAA 90 bp | AACTGGCTGCATCACCTCTGGATAAATACCAGTAGGTACTGTTCTTACACTGGTCATCACAGGGGCATTTaGTCACAAAAATCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: NWLHHLWINTSRYCSYTGHHRGI*SQKSCC Trigger: GCAGCATGATTTTTGTGACAAAATGCCCCTGTGATG...ACCAGTGTAAGAACAGTACCTACTGGTATTTATCCAGAGGTGATGCAGCCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS CCA 90 bp | AACTTCCTGTGGCAAACTCTGATTGTGAATTTCATTAATCTGCTCTaGGCTGCTACAGTAGAATCCGAAGTGTTTCAAGTTGGGCACACT | + |
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Preference number: 5 (lower is better) Translates to: NFLWQTLIVNFINLL*AATVESEVFQVGHT Trigger: AGTGTGCCCAACTTGAAACACTTCGGATTCTACTGTAGCAGCCCAGAGCAGATTAATGAAATTCACAATCAGAGTTTGCCACAGGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CCA 90 bp | GGATCTTTTGATGGACAGATGCTTTTCTCTCCTTTCAGGCTCATTTaGGTCAAGACTATAAGCTTCAGACGGATTCAACTGCCATGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GSFDGQMLFSPFRLI*VKTISFRRIQLPCE Trigger: TTCACATGGCAGTTGAATCCGTCTGAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGAGAGAAAAGCATCTGTCCATCAAAAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171683.3 |
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| CDS TCA 90 bp | CAATTTGCCCAGTATGTAAGTCTTCACTGGAGCAGTGAAGACCAATaGTCTTCATGTTTTTCACCACCACAAGACCAGTTTTCTTCACCT | + |
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Preference number: 5 (lower is better) Translates to: QFAQYVSLHWSSEDQ*SSCFSPPQDQFSSP Trigger: AGGTGAAGAAAACTGGTCTTGTGGTGGTGAAAAACATGAAGATCATTGGTCTTCACTGCTCCAGTGAAGACTTACATACTGGGCAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | ACTCATGTAAAATGGAGAATGGGCACAGCAACTTTTAAGTCCATCTATTTCAGCAGTTTTCTGAGATTTTaGCCCTTGGGCTTCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: THVKWRMGTATFKSIYFSSFLRF*PLGFHS Trigger: GGAGTGGAAGCCCAAGGGCAAAAATCTCAGAAAACT...GCTGAAATAGATGGACTTAAAAGTTGCTGTGCCCATTCTCCATTTTACATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS-3UTR CAA 90 bp | GATGGAAATCATTATCCTCAAATGTTAAGGAATTCTAGAAGAGCTCTAGAGCCGCCGAAGTGTTTCAAGTaGGGCACACTAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: DGNHYPQMLRNSRRALEPPKCFK*GTLEAT Trigger: AGTAGCTTCTAGTGTGCCCAACTTGAAACACTTCGG...CGGCTCTAGAGCTCTTCTAGAATTCCTTAACATTTGAGGATAATGATTTCCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | GCACTAAAACACTACGGTCCAGGTTGGTTTCCTTGTGTTATAAAAGCAAAGAGACATCACAGGGGCATTTaGTCACAAAAATCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALKHYGPGWFPCVIKAKRHHRGI*SQKSCC Trigger: GCAGCATGATTTTTGTGACAAAATGCCCCTGTGATG...TCTCTTTGCTTTTATAACACAAGGAAACCAACCTGGACCGTAGTGTTTTAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAAGATCAGAGGTAACACCACTCTGTGGCTAGTTACAGTTCAGCCTCGTTCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NKKIRGNTTLWLVTVQPRSFQAH*GQDYKL Trigger: AAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGA...ACGAGGCTGAACTGTAACTAGCCACAGAGTGGTGTTACCTCTGATCTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS-3UTR CAA 90 bp | TGCATTGTCTTTTCCTCTTGTAAAACAATTCGCTCAACTCAGTGCATGTGGTCGTCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CIVFSSCKTIRSTQCMWSSFQAH*GQDYKL Trigger: AAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGA...CGACCACATGCACTGAGTTGAGCGAATTGTTTTACAAGAGGAAAAGACAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167100.9 ENSMUST00000225839.2 |
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| CDS-3UTR CAA 90 bp | GATGGAAATCATTATCCTCAAATGTTAAGGAATTCTAGAAGAGCTCTAGAGCCGTCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGNHYPQMLRNSRRALEPSFQAH*GQDYKL Trigger: AAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGA...CGGCTCTAGAGCTCTTCTAGAATTCCTTAACATTTGAGGATAATGATTTCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS GCA 72 bp | CCCGACCTGCAGAGCGGGTTTCCAGACGTGGCCTCTTaGTGCTGCGCTGTTCGTCCTTTGCAGACCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDLQSGFPDVAS*CCAVRPLQTCA Trigger: GGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGTCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS CAA 72 bp | GCCCGACCTGCAGAGCGGGTTTCCAGACGTGGCCTCTaGCTGCTGCGCTGTTCGTCCTTTGCAGACCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARPAERVSRRGL*LLRCSSFADLR Trigger: GCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGTCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS GCA 72 bp | GCCTTGGTATTTGACCCGTCATGCTGCCCGTCTGCGTaGCGACTGACCTCTCGGCCCCGGAACCCTCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALVFDPSCCPSA*RLTSRPRNPPN Trigger: GTTTGGAGGGTTCCGGGGCCGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGACGGGTCAAATACCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS GCA 72 bp | GACCTGCAGAGCGGGTTTCCAGACGTGGCCTCTTGCTaGTGCGCTGTTCGTCCTTTGCAGACCTGCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DLQSGFPDVASC*CAVRPLQTCAS Trigger: TGAGGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056997.15 |
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| CDS GCA 72 bp | CTGATCCTGCAGAGCGGGTTTCCAGACGTGGCCTCTTaGTGCTGCGCTGTTCGTCCTTTGCAGACCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LILQSGFPDVAS*CCAVRPLQTCA Trigger: GGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGATCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS CAA 72 bp | GCTGATCCTGCAGAGCGGGTTTCCAGACGTGGCCTCTaGCTGCTGCGCTGTTCGTCCTTTGCAGACCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ADPAERVSRRGL*LLRCSSFADLR Trigger: GCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGATCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS TCA 72 bp | TATTTGACCCGTCATGCTGCCCGTCTGCGTGCCGACTaGCCTCTCGGCCCCGGAACCCTCCAAACTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLTRHAARLRAD*PLGPGTLQTLH Trigger: ATGCAGAGTTTGGAGGGTTCCGGGGCCGAGAGGTCAGTCGGCACGCAGACGGGCAGCATGACGGGTCAAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS GCA 72 bp | ATCCTGCAGAGCGGGTTTCCAGACGTGGCCTCTTGCTaGTGCGCTGTTCGTCCTTTGCAGACCTGCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILQSGFPDVASC*CAVRPLQTCAS Trigger: TGAGGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225839.2 |
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| CDS GCA 72 bp | CTGCAGAGCGGGTTTCCAGACGTGGCCTCTTGCTGCTaGGCTGTTCGTCCTTTGCAGACCTGCGCCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LQSGFPDVASCC*AVRPLQTCASI Trigger: TATTGAGGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGCCACGTCTGGAAACCCGCTCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056997.15 ENSMUST00000225839.2 |
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| CDS CAA 90 bp | TCCATGTGCGGGAAGTCGGCATACTCAGAGCCCACGGGAAAGGCATaGTACCCGCACCCTATGAAGTACATGGCTCCAGTCCCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SMCGKSAYSEPTGKA*YPHPMKYMAPVPSQ Trigger: CTGCGATGGGACTGGAGCCATGTACTTCATAGGGTGCGGGTACAATGCCTTTCCCGTGGGCTCTGAGTATGCCGACTTCCCGCACATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | GGGAAGTCGGCATACTCAGAGCCCACGGGAAAGGCATaGTACCCGCACCCTATGAAGTACATGGCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GKSAYSEPTGKA*YPHPMKYMAPV Trigger: GACTGGAGCCATGTACTTCATAGGGTGCGGGTACAATGCCTTTCCCGTGGGCTCTGAGTATGCCGACTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS GCA 72 bp | GCCTCTTGCTGCTGCGCTGTTCGTCCTTTGCAGACCTaGGCCTCAATACACCGTTTTCTCTCCTTTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASCCCAVRPLQT*ASIHRFLSFQA Trigger: AGCCTGAAAGGAGAGAAAACGGTGTATTGAGGCGCAGGTCTGCAAAGGACGAACAGCGCAGCAGCAAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056997.15 ENSMUST00000225839.2 |
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| CDS CCA 72 bp | ACTGAGCAGGGTGAAAAGGTTCACTTTAGAAAGCCTTaGTATTTGACCCGTCATGCTGCCCGTCTGCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TEQGEKVHFRKP*YLTRHAARLRA Trigger: GGCACGCAGACGGGCAGCATGACGGGTCAAATACCAAGGCTTTCTAAAGTGAACCTTTTCACCCTGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | ACGGCTGGAGTAAGACACACACATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGGCTTTGGCATCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TAGVRHTHGPGC*TSIFLRLWHLA Trigger: AGCTAGATGCCAAAGCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACTCCAGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS TCA 72 bp | TCTCCTAAGGGACCACGGCTTTCCTCTTCAGTTTTCTaGGATTTTTGCCCTTGGGCTTCCACTCCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPKGPRLSSSVF*DFCPWASTPGK Trigger: CTTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAGAAAACTGAAGAGGAAAGCCGTGGTCCCTTAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CCA 72 bp | AGTTTTCTGAGATTTTTGCCCTTGGGCTTCCACTCCTaGGAAGAGCTCCATCCAGAGACTGAGCAGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFLRFLPLGFHS*EELHPETEQGE Trigger: TTCACCCTGCTCAGTCTCTGGATGGAGCTCTTCCCAGGAGTGGAAGCCCAAGGGCAAAAATCTCAGAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 90 bp | AACACACCAACGGCTGGAGTAAGACACACACATGGGCCCGGCTGTTaGACTTCAATCTTTCTGCGGCTTTGGCATCTAGCTTTGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: NTPTAGVRHTHGPGC*TSIFLRLWHLALHL Trigger: AAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATGTGTGTGTCTTACTCCAGCCGTTGGTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS GCA 72 bp | GGCTCCAGTCCCATCGCAGCTTCTAGATTTCGCTTCTaGCCAAATGACAGCTCCAACTCCTGTTTTATGATC | + |
|
Preference number: 6 (lower is better) Translates to: GSSPIAASRFRF*PNDSSNSCFMI Trigger: GATCATAAAACAGGAGTTGGAGCTGTCATTTGGGCAGAAGCGAAATCTAGAAGCTGCGATGGGACTGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 90 bp | ACACACACATGGGCCCGGCTGTTTGACTTCAATCTTTCTGCGGCTTaGGCATCTAGCTTTGCATCTTCAGAACTAGAAGCTTCAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: THTWARLFDFNLSAA*ASSFASSELEASVS Trigger: GCTCACTGAAGCTTCTAGTTCTGAAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCATGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 90 bp | GCATGTATGATGTATCTGAACTTCCGTATTTCTCTGTCCTTATGCTaGTCATCCATGTGCGGGAAGTCGGCATACTCAGAGCCCACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACMMYLNFRISLSLC*SSMCGKSAYSEPTG Trigger: TCCCGTGGGCTCTGAGTATGCCGACTTCCCGCACATGGATGACAAGCATAAGGACAGAGAAATACGGAAGTTCAGATACATCATACATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | TGGGCCCGGCTGTTTGACTTCAATCTTTCTGCGGCTTaGGCATCTAGCTTTGCATCTTCAGAACTAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WARLFDFNLSAA*ASSFASSELEA Trigger: AGCTTCTAGTTCTGAAGATGCAAAGCTAGATGCCAAAGCCGCAGAAAGATTGAAGTCAAACAGCCGGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CCA 72 bp | CTGTTTTATGATCCTCAGTTCGATATGCCAATAACCTaGCCTGCACCATGCAATGCCTTGCAACTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFYDPQFDMPIT*PAPCNALQLPV Trigger: CACAGGAAGTTGCAAGGCATTGCATGGTGCAGGCCAGGTTATTGGCATATCGAACTGAGGATCATAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS TCA 72 bp | CAAGACTATAAGCTTCAGACGGATTCAACTGCCATGTaGATTTGCGAACACCCTCAAGCTCCCCAAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QDYKLQTDSTAM*ICEHPQAPQTS Trigger: TGAAGTTTGGGGAGCTTGAGGGTGTTCGCAAATTCACATGGCAGTTGAATCCGTCTGAAGCTTATAGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | GATATGCCAATAACCTGGCCTGCACCATGCAATGCCTaGCAACTTCCTGTGGCAAACTCTGATTGTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: DMPITWPAPCNA*QLPVANSDCEF Trigger: AAATTCACAATCAGAGTTTGCCACAGGAAGTTGCAAGGCATTGCATGGTGCAGGCCAGGTTATTGGCATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | CGGTTGTGGCTGATCTTTCTCTCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTTCAGACGGATTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLWLIFLSFQAH*GQDYKLQTDST Trigger: AGTTGAATCCGTCTGAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGAGAGAAAGATCAGCCACAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022555.11 |
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| CDS GCA 72 bp | ATGATGTATCTGAACTTCCGTATTTCTCTGTCCTTATaGTTGTCATCCATGTGCGGGAAGTCGGCATACTCA | + |
|
Preference number: 6 (lower is better) Translates to: MMYLNFRISLSL*LSSMCGKSAYS Trigger: TGAGTATGCCGACTTCCCGCACATGGATGACAAGCATAAGGACAGAGAAATACGGAAGTTCAGATACATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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| CDS CAA 72 bp | GCCTCAATACACCGTTTTCTCTCCTTTCAGGCTCATTaGGGTCAAGACTATAAGCTTCAGACGGATTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: ASIHRFLSFQAH*GQDYKLQTDST Trigger: AGTTGAATCCGTCTGAAGCTTATAGTCTTGACCCAAATGAGCCTGAAAGGAGAGAAAACGGTGTATTGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056997.15 ENSMUST00000225839.2 |
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| CDS GCA 72 bp | TCACACAGGCTCTCCAGACCTATAGTCATCAGTATCTaGTTATGCCTTTCTTCATTTGAAACCAAAAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: SHRLSRPIVISI*LCLSSFETKNN Trigger: GTTATTTTTGGTTTCAAATGAAGAAAGGCATAAGCAGATACTGATGACTATAGGTCTGGAGAGCCTGTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022555.11 ENSMUST00000056997.15 ENSMUST00000167100.9 ENSMUST00000171683.3 ENSMUST00000225839.2 |
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