Pregenerated sensors for CD8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053977Ensembl transcript IDs: ENSMUST00000066747.14, ENSMUST00000172321.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGGGGTGAGATCCCTGCACCAGTCAGTGAGGGTTCCTCTAGCTTaGGTTCTCTCCGGGTCTACAGATCCTGCTGTTTCCACCTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: MGVRSLHQSVRVPLA*VLSGSTDPAVSTSD Trigger: ATCAGAGGTGGAAACAGCAGGATCTGTAGACCCGGAGAGAACCCAAGCTAGAGGAACCCTCACTGACTGGTGCAGGGATCTCACCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 90 bp | ATGTTTAGACATGGGAGAGGGCCTGCCTGCAGCTTCTCTGATGCCTaGGTCGTATCTGTCAAACCTCACCCTCTGCTGTCCAAGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: MFRHGRGPACSFSDA*VVSVKPHPLLSKSR Trigger: TCTGCTCTTGGACAGCAGAGGGTGAGGTTTGACAGATACGACTCAGGCATCAGAGAAGCTGCAGGCAGGCCCTCTCCCATGTCTAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 90 bp | ACAGGGACCCAGAGGGTCTGCGGCAGTGGTTTGAATAGCTTTAATTaGATTCTACTACAGCCTTCAGTGACAGAGGGGAGTGTTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: TGTQRVCGSGLNSFN*ILLQPSVTEGSVFQ Trigger: CTGGAAAACACTCCCCTCTGTCACTGAAGGCTGTAGTAGAATCCAATTAAAGCTATTCAAACCACTGCCGCAGACCCTCTGGGTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 90 bp | TCCAAGAGCAGAGAGAATCATAATTCTACAGGAATTTCACAGTGGTaGTTTGCCACGCACTCTGGTGGAGTCAGCTTGACAGGCGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SKSRENHNSTGISQW*FATHSGGVSLTGES Trigger: GCTTTCGCCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCTGTAGAATTATGATTCTCTCTGCTCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 90 bp | CTGTCCAAGAGCAGAGAGAATCATAATTCTACAGGAATTTCACAGTaGTGGTTTGCCACGCACTCTGGTGGAGTCAGCTTGACAGGCGAA | + |
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Preference number: 1 (lower is better) Translates to: LSKSRENHNSTGISQ*WFATHSGGVSLTGE Trigger: TTCGCCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCTGTAGAATTATGATTCTCTCTGCTCTTGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 90 bp | GGTGCACCGCTAAAGGCAGTTCTCCTGACTTTGATTTGTTACATCTaGTGCTCACAGCCAGAGCTGAGCAGATCACAGATTCATACCACT | + |
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Preference number: 1 (lower is better) Translates to: GAPLKAVLLTLICYI*CSQPELSRSQIHTT Trigger: AGTGGTATGAATCTGTGATCTGCTCAGCTCTGGCTGTGAGCATCAGATGTAACAAATCAAAGTCAGGAGAACTGCCTTTAGCGGTGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 90 bp | CTTATATGGTACTGTGAGAGGAAATTAGCTCTGGGGCAGCAGTTTTaGCAGTCAGCGTCTTCCTCCACGTCTAGTCTGCCTCTTTACATC | + |
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Preference number: 1 (lower is better) Translates to: LIWYCERKLALGQQF*QSASSSTSSLPLYI Trigger: GATGTAAAGAGGCAGACTAGACGTGGAGGAAGACGCTGACTGTCAAAACTGCTGCCCCAGAGCTAATTTCCTCTCACAGTACCATATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR GCA 90 bp | GCAGCTTCTCTGATGCCTGAGTCGTATCTGTCAAACCTCACCCTCTaGTGTCCAAGAGCAGAGAGAATCATAATTCTACAGGAATTTCAC | + |
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Preference number: 1 (lower is better) Translates to: AASLMPESYLSNLTL*CPRAERIIILQEFH Trigger: GTGAAATTCCTGTAGAATTATGATTCTCTCTGCTCTTGGACAGCAGAGGGTGAGGTTTGACAGATACGACTCAGGCATCAGAGAAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR GCA 90 bp | ATACATAAGACAGCAGGAAACTTGAAAAAGGAGGGCCTGGCCTCTTaGAAGAAGAGATCTCTGAAGTCATGTAGTAGTTGTAGCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: IHKTAGNLKKEGLAS*KKRSLKSCSSCSFL Trigger: CAGGAAGCTACAACTACTACATGACTTCAGAGATCTCTTCTTGCAAGAGGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGTCTTATGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCACATCCAAGTCTCATGTTTAGACATGGGAGAGGGCCTGCCTGCAGCTTCTGGGACCCAGAGGGTCTaGGGCAGTGGTTTGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: EHIQVSCLDMGEGLPAASGTQRV*GSGLNS Trigger: GCTATTCAAACCACTGCCGCAGACCCTCTGGGTCCC...AGAAGCTGCAGGCAGGCCCTCTCCCATGTCTAAACATGAGACTTGGATGTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAATTTCACAGTGGTGGTTTGCCACGCACTCTGGTGGAGTCAGCTTGACAGGGAGGGCCTGGCCTCTTaGAAGAAGAGATCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RNFTVVVCHALWWSQLDREGLAS*KKRSLK Trigger: CTTCAGAGATCTCTTCTTGCAAGAGGCCAGGCCCTC...CCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCACATCCAAGTCTCATGTTTAGACATGGGAGAGGGCCTGCCTGCAGCTTCTGCTCACAGCCAGAGCTaGGCAGATCACAGATTCATA | + |
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Preference number: 2 (lower is better) Translates to: EHIQVSCLDMGEGLPAASAHSQS*ADHRFI Trigger: TATGAATCTGTGATCTGCTCAGCTCTGGCTGTGAGC...AGAAGCTGCAGGCAGGCCCTCTCCCATGTCTAAACATGAGACTTGGATGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAAGACAGCAGGAAACTTaGAAAAGGAGGGCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTRQQET*KRRAWP Trigger: AGGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGTCT...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCTCAGCTTCTTCTATATaGTGGGCAGACAGGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: ESHALQLGQFDKRKLGSCSASSI*WADRRF Trigger: AAATCTCCTGTCTGCCCATCATATAGAAGAAGCTGA...GCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTCTGGCGTTCCCTCTAAACCATAAATTAATTTTCCACTCCCGCGTTAGTGGGACCCAGAGGGTCTaGGGCAGTGGTTTGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: WSLAFPLNHKLIFHSRVSGTQRV*GSGLNS Trigger: GCTATTCAAACCACTGCCGCAGACCCTCTGGGTCCC...ACTAACGCGGGAGTGGAAAATTAATTTATGGTTTAGAGGGAACGCCAGACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATTCTTACAAGGGGCTCTaGTGTCCAGGTGCACCGCTA | + |
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Preference number: 2 (lower is better) Translates to: FDKRKLGSCPQGKEFHRNSYKGL*CPGAPL Trigger: TAGCGGTGCACCTGGACATCAGAGCCCCTTGTAAGA...ATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTCTGGCGTTCCCTCTAAACCATAAATTAATTTTCCACTCCCGCGTTAGTTCTTACAAGGGGCTCTaGTGTCCAGGTGCACCGCTA | + |
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Preference number: 2 (lower is better) Translates to: WSLAFPLNHKLIFHSRVSSYKGL*CPGAPL Trigger: TAGCGGTGCACCTGGACATCAGAGCCCCTTGTAAGA...ACTAACGCGGGAGTGGAAAATTAATTTATGGTTTAGAGGGAACGCCAGACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAATTAGCTCTGGGGCAGCAGTTTTGACAGTCAGCGTCTTCCTCCACGTCTCTGCGGCAGTGGTTTaGATAGCTTTAATTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: EEISSGAAVLTVSVFLHVSAAVV*IALIGF Trigger: GAATCCAATTAAAGCTATTCAAACCACTGCCGCAGA...GACGTGGAGGAAGACGCTGACTGTCAAAACTGCTGCCCCAGAGCTAATTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGATCTGCGGCAGTGGTTTaGATAGCTTTAATTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: SGESHALQLGQFDKRKLGSAAVV*IALIGF Trigger: GAATCCAATTAAAGCTATTCAAACCACTGCCGCAGA...TCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAATTTCACAGTGGTGGTTTGCCACGCACTCTGGTGGAGTCAGCTTGACAGGTCTGGTGTTACAGTCTaGTCATTACTCCCATTGTAT | + |
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Preference number: 2 (lower is better) Translates to: RNFTVVVCHALWWSQLDRSGVTV*SLLPLY Trigger: ATACAATGGGAGTAATGAGCAGACTGTAACACCAGA...CCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CAA 90 bp | CTGATGCTCACAGCCAGAGCTGAGCAGATCACAGATTCATACCACTaGCTTCCTTGCAGTTTGAGGCACAAGCATGCTATACTAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LMLTARAEQITDSYH*LPCSLRHKHAILKT Trigger: TGTCTTTAGTATAGCATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGTGATCTGCTCAGCTCTGGCTGTGAGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGCAGAAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCGCTCACAGCCAGAGCTaGGCAGATCACAGATTCATA | + |
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Preference number: 2 (lower is better) Translates to: GLQKEPGNLTEIKIFSTGAHSQS*ADHRFI Trigger: TATGAATCTGTGATCTGCTCAGCTCTGGCTGTGAGC...GCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTTCTGCAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACATTGATTTGTTACATCTaGTGCTCACAGCCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTLICYI*CSQPEL Trigger: CAGCTCTGGCTGTGAGCATCAGATGTAACAAATCAA...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTGTTACTTATATGGTACTGTGAGAGGAAATTAGCTCTGGGGCAGCAGTTTCTGGGGCAGCAGTTTTaGCAGTCAGCGTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: YLLLIWYCERKLALGQQFLGQQF*QSASSS Trigger: GGAGGAAGACGCTGACTGTCAAAACTGCTGCCCCAG...AAACTGCTGCCCCAGAGCTAATTTCCTCTCACAGTACCATATAAGTAACAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACATACCACTTGCTTCCTTaGAGTTTGAGGCACAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTYHLLP*SLRHKH Trigger: ATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTA...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATTCCCTCCTGGACAGGCTACATTCCATaGCAAGAGCAAGTTGAGATA | + |
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Preference number: 2 (lower is better) Translates to: GSLEAAHKEKSFTEIPSWTGYIP*QEQVEI Trigger: TATCTCAACTTGCTCTTGGCATGGAATGTAGCCTGT...CCAGGAGGGAATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR CCA 90 bp | AGAATCATAATTCTACAGGAATTTCACAGTGGTGGTTTGCCACGCACTCTGGTGACAGAAATTCCCTCCTaGAGTCTGGCGTTCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: RIIILQEFHSGGLPRTLVTEIPS*SLAFPL Trigger: TAGAGGGAACGCCAGACTCCAGGAGGGAATTTCTGT...CACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCTGTAGAATTATGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCATGCCAAGAGAGACAGCAGGAAACTTaGAAAAGGAGGGCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GNLTEIKIFSTGYIPCQERQQET*KRRAWP Trigger: AGGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGTCT...CTCTTGGCATGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CAA 90 bp | CCTACTAAAACAATACAGAGGGCAATACATAAGACAGCAGGAAACTaGAAAAAGGAGGGCCTGGCCTCTTGCAAGAAGAGATCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PTKTIQRAIHKTAGN*KKEGLASCKKRSLK Trigger: CTTCAGAGATCTCTTCTTGCAAGAGGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGTCTTATGTATTGCCCTCTGTATTGTTTTAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCATGCCAAGAGTTTAATCCTACGCTTTaGCCACCTGCTCGAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: GNLTEIKIFSTGYIPCQEFNPTL*PPARET Trigger: GGTCTCTCGAGCAGGTGGGCAAAGCGTAGGATTAAA...CTCTTGGCATGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | TTACCCTATTGTAAGTGCCTTTTAAGATTGAATTCTGACATAGCTAAAGCCCCCTTGATTTGTTACATCTaGTGCTCACAGCCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPYCKCLLRLNSDIAKAPLICYI*CSQPEL Trigger: CAGCTCTGGCTGTGAGCATCAGATGTAACAAATCAA...GGGGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTACAATAGGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCATGCCAAGAGACACTACATTATTCTTaGGGCCTGCCAAGAGTAATT | + |
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Preference number: 2 (lower is better) Translates to: GNLTEIKIFSTGYIPCQETLHYS*GLPRVI Trigger: AATTACTCTTGGCAGGCCTCAAGAATAATGTAGTGT...CTCTTGGCATGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CAA 90 bp | GAAACTGGAACTAGCTCTGGTGTTACAGTCTGCTCATTACTCCCATaGTATGCATACAAGTATGCTTTGTGTCAAAGAGAATTCATAAAG | + |
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Preference number: 2 (lower is better) Translates to: ETGTSSGVTVCSLLP*YAYKYALCQREFIK Trigger: CTTTATGAATTCTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCAGACTGTAACACCAGAGCTAGTTCCAGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGTACAGGCTACATTCCATGCCAAGAGCAAGTTGAGATACTCTCCTGATCATTTATCTAGTTCCTaGAAATTCCTTTCGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SLVQATFHAKSKLRYSPDHLSSS*KFLSKS Trigger: TGACTTCGAAAGGAATTTGCAGGAACTAGATAAATG...ATCAGGAGAGTATCTCAACTTGCTCTTGGCATGGAATGTAGCCTGTACTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTCATTACTCCCATTGTATGCATACAAGTATGCTTTGTGTCAAAGAGAATTCGTAGCTTCCTGGCGGTaGCATTTTACACAATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: CSLLPLYAYKYALCQREFVASWR*HFTQFS Trigger: AGAAAATTGTGTAAAATGGCACCGCCAGGAAGCTAC...GAATTCTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172321.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCACATTTATCTAGTTCCTaGAAATTCCTTTCGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: KEPGNLTEIKIFSTGYIPHLSSS*KFLSKS Trigger: TGACTTCGAAAGGAATTTGCAGGAACTAGATAAATG...TGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 72 bp | CATGGGAGAGGGCCTGCCTGCAGCTTCTCTGATGCCTaGGTCGTATCTGTCAAACCTCACCCTCTGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: HGRGPACSFSDA*VVSVKPHPLLS Trigger: GGACAGCAGAGGGTGAGGTTTGACAGATACGACTCAGGCATCAGAGAAGCTGCAGGCAGGCCCTCTCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 72 bp | AGATCCCTGCACCAGTCAGTGAGGGTTCCTCTAGCTTaGGTTCTCTCCGGGTCTACAGATCCTGCTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RSLHQSVRVPLA*VLSGSTDPAVS Trigger: GGAAACAGCAGGATCTGTAGACCCGGAGAGAACCCAAGCTAGAGGAACCCTCACTGACTGGTGCAGGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR GCA 72 bp | GCGTCTTCCTCCACGTCTAGTCTGCCTCTTTACATCTaGCTTCCGGGGGTGCTAAGGAATGTTCTCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: ASSSTSSLPLYI*LPGVLRNVLQG Trigger: TCCTTGGAGAACATTCCTTAGCACCCCCGGAAGGCAGATGTAAAGAGGCAGACTAGACGTGGAGGAAGACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 72 bp | TACAGGAATTTCACAGTGGTGGTTTGCCACGCACTCTaGTGGAGTCAGCTTGACAGGCGAAAGCTTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: YRNFTVVVCHAL*WSQLDRRKLGS Trigger: GCTTCCAAGCTTTCGCCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 72 bp | AAAAGGAGGGCCTGGCCTCTTGCAAGAAGAGATCTCTaGAGTCATGTAGTAGTTGTAGCTTCCTGGCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: KRRAWPLARRDL*SHVVVVASWRC Trigger: GCACCGCCAGGAAGCTACAACTACTACATGACTTCAGAGATCTCTTCTTGCAAGAGGCCAGGCCCTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 72 bp | TACTGTGAGAGGAAATTAGCTCTGGGGCAGCAGTTTTaGCAGTCAGCGTCTTCCTCCACGTCTAGTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: YCERKLALGQQF*QSASSSTSSLP Trigger: AGGCAGACTAGACGTGGAGGAAGACGCTGACTGTCAAAACTGCTGCCCCAGAGCTAATTTCCTCTCACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CCA 72 bp | AGGAATTTCACAGTGGTGGTTTGCCACGCACTCTGGTaGAGTCAGCTTGACAGGCGAAAGCTTGGAAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: RNFTVVVCHALW*SQLDRRKLGSY Trigger: ATAGCTTCCAAGCTTTCGCCTGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGAACAGATTCATACCACTaGCTTCCTTGCAGTTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SGESHALQLGQFDKRKLGTDSYH*LPCSLR Trigger: CCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGT...TCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR TCA 72 bp | CAGACACAGGGACCCAGAGGGTCTGCGGCAGTGGTTTaGATAGCTTTAATTGGATTCTACTACAGCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QTQGPRGSAAVV*IALIGFYYSLQ Trigger: CTGAAGGCTGTAGTAGAATCCAATTAAAGCTATTCAAACCACTGCCGCAGACCCTCTGGGTCCCTGTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | CAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGAAGCTaGCCACAAGGAAAAGAGTTTCACAGAAATTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QLGQFDKRKLGS*PQGKEFHRNSL Trigger: GAGGGAATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CCA 72 bp | CAGAGGGTCTGCGGCAGTGGTTTGAATAGCTTTAATTaGATTCTACTACAGCCTTCAGTGACAGAGGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QRVCGSGLNSFN*ILLQPSVTEGS Trigger: ACTCCCCTCTGTCACTGAAGGCTGTAGTAGAATCCAATTAAAGCTATTCAAACCACTGCCGCAGACCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATAAGACAGCAGGAAACTaGAAAAAGGAGGGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FDKRKLGSCPQGKEFHRNKTAGN*KKEGLA Trigger: GGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGTCTT...ATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | CTGATGCCTGAGTCGTATCTGTCAAACCTCACCCTCTaGTGTCCAAGAGCAGAGAGAATCATAATTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LMPESYLSNLTL*CPRAERIIILQ Trigger: CTGTAGAATTATGATTCTCTCTGCTCTTGGACAGCAGAGGGTGAGGTTTGACAGATACGACTCAGGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | ACAGCAGGAAACTTGAAAAAGGAGGGCCTGGCCTCTTaGAAGAAGAGATCTCTGAAGTCATGTAGTAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TAGNLKKEGLAS*KKRSLKSCSSC Trigger: ACAACTACTACATGACTTCAGAGATCTCTTCTTGCAAGAGGCCAGGCCCTCCTTTTTCAAGTTTCCTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | GACCCCGAAACTGGAACTAGCTCTGGTGTTACAGTCTaGTCATTACTCCCATTGTATGCATACAAGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPETGTSSGVTV*SLLPLYAYKYA Trigger: AGCATACTTGTATGCATACAATGGGAGTAATGAGCAGACTGTAACACCAGAGCTAGTTCCAGTTTCGGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CCA 72 bp | AGAGAGAATCATAATTCTACAGGAATTTCACAGTGGTaGTTTGCCACGCACTCTGGTGGAGTCAGCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: RENHNSTGISQW*FATHSGGVSLT Trigger: TGTCAAGCTGACTCCACCAGAGTGCGTGGCAAACCACCACTGTGAAATTCCTGTAGAATTATGATTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR TCA 72 bp | CTAAAGGCAGTTCTCCTGACTTTGATTTGTTACATCTaGTGCTCACAGCCAGAGCTGAGCAGATCACAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LKAVLLTLICYI*CSQPELSRSQI Trigger: AATCTGTGATCTGCTCAGCTCTGGCTGTGAGCATCAGATGTAACAAATCAAAGTCAGGAGAACTGCCTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | GCTGAGCAGATCACAGATTCATACCACTTGCTTCCTTaGAGTTTGAGGCACAAGCATGCTATACTAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: AEQITDSYHLLP*SLRHKHAILKT Trigger: TGTCTTTAGTATAGCATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGTGATCTGCTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTAGTACAGGCTACATTCCATGCCAAGAGCAAGTTGAGATACTCTCCTGATACAGATTCATACCACTaGCTTCCTTGCAGTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLVQATFHAKSKLRYSPDTDSYH*LPCSLR Trigger: CCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGT...ATCAGGAGAGTATCTCAACTTGCTCTTGGCATGGAATGTAGCCTGTACTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTTAATCCTACGCGTCTGCGGCAGTGGTTaGAATAGCTTTAATTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: IQIQRLSCVHLFVSLILRVCGSG*NSFNWI Trigger: AATCCAATTAAAGCTATTCAAACCACTGCCGCAGAC...GCGTAGGATTAAACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTGCAGAAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCCATGCCAAGAGCAAGTaGAGATACTCTCCTGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLQKEPGNLTEIKIFSTGHAKSK*RYSPDK Trigger: TTTATCAGGAGAGTATCTCAACTTGCTCTTGGCATG...GCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTTCTGCAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATTCTCCTGACTTTGATTaGTTACATCTGATGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FDKRKLGSCPQGKEFHRNSPDFD*LHLMLT Trigger: TGTGAGCATCAGATGTAACAAATCAAAGTCAGGAGA...ATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR GCA 72 bp | CTCTGGTGTTACAGTCTGCTCATTACTCCCATTGTATaGATACAAGTATGCTTTGTGTCAAAGAGAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LWCYSLLITPIV*IQVCFVSKRIH Trigger: ATGAATTCTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCAGACTGTAACACCAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CCA 72 bp | CTTCAGGTTTTTATTGCCTATTATTTGTTACTTATATaGTACTGTGAGAGGAAATTAGCTCTGGGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQVFIAYYLLLI*YCERKLALGQQ Trigger: CTGCTGCCCCAGAGCTAATTTCCTCTCACAGTACCATATAAGTAACAAATAATAGGCAATAAAAACCTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGATCTGGTCTCTGGGGCTaGGATGTCCCGGTAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGESHALQLGQFDKRKLGSGLWG*DVPVGC Trigger: GCACCCTACCGGGACATCTCAGCCCCAGAGACCAGA...TCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR GCA 90 bp | ACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGAGCCAAGAGCATCCTTaGGAAACGGACCCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSWVSLTSGSLEAAHKSQEHP*ETDPNT Trigger: AGTGTTGGGGTCCGTTTCGCAAGGATGCTCTTGGCT...CTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CAA 72 bp | AGTCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTaGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLVKATLSSWVS*TSGSLEAAHKE Trigger: TTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | ATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTTAATCCTACGCTCCGGTCCCCTTCACTaGGCCACGGGGCCGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: IQIQRLSCVHLFVSLILRSGPLH*ATGPTI Trigger: GATTGTCGGCCCCGTGGCTCAGTGAAGGGGACCGGA...GCGTAGGATTAAACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTACCTGGCACTAGGCTGATGATCCTAGGCAGGGCTGATAATCTCTATTCTGGTCTCTGGGGCTaGGATGTCCCGGTAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLPGTRLMILGRADNLYSGLWG*DVPVGC Trigger: GCACCCTACCGGGACATCTCAGCCCCAGAGACCAGA...ATAGAGATTATCAGCCCTGCCTAGGATCATCAGCCTAGTGCCAGGTAAGAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGATTGGAGCTGGAGTTCTaGAAGAGCCAAGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGESHALQLGQFDKRKLGLELEF*KSQEHP Trigger: AGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAA...TCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATTCCCTCCTGGAACAACGAAGGTGGGCTaGGGGAGTTTGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EAWKLPTRKRVSQKFPPGTTKVG*GSLELE Trigger: CTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGT...TCCAGGAGGGAATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGGGGGAGTTTGGAGCTaGAGTTCTGGAAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTGGVWS*SSGRAK Trigger: CTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCC...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | CTACAGATCCTGCTGTTTCCACCTCTGATCTTCAGCTTCTTCTATATGATGGGCACAACGAAGGTGGGCTaGGGGAGTTTGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQILLFPPLIFSFFYMMGTTKVG*GSLELE Trigger: CTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGT...GCCCATCATATAGAAGAAGCTGAAGATCAGAGGTGGAAACAGCAGGATCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATTCCCTCCTGGAAGCCAAGAGCATCCTTaGGAAACGGACCCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: EAWKLPTRKRVSQKFPPGSQEHP*ETDPNT Trigger: AGTGTTGGGGTCCGTTTCGCAAGGATGCTCTTGGCT...TCCAGGAGGGAATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR GCA 90 bp | ATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTTAATCCTACGCGCGGCCTGGGACATTTaGAAACACGCTTTCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQIQRLSCVHLFVSLILRAAWDI*KHAFGS Trigger: GGAGCCGAAAGCGTGTTTGCAAATGTCCCAGGCCGC...GCGTAGGATTAAACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066747.14 |
||
| 3UTR CAA 72 bp | AGGTGCACCGCTAAAGGCAGTTCTCCTGACTTTGATTaGTTACATCTGATGCTCACAGCCAGAGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCTAKGSSPDFD*LHLMLTARAEQ Trigger: CTGCTCAGCTCTGGCTGTGAGCATCAGATGTAACAAATCAAAGTCAGGAGAACTGCCTTTAGCGGTGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CAA 72 bp | ACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTaGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSWVSLTSGS*EAAHKEKSFTE Trigger: TTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCTATCTTGTTGTGGGATaGAGCCATATAGACAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESHALQLGQFDKRKLGSCYLVVG*SHIDNE Trigger: TTCGTTGTCTATATGGCTTCATCCCACAACAAGATA...GCAGCTTCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | ATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTTAATCCTACGCGGGGGAGTTTGGAGCTaGAGTTCTGGAAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQIQRLSCVHLFVSLILRGGVWS*SSGRAK Trigger: CTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCC...GCGTAGGATTAAACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCTGCTCATTACTCCCATTGTATGCATACAAGTATGCTTTGTGTCAAAGAGGCTTGCCTTCCTGTCTaGCTAGCGGCCTGGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QSAHYSHCMHTSMLCVKEACLPV*LAAWDI Trigger: AATGTCCCAGGCCGCTAGTCAGACAGGAAGGCAAGC...CTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066747.14 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATTGTTCCAAGATCCCAGATAACAGCAAGGAGTTTAACCTATTCAGTATATAGACAACGAAGGTaGGCTGGGGGAGTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APIVPRSQITARSLTYSVYRQRR*AGGVWS Trigger: GCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATA...TACTGAATAGGTTAAACTCCTTGCTGTTATCTGGGATCTTGGAACAATGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGCTCATTACTCCCATTGTATGCATACAAGTATGCTTTGTGTCAAAGAGTGGGCTGGGGGAGTTTaGAGCTGGAGTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSAHYSHCMHTSMLCVKEWAGGV*SWSSGR Trigger: TCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCA...CTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CAA 72 bp | ACAGCCAGAGCTGAGCAGATCACAGATTCATACCACTaGCTTCCTTGCAGTTTGAGGCACAAGCATGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: TARAEQITDSYH*LPCSLRHKHAI Trigger: TATAGCATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGTGATCTGCTCAGCTCTGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCTGGCGTTCCCTCTAAACCATAAATTAATTTTCCACTCCCGCGTTAGTTATTCGTGTCCCTCATaGCAGAAAACAGTTTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: WSLAFPLNHKLIFHSRVSYSCPS*QKTVST Trigger: CGTCGAAACTGTTTTCTGCCATGAGGGACACGAATA...ACTAACGCGGGAGTGGAAAATTAATTTATGGTTTAGAGGGAACGCCAGACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | TTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAGAAATCACTTTCTGAAGGACTaGCACGACAGAACTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FDKRKLGSCPQGKEFHRNHFLKD*HDRTEV Trigger: TACTTCAGTTCTGTCGTGCCAGTCCTTCAGAAAGTG...ATTTCTGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | CCTGACATTACATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTCACTTTCTGAAGGACTaGCACGACAGAACTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDITFRFNASPVCICLSVHFLKD*HDRTEV Trigger: TACTTCAGTTCTGTCGTGCCAGTCCTTCAGAAAGTG...AACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAATGTAATGTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCATTGGAGCTGGAGTTCTaGAAGAGCCAAGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPGNLTEIKIFSTGYIPLELEF*KSQEHP Trigger: AGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAA...TGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTCATTACTCCCATTGTATGCATACAAGTATGCTTTGTGTCAAAGAGAATTTATAGACAACGAAGGTaGGCTGGGGGAGTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLITPIVCIQVCFVSKRIYRQRR*AGGVWS Trigger: GCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATA...AATTCTCTTTGACACAAAGCATACTTGTATGCATACAATGGGAGTAATGAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTAGTACAGGCTACATTCCATGCCAAGAGCAAGTTGAGATACTCTCCTGATTATTCGTGTCCCTCATaGCAGAAAACAGTTTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLVQATFHAKSKLRYSPDYSCPS*QKTVST Trigger: CGTCGAAACTGTTTTCTGCCATGAGGGACACGAATA...ATCAGGAGAGTATCTCAACTTGCTCTTGGCATGGAATGTAGCCTGTACTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CAA 72 bp | CAGATCACAGATTCATACCACTTGCTTCCTTGCAGTTaGAGGCACAAGCATGCTATACTAAAGACACATACC | + |
|
Preference number: 4 (lower is better) Translates to: QITDSYHLLPCS*RHKHAILKTHT Trigger: GGTATGTGTCTTTAGTATAGCATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTATGAATCTGTGATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| 3UTR CAA 72 bp | TCTTTAGTACAGGCTACATTCCATGCCAAGAGCAAGTaGAGATACTCTCCTGATAAATGGGGATTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVQATFHAKSK*RYSPDKWGFSR Trigger: TCTGGAGAATCCCCATTTATCAGGAGAGTATCTCAACTTGCTCTTGGCATGGAATGTAGCCTGTACTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR TCA 90 bp | CCTGACATTACATTCAGATTCAACGCCTCTCCTGTGTGCATCTGTTTGTCAGTTTATCTTGTTGTGGGATaGAGCCATATAGACAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDITFRFNASPVCICLSVYLVVG*SHIDNE Trigger: TTCGTTGTCTATATGGCTTCATCCCACAACAAGATA...AACTGACAAACAGATGCACACAGGAGAGGCGTTGAATCTGAATGTAATGTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCAGATTCCGGCCAAGGGTaGCCAGATGTAAATATCACA | + |
|
Preference number: 4 (lower is better) Translates to: KEPGNLTEIKIFSTGYIPDSGQG*PDVNIT Trigger: TGTGATATTTACATCTGGGCACCCTTGGCCGGAATC...TGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| 3UTR CAA 72 bp | GGACCATGGGTGACTCTTAGTTCCTTCAGGTTTTTATaGCCTATTATTTGTTACTTATATGGTACTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GPWVTLSSFRFL*PIICYLYGTVR Trigger: TCTCACAGTACCATATAAGTAACAAATAATAGGCAATAAAAACCTGAAGGAACTAAGAGTCACCCATGGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS GCA 90 bp | GATGATCAAGGACAGCAGAAGGGCCACGCAGATTCCGGCCAAGGGTaGCCAGATGTAAATATCACAGGCGAAGTCCAATCCGGTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: DDQGQQKGHADSGQG*PDVNITGEVQSGPL Trigger: AAGGGGACCGGATTGGACTTCGCCTGTGATATTTACATCTGGGCACCCTTGGCCGGAATCTGCGTGGCCCTTCTGCTGTCCTTGATCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 90 bp | ATGAAGCCATATAGACAACGAAGGTGGGCTGGGGGAGTTTGGAGCTaGAGTTCTGGAAGAGCCAAGAGCATCCTTGCGAAACGGACCCCA | + |
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Preference number: 5 (lower is better) Translates to: MKPYRQRRWAGGVWS*SSGRAKSILAKRTP Trigger: TGGGGTCCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATATGGCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 90 bp | TGTGGGATGAAGCCATATAGACAACGAAGGTGGGCTGGGGGAGTTTaGAGCTGGAGTTCTGGAAGAGCCAAGAGCATCCTTGCGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: CGMKPYRQRRWAGGV*SWSSGRAKSILAKR Trigger: CCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATATGGCTTCATCCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 90 bp | CCCACGTTATCTTGTTGTGGGATGAAGCCATATAGACAACGAAGGTaGGCTGGGGGAGTTTGGAGCTGGAGTTCTGGAAGAGCCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PTLSCCGMKPYRQRR*AGGVWSWSSGRAKS Trigger: GCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATATGGCTTCATCCCACAACAAGATAACGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS-3UTR CAA 90 bp | TCTGGTGAAAGCCACGCTCTCCAGTTGGGTCAGTTTGACAAGCGGAAGCTTGGACGGCGTCCATTTTCTTaGGAAAGATTCGGAGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SGESHALQLGQFDKRKLGRRPFS*ERFGVR Trigger: CCGAACTCCGAATCTTTCCAAAGAAAATGGACGCCG...TCCAAGCTTCCGCTTGTCAAACTGACCCAACTGGAGAGCGTGGCTTTCACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS-3UTR CAA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACAAGCGGCCTGGGACATTaGCAAACACGCTTTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTSGLGH*QTRFRL Trigger: GAGCCGAAAGCGTGTTTGCAAATGTCCCAGGCCGCT...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066747.14 |
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| CDS TCA 90 bp | CCTTGCGAAACGGACCCCAACACTTCACATACCAGGTCCACCTTCTaGCCAAGTTCGGCGTCCATTTTCTTTGGAAAGATTCGGAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: PCETDPNTSHTRSTF*PSSASIFFGKIRSS Trigger: CGAACTCCGAATCTTTCCAAAGAAAATGGACGCCGAACTTGGTCAGAAGGTGGACCTGGTATGTGAAGTGTTGGGGTCCGTTTCGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS-3UTR CAA 90 bp | GTCAGTTTGACAAGCGGAAGCTTGGAAGCTGCCCACAAGGAAAAGAGTTTCACACGGCGTCCATTTTCTTaGGAAAGATTCGGAGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: VSLTSGSLEAAHKEKSFTRRPFS*ERFGVR Trigger: CCGAACTCCGAATCTTTCCAAAGAAAATGGACGCCG...TGTGAAACTCTTTTCCTTGTGGGCAGCTTCCAAGCTTCCGCTTGTCAAACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS TCA 90 bp | GACTGGCACGACAGAACTGAAGTACATCACCGAGTTGCTGATGACTaGGCAGAAATAGTAGCCTTCGTTTTCCTTGCTGAACTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DWHDRTEVHHRVADD*AEIVAFVFLAELVQ Trigger: CTGAACAAGTTCAGCAAGGAAAACGAAGGCTACTATTTCTGCTCAGTCATCAGCAACTCGGTGATGTACTTCAGTTCTGTCGTGCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS-3UTR CAA 90 bp | TACCACTTGCTTCCTTGCAGTTTGAGGCACAAGCATGCTATACTAAAGACACATAAGTACATCACCGAGTaGCTGATGACTGAGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: YHLLPCSLRHKHAILKTHKYITE*LMTEQK Trigger: TTTCTGCTCAGTCATCAGCAACTCGGTGATGTACTT...ATGTGTCTTTAGTATAGCATGCTTGTGCCTCAAACTGCAAGGAAGCAAGTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS-3UTR CAA 90 bp | AAAGAGCCTGGGAATCTCACTGAGATAAAAATCTTTAGTACAGGCTACATTCCAAAGTACATCACCGAGTaGCTGATGACTGAGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KEPGNLTEIKIFSTGYIPKYITE*LMTEQK Trigger: TTTCTGCTCAGTCATCAGCAACTCGGTGATGTACTT...TGGAATGTAGCCTGTACTAAAGATTTTTATCTCAGTGAGATTCCCAGGCTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS TCA 72 bp | GAGCCACGGGGCCGACAATCTTCTGGTCTCTGGGGCTaGGATGTCCCGGTAGGGTGCACAGGTGAGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: EPRGRQSSGLWG*DVPVGCTGEGV Trigger: AACTCCCTCACCTGTGCACCCTACCGGGACATCTCAGCCCCAGAGACCAGAAGATTGTCGGCCCCGTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | ACGAAGGTGGGCTGGGGGAGTTTGGAGCTGGAGTTCTaGAAGAGCCAAGAGCATCCTTGCGAAACGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: TKVGWGSLELEF*KSQEHPCETDP Trigger: GGGGTCCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS TCA 72 bp | TCTCTGGGGCTGAGATGTCCCGGTAGGGTGCACAGGTaGGGGAGTTCGCAGCACTGGCTTGGTAGTAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SLGLRCPGRVHR*GSSQHWLGSSR Trigger: TCTACTACTACCAAGCCAGTGCTGCGAACTCCCTCACCTGTGCACCCTACCGGGACATCTCAGCCCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS TCA 72 bp | AATATCACAGGCGAAGTCCAATCCGGTCCCCTTCACTaGGCCACGGGGCCGACAATCTTCTGGTCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NITGEVQSGPLH*ATGPTIFWSLG Trigger: CCCCAGAGACCAGAAGATTGTCGGCCCCGTGGCTCAGTGAAGGGGACCGGATTGGACTTCGCCTGTGATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS GCA 72 bp | GGACAGCAGAAGGGCCACGCAGATTCCGGCCAAGGGTaGCCAGATGTAAATATCACAGGCGAAGTCCAATCC | + |
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Preference number: 6 (lower is better) Translates to: GQQKGHADSGQG*PDVNITGEVQS Trigger: GGATTGGACTTCGCCTGTGATATTTACATCTGGGCACCCTTGGCCGGAATCTGCGTGGCCCTTCTGCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CAA 90 bp | CTGGGGGAGTTTGGAGCTGGAGTTCTGGAAGAGCCAAGAGCATCCTaGCGAAACGGACCCCAACACTTCACATACCAGGTCCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGEFGAGVLEEPRAS*RNGPQHFTYQVHLL Trigger: CAGAAGGTGGACCTGGTATGTGAAGTGTTGGGGTCCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS GCA 72 bp | TTGGAGCTGGAGTTCTGGAAGAGCCAAGAGCATCCTTaGGAAACGGACCCCAACACTTCACATACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LELEFWKSQEHP*ETDPNTSHTRS Trigger: GGACCTGGTATGTGAAGTGTTGGGGTCCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | GTCCACCTTCTGACCAAGTTCGGCGTCCATTTTCTTTaGAAAGATTCGGAGTTCGGGTGCCTGTGGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: VHLLTKFGVHFL*KDSEFGCLWLS Trigger: GCTAAGCCACAGGCACCCGAACTCCGAATCTTTCCAAAGAAAATGGACGCCGAACTTGGTCAGAAGGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | TATAGACAACGAAGGTGGGCTGGGGGAGTTTGGAGCTaGAGTTCTGGAAGAGCCAAGAGCATCCTTGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: YRQRRWAGGVWS*SSGRAKSILAK Trigger: TTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | AAGCCATATAGACAACGAAGGTGGGCTGGGGGAGTTTaGAGCTGGAGTTCTGGAAGAGCCAAGAGCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: KPYRQRRWAGGV*SWSSGRAKSIL Trigger: AAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATATGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CAA 72 bp | TTTGGAGCTGGAGTTCTGGAAGAGCCAAGAGCATCCTaGCGAAACGGACCCCAACACTTCACATACCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: FGAGVLEEPRAS*RNGPQHFTYQV Trigger: GACCTGGTATGTGAAGTGTTGGGGTCCGTTTCGCAAGGATGCTCTTGGCTCTTCCAGAACTCCAGCTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS TCA 72 bp | ATTCAGCTTCTCGTCCCACGTTATCTTGTTGTGGGATaGAGCCATATAGACAACGAAGGTGGGCTGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: IQLLVPRYLVVG*SHIDNEGGLGE Trigger: CTCCCCCAGCCCACCTTCGTTGTCTATATGGCTTCATCCCACAACAAGATAACGTGGGACGAGAAGCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS GCA 72 bp | GGCGTCCATTTTCTTTGGAAAGATTCGGAGTTCGGGTaGCTGTGGCTTAGCTTCTCCACTCCCCAGGATAAT | + |
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Preference number: 6 (lower is better) Translates to: GVHFLWKDSEFG*LWLSFSTPQDN Trigger: ATTATCCTGGGGAGTGGAGAAGCTAAGCCACAGGCACCCGAACTCCGAATCTTTCCAAAGAAAATGGACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | TCTTGTTGTGGGATGAAGCCATATAGACAACGAAGGTaGGCTGGGGGAGTTTGGAGCTGGAGTTCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SCCGMKPYRQRR*AGGVWSWSSGR Trigger: TCTTCCAGAACTCCAGCTCCAAACTCCCCCAGCCCACCTTCGTTGTCTATATGGCTTCATCCCACAACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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| CDS CCA 72 bp | TGGCTTGGTAGTAGTAGAGTTCACTTTCTGAAGGACTaGCACGACAGAACTGAAGTACATCACCGAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: WLGSSRVHFLKD*HDRTEVHHRVA Trigger: AGCAACTCGGTGATGTACTTCAGTTCTGTCGTGCCAGTCCTTCAGAAAGTGAACTCTACTACTACCAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066747.14 ENSMUST00000172321.3 |
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