Pregenerated sensors for CD99L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035776Ensembl transcript IDs: ENSMUST00000037391.12, ENSMUST00000080035.11, ENSMUST00000114586.9, ENSMUST00000114587.3
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCATAGAACCTAGAGACTGCCTAACCAGAAACGTTCTGCAGTGCTaGCCCAACCATCCTCTGGGCCACCCCCACCTTGGGCATCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: FIEPRDCLTRNVLQC*PNHPLGHPHLGHPP Trigger: AGGAGGATGCCCAAGGTGGGGGTGGCCCAGAGGATGGTTGGGGCAGCACTGCAGAACGTTTCTGGTTAGGCAGTCTCTAGGTTCTATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR GCA 90 bp | GATTTCATAGAACCTAGAGACTGCCTAACCAGAAACGTTCTGCAGTaGTGCCCCAACCATCCTCTGGGCCACCCCCACCTTGGGCATCCT | + |
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Preference number: 1 (lower is better) Translates to: DFIEPRDCLTRNVLQ*CPNHPLGHPHLGHP Trigger: AGGATGCCCAAGGTGGGGGTGGCCCAGAGGATGGTTGGGGCAGCACTGCAGAACGTTTCTGGTTAGGCAGTCTCTAGGTTCTATGAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | CAGGCAGATCCAGCCCAAACTAGGGGTAGCAGTCAGCTCTGGCCCTaGCCCTTGGTTTCCTGTATTTACCGCTATGAACATGGTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: QADPAQTRGSSQLWP*PLVSCIYRYEHGQS Trigger: GCTCTGACCATGTTCATAGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACTGCTACCCCTAGTTTGGGCTGGATCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR TCA 90 bp | CAGTCAGCTCTGGCCCTGGCCCTTGGTTTCCTGTATTTACCGCTATaGACATGGTCAGAGCCCTTTTCAGAGCAGACAGGGAGGACAGCT | + |
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Preference number: 1 (lower is better) Translates to: QSALALALGFLYLPL*TWSEPFSEQTGRTA Trigger: AGCTGTCCTCCCTGTCTGCTCTGAAAAGGGCTCTGACCATGTTCATAGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | ATCCAGCCCAAACTAGGGGTAGCAGTCAGCTCTGGCCCTGGCCCTTaGTTTCCTGTATTTACCGCTATGAACATGGTCAGAGCCCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: IQPKLGVAVSSGPGP*FPVFTAMNMVRALF Trigger: GAAAAGGGCTCTGACCATGTTCATAGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACTGCTACCCCTAGTTTGGGCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | TACAATAAGCAGCCAGTGGCATGGGAAGAAACTTGGGGAAAGGATTaGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: YNKQPVAWEETWGKD*QMKSGAGSQAVASF Trigger: GAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGCCACTGGCTGCTTATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | TTTTTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTaGATCCTCAGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: FFHLSVIFPVLQLPY*ILRPGPSGTKGQAK Trigger: CTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | GAAACTAGCTTAGCTTTCACCTGCAGGGTTCACTATCAAGCTCACTaGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: ETSLAFTCRVHYQAH*SQRNNPGSRQIQPK Trigger: TTTGGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATAGTGAACCCTGCAGGTGAAAGCTAAGCTAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR GCA 90 bp | GTTGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTGACACACATTaGTTTCAGAAGTGCCGTTTGACGTGGCAAACTATTAGTTCATAT | + |
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Preference number: 1 (lower is better) Translates to: VVQRSCRSCLHSDTH*FQKCRLTWQTISSY Trigger: ATATGAACTAATAGTTTGCCACGTCAAACGGCACTTCTGAAAGCAATGTGTGTCACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | TGCCTTCACAGTGACACACATTGCTTTCAGAAGTGCCGTTTGACGTaGCAAACTATTAGTTCATATGGGGTGGAAACTAGCTTAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: CLHSDTHCFQKCRLT*QTISSYGVETSLAF Trigger: GAAAGCTAAGCTAGTTTCCACCCCATATGAACTAATAGTTTGCCACGTCAAACGGCACTTCTGAAAGCAATGTGTGTCACTGTGAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR TCA 90 bp | AGCTCCCATATGCTCCTTCTTTCTAATCTTGGGGTAAGACTATTGTaGGACCATGTTTGCACTAAAATCACTGAAGAGCCTTCACCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SSHMLLLSNLGVRLL*DHVCTKITEEPSPG Trigger: TCCAGGTGAAGGCTCTTCAGTGATTTTAGTGCAAACATGGTCTCACAATAGTCTTACCCCAAGATTAGAAAGAAGGAGCATATGGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CCA 90 bp | GTTTGCACTAAAATCACTGAAGAGCCTTCACCTGGACAAGCTCTCTaGAAGCTGACCAATATGAAACATGAAGTTGGGAAGAACAATCGA | + |
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Preference number: 1 (lower is better) Translates to: VCTKITEEPSPGQAL*KLTNMKHEVGKNNR Trigger: TCGATTGTTCTTCCCAACTTCATGTTTCATATTGGTCAGCTTCCAGAGAGCTTGTCCAGGTGAAGGCTCTTCAGTGATTTTAGTGCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR TCA 90 bp | TTGAGACTGTTGAGCATTTTTAAAGTTCTTCCTGTCAAGTTTCACTaGTCGAGATCTGATCTTGGCAATTGGCTCTTCTGCTTCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LRLLSIFKVLPVKFH*SRSDLGNWLFCFIW Trigger: CCAAATGAAGCAGAAGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTTTAAAAATGCTCAACAGTCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGGCCCCAACCATCCTCTaGGCCACCCCCACCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRAPTIL*ATPTLG Trigger: GCCCAAGGTGGGGGTGGCCCAGAGGATGGTTGGGGC...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGCATGGCCGTGGGGTTTaGGGGCTTTGCCATCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRHGRGV*GLCHQT Trigger: TGTCTGATGGCAAAGCCCTCAAACCCCACGGCCATG...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGTCTGGCCCTGGCCCTTaGTTTCCTGTATTTACCGCT | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRSGPGP*FPVFTA Trigger: AGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGA...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGTGCAGAAGGGCTTTATaGAAAAGGCACCGAGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRCRRAL*KRHRGS Trigger: GCTACCTCGGTGCCTTTTGCATAAAGCCCTTCTGCA...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTACAGGACCAGTCCCAAGCCTTCTGCAGGCCACAATGCCCCACCAAGTATGGTAGCAGTCAGCTCTaGCCCTGGCCCTTGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QLQDQSQAFCRPQCPTKYGSSQL*PWPLVS Trigger: GGAAACCAAGGGCCAGGGCCAGAGCTGACTGCTACC...ATACTTGGTGGGGCATTGTGGCCTGCAGAAGGCTTGGGACTGGTCCTGTAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGCATCTCATCGCCCAGAAAGGATTGGCAAATaGAATCCGGAGCTGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RPGPSGTKGQAKGASHRPERIGK*NPELGH Trigger: GTGACCCAGCTCCGGATTTCATTTGCCAATCCTTTC...TGGGCGATGAGATGCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGGCATGGGAAGAAACTTaGGGAAAGGATTGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRAWEET*GKDWQM Trigger: CATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGC...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGCAGCTTGGTGCTGTCTaGTTTGTCTTAAAATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRQLGAV*FVLKWV Trigger: AACCCATTTTAAGACAAATCAGACAGCACCAAGCTG...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | CCGGAGATCCCTACACAGTCTGATAGGAATCCAACCGCAAGTCACAGCTCCCATAACGTTCTGCAGTGCTaGCCCAACCATCCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PEIPTQSDRNPTASHSSHNVLQC*PNHPLG Trigger: GCCCAGAGGATGGTTGGGGCAGCACTGCAGAACGTT...ATGGGAGCTGTGACTTGCGGTTGGATTCCTATCAGACTGTGTAGGGATCTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGAACACACTCAAGGCATaGATTAGACAGCACAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRNTLKA*IRQHKS Trigger: ACTCTTGTGCTGTCTAATGCATGCCTTGAGTGTGTT...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGAGCTTATGGGATATATaGGGCCAATCATGTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SPAPGMKLYEQEADGPLRSLWDI*GQSCCP Trigger: TGGACAACATGATTGGCCCCATATATCCCATAAGCT...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTACAGGACCAGTCCCAAGCCTTCTGCAGGCCACAATGCCCCACCAAGTATGGTGTTCAGGCTGCCTaGAAACATGACACCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: QLQDQSQAFCRPQCPTKYGVQAA*KHDTTS Trigger: GCTGGTGGTGTCATGTTTCCAGGCAGCCTGAACACC...ATACTTGGTGGGGCATTGTGGCCTGCAGAAGGCTTGGGACTGGTCCTGTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACGAAAGGATTGGCAAATaGAATCCGGAGCTGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYERIGK*NPELGH Trigger: GTGACCCAGCTCCGGATTTCATTTGCCAATCCTTTC...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTAACGTTCTGCAGTGCTaGCCCAACCATCCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GLCHQTGLSIKVDNPPEINVLQC*PNHPLG Trigger: GCCCAGAGGATGGTTGGGGCAGCACTGCAGAACGTT...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACTGCAGAAGGGCTTTATaGAAAAGGCACCGAGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYCRRAL*KRHRGS Trigger: GCTACCTCGGTGCCTTTTGCATAAAGCCCTTCTGCA...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACCCACCAAGTATAAAATaGCAGTGGGAAGGAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYPPSIK*QWEGGA Trigger: GGCTCCTCCTTCCCACTGGCATTTTATACTTGGTGG...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACTTTACATCATGGCCGTaGGGTTTGAGGGCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYFTSWP*GLRALP Trigger: TGGCAAAGCCCTCAAACCCCACGGCCATGATGTAAA...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CAA 90 bp | GATCCAGCCCAAACTAGGGGTAGCAGTCAGCTCTGGCCCTGGCCCTaGGTTTCCTGTATTTACCGCTATGAACATGGTCAGAGCCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: DPAQTRGSSQLWPWP*VSCIYRYEHGQSPF Trigger: AAAAGGGCTCTGACCATGTTCATAGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACTGCTACCCCTAGTTTGGGCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACCAGAAACCACACTCATaGACACCTAAGGCTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYQKPHS*TPKACP Trigger: TGGACAAGCCTTAGGTGTTCATGAGTGTGGTTTCTG...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGCATCTCATCGCCCAAACACACTCAAGGCATaGATTAGACAGCACAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RPGPSGTKGQAKGASHRPNTLKA*IRQHKS Trigger: ACTCTTGTGCTGTCTAATGCATGCCTTGAGTGTGTT...TGGGCGATGAGATGCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGCATCTCATCGCCCAATGTGTGTTGCAGCTTaGTGCTGTCTGATTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RPGPSGTKGQAKGASHRPMCVAA*CCLICL Trigger: AAGACAAATCAGACAGCACCAAGCTGCAACACACAT...TGGGCGATGAGATGCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CAA 90 bp | AGCCCAGCACTGGCCAAATGGTGGCACCATCATCTCCTGTTGTCCTaGGTGTCAGTAAGGCACAATCCTGACAATGTTGACAGCAATCCG | + |
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Preference number: 2 (lower is better) Translates to: SPALAKWWHHHLLLS*VSVRHNPDNVDSNP Trigger: CGGATTGCTGTCAACATTGTCAGGATTGTGCCTTACTGACACCAAGGACAACAGGAGATGATGGTGCCACCATTTGGCCAGTGCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | ATCGCCCACAGGTATACAGTAGGAGTTGGTGTTCAGGCTGCCTGGAAACATGACGGGAGTTTCTTAAGGTaGGTGTTGCCTCTTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: IAHRYTVGVGVQAAWKHDGSFLR*VLPLPS Trigger: GCTGGGAAGAGGCAACACTCACCTTAAGAAACTCCC...GTCATGTTTCCAGGCAGCCTGAACACCAACTCCTACTGTATACCTGTGGGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACTTCTGCAGGCCACAATaGCCCACCAAGTATAAAATG | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYFCRPQ*PTKYKM Trigger: CATTTTATACTTGGTGGGGCATTGTGGCCTGCAGAA...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTACACATGTATGTGTGTTGCAGCTTGGTGCTGTCTGATTTGTCTTAAAATGGCCCCAACCATCCTCTaGGCCACCCCCACCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VYTCMCVAAWCCLICLKMAPTIL*ATPTLG Trigger: GCCCAAGGTGGGGGTGGCCCAGAGGATGGTTGGGGC...CATTTTAAGACAAATCAGACAGCACCAAGCTGCAACACACATACATGTGTACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | CCGGAGATCCCTACACAGTCTGATAGGAATCCAACCGCAAGTCACAGCTCCCATTCTTTAGAGGACCCATaGCAGAGCAGTCACTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: PEIPTQSDRNPTASHSSHSLEDP*QSSHCS Trigger: ACTACAGTGACTGCTCTGCCATGGGTCCTCTAAAGA...ATGGGAGCTGTGACTTGCGGTTGGATTCCTATCAGACTGTGTAGGGATCTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACATGTGTGTTGCAGCTTaGTGCTGTCTGATTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYMCVAA*CCLICL Trigger: AAGACAAATCAGACAGCACCAAGCTGCAACACACAT...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACCAACAAGCATGCTTCTaGTTTCCACGTTCATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: RELVLTTTQVAEAVGLSYQQACF*FPRSFS Trigger: TGAGAATGAACGTGGAAACCAGAAGCATGCTTGTTG...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR TCA 90 bp | CTATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCAGAAACCACACTCATaGACACCTAAGGCTTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSSSLEPKKQSRKQADPAQKPHS*TPKACP Trigger: TGGACAAGCCTTAGGTGTTCATGAGTGTGGTTTCTG...GGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | CTATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCTGTAAACACCCACCCTaGCCTGGGAGAAAGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSSSLEPKKQSRKQADPACKHPP*PGRKFI Trigger: AATGAACTTTCTCCCAGGTCAGGGTGGGTGTTTACA...GGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCGTTGAGCATGCTCCTCACAGCTCTCAGTGGTCAGCACCACAACAAACAACCATAGAACCTAGAGACTaGCTAACCAGAAACGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PVEHAPHSSQWSAPQQTTIEPRD*LTRNVL Trigger: CAGAACGTTTCTGGTTAGGCAGTCTCTAGGTTCTAT...GGTTGTTTGTTGTGGTGCTGACCACTGAGAGCTGTGAGGAGCATGCTCAACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCAATCATGTTGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTGACACACATAGTCAGCTCTGGCCCTaGCCCTTGGTTTCCTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: ANHVVQRSCRSCLHSDTHSQLWP*PLVSCI Trigger: AATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACT...ATGTGTGTCACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAACATGATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CAA 90 bp | GTGGGCCTGTCCTACACCAGGGTAGGAGCCCCTACATCAAGCCACTaGAGACTGTTGAGCATTTTTAAAGTTCTTCCTGTCAAGTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: VGLSYTRVGAPTSSH*RLLSIFKVLPVKFH Trigger: GTGAAACTTGACAGGAAGAACTTTAAAAATGCTCAACAGTCTCAAGTGGCTTGATGTAGGGGCTCCTACCCTGGTGTAGGACAGGCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTACAGGACCAGTCCCAAGCCTTCTGCAGGCCACAATGCCCCACCAAGTATGACCAATATGAAACATaGAGTTGGGAAGAACAATCG | + |
|
Preference number: 2 (lower is better) Translates to: QLQDQSQAFCRPQCPTKYDQYET*SWEEQS Trigger: CGATTGTTCTTCCCAACTTCATGTTTCATATTGGTC...ATACTTGGTGGGGCATTGTGGCCTGCAGAAGGCTTGGGACTGGTCCTGTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAGCAGTCACTGTAGTCTaGAGGACAGGGCACAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRAVTVV*RTGHRN Trigger: GTTTCTGTGCCCTGTCCTGCAGACTACAGTGACTGC...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | CCGGAGATCCCTACACAGTCTGATAGGAATCCAACCGCAAGTCACAGCTCCCATATAGAACCTAGAGACTaGCTAACCAGAAACGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEIPTQSDRNPTASHSSHIEPRD*LTRNVL Trigger: CAGAACGTTTCTGGTTAGGCAGTCTCTAGGTTCTAT...ATGGGAGCTGTGACTTGCGGTTGGATTCCTATCAGACTGTGTAGGGATCTCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | TATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCGCATGGGAAGAAACTTaGGGAAAGGATTGGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YQAHWSQRNNPGSRQIQPAWEET*GKDWQM Trigger: CATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGC...GGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGATCTGGCCCTGGCCCTTaGTTTCCTGTATTTACCGCT | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRSGPGP*FPVFTA Trigger: AGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGA...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAGTGCTAGGAATCTGCTaGATGTGGGTCTCAAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRVLGIC*MWVSSL Trigger: GAGACTTGAGACCCACATTCAGCAGATTCCTAGCAC...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCCAGCTTGGTGCTGTCTaGTTTGTCTTAAAATGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: YQAHWSQRNNPGSRQIQPQLGAV*FVLKWV Trigger: AACCCATTTTAAGACAAATCAGACAGCACCAAGCTG...GGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTGTCACAGCTCCCATATaGTCCTTCTTTCTAATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GLCHQTGLSIKVDNPPEIVTAPI*SFFLIL Trigger: CAAGATTAGAAAGAAGGAGCATATGGGAGCTGTGAC...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | CTATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCGTCACAGCTCCCATATaGTCCTTCTTTCTAATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSSSLEPKKQSRKQADPAVTAPI*SFFLIL Trigger: CAAGATTAGAAAGAAGGAGCATATGGGAGCTGTGAC...GGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCGCCCACAGGTATACAGTAGGAGTTGGTGTTCAGGCTGCCTGGAAACATGACAACACACTCAAGGCATaGATTAGACAGCACAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: IAHRYTVGVGVQAAWKHDNTLKA*IRQHKS Trigger: ACTCTTGTGCTGTCTAATGCATGCCTTGAGTGTGTT...GTCATGTTTCCAGGCAGCCTGAACACCAACTCCTACTGTATACCTGTGGGCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTCAGACCTGGACCGTCTaGGACCAAAGGCCAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KFFLSSFTDRDLILAIGSQTWTV*DQRPSK Trigger: TTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCTG...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTGACCAATATGAAACATaGAGTTGGGAAGAACAATCG | + |
|
Preference number: 2 (lower is better) Translates to: GLCHQTGLSIKVDNPPEIDQYET*SWEEQS Trigger: CGATTGTTCTTCCCAACTTCATGTTTCATATTGGTC...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTAAGTTCATTTGTAGGTaGCTTCCAAGACCTGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GLCHQTGLSIKVDNPPEIKFICR*LPRPVN Trigger: GTTAACAGGTCTTGGAAGTCACCTACAAATGAACTT...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTGCAGTCACTGTAGTCTaGAGGACAGGGCACAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KFFLSSFTDRDLILAIGSAVTVV*RTGHRN Trigger: GTTTCTGTGCCCTGTCCTGCAGACTACAGTGACTGC...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTAGAAACGTTCTGCAGTaGTGCCCCAACCATCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KFFLSSFTDRDLILAIGSRNVLQ*CPNHPL Trigger: CAGAGGATGGTTGGGGCAGCACTGCAGAACGTTTCT...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCAATCATGTTGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTGACACACATCACATGTATGTGTGTTaGAGCTTGGTGCTGTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: ANHVVQRSCRSCLHSDTHHMYVC*SLVLSD Trigger: ATCAGACAGCACCAAGCTGCAACACACATACATGTG...ATGTGTGTCACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAACATGATTGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCAATCATGTTGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTGACACACATGCATGGGAAGAAACTTaGGGAAAGGATTGGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: ANHVVQRSCRSCLHSDTHAWEET*GKDWQM Trigger: CATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGC...ATGTGTGTCACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAACATGATTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAACAATAAGCAGCCAGTaGCATGGGAAGAAACTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRTISSQ*HGKKLG Trigger: CCCAAGTTTCTTCCCATGCCACTGGCTGCTTATTGT...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGACACAGTGACACACATTaGTTTCAGAAGTGCCGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRHSDTH*FQKCRL Trigger: CAAACGGCACTTCTGAAAGCAATGTGTGTCACTGTG...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAATCTTGCCTTCACAGTaGCACACATTGCTTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FHLSVIFPVLQLPYWILRILPSQ*HTLLSE Trigger: TTCTGAAAGCAATGTGTGTCACTGTGAAGGCAAGAT...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTAGGATCTGTAGCTCTTaGTACTTAAATAAGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: GLCHQTGLSIKVDNPPEIRICSS*YLNKIM Trigger: CATGATCTTATTTAAGTAGCAAGAGCTACAGATCCT...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | TATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCAGGATCTGTAGCTCTTaGTACTTAAATAAGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: YQAHWSQRNNPGSRQIQPRICSS*YLNKIM Trigger: CATGATCTTATTTAAGTAGCAAGAGCTACAGATCCT...GGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTTTCTGCAGGCCACAATaGCCCACCAAGTATAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: KFFLSSFTDRDLILAIGSFCRPQ*PTKYKM Trigger: CATTTTATACTTGGTGGGGCATTGTGGCCTGCAGAA...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTTGGAACCAGTGCTATTaGGAAAACAGTTTAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KFFLSSFTDRDLILAIGSWNQCY*ENSLTR Trigger: TCTTGTTAAACTGTTTTCTCAATAGCACTGGTTCCA...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGCTCTGGCCCTGGCCCTaGGTTTCCTGTATTTACCGC | + |
|
Preference number: 3 (lower is better) Translates to: SPAPGMKLYEQEADGPLRLWPWP*VSCIYR Trigger: GCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAG...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGTGGGGTTTGAGGGCTTaGCCATCAGACAGGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPAPGMKLYEQEADGPLRWGLRA*PSDRPQ Trigger: CTGAGGCCTGTCTGATGGCAAAGCCCTCAAACCCCA...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR GCA 72 bp | CCTAGAGACTGCCTAACCAGAAACGTTCTGCAGTGCTaGCCCAACCATCCTCTGGGCCACCCCCACCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PRDCLTRNVLQC*PNHPLGHPHLG Trigger: CCCAAGGTGGGGGTGGCCCAGAGGATGGTTGGGGCAGCACTGCAGAACGTTTCTGGTTAGGCAGTCTCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | CCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGACCTaGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSAPASLLDPQT*TVWDQRPSKGG Trigger: GCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCTGAGGATCCAATAGGGAAGCTGGAGCACTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACTCATGGCCGTGGGGTTaGAGGGCTTTGCCATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RELVLTTTQVAEAVGLSYSWPWG*RALPSD Trigger: GTCTGATGGCAAAGCCCTCAAACCCCACGGCCATGA...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGCATCTCATCGCCCAAACTTGGGGAAAGGATaGGCAAATGAAATCCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RPGPSGTKGQAKGASHRPNLGKG*ANEIRS Trigger: GCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTT...TGGGCGATGAGATGCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCGCCCACAGGTATACAGTAGGAGTTGGTGTTCAGGCTGCCTGGAAACATGACCTCTGGCCCTGGCCCTaGGTTTCCTGTATTTACCGC | + |
|
Preference number: 3 (lower is better) Translates to: IAHRYTVGVGVQAAWKHDLWPWP*VSCIYR Trigger: GCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAG...GTCATGTTTCCAGGCAGCCTGAACACCAACTCCTACTGTATACCTGTGGGCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACATGGGGCCAATCATGTaGTCCAGAGGAGCTGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RELVLTTTQVAEAVGLSYMGPIM*SRGAVD Trigger: ATCTACAGCTCCTCTGGACAACATGATTGGCCCCAT...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | CAGATGCCCGTTGAGCATGCTCCTCACAGCTCTCAGTaGTCAGCACCACAACAAACAACCCACTACAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QMPVEHAPHSSQ*SAPQQTTHYSM Trigger: CATGCTGTAGTGGGTTGTTTGTTGTGGTGCTGACCACTGAGAGCTGTGAGGAGCATGCTCAACGGGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | CTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTaGATCCTCAGACCTGGACCGTCTGGGACCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSVIFPVLQLPY*ILRPGPSGTKG Trigger: GCCTTTGGTCCCAGACGGTCCAGGTCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | TGGCATGGGAAGAAACTTGGGGAAAGGATTGGCAAATaGAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WHGKKLGERIGK*NPELGHKRWLP Trigger: AGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | TACAGTAGGAGTTGGTGTTCAGGCTGCCTGGAAACATaGCACCACCAGCAGCCCTCCACCAAGAATAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YSRSWCSGCLET*HHQQPSTKNSL Trigger: AAGACTATTCTTGGTGGAGGGCTGCTGGTGGTGTCATGTTTCCAGGCAGCCTGAACACCAACTCCTACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCAACTTGGGGAAAGGATaGGCAAATGAAATCCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YQAHWSQRNNPGSRQIQPNLGKG*ANEIRS Trigger: GCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTT...GGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCGGCATGGGAAGAAACTaGGGGAAAGGATTGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSSSLEPKKQSRKQADPAGMGRN*GKGLAN Trigger: ATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGCC...GGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | CACTACAATAAGCAGCCAGTGGCATGGGAAGAAACTTaGGGAAAGGATTGGCAAATGAAATCCGGAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HYNKQPVAWEET*GKDWQMKSGAG Trigger: CCCAGCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGCCACTGGCTGCTTATTGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGAACCAAGTCTCTTTAGAGGACCCATGGCAGAGCAGTCACTGTAGTCTGAACTTGGGGAAAGGATaGGCAAATGAAATCCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQNQVSLEDPWQSSHCSLNLGKG*ANEIRS Trigger: GCTCCGGATTTCATTTGCCAATCCTTTCCCCAAGTT...CAGACTACAGTGACTGCTCTGCCATGGGTCCTCTAAAGAGACTTGGTTCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGCTGAATCCAGCTGTCTCCATCACCCAGAAACTTTCACTGCTGGTGCTAGGCATGGGAAGAAACTaGGGGAAAGGATTGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRLNPAVSITQKLSLLVLGMGRN*GKGLAN Trigger: ATTTGCCAATCCTTTCCCCAAGTTTCTTCCCATGCC...TAGCACCAGCAGTGAAAGTTTCTGGGTGATGGAGACAGCTGGATTCAGCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCGCCCACAGGTATACAGTAGGAGTTGGTGTTCAGGCTGCCTGGAAACATGACTATGTGTGTTGCAGCTaGGTGCTGTCTGATTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IAHRYTVGVGVQAAWKHDYVCCS*VLSDLS Trigger: AGACAAATCAGACAGCACCAAGCTGCAACACACATA...GTCATGTTTCCAGGCAGCCTGAACACCAACTCCTACTGTATACCTGTGGGCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | ACCCAGAAACTTTCACTGCTGGTGCTAGGAATCTGCTaGATGTGGGTCTCAAGTCTCAGAACCAAGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TQKLSLLVLGIC*MWVSSLRTKSL Trigger: AAGAGACTTGGTTCTGAGACTTGAGACCCACATTCAGCAGATTCCTAGCACCAGCAGTGAAAGTTTCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCTTCCTGTCAAGTTTCACTGATCGAGATCTGATCTTGGCAATTGGCTCTACAATCCTGACAATGTaGACAGCAATCCGACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KFFLSSFTDRDLILAIGSTILTM*TAIRPA Trigger: TGCTGGTCGGATTGCTGTCAACATTGTCAGGATTGT...AGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR GCA 72 bp | TCTTGCCTTCACAGTGACACACATTGCTTTCAGAAGTaGCGTTTGACGTGGCAAACTATTAGTTCATATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SCLHSDTHCFQK*RLTWQTISSYG Trigger: CCCATATGAACTAATAGTTTGCCACGTCAAACGGCACTTCTGAAAGCAATGTGTGTCACTGTGAAGGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | AAAATCACTGAAGAGCCTTCACCTGGACAAGCTCTCTaGAAGCTGACCAATATGAAACATGAAGTTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KITEEPSPGQAL*KLTNMKHEVGK Trigger: CTTCCCAACTTCATGTTTCATATTGGTCAGCTTCCAGAGAGCTTGTCCAGGTGAAGGCTCTTCAGTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | AGTGACACACATTGCTTTCAGAAGTGCCGTTTGACGTaGCAAACTATTAGTTCATATGGGGTGGAAACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SDTHCFQKCRLT*QTISSYGVETS Trigger: GCTAGTTTCCACCCCATATGAACTAATAGTTTGCCACGTCAAACGGCACTTCTGAAAGCAATGTGTGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR GCA 72 bp | CCCTTTCCCCATCCACTTCTAATAAAACAACAAGCATaGTTCTGGTTTCCACGTTCATTCTCAGGATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PFPHPLLIKQQA*FWFPRSFSGSV Trigger: TACAGATCCTGAGAATGAACGTGGAAACCAGAAGCATGCTTGTTGTTTTATTAGAAGTGGATGGGGAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | CCCCATCCACTTCTAATAAAACAACAAGCATGCTTCTaGTTTCCACGTTCATTCTCAGGATCTGTAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PHPLLIKQQACF*FPRSFSGSVAL Trigger: AAGAGCTACAGATCCTGAGAATGAACGTGGAAACCAGAAGCATGCTTGTTGTTTTATTAGAAGTGGATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | TGTACACATGTATGTGTGTTGCAGCTTGGTGCTGTCTaGTTTGTCTTAAAATGGGTTCCATATGCACCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTHVCVLQLGAV*FVLKWVPYAPD Trigger: ATCTGGTGCATATGGAACCCATTTTAAGACAAATCAGACAGCACCAAGCTGCAACACACATACATGTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | AGTGTGTGTGTGTACACATGTATGTGTGTTGCAGCTTaGTGCTGTCTGATTTGTCTTAAAATGGGTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SVCVYTCMCVAA*CCLICLKMGSI Trigger: TATGGAACCCATTTTAAGACAAATCAGACAGCACCAAGCTGCAACACACATACATGTGTACACACACACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | ATGCTCCTTCTTTCTAATCTTGGGGTAAGACTATTGTaGGACCATGTTTGCACTAAAATCACTGAAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MLLLSNLGVRLL*DHVCTKITEEP Trigger: AGGCTCTTCAGTGATTTTAGTGCAAACATGGTCTCACAATAGTCTTACCCCAAGATTAGAAAGAAGGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR TCA 72 bp | TTGAGCATTTTTAAAGTTCTTCCTGTCAAGTTTCACTaGTCGAGATCTGATCTTGGCAATTGGCTCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSIFKVLPVKFH*SRSDLGNWLFC Trigger: GCAGAAGAGCCAATTGCCAAGATCAGATCTCGATCAGTGAAACTTGACAGGAAGAACTTTAAAAATGCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CCA 72 bp | TTTAATGCAAACACTAGACCATTTACAATTCACACTTaGACACAAGCACGTAAAACGATGTACAGGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: FNANTRPFTIHT*TQARKTMYRDS Trigger: AGAATCCCTGTACATCGTTTTACGTGCTTGTGTCCAAGTGTGAATTGTAAATGGTCTAGTGTTTGCATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCGGCCCCTGGGATGAAACTGTATGAACAGGAGGCCGATGGCCCGCTCAGGTCTCCATATCCTCTCTaGACAAGGGTGGCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPGMKLYEQEADGPLRSPYPL*TRVAKE Trigger: CTCCTTGGCCACCCTTGTCCAGAGAGGATATGGAGA...CCTGAGCGGGCCATCGGCCTCCTGTTCATACAGTTTCATCCCAGGGGCCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGGACCGTCTGGGACCAAAGGCCAAGCAAAGGGGGCATCTCATCGCCCACCCCTTCACGTAGTCTaGATTGAGGCCCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPGPSGTKGQAKGASHRPPLHVV*IEALLN Trigger: ATTCAGCAGGGCCTCAATGCAGACTACGTGAAGGGG...TGGGCGATGAGATGCCCCCTTTGCTTGGCCTTTGGTCCCAGACGGTCCAGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTACAGGACCAGTCCCAAGCCTTCTGCAGGCCACAATGCCCCACCAAGTATTCTCCATATCCTCTCTaGACAAGGGTGGCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLQDQSQAFCRPQCPTKYSPYPL*TRVAKE Trigger: CTCCTTGGCCACCCTTGTCCAGAGAGGATATGGAGA...ATACTTGGTGGGGCATTGTGGCCTGCAGAAGGCTTGGGACTGGTCCTGTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTGGTACTAACCACGACCCAAGTGGCTGAGGCAGTGGGCCTGTCCTACGTAGTAGTGGCAACATaGTCCCATCTCTCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RELVLTTTQVAEAVGLSYVVVAT*SHLSAG Trigger: TCCAGCAGAGAGATGGGACCATGTTGCCACTACTAC...GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037391.12 |
||
| CDS-3UTR CCA 90 bp | GCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGTCCCATCTCTCTCTCTaGACAAGGGTGGCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANEIRSWVTSGGFLQMYLSHLSL*TRVAKE Trigger: CTCCTTGGCCACCCTTGTCCAGAGAGAGAGATGGGA...CAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | CAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCGTCGTGGTGCTGAAGTaGTCCCATCTCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QMKSGAGSQAVASFRCTCVVVLK*SHLSLW Trigger: CCAGAGAGAGAGATGGGACCACTTCAGCACCACGAC...GCAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | CCGGAGATCCCTACACAGTCTGATAGGAATCCAACCGCAAGTCACAGCTCCCATTCTCCATATCCTCTCTaGACAAGGGTGGCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEIPTQSDRNPTASHSSHSPYPL*TRVAKE Trigger: CTCCTTGGCCACCCTTGTCCAGAGAGGATATGGAGA...ATGGGAGCTGTGACTTGCGGTTGGATTCCTATCAGACTGTGTAGGGATCTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACGTCCCATCTCTCTGCTaGATTTGCTGGGGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LANEIRSWVTSGGFLQMYVPSLC*ICWGSG Trigger: ACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGAC...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | CCCGTTGAGCATGCTCCTCACAGCTCTCAGTGGTCAGCACCACAACAAACAACCGGTAGGAGATGTAGCTaGATACAGCTCCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVEHAPHSSQWSAPQQTTGRRCS*IQLQSG Trigger: CCCTGATTGGAGCTGTATCCAGCTACATCTCCTACC...GGTTGTTTGTTGTGGTGCTGACCACTGAGAGCTGTGAGGAGCATGCTCAACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CAA 72 bp | CAAACTAGGGGTAGCAGTCAGCTCTGGCCCTGGCCCTaGGTTTCCTGTATTTACCGCTATGAACATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTRGSSQLWPWP*VSCIYRYEHGQ Trigger: CTGACCATGTTCATAGCGGTAAATACAGGAAACCAAGGGCCAGGGCCAGAGCTGACTGCTACCCCTAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | TATCAAGCTCACTGGAGCCAAAGAAACAATCCAGGAAGCAGGCAGATCCAGCCCACCTCCTGCTTCTCCTaGACTTGGCTTTTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YQAHWSQRNNPGSRQIQPTSCFS*TWLFGT Trigger: GGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGT...GGGCTGGATCTGCCTGCTTCCTGGATTGTTTCTTTGGCTCCAGTGAGCTTGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTCCTGCTTCTCCTaGACTTGGCTTTTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DWQMKSGAGSQAVASFRCTSCFS*TWLFGT Trigger: GGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGT...ACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR GCA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACACCTCCTGCTTCTCCTaGACTTGGCTTTTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LANEIRSWVTSGGFLQMYTSCFS*TWLFGT Trigger: GGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGT...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTCCCCTTCACGTAGTCTaGATTGAGGCCCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLCHQTGLSIKVDNPPEIPLHVV*IEALLN Trigger: ATTCAGCAGGGCCTCAATGCAGACTACGTGAAGGGG...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCCCCTTCACGTAGTCTaGATTGAGGCCCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LANEIRSWVTSGGFLQMYPLHVV*IEALLN Trigger: ATTCAGCAGGGCCTCAATGCAGACTACGTGAAGGGG...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTCCCCTTCACGTAGTCTaGATTGAGGCCCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DWQMKSGAGSQAVASFRCPLHVV*IEALLN Trigger: ATTCAGCAGGGCCTCAATGCAGACTACGTGAAGGGG...ACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAACCAAGTCTCTTTAGAGGACCCATGGCAGAGCAGTCACTGTAGTCTGGTCCCATCTCTCTGCTaGATTTGCTGGGGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQNQVSLEDPWQSSHCSLVPSLC*ICWGSG Trigger: ACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGAC...CAGACTACAGTGACTGCTCTGCCATGGGTCCTCTAAAGAGACTTGGTTCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037391.12 |
||
| CDS-3UTR CCA 90 bp | CAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCGTAGTAGTGGCAACATaGTCCCATCTCTCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMKSGAGSQAVASFRCTCVVVAT*SHLSAG Trigger: TCCAGCAGAGAGATGGGACCATGTTGCCACTACTAC...GCAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | CAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCGGTAGGAGATGTAGCTaGATACAGCTCCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMKSGAGSQAVASFRCTCGRRCS*IQLQSG Trigger: CCCTGATTGGAGCTGTATCCAGCTACATCTCCTACC...GCAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR TCA 90 bp | CAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCCTGCGTTTCTTGTTTTaGGTATGTCACTTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QMKSGAGSQAVASFRCTCLRFLF*VCHLGL Trigger: GAGCCCCAAGTGACATACTCAAAACAAGAAACGCAG...GCAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | GAACATGGTCAGAGCCCTTTTCAGAGCAGACAGGGAGGACAGCTACACAACTACGGTAGGAGATGTAGCTaGATACAGCTCCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHGQSPFQSRQGGQLHNYGRRCS*IQLQSG Trigger: CCCTGATTGGAGCTGTATCCAGCTACATCTCCTACC...GTAGTTGTGTAGCTGTCCTCCCTGTCTGCTCTGAAAAGGGCTCTGACCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | GCTATGAACATGGTCAGAGCCCTTTTCAGAGCAGACAGGGAGGACAGCTACACAGGTAGGAGATGTAGCTaGATACAGCTCCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMNMVRALFRADREDSYTGRRCS*IQLQSG Trigger: CCCTGATTGGAGCTGTATCCAGCTACATCTCCTACC...TGTGTAGCTGTCCTCCCTGTCTGCTCTGAAAAGGGCTCTGACCATGTTCATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCGTTTCTTGTTTTaGGTATGTCACTTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LANEIRSWVTSGGFLQMYLRFLF*VCHLGL Trigger: GAGCCCCAAGTGACATACTCAAAACAAGAAACGCAG...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTCTGCGTTTCTTGTTTTaGGTATGTCACTTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHQTGLSIKVDNPPEILRFLF*VCHLGL Trigger: GAGCCCCAAGTGACATACTCAAAACAAGAAACGCAG...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | GCCAATCATGTTGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTGACACACATACCTCCTGCTTCTCCTaGACTTGGCTTTTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ANHVVQRSCRSCLHSDTHTSCFS*TWLFGT Trigger: GGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGT...ATGTGTGTCACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAACATGATTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | CAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCGGGGGTTCTGCAGACTaGGTTTCTTGTTTTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QMKSGAGSQAVASFRCTCGGSAD*VSCFEY Trigger: ATACTCAAAACAAGAAACGCAGTCTGCAGAACCCCC...GCAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | GCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGGTAGTAGTGGCAACATaGTCCCATCTCTGCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ANEIRSWVTSGGFLQMYLVVVAT*SHLCFT Trigger: AGTAAAGCAGAGATGGGACCATGTTGCCACTACTAC...CAGGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080035.11 |
||
| 3UTR CAA 72 bp | CTGGCCAAATGGTGGCACCATCATCTCCTGTTGTCCTaGGTGTCAGTAAGGCACAATCCTGACAATGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAKWWHHHLLLS*VSVRHNPDNVD Trigger: GTCAACATTGTCAGGATTGTGCCTTACTGACACCAAGGACAACAGGAGATGATGGTGCCACCATTTGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGAACCAAGTCTCTTTAGAGGACCCATGGCAGAGCAGTCACTGTAGTCTGCTGCGTTTCTTGTTTTaGGTATGTCACTTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQNQVSLEDPWQSSHCSLLRFLF*VCHLGL Trigger: GAGCCCCAAGTGACATACTCAAAACAAGAAACGCAG...CAGACTACAGTGACTGCTCTGCCATGGGTCCTCTAAAGAGACTTGGTTCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGTCAGAGCCCTTTTCAGAGCAGACAGGGAGGACAGCTACACAACTACGGGGGTTCTGCAGACTaGGTTTCTTGTTTTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EHGQSPFQSRQGGQLHNYGGSAD*VSCFEY Trigger: ATACTCAAAACAAGAAACGCAGTCTGCAGAACCCCC...GTAGTTGTGTAGCTGTCCTCCCTGTCTGCTCTGAAAAGGGCTCTGACCATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGGCTGAATCCAGCTGTCTCCATCACCCAGAAACTTTCACTGCTGGTGCTAGGGGGTTCTGCAGACTaGGTTTCTTGTTTTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLNPAVSITQKLSLLVLGGSAD*VSCFEY Trigger: ATACTCAAAACAAGAAACGCAGTCTGCAGAACCCCC...TAGCACCAGCAGTGAAAGTTTCTGGGTGATGGAGACAGCTGGATTCAGCCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCTGCACTTGGCTTTTTaGGACCATCTAGATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LANEIRSWVTSGGFLQMYLHLAF*DHLDHF Trigger: GAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAG...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS-3UTR CCA 90 bp | GCTATGAACATGGTCAGAGCCCTTTTCAGAGCAGACAGGGAGGACAGCTACACACTGCACTTGGCTTTTTaGGACCATCTAGATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AMNMVRALFRADREDSYTLHLAF*DHLDHF Trigger: GAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAG...TGTGTAGCTGTCCTCCCTGTCTGCTCTGAAAAGGGCTCTGACCATGTTCATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTTTGCCATCAGACAGGCCTCAGCATAAAGGTAGACAACCCTCCTGAGATTCTGCACTTGGCTTTTTaGGACCATCTAGATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHQTGLSIKVDNPPEILHLAF*DHLDHF Trigger: GAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAG...AATCTCAGGAGGGTTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAACCAAGTCTCTTTAGAGGACCCATGGCAGAGCAGTCACTGTAGTCTGAAGTGGTCCCATCTCTaGTTTACTGAGGAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQNQVSLEDPWQSSHCSLKWSHL*FTEEVS Trigger: AGAAACTTCCTCAGTAAAGCAGAGATGGGACCACTT...CAGACTACAGTGACTGCTCTGCCATGGGTCCTCTAAAGAGACTTGGTTCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037391.12 |
||
| 3UTR CAA 72 bp | TCCTACACCAGGGTAGGAGCCCCTACATCAAGCCACTaGAGACTGTTGAGCATTTTTAAAGTTCTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SYTRVGAPTSSH*RLLSIFKVLPV Trigger: GACAGGAAGAACTTTAAAAATGCTCAACAGTCTCAAGTGGCTTGATGTAGGGGCTCCTACCCTGGTGTAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CAA 72 bp | AATTCACAGCTTATGGGATATATGGGGCCAATCATGTaGTCCAGAGGAGCTGTAGATCTTGCCTTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSQLMGYMGPIM*SRGAVDLAFTV Trigger: CACTGTGAAGGCAAGATCTACAGCTCCTCTGGACAACATGATTGGCCCCATATATCCCATAAGCTGTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CAA 72 bp | ATTTATTTTACATCATGGCCGTGGGGTTTGAGGGCTTaGCCATCAGACAGGCCTCAGCATAAAGGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: IYFTSWPWGLRA*PSDRPQHKGRQ Trigger: TTGTCTACCTTTATGCTGAGGCCTGTCTGATGGCAAAGCCCTCAAACCCCACGGCCATGATGTAAAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAACATGGTCCCATCTCTaGTTTACTGAGGAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLSVIFPVLQLPYWILRTWSHL*FTEEVS Trigger: AGAAACTTCCTCAGTAAAGCAGAGATGGGACCATGT...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080035.11 |
||
| 3UTR CAA 72 bp | TCTAGAAACGGACACATCTTGCAAGTGATGCCTTCTTaGCTTATTAACCTCCTGAAGAATAAGGCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRNGHILQVMPS*LINLLKNKAGF Trigger: GAAGCCCGCCTTATTCTTCAGGAGGTTAATAAGCAAAGAAGGCATCACTTGCAAGATGTGTCCGTTTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
||
| 3UTR CAA 72 bp | AGGGTAGGAGCCCCTACATCAAGCCACTTGAGACTGTaGAGCATTTTTAAAGTTCTTCCTGTCAAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVGAPTSSHLRL*SIFKVLPVKFH Trigger: GTGAAACTTGACAGGAAGAACTTTAAAAATGCTCAACAGTCTCAAGTGGCTTGATGTAGGGGCTCCTACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| 3UTR CAA 72 bp | ACCAGCAAGTTAAGAGGTTCTAGAAACGGACACATCTaGCAAGTGATGCCTTCTTTGCTTATTAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKLRGSRNGHI*QVMPSLLINLL Trigger: CAGGAGGTTAATAAGCAAAGAAGGCATCACTTGCAAGATGTGTCCGTTTCTAGAACCTCTTAACTTGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| CDS CCA 90 bp | ACTGGCCTCCTAGTCGTGGTGCTGAAGTGGTCCCATCTCTCTCTCTaGACAAGGGTGGCCAAGGAGAAAACGAGGCAAACGAGGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLVVVLKWSHLSL*TRVAKEKTRQTRKA Trigger: GGCTTTCCTCGTTTGCCTCGTTTTCTCCTTGGCCACCCTTGTCCAGAGAGAGAGATGGGACCACTTCAGCACCACGACTAGGAGGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114587.3 |
||
| CDS GCA 90 bp | GGATACAGCTCCAATCAGGGCCATAGCAAGGGCACTGGCCACACCTaGAATGGTGCCAGTTTCTGTCGATATGCCAGATCCAGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GYSSNQGHSKGTGHT*NGASFCRYARSRVI Trigger: GATGACCCTGGATCTGGCATATCGACAGAAACTGGCACCATTGCAGGTGTGGCCAGTGCCCTTGCTATGGCCCTGATTGGAGCTGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CCA 90 bp | ATGGTCCCATCTCTCTGCTGGATTTGCTGGGGCTCTGGTTGTTACTaGCCTCCTAGTCGTGGTGCTGAAGTGGTCCCATCTCTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MVPSLCWICWGSGCY*PPSRGAEVVPSLSL Trigger: CAGAGAGAGAGATGGGACCACTTCAGCACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114587.3 |
||
| CDS CCA 90 bp | ATGGTCCCATCTCTCTGCTGGATTTGCTGGGGCTCTGGTTGTTACTaGCCTCCTAGTCGTGGTGCTGAAGTGGTCCCATCTCTGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: MVPSLCWICWGSGCY*PPSRGAEVVPSLLY Trigger: GTAAAGCAGAGATGGGACCACTTCAGCACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037391.12 |
||
| CDS GCA 90 bp | TCCTGGCCTTCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTaGTGGATTTGCTGGGGCTCTGGTTGTTACTGGCCTCCTAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SWPSSCSSGNMVPSL*WICWGSGCYWPPSR Trigger: ACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGAAGGCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS CCA 90 bp | AGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTGCTGGATTTGCTaGGGCTCTGGTTGTTACTGGCCTCCTAGTCGTGGTGCTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSSGNMVPSLCWIC*GSGCYWPPSRGAEV Trigger: CACTTCAGCACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS CCA 90 bp | TGGCCTTCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTGCTaGATTTGCTGGGGCTCTGGTTGTTACTGGCCTCCTAGTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WPSSCSSGNMVPSLC*ICWGSGCYWPPSRG Trigger: ACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS GCA 90 bp | TCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTGCTGGATTTaGTGGGGCTCTGGTTGTTACTGGCCTCCTAGTCGTGGTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSSGNMVPSLCWI*WGSGCYWPPSRGAE Trigger: TTCAGCACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS-3UTR CAA 90 bp | CCCGTTGAGCATGCTCCTCACAGCTCTCAGTGGTCAGCACCACAACAAACAACCATGTCTTCAAGATCCTaGTCTGACCAACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVEHAPHSSQWSAPQQTTMSSRS*SDQPPA Trigger: AGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACAT...GGTTGTTTGTTGTGGTGCTGACCACTGAGAGCTGTGAGGAGCATGCTCAACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| CDS TCA 90 bp | AGGTTTGTATCCCCCACCTTCCACGATGTCTTCAAGATCCTTGTCTaGCCAACCTCCTGCTTCTCCTGCACTTGGCTTTTTGGGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: RFVSPTFHDVFKILV*PTSCFSCTWLFGTI Trigger: GATGGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACATCGTGGAAGGTGGGGGATACAAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CCA 90 bp | GGTGCTCTAGTTGTTCCTGGCCTTCTAGTTGTAGTAGTGGCAACATaGTCCCATCTCTCTGCTGGATTTGCTGGGGCTCTGGTTGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: GALVVPGLLVVVVAT*SHLSAGFAGALVVT Trigger: AGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGAAGGCCAGGAACAACTAGAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS-3UTR CAA 90 bp | TGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACCATGTCTTCAAGATCCTaGTCTGACCAACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WQMKSGAGSQAVASFRCTMSSRS*SDQPPA Trigger: AGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACAT...GGTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS-3UTR CAA 90 bp | TTGGCAAATGAAATCCGGAGCTGGGTCACAAGCGGTGGCTTCCTTCAGATGTACATGTCTTCAAGATCCTaGTCTGACCAACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LANEIRSWVTSGGFLQMYMSSRS*SDQPPA Trigger: AGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACAT...GTACATCTGAAGGAAGCCACCGCTTGTGACCCAGCTCCGGATTTCATTTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CCA 90 bp | GATCCTTGTCTGACCAACCTCCTGCTTCTCCTGCACTTGGCTTTTTaGGACCATCTAGATCATTTCGATCATCCAAGGCATCTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DPCLTNLLLLLHLAF*DHLDHFDHPRHLPS Trigger: ACTTGGAAGATGCCTTGGATGATCGAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGACAAGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS-3UTR CAA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGACCACCGCCTTTATTCTaGTCAGGTTTGTATCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHLSVIFPVLQLPYWILRPPPLF*SGLYPP Trigger: TGGGGGATACAAACCTGACAAGAATAAAGGCGGTGG...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| CDS-3UTR CAA 90 bp | TTCCATCTTAGTGTCATTTTCCCAGTGCTCCAGCTTCCCTATTGGATCCTCAGAATGTCTTCAAGATCCTaGTCTGACCAACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FHLSVIFPVLQLPYWILRMSSRS*SDQPPA Trigger: AGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACAT...TCTGAGGATCCAATAGGGAAGCTGGAGCACTGGGAAAATGACACTAAGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 |
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| CDS GCA 90 bp | GTTCCTGGCCTTCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTaGTTTACTGAGGAAGTTTCTTTCAGTGCATCCTCCAGATTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPGLLVVVVATWSHL*FTEEVSFSASSRLK Trigger: TTTTAATCTGGAGGATGCACTGAAAGAAACTTCCTCAGTAAAGCAGAGATGGGACCATGTTGCCACTACTACAACTAGAAGGCCAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080035.11 |
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| CDS CCA 72 bp | TCTCTCTGCTGGATTTGCTGGGGCTCTGGTTGTTACTaGCCTCCTAGTCGTGGTGCTGAAGTGGTCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLCWICWGSGCY*PPSRGAEVVPS Trigger: AGATGGGACCACTTCAGCACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
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| CDS CCA 72 bp | AGTGGCAACATGGTCCCATCTCTCTGCTGGATTTGCTaGGGCTCTGGTTGTTACTGGCCTCCTAGTCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGNMVPSLCWIC*GSGCYWPPSRG Trigger: ACCACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS GCA 72 bp | AGTAGTGGCAACATGGTCCCATCTCTCTGCTGGATTTaGTGGGGCTCTGGTTGTTACTGGCCTCCTAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSGNMVPSLCWI*WGSGCYWPPSR Trigger: ACGACTAGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS GCA 72 bp | GGCCTCCTAGTCGTGGTGCTGAAGTGGTCCCATCTCTaGTTTACTGAGGAAGTTTCTTTCAGTGCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLVVVLKWSHL*FTEEVSFSASS Trigger: GGAGGATGCACTGAAAGAAACTTCCTCAGTAAAGCAGAGATGGGACCACTTCAGCACCACGACTAGGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037391.12 |
||
| CDS CCA 72 bp | AGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTGCTaGATTTGCTGGGGCTCTGGTTGTTACTGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSSGNMVPSLC*ICWGSGCYWPP Trigger: AGGAGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS CCA 72 bp | GTTGTTCCTGGCCTTCTAGTTGTAGTAGTGGCAACATaGTCCCATCTCTCTGCTGGATTTGCTGGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVPGLLVVVVAT*SHLSAGFAGAL Trigger: CAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGAAGGCCAGGAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS TCA 72 bp | TCCCCCACCTTCCACGATGTCTTCAAGATCCTTGTCTaGCCAACCTCCTGCTTCTCCTGCACTTGGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPTFHDVFKILV*PTSCFSCTWLF Trigger: AAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACATCGTGGAAGGTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS GCA 72 bp | TCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTCTaGTGGATTTGCTGGGGCTCTGGTTGTTACTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSSGNMVPSL*WICWGSGCYWP Trigger: AGGCCAGTAACAACCAGAGCCCCAGCAAATCCAGCAGAGAGATGGGACCATGTTGCCACTACTACAACTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037391.12 ENSMUST00000114587.3 |
||
| CDS GCA 72 bp | CACAACAGCTTCCAGGTTCTCCCCCTTCACGTAGTCTaGATTGAGGCCCTGCTGAATGCTGAAGCAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: HNSFQVLPLHVV*IEALLNAEAKL Trigger: AAGTTTTGCTTCAGCATTCAGCAGGGCCTCAATGCAGACTACGTGAAGGGGGAGAACCTGGAAGCTGTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS CAA 90 bp | TTGTCAGGTTTGTATCCCCCACCTTCCACGATGTCTTCAAGATCCTaGTCTGACCAACCTCCTGCTTCTCCTGCACTTGGCTTTTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSGLYPPPSTMSSRS*SDQPPASPALGFLG Trigger: TCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGACAAGGATCTTGAAGACATCGTGGAAGGTGGGGGATACAAACCTGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
||
| CDS GCA 72 bp | CAGTTTCTGTCGATATGCCAGATCCAGGGTCATCGTTaGTGCCATAACCACCACCGCCTTTATTCTTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QFLSICQIQGHR*CHNHHRLYSCQ Trigger: CTGACAAGAATAAAGGCGGTGGTGGTTATGGCAGCAACGATGACCCTGGATCTGGCATATCGACAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS GCA 72 bp | TTTCTGTCGATATGCCAGATCCAGGGTCATCGTTGCTaGCATAACCACCACCGCCTTTATTCTTGTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLSICQIQGHRC*HNHHRLYSCQV Trigger: AACCTGACAAGAATAAAGGCGGTGGTGGTTATGGCAGCAACGATGACCCTGGATCTGGCATATCGACAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CCA 72 bp | CTGACCAACCTCCTGCTTCTCCTGCACTTGGCTTTTTaGGACCATCTAGATCATTTCGATCATCCAAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LTNLLLLLHLAF*DHLDHFDHPRH Trigger: ATGCCTTGGATGATCGAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CAA 72 bp | TCTGACCAACCTCCTGCTTCTCCTGCACTTGGCTTTTaGGGACCATCTAGATCATTTCGATCATCCAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SDQPPASPALGF*GPSRSFRSSKA Trigger: TGCCTTGGATGATCGAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS CAA 90 bp | AGATCCTTGTCTGACCAACCTCCTGCTTCTCCTGCACTTGGCTTTTaGGGACCATCTAGATCATTTCGATCATCCAAGGCATCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSLSDQPPASPALGF*GPSRSFRSSKASSK Trigger: CTTGGAAGATGCCTTGGATGATCGAAATGATCTAGATGGTCCCAAAAAGCCAAGTGCAGGAGAAGCAGGAGGTTGGTCAGACAAGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037391.12 ENSMUST00000080035.11 ENSMUST00000114586.9 ENSMUST00000114587.3 |
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| CDS GCA 72 bp | CTTCTAGTTGTAGTAGTGGCAACATGGTCCCATCTCTaGTTTACTGAGGAAGTTTCTTTCAGTGCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLVVVVATWSHL*FTEEVSFSASS Trigger: GGAGGATGCACTGAAAGAAACTTCCTCAGTAAAGCAGAGATGGGACCATGTTGCCACTACTACAACTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080035.11 |
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