Pregenerated sensors for CD96 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022657Ensembl transcript IDs: ENSMUST00000023336.10
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTaGGCTGAAGCAGAGGCACGCCTGGCTGGTGATGATATTAATATT | + |
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Preference number: 1 (lower is better) Translates to: GQYAGNRSHLFPTFI*AEAEARLAGDDINI Trigger: AATATTAATATCATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| 3UTR TCA 72 bp | GCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTaGGCTGAAGCAGAGGCACGCCTGGCTGGTGATGAT | + |
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Preference number: 3 (lower is better) Translates to: AGNRSHLFPTFI*AEAEARLAGDD Trigger: ATCATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAATGACTTCTATTCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | AATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAAAGTCCTGCCATCGTCTTaGATTTGGACTGGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NISLPTGLQHCFAVTRLKVLPSS*IWTGER Trigger: CCTCTCCCCAGTCCAAATCCAAGACGATGGCAGGAC...TTTGAGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGGGCGTCCAAAGGGGCTaGAGTGTGTACTTCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: IYFQHSFELKQRHAWLVMGVQRG*SVYFTG Trigger: CCCAGTGAAGTACACACTTCAGCCCCTTTGGACGCC...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | AATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAAAAGGACCTCCATCTCATaGCAACACAGGTCGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: NISLPTGLQHCFAVTRLKRTSIS*QHRSHP Trigger: TGGATGCGACCTGTGTTGTCATGAGATGGAGGTCCT...TTTGAGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAAAAGTGGTGGCTTGAAAGGTaGGGGTCTCTCCATGATTTC | + |
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Preference number: 4 (lower is better) Translates to: YLPSYRTPALLRCDKAQKWWLER*GSLHDF Trigger: GAAATCATGGAGAGACCCCCACCTTTCAAGCCACCA...CTTTTGAGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTGAATTGTTGACGTGGTaGTGGTGGGTGAAGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: VQYLPSYRTPALLRCDKAELLTW*WWVKRT Trigger: AGTTCTCTTCACCCACCATCACCACGTCAACAATTC...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATGAGGTGGTGGTGGCTTaGAAGGTGGGGGTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFTSQVFADERGQYAGNEVVVA*KVGVSP Trigger: TGGAGAGACCCCCACCTTTCAAGCCACCACCACCTC...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTGTCTTGGATTTGGACTaGGGAGAGGTGGAGTCTATA | + |
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Preference number: 4 (lower is better) Translates to: VQYLPSYRTPALLRCDKAVLDLD*GEVESI Trigger: TATAGACTCCACCTCTCCCCAGTCCAAATCCAAGAC...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGGTTCTTGGGGTCCAGTaGAGGTACCAGGCAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IYFQHSFELKQRHAWLVMVLGVQ*RYQAVS Trigger: ACTCACTGCCTGGTACCTCCACTGGACCCCAAGAAC...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAAAAGAGATACTCCAGCATCTaGAAAAGGTTGTGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPSYRTPALLRCDKAQKRYSSI*KRLCTQ Trigger: CTGGGTACACAACCTTTTTCAGATGCTGGAGTATCT...CTTTTGAGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | AATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAAATCCACATTTTATTTCTaGGGCCTGGAGACAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NISLPTGLQHCFAVTRLKSTFYF*GLETEP Trigger: TGGCTCTGTCTCCAGGCCCCAGAAATAAAATGTGGA...TTTGAGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IYFQHSFELKQRHAWLVMVLDGR*WWLERW Trigger: CCACCTTTCAAGCCACCACCACCTCCCATCAAGTAC...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | AATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACTTTCTCCACCAACCATaGAAAGGTGAACCTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NIVQYLPSYRTPALLRCDFLHQP*KGEPRW Trigger: CCACCTAGGTTCACCTTTTCATGGTTGGTGGAGAAA...GTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATCTGATGATGGTATCATaGGGAGCTAAGCTGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLFTSQVFADERGQYAGNLMMVS*GAKLAS Trigger: GGACGCCAGCTTAGCTCCTCATGATACCATCATCAG...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTACCATCGTCTTGGATTTaGACTGGGGAGAGGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SQVFADERGQYAGNRSHLPSSWI*TGERWS Trigger: ACTCCACCTCTCCCCAGTCCAAATCCAAGACGATGG...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTACTCTTGAGGAGTTCTTaGCATCTGTCCCACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVFADERGQYAGNRSHLLLRSS*HLSHWR Trigger: CCTCCAGTGGGACAGATGCCAAGAACTCCTCAAGAG...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| 3UTR CAA 72 bp | AAGCAGAGGCACGCCTGGCTGGTGATGATATTAATATaGTACAATATCTCCCTTCCTACAGGACTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KQRHAWLVMILI*YNISLPTGLQH Trigger: GTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATTAATATCATCACCAGCCAGGCGTGCCTCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTTTTTTCTCCTTTGTTTaGCAGGTCAAGTTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: VQYLPSYRTPALLRCDKAFFSFV*QVKLMS Trigger: TGACATCAACTTGACCTGCCAAACAAAGGAGAAAAA...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATCCTTCTCAGTTTCTGTaGCAGCCACTTGTGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: CLFTSQVFADERGQYAGNPSQFL*QPLVTH Trigger: GTGAGTCACAAGTGGCTGCCACAGAAACTGAGAAGG...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | AATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACTCATGCTGGAATTGCTaGTTTGAGGAGTTGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: NIVQYLPSYRTPALLRCDSCWNC*FEELHL Trigger: CAGATGCAACTCCTCAAACCAGCAATTCCAGCATGA...GTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTAGGATTGACAGTCAGATaGCAAGAGAATGTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SQVFADERGQYAGNRSHLGLTVR*QENVLP Trigger: TGGCAGGACATTCTCTTGCCATCTGACTGTCAATCC...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGATGGCATCTGTCCCACTaGAGGCTTCCAAATAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRWHLSH*RLPNSC Trigger: GCAACTATTTGGAAGCCTCCAGTGGGACAGATGCCA...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGACGTCATCTCCAACATTaGATAGCTCTTCCCACACTC | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRRHLQH*IALPTL Trigger: GAGTGTGGGAAGAGCTATTCAATGTTGGAGATGACG...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATGTGACCTTGGACCACTaGATCTGTACCAAGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: CLFTSQVFADERGQYAGNVTLDH*ICTKKF Trigger: AAACTTCTTGGTACAGATGCAGTGGTCCAAGGTCAC...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGATTTATTTCTGGGGCCTaGAGACAGAGCCATACACCA | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRFISGA*RQSHTP Trigger: TGGTGTATGGCTCTGTCTCCAGGCCCCAGAAATAAA...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGCTGGTGATAGGTCCATaGTCAATTTTAGTAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: IYFQHSFELKQRHAWLVMLVIGP*SILVVP Trigger: TGGAACTACTAAAATTGACCATGGACCTATCACCAG...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | GATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTCTGGAATTGCTGGTTTaGGGAGTTGCATCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: DERGQYAGNRSHLFPTFILELLV*GVASGV Trigger: GACACCAGATGCAACTCCTCAAACCAGCAATTCCAG...AATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAGTGGGGGTCTCTCCATaGTTTCATTTTGATACCGAT | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRVGVSP*FHFDTD Trigger: ATCGGTATCAAAATGAAATCATGGAGAGACCCCCAC...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | GATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTGAATATACGTGTACTTaGTGGGAGGTGGTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DERGQYAGNRSHLFPTFIEYTCT*WEVVVA Trigger: AGCCACCACCACCTCCCATCAAGTACACGTATATTC...AATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGAGTCATGAGGATTTCTaGTTTAGCAAAAACCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: IYFQHSFELKQRHAWLVMSHEDF*FSKNLD Trigger: GTCAAGGTTTTTGCTAAACCAGAAATCCTCATGACT...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAACCTAGGTGGAATTTCTaGGGAGGTATTTTGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: YLHLRCLQMKEGSMLGIEPRWNF*GGILKA Trigger: TGCTTTCAAAATACCTCCTCAGAAATTCCACCTAGG...TTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATGATTCTGCCTTTAAATaGTGTGGAATTGTTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: CLFTSQVFADERGQYAGNDSAFK*CGIVDV Trigger: CACGTCAACAATTCCACATCATTTAAAGGCAGAATC...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | ATGATATTAATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCTGGGATGGTCCACTGTaGATCCTTGTTAAAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: MILILYNISLPTGLQHCFWDGPL*ILVKTD Trigger: GTCAGTTTTAACAAGGATGCACAGTGGACCATCCCA...GAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATTAATATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | ATGATATTAATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCCCAAACAATAGTGTaGAGAAAAAGAGCAAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: MILILYNISLPTGLQHCFAQTIV*RKRAKP Trigger: CGGCTTTGCTCTTTTTCTGCACACTATTGTTTGGGC...GAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATTAATATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGATCTGAGGAGGTATTTTaGAAGCATGGTATTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRSEEVF*KHGISR Trigger: TCTGGAAATACCATGCTTTCAAAATACCTCCTCAGA...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGACCCAAAATCCGCTACTaGAATTCTTCTCTTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRPKIRY*NSSLHL Trigger: CAAATGAAGAGAAGAATTGCAGTAGCGGATTTTGGG...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTAGTAGTTCCATTTaGAGTTGTGAGGACATTTGG | + |
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Preference number: 4 (lower is better) Translates to: SQVFADERGQYAGNRSHLFSSSI*SCEDIW Trigger: CCAAATGTCCTCACAACTGCAAATGGAACTACTAAA...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR GCA 90 bp | ATGATATTAATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCAAACCAGGTGATATTTaGCTTGGGGAACACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: MILILYNISLPTGLQHCFKPGDI*LGEHIL Trigger: AAGAATGTGTTCCCCAAGGCAAATATCACCTGGTTT...GAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATTAATATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTCTCCTAAGACATCCATaGTGCTGTTTTCCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MKEGSMLGIEVIYFQHSFLLRHP*CCFPQS Trigger: TGACTGTGGAAAACAGCACCATGGATGTCTTAGGAG...AAATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | ATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTAAGTGTGTACTTCACTaGGTATCCATGAAACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MKEGSMLGIEVIYFQHSFKCVLH*VSMKLG Trigger: CCCCAGTTTCATGGATACCCAGTGAAGTACACACTT...AAATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CCA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTTGTGAGGACATTTaGAAATTCTGTGGTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: LFTSQVFADERGQYAGNRSCEDI*KFCGCT Trigger: AGTACAACCACAGAATTTCCAAATGTCCTCACAACT...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR TCA 90 bp | ATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTTTCCATTTGCAGTTGTaGGGACATTTGGAAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: MKEGSMLGIEVIYFQHSFFHLQL*GHLEIL Trigger: CAGAATTTCCAAATGTCCTCACAACTGCAAATGGAA...AAATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 90 bp | AGTCAGATGGCAAGAGAATGTCCTGCCATCGTCTTGGATTTGGACTaGGGAGAGGTGGAGTCTATAGTCTCCACCCAGCCTGATTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SQMARECPAIVLDLD*GEVESIVSTQPDSA Trigger: GGCAGAATCAGGCTGGGTGGAGACTATAGACTCCACCTCTCCCCAGTCCAAATCCAAGACGATGGCAGGACATTCTCTTGCCATCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 90 bp | AGTCCAATTTGTTACACCCTTCTCAGTTTCTGTGGCAGCCACTTGTaGCTCACAGGCATGCTCCTGCCCACAGTAGAGGCCATATTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPICYTLLSFCGSHL*LTGMLLPTVEAILG Trigger: CCCCAATATGGCCTCTACTGTGGGCAGGAGCATGCCTGTGAGTCACAAGTGGCTGCCACAGAAACTGAGAAGGGTGTAACAAATTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTCAGGCTTTGAGAGGATaGACAGTCAGATGGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQYLPSYRTPALLRCDKAQALRG*TVRWQE Trigger: CTCTTGCCATCTGACTGTCAATCCTCTCAAAGCCTG...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTTGCTGGTTTGAGGAGTaGCATCTGGTGTCAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VQYLPSYRTPALLRCDKACWFEE*HLVSTH Trigger: ATGGGTTGACACCAGATGCAACTCCTCAAACCAGCA...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTAAGAAGCAGCAGCTCTaGAGGAGTTCTTGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQYLPSYRTPALLRCDKAKKQQL*RSSWHL Trigger: CAGATGCCAAGAACTCCTCAAGAGCTGCTGCTTCTT...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | AATATTGTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACTGTCCTGCCATCGTCTaGGATTTGGACTGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIVQYLPSYRTPALLRCDCPAIV*DLDWGE Trigger: CTCTCCCCAGTCCAAATCCAAGACGATGGCAGGACA...GTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTACAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 90 bp | TCCTTAAGTACAGAGTCCAATTTGTTACACCCTTCTCAGTTTCTGTaGCAGCCACTTGTGACTCACAGGCATGCTCCTGCCCACAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSTESNLLHPSQFL*QPLVTHRHAPAHSR Trigger: TCTACTGTGGGCAGGAGCATGCCTGTGAGTCACAAGTGGCTGCCACAGAAACTGAGAAGGGTGTAACAAATTGGACTCTGTACTTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 90 bp | GGGCCTGGAGACAGAGCCATACACCAAGCTGTCATGTTGTTTGATTaGGATGGTCCACTGTGCATCCTTGTTAAAACTGACTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGDRAIHQAVMLFD*DGPLCILVKTDFSS Trigger: GGAACTGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTCTCCAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTGGTTTAGCAAAAACCTaGACTGTGGTGGACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQYLPSYRTPALLRCDKAGLAKT*TVVDIF Trigger: GAAGATGTCCACCACAGTCAAGGTTTTTGCTAAACC...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | TTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGATGGGGAGTCTGGTTCTaGGGGTCCAGTGGAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LFTSQVFADERGQYAGNRWGVWF*GSSGGT Trigger: GGTACCTCCACTGGACCCCAAGAACCAGACTCCCCA...TCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 90 bp | CCCAGCCTGATTCTGCCTTTAAATGATGTGGAATTGTTGACGTGGTaGTGGTGGGTGAAGAGAACTTCTTCCACTCCATCTTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSLILPLNDVELLTW*WWVKRTSSTPSFST Trigger: GGTGGAGAAAGATGGAGTGGAAGAAGTTCTCTTCACCCACCATCACCACGTCAACAATTCCACATCATTTAAAGGCAGAATCAGGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS-3UTR CAA 90 bp | GTACAATATCTCCCTTCCTACAGGACTCCAGCACTGCTTCGCTGTGACAAGGCTGTCCACTGTGCATCCTaGTTAAAACTGACTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQYLPSYRTPALLRCDKAVHCAS*LKLTSV Trigger: AACTGAAGTCAGTTTTAACAAGGATGCACAGTGGAC...AGCCTTGTCACAGCGAAGCAGTGCTGGAGTCCTGTAGGAAGGGAGATATTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS-3UTR CAA 90 bp | ATTTATTTCCAACATTCATTTGAGCTGAAGCAGAGGCACGCCTGGCTGGTGATGGCTGGAATTGCTGGTTaGAGGAGTTGCATCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IYFQHSFELKQRHAWLVMAGIAG*RSCIWC Trigger: ACACCAGATGCAACTCCTCAAACCAGCAATTCCAGC...CATCACCAGCCAGGCGTGCCTCTGCTTCAGCTCAAATGAATGTTGGAAATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 90 bp | GTGAGGACATTTGGAAATTCTGTGGTTGTACTGATGATGGTATCATaGGGAGCTAAGCTGGCGTCCAAAGGGGCTGAAGTGTGTACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRTFGNSVVVLMMVS*GAKLASKGAEVCTS Trigger: TGAAGTACACACTTCAGCCCCTTTGGACGCCAGCTTAGCTCCTCATGATACCATCATCAGTACAACCACAGAATTTCCAAATGTCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 90 bp | AGCAAAGCCGCGACAAGCACAGGCCAGGACATTCCATCACTGGGTTaGTTAACTATGATACTGGTGATAGGTCCATGGTCAATTTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SKAATSTGQDIPSLG*LTMILVIGPWSILV Trigger: TACTAAAATTGACCATGGACCTATCACCAGTATCATAGTTAATCAACCCAGTGATGGAATGTCCTGGCCTGTGCTTGTCGCGGCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS GCA 90 bp | GCCATACACCAAGCTGTCATGTTGTTTGATTGGGATGGTCCACTGTaGATCCTTGTTAAAACTGACTTCAGTTCCCAAAATCCGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: AIHQAVMLFDWDGPL*ILVKTDFSSQNPLL Trigger: CAGTAGCGGATTTTGGGAACTGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 90 bp | ACCTTGGACCACTGCATCTGTACCAAGAAGTTTTTCTCCTTTGTTTaGCAGGTCAAGTTGATGTCAGAACCAGGTAGAGCATACACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLDHCICTKKFFSFV*QVKLMSEPGRAYTS Trigger: TGACGTGTATGCTCTACCTGGTTCTGACATCAACTTGACCTGCCAAACAAAGGAGAAAAACTTCTTGGTACAGATGCAGTGGTCCAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS-3UTR CAA 90 bp | TGCTTATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATGACATCTTCCAGGCTTaGAGAGGATTGACAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLFTSQVFADERGQYAGNDIFQA*RGLTVR Trigger: TCTGACTGTCAATCCTCTCAAAGCCTGGAAGATGTC...ATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTACAGGTGATATTTGCCTaGGGGAACACATTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQVFADERGQYAGNRSHLQVIFA*GNTFFS Trigger: ACTGAAGAATGTGTTCCCCAAGGCAAATATCACCTG...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 90 bp | GGCCATATTGGGGATGATAAAGAGCAATCATGTCATTCTTATCTGTaGCCTTGGACCACTGCATCTGTACCAAGAAGTTTTTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHIGDDKEQSCHSYL*PWTTASVPRSFSPL Trigger: CAAAGGAGAAAAACTTCTTGGTACAGATGCAGTGGTCCAAGGTCACAGATAAGAATGACATGATTGCTCTTTATCATCCCCAATATGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTAACAGTAGAGGCCATATaGGGGATGATAAAGAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVFADERGQYAGNRSHLTVEAI*GMIKSN Trigger: ATTGCTCTTTATCATCCCCAATATGGCCTCTACTGT...TAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS-3UTR CAA 90 bp | GATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTTCTTATCTGTGACCTaGGACCACTGCATCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: DERGQYAGNRSHLFPTFIFLSVT*DHCICT Trigger: GGTACAGATGCAGTGGTCCAAGGTCACAGATAAGAA...AATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | TATTTACATCTCAGGTGTTTGCAGATGAAAGAGGGCAGTATGCTGGGAATAGAAAGTACAGAGTCCAATTaGTTACACCCTTCTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YLHLRCLQMKEGSMLGIESTESN*LHPSQF Trigger: AAACTGAGAAGGGTGTAACAAATTGGACTCTGTACT...TTCTATTCCCAGCATACTGCCCTCTTTCATCTGCAAACACCTGAGATGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS TCA 90 bp | AACCATGAAAAGGTGAACCTAGGTGGAATTTCTGAGGAGGTATTTTaGAAGCATGGTATTTCCAGAGTCCGATTTGTCTCTATTTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: NHEKVNLGGISEEVF*KHGISRVRFVSISI Trigger: AATAGAAATAGAGACAAATCGGACTCTGGAAATACCATGCTTTCAAAATACCTCCTCAGAAATTCCACCTAGGTTCACCTTTTCATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS-3UTR CAA 90 bp | ATGAAAGAGGGCAGTATGCTGGGAATAGAAGTCATTTATTTCCAACATTCATTTCATTCCATCACTGGGTaGATTAACTATGATACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MKEGSMLGIEVIYFQHSFHSITG*INYDTG Trigger: ACCAGTATCATAGTTAATCAACCCAGTGATGGAATG...AAATGAATGTTGGAAATAAATGACTTCTATTCCCAGCATACTGCCCTCTTTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | TGTTACACCCTTCTCAGTTTCTGTGGCAGCCACTTGTaGCTCACAGGCATGCTCCTGCCCACAGTAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CYTLLSFCGSHL*LTGMLLPTVEA Trigger: GGCCTCTACTGTGGGCAGGAGCATGCCTGTGAGTCACAAGTGGCTGCCACAGAAACTGAGAAGGGTGTAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | TCACTGGGTATCCATGAAACTGGGGAGTCTGGTTCTTaGGGTCCAGTGGAGGTACCAGGCAGTGAGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLGIHETGESGS*GPVEVPGSECH Trigger: ATGGCACTCACTGCCTGGTACCTCCACTGGACCCCAAGAACCAGACTCCCCAGTTTCATGGATACCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | GCAAGAGAATGTCCTGCCATCGTCTTGGATTTGGACTaGGGAGAGGTGGAGTCTATAGTCTCCACCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARECPAIVLDLD*GEVESIVSTQP Trigger: AGGCTGGGTGGAGACTATAGACTCCACCTCTCCCCAGTCCAAATCCAAGACGATGGCAGGACATTCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | AGCTGGCGTCCAAAGGGGCTGAAGTGTGTACTTCACTaGGTATCCATGAAACTGGGGAGTCTGGTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRPKGLKCVLH*VSMKLGSLVLG Trigger: CCCAAGAACCAGACTCCCCAGTTTCATGGATACCCAGTGAAGTACACACTTCAGCCCCTTTGGACGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | GAGAGGATTGACAGTCAGATGGCAAGAGAATGTCCTGCCATCGTCTaGGATTTGGACTGGGGAGAGGTGGAGTCTATAGTCTCCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERIDSQMARECPAIV*DLDWGEVESIVSTQ Trigger: CTGGGTGGAGACTATAGACTCCACCTCTCCCCAGTCCAAATCCAAGACGATGGCAGGACATTCTCTTGCCATCTGACTGTCAATCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | GACAGTCAGATGGCAAGAGAATGTCCTGCCATCGTCTaGGATTTGGACTGGGGAGAGGTGGAGTCTATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DSQMARECPAIV*DLDWGEVESIV Trigger: GACTATAGACTCCACCTCTCCCCAGTCCAAATCCAAGACGATGGCAGGACATTCTCTTGCCATCTGACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | GGGCCTGGAGACAGAGCCATACACCAAGCTGTCATGTaGTTTGATTGGGATGGTCCACTGTGCATCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPGDRAIHQAVM*FDWDGPLCILV Trigger: AACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTCTCCAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | GAGGACCTCCATCTCATGACAACACAGGTCGCATCCAATGGGTTCTaGAATATACGTGTACTTGATGGGAGGTGGTGGTGGCTTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDLHLMTTQVASNGF*NIRVLDGRWWWLER Trigger: CCTTTCAAGCCACCACCACCTCCCATCAAGTACACGTATATTCAAGAACCCATTGGATGCGACCTGTGTTGTCATGAGATGGAGGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | GCGACAAGCACAGGCCAGGACATTCCATCACTGGGTTaGTTAACTATGATACTGGTGATAGGTCCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATSTGQDIPSLG*LTMILVIGPWS Trigger: TGACCATGGACCTATCACCAGTATCATAGTTAATCAACCCAGTGATGGAATGTCCTGGCCTGTGCTTGTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | AATGGGTTCTTGAATATACGTGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGGGGGTCTCTCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: NGFLNIRVLDGR*WWLERWGSLHD Trigger: ATCATGGAGAGACCCCCACCTTTCAAGCCACCACCACCTCCCATCAAGTACACGTATATTCAAGAACCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | CATCTCATGACAACACAGGTCGCATCCAATGGGTTCTaGAATATACGTGTACTTGATGGGAGGTGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLMTTQVASNGF*NIRVLDGRWWW Trigger: CCACCACCACCTCCCATCAAGTACACGTATATTCAAGAACCCATTGGATGCGACCTGTGTTGTCATGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | GCAAAAACCTTGACTGTGGTGGACATCTTCCAGGCTTTGAGAGGATaGACAGTCAGATGGCAAGAGAATGTCCTGCCATCGTCTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: AKTLTVVDIFQALRG*TVRWQENVLPSSWI Trigger: AATCCAAGACGATGGCAGGACATTCTCTTGCCATCTGACTGTCAATCCTCTCAAAGCCTGGAAGATGTCCACCACAGTCAAGGTTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | TCTGGTTTAGCAAAAACCTTGACTGTGGTGGACATCTTCCAGGCTTaGAGAGGATTGACAGTCAGATGGCAAGAGAATGTCCTGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: SGLAKTLTVVDIFQA*RGLTVRWQENVLPS Trigger: CGATGGCAGGACATTCTCTTGCCATCTGACTGTCAATCCTCTCAAAGCCTGGAAGATGTCCACCACAGTCAAGGTTTTTGCTAAACCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | TTCTGGGGCCTGGAGACAGAGCCATACACCAAGCTGTCATGTTGTTaGATTGGGATGGTCCACTGTGCATCCTTGTTAAAACTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FWGLETEPYTKLSCC*IGMVHCASLLKLTS Trigger: TGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTCTCCAGGCCCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | TTATTTCTGGGGCCTGGAGACAGAGCCATACACCAAGCTGTCATGTaGTTTGATTGGGATGGTCCACTGTGCATCCTTGTTAAAACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFLGPGDRAIHQAVM*FDWDGPLCILVKTD Trigger: GTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTCTCCAGGCCCCAGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | TTTGGAAATTCTGTGGTTGTACTGATGATGGTATCATaGGGAGCTAAGCTGGCGTCCAAAGGGGCTGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FGNSVVVLMMVS*GAKLASKGAEV Trigger: CACTTCAGCCCCTTTGGACGCCAGCTTAGCTCCTCATGATACCATCATCAGTACAACCACAGAATTTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | CTCACAGGCATGCTCCTGCCCACAGTAGAGGCCATATaGGGGATGATAAAGAGCAATCATGTCATTCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: LTGMLLPTVEAI*GMIKSNHVILI Trigger: GATAAGAATGACATGATTGCTCTTTATCATCCCCAATATGGCCTCTACTGTGGGCAGGAGCATGCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS CAA 72 bp | GCAAAAACCTTGACTGTGGTGGACATCTTCCAGGCTTaGAGAGGATTGACAGTCAGATGGCAAGAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: AKTLTVVDIFQA*RGLTVRWQENV Trigger: GACATTCTCTTGCCATCTGACTGTCAATCCTCTCAAAGCCTGGAAGATGTCCACCACAGTCAAGGTTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | GACAGAGCCATACACCAAGCTGTCATGTTGTTTGATTaGGATGGTCCACTGTGCATCCTTGTTAAAACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DRAIHQAVMLFD*DGPLCILVKTD Trigger: GTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | CTGGAGACAGAGCCATACACCAAGCTGTCATGTTGTTaGATTGGGATGGTCCACTGTGCATCCTTGTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LETEPYTKLSCC*IGMVHCASLLK Trigger: TTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGTGTATGGCTCTGTCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 90 bp | AAGTTGATGTCAGAACCAGGTAGAGCATACACGTCATCTCCAACATaGAATAGCTCTTCCCACACTCCCCTGAAAAACTGTATCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: KLMSEPGRAYTSSPT*NSSSHTPLKNCIWM Trigger: CATCCAGATACAGTTTTTCAGGGGAGTGTGGGAAGAGCTATTCAATGTTGGAGATGACGTGTATGCTCTACCTGGTTCTGACATCAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS TCA 72 bp | CCAAGAAGTTTTTCTCCTTTGTTTGGCAGGTCAAGTTaGTGTCAGAACCAGGTAGAGCATACACGTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSFSPLFGRSS*CQNQVEHTRHL Trigger: GAGATGACGTGTATGCTCTACCTGGTTCTGACATCAACTTGACCTGCCAAACAAAGGAGAAAAACTTCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | CACTGCATCTGTACCAAGAAGTTTTTCTCCTTTGTTTaGCAGGTCAAGTTGATGTCAGAACCAGGTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HCICTKKFFSFV*QVKLMSEPGRA Trigger: TGCTCTACCTGGTTCTGACATCAACTTGACCTGCCAAACAAAGGAGAAAAACTTCTTGGTACAGATGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS CAA 90 bp | TGCATCTGTACCAAGAAGTTTTTCTCCTTTGTTTGGCAGGTCAAGTaGATGTCAGAACCAGGTAGAGCATACACGTCATCTCCAACATTG | + |
|
Preference number: 6 (lower is better) Translates to: CICTKKFFSFVWQVK*MSEPGRAYTSSPTL Trigger: CAATGTTGGAGATGACGTGTATGCTCTACCTGGTTCTGACATCAACTTGACCTGCCAAACAAAGGAGAAAAACTTCTTGGTACAGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
||
| CDS CAA 90 bp | ACCAAGCTGTCATGTTGTTTGATTGGGATGGTCCACTGTGCATCCTaGTTAAAACTGACTTCAGTTCCCAAAATCCGCTACTGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: TKLSCCLIGMVHCAS*LKLTSVPKIRYCNS Trigger: AGAATTGCAGTAGCGGATTTTGGGAACTGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | ATTCTGCCTTTAAATGATGTGGAATTGTTGACGTGGTaGTGGTGGGTGAAGAGAACTTCTTCCACTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ILPLNDVELLTW*WWVKRTSSTPS Trigger: AGATGGAGTGGAAGAAGTTCTCTTCACCCACCATCACCACGTCAACAATTCCACATCATTTAAAGGCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | TTGCCATCTTTAGTAGTCATGCTGGAATTGCTGGTTTaGGGAGTTGCATCTGGTGTCAACCCATTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LPSLVVMLELLV*GVASGVNPFSS Trigger: AGATGAAAATGGGTTGACACCAGATGCAACTCCTCAAACCAGCAATTCCAGCATGACTACTAAAGATGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | CACAATGAGGTTGTAGACTGTAGTCTTGATGCCTTCTaGATACAGAGTAAAGATGCACTCATACTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: HNEVVDCSLDAF*IQSKDALILST Trigger: GGTGGAAAGTATGAGTGCATCTTTACTCTGTATCCAGAAGGCATCAAGACTACAGTCTACAACCTCATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | ACCAAGAAGTTTTTCTCCTTTGTTTGGCAGGTCAAGTaGATGTCAGAACCAGGTAGAGCATACACGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TKKFFSFVWQVK*MSEPGRAYTSS Trigger: AGATGACGTGTATGCTCTACCTGGTTCTGACATCAACTTGACCTGCCAAACAAAGGAGAAAAACTTCTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | TCATGTTGTTTGATTGGGATGGTCCACTGTGCATCCTaGTTAAAACTGACTTCAGTTCCCAAAATCCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SCCLIGMVHCAS*LKLTSVPKIRY Trigger: GTAGCGGATTTTGGGAACTGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | TGGCTTGAAAGGTGGGGGTCTCTCCATGATTTCATTTaGATACCGATACCATTTTCTTACTCCAAGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: WLERWGSLHDFI*IPIPFSYSKPK Trigger: TTTGGGCTTGGAGTAAGAAAATGGTATCGGTATCAAAATGAAATCATGGAGAGACCCCCACCTTTCAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | GGGGATGATAAAGAGCAATCATGTCATTCTTATCTGTaGCCTTGGACCACTGCATCTGTACCAAGAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GDDKEQSCHSYL*PWTTASVPRSF Trigger: AAAACTTCTTGGTACAGATGCAGTGGTCCAAGGTCACAGATAAGAATGACATGATTGCTCTTTATCATCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | AAGGTGAACCTAGGTGGAATTTCTGAGGAGGTATTTTaGAAGCATGGTATTTCCAGAGTCCGATTTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KVNLGGISEEVF*KHGISRVRFVS Trigger: AGAGACAAATCGGACTCTGGAAATACCATGCTTTCAAAATACCTCCTCAGAAATTCCACCTAGGTTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS TCA 72 bp | GTTTCGTTGGGGCTATCACCGAATCAAAGGAAACCGTaGTGGGTTGTGATGAAGTATTCCACATTTTATTTC | + |
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Preference number: 6 (lower is better) Translates to: VSLGLSPNQRKP*WVVMKYSTFYF Trigger: GAAATAAAATGTGGAATACTTCATCACAACCCATCACGGTTTCCTTTGATTCGGTGATAGCCCCAACGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS GCA 72 bp | CAAGCTGTCATGTTGTTTGATTGGGATGGTCCACTGTaGATCCTTGTTAAAACTGACTTCAGTTCCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: QAVMLFDWDGPL*ILVKTDFSSQN Trigger: ATTTTGGGAACTGAAGTCAGTTTTAACAAGGATGCACAGTGGACCATCCCAATCAAACAACATGACAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CAA 72 bp | AGAAATCTTCCGTCTATAAACCAGGTGATATTTGCCTaGGGGAACACATTCTTCAGTAGGCAGGTAAATACT | + |
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Preference number: 6 (lower is better) Translates to: RNLPSINQVIFA*GNTFFSRQVNT Trigger: AGTATTTACCTGCCTACTGAAGAATGTGTTCCCCAAGGCAAATATCACCTGGTTTATAGACGGAAGATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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| CDS CCA 72 bp | AATTTTAGTAGTTCCATTTGCAGTTGTGAGGACATTTaGAAATTCTGTGGTTGTACTGATGATGGTATCATG | + |
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Preference number: 6 (lower is better) Translates to: NFSSSICSCEDI*KFCGCTDDGIM Trigger: CATGATACCATCATCAGTACAACCACAGAATTTCCAAATGTCCTCACAACTGCAAATGGAACTACTAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023336.10 |
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