Pregenerated sensors for CD86 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022901Ensembl transcript IDs: ENSMUST00000089620.11
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGACCTTTCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTaGTTTCTTCAGTGCTGCCTGCTAAGTTGTGACTTGCTGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PDLSRHFLKRAYSTS*FLQCCLLSCDLLAR Trigger: CCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGAAAGGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 90 bp | CATTTTCTTAAAAGGGCATACAGTACATCTTGCTTTCTTCAGTGCTaGCTGCTAAGTTGTGACTTGCTGGCCAGGCAGGTGGATTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: HFLKRAYSTSCFLQC*LLSCDLLARQVDSS Trigger: GGAAGAATCCACCTGCCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 90 bp | ATAAAATACCTGTTGAGCACCGAGGTGGCTGATATCTACATCCATTaGGACACACACTGGTCTATCTCTGACCTCTTGACTTTTCAATGG | + |
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Preference number: 1 (lower is better) Translates to: IKYLLSTEVADIYIH*DTHWSISDLLTFQW Trigger: CCATTGAAAAGTCAAGAGGTCAGAGATAGACCAGTGTGTGTCTCAATGGATGTAGATATCAGCCACCTCGGTGCTCAACAGGTATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 90 bp | GCCCTCCAGGGCCCTTTATGTAAAATGGAAACAACAATATTTTGCTaGTCAGACCTGCCAAAGTTCTCTTTAAGTCTGGGTGATGACTAT | + |
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Preference number: 1 (lower is better) Translates to: ALQGPLCKMETTIFC*SDLPKFSLSLGDDY Trigger: ATAGTCATCACCCAGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATTTTACATAAAGGGCCCTGGAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 90 bp | ATAGCCCTCCAGGGCCCTTTATGTAAAATGGAAACAACAATATTTTaGTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTGGGTGATGAC | + |
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Preference number: 1 (lower is better) Translates to: IALQGPLCKMETTIF*CSDLPKFSLSLGDD Trigger: GTCATCACCCAGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATTTTACATAAAGGGCCCTGGAGGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGAGTGCTCTTGGCCTATaGGTGTGCACTGAGTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: TSMSPASGIVYSPPGPFMSALGL*VCTELN Trigger: GTTTAACTCAGTGCACACTCATAGGCCAAGAGCACT...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR CAA 90 bp | TACAGTACATCTTGCTTTCTTCAGTGCTGCCTGCTAAGTTGTGACTaGCTGGCCAGGCAGGTGGATTCTTCCAGTATCTGTGGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: YSTSCFLQCCLLSCD*LARQVDSSSICGSP Trigger: TGGGCTGCCACAGATACTGGAAGAATCCACCTGCCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGGATATCTACATCCATTaGGACACACACTGGTCTATC | + |
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Preference number: 2 (lower is better) Translates to: TSMSPASGIVYSPPGPFMDIYIH*DTHWSI Trigger: GATAGACCAGTGTGTGTCTCAATGGATGTAGATATC...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR TCA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTACACAAGCCATGAGCTaGAAGAGTCCTAGCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: NGNNNILLLRPAKVLFKSTQAMS*KSPSLS Trigger: TGAAAGGCTAGGACTCTTTCAGCTCATGGCTTGTGT...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR TCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTCATATTTGTGTTTCTTaGTTTGCCAGCACTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FQWTGQISPSINICWLDSHICVS*FASTEN Trigger: GTTCTCAGTGCTGGCAAATCAAGAAACACAAATATG...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR GCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTAGAACTCTGTGCTGTTaGTGTCACCTGTATATTACT | + |
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Preference number: 2 (lower is better) Translates to: FQWTGQISPSINICWLDSRTLCC*CHLYIT Trigger: AGTAATATACAGGTGACAGCAACAGCACAGAGTTCT...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR GCA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTGAGTGTTGTGATTTCTaGTTTCCCTCCTTCCACACA | + |
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Preference number: 2 (lower is better) Translates to: NGNNNILLLRPAKVLFKSECCDF*FPSFHT Trigger: TGTGTGGAAGGAGGGAAAGCAGAAATCACAACACTC...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CCA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTCCAAAATGTTATTCCTaGGAAAGAAGCCATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: NGNNNILLLRPAKVLFKSPKCYS*ERSHFS Trigger: ACTGAAATGGCTTCTTTCCCAGGAATAACATTTTGG...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR TCA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATTCAAGTAGGAGAGATTaGTCCAAAATGTTATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYSSRRD*SKMLFL Trigger: CAGGAATAACATTTTGGATCAATCTCTCCTACTTGA...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTTGCTGTTTTAAGATAGCAACACGAACACATCAAATAACATCACCAAATATAAGTATGCAAGTGTaGAAGACAGATAAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ALCCFKIATRTHQITSPNISMQV*KTDKSQ Trigger: CTGGCTTTTATCTGTCTTGCACACTTGCATACTTAT...ATTTGGTGATGTTATTTGATGTGTTCGTGTTGCTATCTTAAAACAGCAAAGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CCA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATCATTGCCCAAAAACTTaGAAAGGAAACAGGATAAAA | + |
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Preference number: 2 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYHCPKT*KGNRIK Trigger: TTTTATCCTGTTTCCTTTCCAAGTTTTTGGGCAATG...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGTTGGCTGTCTTATCCTaGCACAGCATTCTCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: TSMSPASGIVYSPPGPFMLAVLS*HSILQT Trigger: GGTCTGGAGAATGCTGTGCAAGGATAAGACAGCCAA...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGATCATAAAATACCTGTaGAGCACCGAGGTGGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: TSMSPASGIVYSPPGPFMIIKYL*STEVAD Trigger: ATCAGCCACCTCGGTGCTCAACAGGTATTTTATGAT...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | AAAAGGGCATACAGTACATCTTGCTTTCTTCAGTGCTaGCTGCTAAGTTGTGACTTGCTGGCCAGGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KRAYSTSCFLQC*LLSCDLLARQV Trigger: CACCTGCCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | CTGTTGAGCACCGAGGTGGCTGATATCTACATCCATTaGGACACACACTGGTCTATCTCTGACCTCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: LLSTEVADIYIH*DTHWSISDLLT Trigger: AGTCAAGAGGTCAGAGATAGACCAGTGTGTGTCTCAATGGATGTAGATATCAGCCACCTCGGTGCTCAACAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | CTTAAAAGGGCATACAGTACATCTTGCTTTCTTCAGTaGTGCCTGCTAAGTTGTGACTTGCTGGCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LKRAYSTSCFLQ*CLLSCDLLARQ Trigger: CTGCCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCCCTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | TCCATTGAGACACACACTGGTCTATCTCTGACCTCTTaGCTTTTCAATGGACTGGGCAGATCAGTCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SIETHTGLSLTS*LFNGLGRSVLP Trigger: TGGAAGGACTGATCTGCCCAGTCCATTGAAAAGTCAAGAGGTCAGAGATAGACCAGTGTGTGTCTCAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | TGTCTCCTGGTTTTGAGTGCTTGGCTGTCTTATCCTTaGACAGCATTCTCCAGACCTTTCCAGGCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: CLLVLSAWLSYP*TAFSRPFQAFS Trigger: AGAAAATGCCTGGAAAGGTCTGGAGAATGCTGTGCAAGGATAAGACAGCCAAGCACTCAAAACCAGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | CTGCAGACTACAGTAGTCTCAGAGTGTTGTGATTTCTaGTTTCCCTCCTTCCACACAAGCCATGAGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LQTTVVSECCDF*FPSFHTSHELK Trigger: TTTCAGCTCATGGCTTGTGTGGAAGGAGGGAAAGCAGAAATCACAACACTCTGAGACTACTGTAGTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | TGCCGTATAGATACACTATGTGCTTTCAGCATTAGTTaGTCTTTGTCCTTTGAAAGGCCAAGCCACACCCAC | + |
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Preference number: 3 (lower is better) Translates to: CRIDTLCAFSIS*SLSFERPSHTH Trigger: GTGGGTGTGGCTTGGCCTTTCAAAGGACAAAGAGCAACTAATGCTGAAAGCACATAGTGTATCTATACGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | TATCTACATCCATTGAGACACACACTGGTCTATCTCTaGCCTCTTGACTTTTCAATGGACTGGGCAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: YLHPLRHTLVYL*PLDFSMDWADQ Trigger: CTGATCTGCCCAGTCCATTGAAAAGTCAAGAGGTCAGAGATAGACCAGTGTGTGTCTCAATGGATGTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | TCCTGGGAAAGAAGCCATTTCAGTGCTCTTGGCCTATaGGTGTGCACTGAGTTAAACAAAGCAAGACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: SWERSHFSALGL*VCTELNKARQN Trigger: ATTTTGTCTTGCTTTGTTTAACTCAGTGCACACTCATAGGCCAAGAGCACTGAAATGGCTTCTTTCCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | ATTTGTTGGTTGGATTCTAGTGATGTCTCCTGGTTTTaGGTGCTTGGCTGTCTTATCCTTGCACAGCATTCT | + |
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Preference number: 3 (lower is better) Translates to: ICWLDSSDVSWF*VLGCLILAQHS Trigger: AGAATGCTGTGCAAGGATAAGACAGCCAAGCACTCAAAACCAGGAGACATCACTAGAATCCAACCAACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR GCA 72 bp | TCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTaGTTTCTTCAGTGCTGCCTGCTAAGTTGTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: SRHFLKRAYSTS*FLQCCLLSCDL Trigger: CAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGACCTTTCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTGCTTTCTCATTGTATTCATTATaGACCCTGATGGAGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LQTFPGIFLKGHTVHLAFSLYSL*TLMEGQ Trigger: CTGTCCCTCCATCAGGGTCAATAATGAATACAATGA...GAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGAAAGGTCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTGGCATACAGTACATCTaGCTTTCTTCAGTGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: NGNNNILLLRPAKVLFKSGIQYI*LSSVLP Trigger: AGGCAGCACTGAAGAAAGCAAGATGTACTGTATGCC...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTTCTATCTCTGACCTCTaGACTTTTCAATGGACTGGG | + |
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Preference number: 3 (lower is better) Translates to: NGNNNILLLRPAKVLFKSSISDL*TFQWTG Trigger: CCCAGTCCATTGAAAAGTCAAGAGGTCAGAGATAGA...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR TCA 72 bp | ATGGTTCCATATTTGTGTTTCTTGATTTGCCAGCACTaGGAACTCTGTGCTGTTGCTGTCACCTGTATATTA | + |
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Preference number: 3 (lower is better) Translates to: MVPYLCFLICQH*ELCAVAVTCIL Trigger: TAATATACAGGTGACAGCAACAGCACAGAGTTCTCAGTGCTGGCAAATCAAGAAACACAAATATGGAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGTATAAGTATATAAGTATGCAAGTGTGCAAGACAGATAAAAGCCAGTATGGGACACAATTGACATaGCCCAAAAACTTGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SRYKYISMQVCKTDKSQYGTQLT*PKNLER Trigger: CCTTTCCAAGTTTTTGGGCAATGTCAATTGTGTCCC...ATACTGGCTTTTATCTGTCTTGCACACTTGCATACTTATATACTTATACCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGTATAAGTATATAAGTATGCAAGTGTGCAAGACAGATAAAAGCCAGTATACATTGCCCAAAAACTaGGAAAGGAAACAGGATAAA | + |
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Preference number: 3 (lower is better) Translates to: SRYKYISMQVCKTDKSQYTLPKN*ERKQDK Trigger: TTTATCCTGTTTCCTTTCCAAGTTTTTGGGCAATGT...ATACTGGCTTTTATCTGTCTTGCACACTTGCATACTTATATACTTATACCTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CCA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGAGAACCAACTTTTGCTaGTCCTGCCAAAATACTACC | + |
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Preference number: 4 (lower is better) Translates to: TSMSPASGIVYSPPGPFMRTNFC*SCQNTT Trigger: GGTAGTATTTTGGCAGGACCAGCAAAAGTTGGTTCT...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR CAA 72 bp | TCTTGCTTTCTTCAGTGCTGCCTGCTAAGTTGTGACTaGCTGGCCAGGCAGGTGGATTCTTCCAGTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: SCFLQCCLLSCD*LARQVDSSSIC Trigger: ACAGATACTGGAAGAATCCACCTGCCTGGCCAGCAAGTCACAACTTAGCAGGCAGCACTGAAGAAAGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR CAA 72 bp | GGTTGGATTCTAGTGATGTCTCCTGGTTTTGAGTGCTaGGCTGTCTTATCCTTGCACAGCATTCTCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: GWILVMSPGFEC*AVLSLHSILQT Trigger: GGTCTGGAGAATGCTGTGCAAGGATAAGACAGCCAAGCACTCAAAACCAGGAGACATCACTAGAATCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR CAA 72 bp | CACTATGTGCTTTCAGCATTAGTTGCTCTTTGTCCTTaGAAAGGCCAAGCCACACCCACTCAGGTATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HYVLSALVALCP*KGQATPTQVSA Trigger: TGCAGATACCTGAGTGGGTGTGGCTTGGCCTTTCAAAGGACAAAGAGCAACTAATGCTGAAAGCACATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR GCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTTGGGCACGGCAGATATaGAGTCCCATTGAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: FQWTGQISPSINICWLDSWARQI*SPIEIS Trigger: GCTTATTTCAATGGGACTGCATATCTGCCGTGCCCA...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTGGAGGAAATCTTCATTaGCTCCGTTTCCAGAACACA | + |
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Preference number: 4 (lower is better) Translates to: FQWTGQISPSINICWLDSGGNLH*LRFQNT Trigger: TGTGTTCTGGAAACGGAGTCAATGAAGATTTCCTCC...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| 3UTR CAA 72 bp | TGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATaGTATTCATTATTGACCCTGATGGAGGGACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CAVAVTCILLRS*YSLLTLMEGQC Trigger: ACACTGTCCCTCCATCAGGGTCAATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTTTATTTCAGGTTCACTaGAGTTGGCGATCACTGACA | + |
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Preference number: 4 (lower is better) Translates to: FQWTGQISPSINICWLDSLFQVH*SWRSLT Trigger: TGTCAGTGATCGCCAACTTCAGTGAACCTGAAATAA...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR GCA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTTATCAAGTTTCTCTGTaGCCAAATAGTGCTCGTACA | + |
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Preference number: 4 (lower is better) Translates to: FQWTGQISPSINICWLDSYQVSL*PNSART Trigger: TGTACGAGCACTATTTGGGCACAGAGAAACTTGATA...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCTTTCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTGCTTTCTCTGTTAATGTCTGTTaGAGGATAATTGATCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LQTFPGIFLKGHTVHLAFSVNVC*RIIDPV Trigger: CACAGGATCAATTATCCTCCAACAGACATTAACAGA...GAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGAAAGGTCTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | GCTCTTTGCTGTTTTAAGATAGCAACACGAACACATCAAATAACATCACCAAATCTCAGGCTTATGTTTTaGGCCTTTGTAAATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ALCCFKIATRTHQITSPNLRLMF*AFVNGH Trigger: GTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAG...ATTTGGTGATGTTATTTGATGTGTTCGTGTTGCTATCTTAAAACAGCAAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTTGCATTTGGTTTTGCTaGAGCAATTTGGGGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: NGNNNILLLRPAKVLFKSCIWFC*SNLGFK Trigger: CTTGAACCCCAAATTGCTTCAGCAAAACCAAATGCA...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATGGAGATGGAAACTCTTaGGTGAAATTGAGAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYGDGNS*VKLRGL Trigger: CAAACCTCTCAATTTCACTCAAGAGTTTCCATCTCC...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATAAGTATATAAGTATGCAAGTGTGCAAGACAGATAAAAGCCAGTATAACTTTTGCTGGTCCTaGCAAAATACTACCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SRYKYISMQVCKTDKSQYNFCWS*QNTTSS Trigger: TGAGCTGGTAGTATTTTGGCAGGACCAGCAAAAGTT...ATACTGGCTTTTATCTGTCTTGCACACTTGCATACTTATATACTTATACCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR GCA 90 bp | GCTCTTTGCTGTTTTAAGATAGCAACACGAACACATCAAATAACATCACCAAATTACAGAACCAACTTTTaGTGGTCCTGCCAAAATACT | + |
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Preference number: 4 (lower is better) Translates to: ALCCFKIATRTHQITSPNYRTNF*WSCQNT Trigger: AGTATTTTGGCAGGACCAGCAAAAGTTGGTTCTGTA...ATTTGGTGATGTTATTTGATGTGTTCGTGTTGCTATCTTAAAACAGCAAAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATTTTCCTGTTACATTCTaGGCCAGTTTTATTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYFPVTF*ASFISG Trigger: ACCTGAAATAAAACTGGCTCAGAATGTAACAGGAAA...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR GCA 90 bp | CTGAGAACATTTTTGAATTCTGAGAAACTCTGCACTTCTTATTTCAGGCAAAGCTGCAGGTCAAATTTATaGCAGAATTTCCTGTTACAT | + |
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Preference number: 4 (lower is better) Translates to: LRTFLNSEKLCTSYFRQSCRSNL*QNFLLH Trigger: ATGTAACAGGAAATTCTGGCATAAATTTGACCTGCA...GCTTTGCCTGAAATAAGAAGTGCAGAGTTTCTCAGAATTCAAAAATGTTCTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CCA 90 bp | AATGGAAACAACAATATTTTGCTGCTCAGACCTGCCAAAGTTCTCTTTAAGTCTATACGTTTGAGGAGATaGAAACTCTTGAGTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: NGNNNILLLRPAKVLFKSIRLRR*KLLSEI Trigger: AATTTCACTCAAGAGTTTCCATCTCCTCAAACGTAT...AGACTTAAAGAGAACTTTGGCAGGTCTGAGCAGCAAAATATTGTTGTTTCCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGCCCATTGAAATAAGCTaGCGTCTCCACGGAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: TSMSPASGIVYSPPGPFMPIEIS*RLHGNS Trigger: GCTGTTTCCGTGGAGACGCAAGCTTATTTCAATGGG...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 90 bp | TCGTGCGGCCCAGGTACTTGGCATTCACACTATCAAGTTTCTCTGTaGCCAAATAGTGCTCGTACAGAACCAACTTTTGCTGGTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SCGPGTWHSHYQVSL*PNSARTEPTFAGPA Trigger: GGCAGGACCAGCAAAAGTTGGTTCTGTACGAGCACTATTTGGGCACAGAGAAACTTGATAGTGTGAATGCCAAGTACCTGGGCCGCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CCA 90 bp | GTAGAGTCCAGTTGTTCCTGTCAAAGCTCGTGCGGCCCAGGTACTTaGCATTCACACTATCAAGTTTCTCTGTGCCCAAATAGTGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: VESSCSCQSSCGPGT*HSHYQVSLCPNSAR Trigger: ACGAGCACTATTTGGGCACAGAGAAACTTGATAGTGTGAATGCCAAGTACCTGGGCCGCACGAGCTTTGACAGGAACAACTGGACTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 90 bp | GAACATTGTGAAGTCGTAGAGTCCAGTTGTTCCTGTCAAAGCTCGTaGGGCCCAGGTACTTGGCATTCACACTATCAAGTTTCTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: EHCEVVESSCSCQSS*GPGTWHSHYQVSLC Trigger: GCACAGAGAAACTTGATAGTGTGAATGCCAAGTACCTGGGCCGCACGAGCTTTGACAGGAACAACTGGACTCTACGACTTCACAATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | ACAAGCATGAGCCCTGCCAGCGGAATAGTCTATAGCCCTCCAGGGCCCTTTATGGTGAAATTGAGAGGTTaGGAGGAAATCTTCATTGAC | + |
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Preference number: 5 (lower is better) Translates to: TSMSPASGIVYSPPGPFMVKLRG*EEIFID Trigger: GTCAATGAAGATTTCCTCCAAACCTCTCAATTTCAC...CATAAAGGGCCCTGGAGGGCTATAGACTATTCCGCTGGCAGGGCTCATGCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | TGCAGTCCCATTGAAATAAGCTTGCGTCTCCACGGAAACAGCATCTaGGATCAGCAAGACTGTCACAAAGATAAGGATTGCCAAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CSPIEISLRLHGNSI*DQQDCHKDKDCQAH Trigger: ATGGGCTTGGCAATCCTTATCTTTGTGACAGTCTTGCTGATCTCAGATGCTGTTTCCGTGGAGACGCAAGCTTATTTCAATGGGACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | TGCTGGTCCTGCCAAAATACTACCAGCTCACTCAGGCTTATGTTTTaGGCCTTTGTAAATGGGCACGGCAGATATGCAGTCCCATTGAAA | + |
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Preference number: 5 (lower is better) Translates to: CWSCQNTTSSLRLMF*AFVNGHGRYAVPLK Trigger: TTTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTGGTAGTATTTTGGCAGGACCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 90 bp | ACTCAGGCTTATGTTTTGAGCCTTTGTAAATGGGCACGGCAGATATaGAGTCCCATTGAAATAAGCTTGCGTCTCCACGGAAACAGCATC | + |
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Preference number: 5 (lower is better) Translates to: TQAYVLSLCKWARQI*SPIEISLRLHGNSI Trigger: GATGCTGTTTCCGTGGAGACGCAAGCTTATTTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 90 bp | GAAATCTTCATTGACTCCGTTTCCAGAACACACACAACGGTCATATaGCACACACCATCCGGGAATGAAAGAGAGAGGCTGTTGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: EIFIDSVSRTHTTVI*HTPSGNERERLLEI Trigger: TATCTCCAACAGCCTCTCTCTTTCATTCCCGGATGGTGTGTGGCATATGACCGTTGTGTGTGTTCTGGAAACGGAGTCAATGAAGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | ACATACAATGATGAGCAGCATCACAAGGAGGAGGGCCACAGTAACTaGAGCTGTAATCTCCTTCCAATACGTTTGAGGAGATGGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: TYNDEQHHKEEGHSN*SCNLLPIRLRRWKL Trigger: GAGTTTCCATCTCCTCAAACGTATTGGAAGGAGATTACAGCTTCAGTTACTGTGGCCCTCCTCCTTGTGATGCTGCTCATCATTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | TGGAAACTCTTGAGTGAAATTGAGAGGTTTGGAGGAAATCTTCATTaGCTCCGTTTCCAGAACACACACAACGGTCATATGCCACACACC | + |
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Preference number: 5 (lower is better) Translates to: WKLLSEIERFGGNLH*LRFQNTHNGHMPHT Trigger: GGTGTGTGGCATATGACCGTTGTGTGTGTTCTGGAAACGGAGTCAATGAAGATTTCCTCCAAACCTCTCAATTTCACTCAAGAGTTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CCA 90 bp | AAATACTACCAGCTCACTCAGGCTTATGTTTTGAGCCTTTGTAAATaGGCACGGCAGATATGCAGTCCCATTGAAATAAGCTTGCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: KYYQLTQAYVLSLCK*ARQICSPIEISLRL Trigger: GAGACGCAAGCTTATTTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTGGTAGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | CTCCAGACCTTTCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTGCTTTCTCAAGTTCCTTCAGGTaGATAGTCTCTCTGTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: LQTFPGIFLKGHTVHLAFSSSFR*IVSLSA Trigger: CGCTGACAGAGAGACTATCAACCTGAAGGAACTTGA...GAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGAAAGGTCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | TTTCAATGGACTGGGCAGATCAGTCCTTCCATAAACATTTGTTGGTTGGATTCTTGGAGGAAATCTTCATaGACTCCGTTTCCAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: FQWTGQISPSINICWLDSWRKSS*TPFPEH Trigger: GTGTTCTGGAAACGGAGTCAATGAAGATTTCCTCCA...AGAATCCAACCAACAAATGTTTATGGAAGGACTGATCTGCCCAGTCCATTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | CTCCAGACCTTTCCAGGCATTTTCTTAAAAGGGCATACAGTACATCTTGCTTTCACTCTGCATTTGGTTTaGCTGAAGCAATTTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LQTFPGIFLKGHTVHLAFTLHLV*LKQFGV Trigger: AACCCCAAATTGCTTCAGCAAAACCAAATGCAGAGT...GAAAGCAAGATGTACTGTATGCCCTTTTAAGAAAATGCCTGGAAAGGTCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | CAGAATTTCCTGTTACATTCTGAGCCAGTTTTATTTCAGGTTCACTaGAGTTGGCGATCACTGACAGTTCTGTTAATGTCTGTTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: QNFLLHSEPVLFQVH*SWRSLTVLLMSVGG Trigger: TCCTCCAACAGACATTAACAGAACTGTCAGTGATCGCCAACTTCAGTGAACCTGAAATAAAACTGGCTCAGAATGTAACAGGAAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATGTACAGAACCAACTTTaGCTGGTCCTGCCAAAATAC | + |
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Preference number: 5 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYVQNQL*LVLPKY Trigger: GTATTTTGGCAGGACCAGCAAAAGTTGGTTCTGTAC...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 90 bp | TTAGTTGAATTAGTTATCAGAAAATACATCTTCTTAGGTTTCGGGTaGCCTTGCTTAGACGTGCAGGTCAAATTTATGCCAGAATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LVELVIRKYIFLGFG*PCLDVQVKFMPEFP Trigger: AGGAAATTCTGGCATAAATTTGACCTGCACGTCTAAGCAAGGTCACCCGAAACCTAAGAAGATGTATTTTCTGATAACTAATTCAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS-3UTR CAA 90 bp | AACTCTGTGCTGTTGCTGTCACCTGTATATTACTTAGGTCATTGTATTCATTATAGGAGATGGAAACTCTaGAGTGAAATTGAGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: NSVLLLSPVYYLGHCIHYRRWKL*SEIERF Trigger: AAACCTCTCAATTTCACTCAAGAGTTTCCATCTCCT...ATAATGAATACAATGACCTAAGTAATATACAGGTGACAGCAACAGCACAGAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 72 bp | ATTGACTCCGTTTCCAGAACACACACAACGGTCATATaGCACACACCATCCGGGAATGAAAGAGAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IDSVSRTHTTVI*HTPSGNERERL Trigger: CAGCCTCTCTCTTTCATTCCCGGATGGTGTGTGGCATATGACCGTTGTGTGTGTTCTGGAAACGGAGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 72 bp | ACACACAACGGTCATATGCCACACACCATCCGGGAATaGAAGAGAGAGGCTGTTGGAGATACTGAACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: THNGHMPHTIRE*KREAVGDTEQF Trigger: GAACTGTTCAGTATCTCCAACAGCCTCTCTCTTTCATTCCCGGATGGTGTGTGGCATATGACCGTTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 72 bp | GATGAGCAGCATCACAAGGAGGAGGGCCACAGTAACTaGAGCTGTAATCTCCTTCCAATACGTTTGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DEQHHKEEGHSN*SCNLLPIRLRR Trigger: TCTCCTCAAACGTATTGGAAGGAGATTACAGCTTCAGTTACTGTGGCCCTCCTCCTTGTGATGCTGCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 72 bp | CTCTGTGCCCAAATAGTGCTCGTACAGAACCAACTTTaGCTGGTCCTGCCAAAATACTACCAGCTCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: LCAQIVLVQNQL*LVLPKYYQLTQ Trigger: CTGAGTGAGCTGGTAGTATTTTGGCAGGACCAGCAAAAGTTGGTTCTGTACGAGCACTATTTGGGCACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 90 bp | TTGCTGGTCCTGCCAAAATACTACCAGCTCACTCAGGCTTATGTTTaGAGCCTTTGTAAATGGGCACGGCAGATATGCAGTCCCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLVLPKYYQLTQAYV*SLCKWARQICSPIE Trigger: TTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTGGTAGTATTTTGGCAGGACCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 72 bp | TGCCAAAATACTACCAGCTCACTCAGGCTTATGTTTTaGGCCTTTGTAAATGGGCACGGCAGATATGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CQNTTSSLRLMF*AFVNGHGRYAV Trigger: GACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTGGTAGTATTTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS GCA 72 bp | TATGTTTTGAGCCTTTGTAAATGGGCACGGCAGATATaGAGTCCCATTGAAATAAGCTTGCGTCTCCACGGA | + |
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Preference number: 6 (lower is better) Translates to: YVLSLCKWARQI*SPIEISLRLHG Trigger: TCCGTGGAGACGCAAGCTTATTTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CCA 72 bp | CAGCTCACTCAGGCTTATGTTTTGAGCCTTTGTAAATaGGCACGGCAGATATGCAGTCCCATTGAAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLTQAYVLSLCK*ARQICSPIEIS Trigger: GCTTATTTCAATGGGACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 72 bp | CTGCCAAAATACTACCAGCTCACTCAGGCTTATGTTTaGAGCCTTTGTAAATGGGCACGGCAGATATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LPKYYQLTQAYV*SLCKWARQICS Trigger: ACTGCATATCTGCCGTGCCCATTTACAAAGGCTCAAAACATAAGCCTGAGTGAGCTGGTAGTATTTTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 72 bp | TTTGCTGAAGCAATTTGGGGTTCAAGTTCCTTCAGGTaGATAGTCTCTCTGTCAGCGTTACTATCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FAEAIWGSSSFR*IVSLSALLSRS Trigger: AGAGCGGGATAGTAACGCTGACAGAGAGACTATCAACCTGAAGGAACTTGAACCCCAAATTGCTTCAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 90 bp | ATCAAGTTTCTCTGTGCCCAAATAGTGCTCGTACAGAACCAACTTTaGCTGGTCCTGCCAAAATACTACCAGCTCACTCAGGCTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: IKFLCAQIVLVQNQL*LVLPKYYQLTQAYV Trigger: AACATAAGCCTGAGTGAGCTGGTAGTATTTTGGCAGGACCAGCAAAAGTTGGTTCTGTACGAGCACTATTTGGGCACAGAGAAACTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 90 bp | GCATTTGGTTTTGCTGAAGCAATTTGGGGTTCAAGTTCCTTCAGGTaGATAGTCTCTCTGTCAGCGTTACTATCCCGCTCTAACTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: AFGFAEAIWGSSSFR*IVSLSALLSRSNLE Trigger: CTCTAAGTTAGAGCGGGATAGTAACGCTGACAGAGAGACTATCAACCTGAAGGAACTTGAACCCCAAATTGCTTCAGCAAAACCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 72 bp | CTGTTACATTCTGAGCCAGTTTTATTTCAGGTTCACTaGAGTTGGCGATCACTGACAGTTCTGTTAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLHSEPVLFQVH*SWRSLTVLLMS Trigger: AGACATTAACAGAACTGTCAGTGATCGCCAACTTCAGTGAACCTGAAATAAAACTGGCTCAGAATGTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS TCA 72 bp | TTAGTTATCAGAAAATACATCTTCTTAGGTTTCGGGTaGCCTTGCTTAGACGTGCAGGTCAAATTTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVIRKYIFLGFG*PCLDVQVKFMP Trigger: TGGCATAAATTTGACCTGCACGTCTAAGCAAGGTCACCCGAAACCTAAGAAGATGTATTTTCTGATAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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| CDS CAA 72 bp | TATCAGAAAATACATCTTCTTAGGTTTCGGGTGACCTaGCTTAGACGTGCAGGTCAAATTTATGCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: YQKIHLLRFRVT*LRRAGQIYARI Trigger: AATTCTGGCATAAATTTGACCTGCACGTCTAAGCAAGGTCACCCGAAACCTAAGAAGATGTATTTTCTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089620.11 |
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