Pregenerated sensors for CD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030342Ensembl transcript IDs: ENSMUST00000032492.9
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCATCCTTGTGGGTATAGCCCCAGACGGCGGCGGCTATCTCAATaGCGAATATCACCAAGAGGAACCCGAAGAACAATCCCAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPCGYSPRRRRLSQ*RISPRGTRRTIPAC Trigger: GCATGCTGGGATTGTTCTTCGGGTTCCTCTTGGTGATATTCGCCATTGAGATAGCCGCCGCCGTCTGGGGCTATACCCACAAGGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS TCA 90 bp | AAGGACCAGCTATGCCACAGCAGTCCAACGCCATATGGATGGCTTTaGGTGTTTCCCGCTGGGGTTCATCCTTGCTCCGTAACTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDQLCHSSPTPYGWL*VFPAGVHPCSVTFG Trigger: ACCAAAAGTTACGGAGCAAGGATGAACCCCAGCGGGAAACACTCAAAGCCATCCATATGGCGTTGGACTGCTGTGGCATAGCTGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS GCA 90 bp | GAAGATCATGCCGAAGATCATCACCACGGCGATGCCGATACCCACTaGTCCAATGATGTGGAACTTGTTGTTGAAGACCTCACTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDHAEDHHHGDADTH*SNDVELVVEDLTDG Trigger: GCCATCAGTGAGGTCTTCAACAACAAGTTCCACATCATTGGAGCAGTGGGTATCGGCATCGCCGTGGTGATGATCTTCGGCATGATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS GCA 90 bp | AAACTTTCCAAAAGCTGTTTCTTGGGGCAGGTGTCCGAGATAAACTaGTCCAAAGGACCAGCTATGCCACAGCAGTCCAACGCCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSKSCFLGQVSEIN*SKGPAMPQQSNAIW Trigger: CCATATGGCGTTGGACTGCTGTGGCATAGCTGGTCCTTTGGAGCAGTTTATCTCGGACACCTGCCCCAAGAAACAGCTTTTGGAAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CCA 90 bp | TTGTTGTTGAAGACCTCACTGATGGCTTCAGGGCAGGGCTTAACCTaGAAACTTTCCAAAAGCTGTTTCTTGGGGCAGGTGTCCGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLLKTSLMASGQGLT*KLSKSCFLGQVSEI Trigger: TATCTCGGACACCTGCCCCAAGAAACAGCTTTTGGAAAGTTTCCAGGTTAAGCCCTGCCCTGAAGCCATCAGTGAGGTCTTCAACAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 72 bp | GCTATGCCACAGCAGTCCAACGCCATATGGATGGCTTaGAGTGTTTCCCGCTGGGGTTCATCCTTGCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AMPQQSNAIWMA*SVSRWGSSLLR Trigger: ACGGAGCAAGGATGAACCCCAGCGGGAAACACTCAAAGCCATCCATATGGCGTTGGACTGCTGTGGCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS TCA 72 bp | CTATGCCACAGCAGTCCAACGCCATATGGATGGCTTTaGGTGTTTCCCGCTGGGGTTCATCCTTGCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LCHSSPTPYGWL*VFPAGVHPCSV Trigger: TACGGAGCAAGGATGAACCCCAGCGGGAAACACTCAAAGCCATCCATATGGCGTTGGACTGCTGTGGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CCA 72 bp | TGTGGGTATAGCCCCAGACGGCGGCGGCTATCTCAATaGCGAATATCACCAAGAGGAACCCGAAGAACAATC | + |
|
Preference number: 6 (lower is better) Translates to: CGYSPRRRRLSQ*RISPRGTRRTI Trigger: GATTGTTCTTCGGGTTCCTCTTGGTGATATTCGCCATTGAGATAGCCGCCGCCGTCTGGGGCTATACCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS GCA 72 bp | GCCGAAGATCATCACCACGGCGATGCCGATACCCACTaGTCCAATGATGTGGAACTTGTTGTTGAAGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AEDHHHGDADTH*SNDVELVVEDL Trigger: GAGGTCTTCAACAACAAGTTCCACATCATTGGAGCAGTGGGTATCGGCATCGCCGTGGTGATGATCTTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 72 bp | GCGATGCCGATACCCACTGCTCCAATGATGTGGAACTaGTTGTTGAAGACCTCACTGATGGCTTCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AMPIPTAPMMWN*LLKTSLMASGQ Trigger: CTGCCCTGAAGCCATCAGTGAGGTCTTCAACAACAAGTTCCACATCATTGGAGCAGTGGGTATCGGCATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 90 bp | AAAGGACCAGCTATGCCACAGCAGTCCAACGCCATATGGATGGCTTaGAGTGTTTCCCGCTGGGGTTCATCCTTGCTCCGTAACTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KGPAMPQQSNAIWMA*SVSRWGSSLLRNFW Trigger: CCAAAAGTTACGGAGCAAGGATGAACCCCAGCGGGAAACACTCAAAGCCATCCATATGGCGTTGGACTGCTGTGGCATAGCTGGTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 90 bp | ACGGCGATGCCGATACCCACTGCTCCAATGATGTGGAACTTGTTGTaGAAGACCTCACTGATGGCTTCAGGGCAGGGCTTAACCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TAMPIPTAPMMWNLL*KTSLMASGQGLTWK Trigger: TTTCCAGGTTAAGCCCTGCCCTGAAGCCATCAGTGAGGTCTTCAACAACAAGTTCCACATCATTGGAGCAGTGGGTATCGGCATCGCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS GCA 72 bp | AAAAGCTGTTTCTTGGGGCAGGTGTCCGAGATAAACTaGTCCAAAGGACCAGCTATGCCACAGCAGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KSCFLGQVSEIN*SKGPAMPQQSN Trigger: GTTGGACTGCTGTGGCATAGCTGGTCCTTTGGAGCAGTTTATCTCGGACACCTGCCCCAAGAAACAGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CCA 72 bp | AAGACCTCACTGATGGCTTCAGGGCAGGGCTTAACCTaGAAACTTTCCAAAAGCTGTTTCTTGGGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KTSLMASGQGLT*KLSKSCFLGQV Trigger: CACCTGCCCCAAGAAACAGCTTTTGGAAAGTTTCCAGGTTAAGCCCTGCCCTGAAGCCATCAGTGAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 72 bp | CCGATACCCACTGCTCCAATGATGTGGAACTTGTTGTaGAAGACCTCACTGATGGCTTCAGGGCAGGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PIPTAPMMWNLL*KTSLMASGQGL Trigger: TAAGCCCTGCCCTGAAGCCATCAGTGAGGTCTTCAACAACAAGTTCCACATCATTGGAGCAGTGGGTATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS GCA 72 bp | TGTAGAAACTGGAATGGTTATTCTCTTGCTCGAAGATaGTCTTGGTCTGAGAGTCGAATCGGAGCCATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CRNWNGYSLARR*SWSESRIGAIV Trigger: GACTATGGCTCCGATTCGACTCTCAGACCAAGAGCATCTTCGAGCAAGAGAATAACCATTCCAGTTTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||
| CDS CAA 72 bp | GTACACTCCTGTGTAGAAACTGGAATGGTTATTCTCTaGCTCGAAGATGCTCTTGGTCTGAGAGTCGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: VHSCVETGMVIL*LEDALGLRVES Trigger: CGATTCGACTCTCAGACCAAGAGCATCTTCGAGCAAGAGAATAACCATTCCAGTTTCTACACAGGAGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032492.9 |
||