Pregenerated sensors for CD84 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038147Ensembl transcript IDs: ENSMUST00000135386.2, ENSMUST00000136479.8, ENSMUST00000155802.9
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATGGGAGCAGGTCAGGGTTTCTCTGGGTAAAGATCTGTGGGCCTaGGAGTCAATCCTGTACATGGCCCCTAACATTACACACTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: AWEQVRVSLGKDLWA*ESILYMAPNITHWG Trigger: TCCCCAGTGTGTAATGTTAGGGGCCATGTACAGGATTGACTCTCAGGCCCACAGATCTTTACCCAGAGAAACCCTGACCTGCTCCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| 3UTR CCA 90 bp | TGGTTCCACAGATCTTCCCTTTCTACCCACCTTCTCCCCACTTGTTaGTTTATCCCAGCCCTCATCTTCAGCAGGCACTCCCTGCTAACC | + |
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Preference number: 1 (lower is better) Translates to: WFHRSSLSTHLLPTC*FIPALIFSRHSLLT Trigger: GGTTAGCAGGGAGTGCCTGCTGAAGATGAGGGCTGGGATAAACCAACAAGTGGGGAGAAGGTGGGTAGAAAGGGAAGATCTGTGGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR GCA 90 bp | AGCCCTCATCTTCAGCAGGCACTCCCTGCTAACCCAGATCATTCCTaGCCAGAAGCAGATAGGAGCCTGTATATCTTCCTGTTTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SPHLQQALPANPDHS*PEADRSLYIFLFPS Trigger: AGAAGGAAACAGGAAGATATACAGGCTCCTATCTGCTTCTGGGCAGGAATGATCTGGGTTAGCAGGGAGTGCCTGCTGAAGATGAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR GCA 90 bp | GTTAGACAGTCTCTGAGAGGCATGTCTGATTGCATAAAGGTTGAGTaGCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: VRQSLRGMSDCIKVE*PRVLSPGKTAWEQV Trigger: GACCTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCAATCAGACATGCCTCTCAGAGACTGTCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| 3UTR CCA 90 bp | TCCCCAAAACCAGTGTTCCTTGTGAACACACCACCCAAGCAGGCCTaGGAAACATGTAAGCTAACAGAAGGCTTCCTCTCCTACAAATCT | + |
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Preference number: 1 (lower is better) Translates to: SPKPVFLVNTPPKQA*ETCKLTEGFLSYKS Trigger: AGATTTGTAGGAGAGGAAGCCTTCTGTTAGCTTACATGTTTCCCAGGCCTGCTTGGGTGGTGTGTTCACAAGGAACACTGGTTTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR TCA 90 bp | TATCTAGAGAAGACCCTGTGGGTTGACCTCACTTTACTGTCTCCCTaGTTCCAAGGGGATGAAATAAACAGATCCTGGCTAAACACTCTT | + |
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Preference number: 1 (lower is better) Translates to: YLEKTLWVDLTLLSP*FQGDEINRSWLNTL Trigger: AAGAGTGTTTAGCCAGGATCTGTTTATTTCATCCCCTTGGAATCAGGGAGACAGTAAAGTGAGGTCAACCCACAGGGTCTTCTCTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR TCA 90 bp | AGACCTAAAGAGGAACCAGAGTGGATACTTAGAACTATAGATAGCTaGGTTACACCCATACACAAGTATTTACAATGGCCTAGGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RPKEEPEWILRTIDS*VTPIHKYLQWPRGK Trigger: CTTCCCCCTAGGCCATTGTAAATACTTGTGTATGGGTGTAACTCAGCTATCTATAGTTCTAAGTATCCACTCTGGTTCCTCTTTAGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR CCA 90 bp | AGGATGTTGGATATTTTGGTGGGTATAGTAATCAGGGATGACCTCTaGGGTCTCTTAGAGTTTATAGCACATTTGTCCAGACTCTATTGG | + |
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Preference number: 1 (lower is better) Translates to: RMLDILVGIVIRDDL*GLLEFIAHLSRLYW Trigger: CCAATAGAGTCTGGACAAATGTGCTATAAACTCTAAGAGACCCCAGAGGTCATCCCTGATTACTATACCCACCAAAATATCCAACATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR TCA 90 bp | TATTCAGTGACATTCAGAATAGCCTCTGGCATTACACTATCACTTTaGATAAAAGCTAGGCCACTGCCTTACACAGGAATTTACCATCAA | + |
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Preference number: 1 (lower is better) Translates to: YSVTFRIASGITLSL*IKARPLPYTGIYHQ Trigger: TTGATGGTAAATTCCTGTGTAAGGCAGTGGCCTAGCTTTTATTCAAAGTGATAGTGTAATGCCAGAGGCTATTCTGAATGTCACTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR CAA 90 bp | ATTGTGGTTCCACAGATCTTCCCTTTCTACCCACCTTCTCCCCACTaGTTGGTTTATCCCAGCCCTCATCTTCAGCAGGCACTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IVVPQIFPFYPPSPH*LVYPSPHLQQALPA Trigger: AGCAGGGAGTGCCTGCTGAAGATGAGGGCTGGGATAAACCAACAAGTGGGGAGAAGGTGGGTAGAAAGGGAAGATCTGTGGAACCACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGAAAGATCTGTGGGCCTaGGAGTCAATCCTGTACATG | + |
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Preference number: 2 (lower is better) Translates to: CIKVECPRVLSPGKTAWEKDLWA*ESILYM Trigger: CATGTACAGGATTGACTCTCAGGCCCACAGATCTTT...CTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| 3UTR CAA 90 bp | ACCTTGTTGCCCTCCCTTTTAGGGCCCCTATTGGGACTCCTATTATaGATCTCCTTCGGTCCTTGGGCATTTCAGAAATTGACCCGATTT | + |
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Preference number: 2 (lower is better) Translates to: TLLPSLLGPLLGLLL*ISFGPWAFQKLTRF Trigger: AAATCGGGTCAATTTCTGAAATGCCCAAGGACCGAAGGAGATCAATAATAGGAGTCCCAATAGGGGCCCTAAAAGGGAGGGCAACAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCAGAGGCAGACGTGGATaGTGCTTCATCACCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HSLSSAAAYCPFCTHILFRGRRG*CFITLF Trigger: GAAGAGGGTGATGAAGCAGCATCCACGTCTGCCTCT...GAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCATCCCCAGTATCTAGAGAAGACCCTGTGGGTTGACCTCACTTTACTGTCTCAGTCAATAACAGCCTaGGCAGGATGTCTCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SHPQYLEKTLWVDLTLLSQSITA*AGCLHF Trigger: AAAATGGAGACATCCTGCCCAGGCTGTTATTGACTG...AGACAGTAAAGTGAGGTCAACCCACAGGGTCTTCTCTAGATACTGGGGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR CAA 90 bp | TGGGGATGGGAGGTTGGTTTGAGAAAGGGTTTCTTTTTGTTAGTCTaGGCTGTTCTGGAACTTTCTCTGAAGACCAAGCTAGCCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: WGWEVGLRKGFFLLV*AVLELSLKTKLALN Trigger: GTTCAAGGCTAGCTTGGTCTTCAGAGAAAGTTCCAGAACAGCCAAGACTAACAAAAAGAAACCCTTTCTCAAACCAACCTCCCATCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR CAA 90 bp | CCTGTGACCTGTGAGTGCCCTGACAGTGGTGACCAGAAAGCTATGTaGAGTATACAAAAGAAGAGAAATCAGAGAGCAGCCACTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: PVTCECPDSGDQKAM*SIQKKRNQRAATYK Trigger: TTTGTAAGTGGCTGCTCTCTGATTTCTCTTCTTTTGTATACTCAACATAGCTTTCTGGTCACCACTGTCAGGGCACTCACAGGTCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTCTGTCTTTGCCTCCTGAGTGCTGGAATCAAAGGTGTGTGCCAGGATCTACAGAGGACAAATTCTaGTGCAAAACAGATTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: ILLSLPPECWNQRCVPGSTEDKF*CKTDYS Trigger: GCTGTAATCTGTTTTGCAGCAGAATTTGTCCTCTGT...AGATCCTGGCACACACCTTTGATTCCAGCACTCAGGAGGCAAAGACAGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCATCCCCAGTATCTAGAGAAGACCCTGTGGGTTGACCTCACTTTACTGTCTGAGACAAGAAAATGTTaGGATGGTGCTTCACTACTA | + |
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Preference number: 2 (lower is better) Translates to: SHPQYLEKTLWVDLTLLSETRKC*DGASLL Trigger: TAGTAGTGAAGCACCATCCCAACATTTTCTTGTCTC...AGACAGTAAAGTGAGGTCAACCCACAGGGTCTTCTCTAGATACTGGGGATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR CAA 90 bp | GTAATCAGGGATGACCTCTGGGGTCTCTTAGAGTTTATAGCACATTaGTCCAGACTCTATTGGCCTTTAGAGTCTTCACTGAGAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: VIRDDLWGLLEFIAH*SRLYWPLESSLRNQ Trigger: CTGATTTCTCAGTGAAGACTCTAAAGGCCAATAGAGTCTGGACAAATGTGCTATAAACTCTAAGAGACCCCAGAGGTCATCCCTGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCATCCCCAGTATCTAGAGAAGACCCTGTGGGTTGACCTCACTTTACTGTCTAGAAACATCTTTTATTaGGAACCTCCAGTGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: SHPQYLEKTLWVDLTLLSRNIFY*EPPVAI Trigger: TATAGCCACTGGAGGTTCTCAATAAAAGATGTTTCT...AGACAGTAAAGTGAGGTCAACCCACAGGGTCTTCTCTAGATACTGGGGATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGAAGACCCTGTGGGTTaGCCTCACTTTACTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFEDPVG*PHFTVS Trigger: GGAGACAGTAAAGTGAGGTCAACCCACAGGGTCTTC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTTGCCTATTCAGTGACATTCAGAATAGCCTCTGGCATTACACTATCACTAGAGGCATGTCTGATTaGATAAAGGTTGAGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ECCLFSDIQNSLWHYTITRGMSD*IKVECP Trigger: AGGGCACTCAACCTTTATGCAATCAGACATGCCTCT...AGTGATAGTGTAATGCCAGAGGCTATTCTGAATGTCACTGAATAGGCAACACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGACTTAGAATTCAGGGAGAGTGTTGCCTATTCAGTGACATTCAGAATAGCCATCTCCTTCGGTCCTTaGGCATTTCAGAAATTGACC | + |
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Preference number: 2 (lower is better) Translates to: MDLEFRESVAYSVTFRIAISFGP*AFQKLT Trigger: GGTCAATTTCTGAAATGCCCAAGGACCGAAGGAGAT...GGCTATTCTGAATGTCACTGAATAGGCAACACTCTCCCTGAATTCTAAGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGGGCTAACAGTTCTCTaGCCTGCAGAACTGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFGLTVL*PAELRQ Trigger: TTGTCTCAGTTCTGCAGGGCAGAGAACTGTTAGCCC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | TACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTCCTTAATTCAGGGAGAGTGTTaGCTATTCAGTGACATTCAG | + |
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Preference number: 2 (lower is better) Translates to: YKMLLSETLFLAFQVSSLIQGEC*LFSDIQ Trigger: CTGAATGTCACTGAATAGGCAACACTCTCCCTGAAT...TAAGGAGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR CCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTATGGGGATGGGAGGTTaGTTTGAGAAAGGGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVMGMGG*FEKGFL Trigger: AAGAAACCCTTTCTCAAACCAACCTCCCATCCCCAT...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTTCTGCCCTGCAGAACTaGGACAAGAAAATGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFSALQN*DKKMLG Trigger: TCCCAACATTTTCTTGTCTCAGTTCTGCAGGGCAGA...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGACTTAGAATTCAGGGAGAGTGTTGCCTATTCAGTGACATTCAGAATAGCCGGGCATTTCAGAAATTaGCCCGATTTGTTAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: MDLEFRESVAYSVTFRIAGHFRN*PDLLNL Trigger: GAGATTTAACAAATCGGGTCAATTTCTGAAATGCCC...GGCTATTCTGAATGTCACTGAATAGGCAACACTCTCCCTGAATTCTAAGTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTTCTTTGCCTCCTGAGTaGTGGAATCAAAGGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFSLPPE*WNQRCV Trigger: CACACACCTTTGATTCCAGCACTCAGGAGGCAAAGA...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTCCATTCCTAAGTAAGTaGTGGCACATTCCAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVPFLSK*WHIPRK Trigger: CTTTCTTGGAATGTGCCAGCACTTACTTAGGAATGG...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTTGCCTATTCAGTGACATTCAGAATAGCCTCTGGCATTACACTATCACTGATTGCCATAGTCTGTaGTTCCTACATGGTAACATA | + |
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Preference number: 2 (lower is better) Translates to: ECCLFSDIQNSLWHYTITDCHSL*FLHGNI Trigger: TATGTTACCATGTAGGAAGCACAGACTATGGCAATC...AGTGATAGTGTAATGCCAGAGGCTATTCTGAATGTCACTGAATAGGCAACACTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTAATCAGGAGAGACAATaGAGAAAGGCTACCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFNQERQ*RKATPE Trigger: TTCTGGGGTAGCCTTTCTTCATTGTCTCTCCTGATT...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTAAAATGTTGGGATGGTaGTTCACTACTACCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVKMLGW*FTTTLL Trigger: AAGCAAGGTAGTAGTGAAGCACCATCCCAACATTTT...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGGACGAGATGTCACCTaGACAAAACTGTTAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VKLFWLEFSALSSSIDGFGRDVT*TKLLGR Trigger: TCTACCTAACAGTTTTGTGCAGGTGACATCTCGTCC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR CCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTTTCCTAAGTAAGTGCTaGCACATTCCAAGAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVFLSKC*HIPRKF Trigger: GAACTTTCTTGGAATGTGCCAGCACTTACTTAGGAA...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR CAA 90 bp | GGACTCCTATTATTGATCTCCTTCGGTCCTTGGGCATTTCAGAAATaGACCCGATTTGTTAAATCTCAAATTGATTCATCTCTTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GLLLLISFGPWAFQK*TRFVKSQIDSSLSS Trigger: GCTTGAAAGAGATGAATCAATTTGAGATTTAACAAATCGGGTCAATTTCTGAAATGCCCAAGGACCGAAGGAGATCAATAATAGGAGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACAAATCCAAACATCATCACCTAGATTTATAATCATCCCAGTCCCAGATAACAGTTCTCTGCCCTaGAGAACTGAGACAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: QRQIQTSSPRFIIIPVPDNSSLP*RTETRK Trigger: TTTTCTTGTCTCAGTTCTGCAGGGCAGAGAACTGTT...ATCTGGGACTGGGATGATTATAAATCTAGGTGATGATGTTTGGATTTGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTAAAGAGGAACCAGAGTaGATACTTAGAACTATAGAT | + |
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Preference number: 2 (lower is better) Translates to: ECTRCFCQRHCFWPFRSAKEEPE*ILRTID Trigger: ATCTATAGTTCTAAGTATCCACTCTGGTTCCTCTTT...AGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR CCA 90 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTTTAGGAAACGATCCTTaGTTTAAAAATCTGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: ECTRCFCQRHCFWPFRSALGNDP*FKNLGM Trigger: CATTCCCAGATTTTTAAACCAAGGATCGTTTCCTAA...AGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACAAATCCAAACATCATCACCTAGATTTATAATCATCCCAGTCCCAGATGTGTGTGCCAGGATCTaGTTATTTTATCTCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: QRQIQTSSPRFIIIPVPDVCARI*LFYLFG Trigger: TCCAAAGAGATAAAATAAGCAGATCCTGGCACACAC...ATCTGGGACTGGGATGATTATAAATCTAGGTGATGATGTTTGGATTTGTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTCCTAAGTAAGTGCTGGCACATTCCAAGAAAGTTCCAATTTTCTGTTTTTGGAATCAAAGGTGTGTaGCAGGATCTGCTTATTTTA | + |
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Preference number: 2 (lower is better) Translates to: PFLSKCWHIPRKFQFSVFGIKGV*QDLLIL Trigger: TAAAATAAGCAGATCCTGGCACACACCTTTGATTCC...AAAAACAGAAAATTGGAACTTTCTTGGAATGTGCCAGCACTTACTTAGGAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGACAAATCCAAACATCATCACCTAGATTTATAATCATCCCAGTCCCAGATAAGAAAATGTTGGGATaGTGCTTCACTACTACCTTG | + |
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Preference number: 2 (lower is better) Translates to: QRQIQTSSPRFIIIPVPDKKMLG*CFTTTL Trigger: CAAGGTAGTAGTGAAGCACCATCCCAACATTTTCTT...ATCTGGGACTGGGATGATTATAAATCTAGGTGATGATGTTTGGATTTGTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR GCA 72 bp | GCTCCAGCTTCATCCCTAGCTCTGCAACAGAACACCTaGTGCAGCCTTCCTTCTAATGTCCCCACTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: APASSLALQQNT*CSLPSNVPTPA Trigger: TGCAGGAGTGGGGACATTAGAAGGAAGGCTGCAGCAGGTGTTCTGTTGCAGAGCTAGGGATGAAGCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR TCA 72 bp | TGCTACAAGAGCATGCTAGCTTCCAATGTGACAGGCTaGCCTGTGACCTGTGAGTGCCCTGACAGTGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: CYKSMLASNVTG*PVTCECPDSGD Trigger: GTCACCACTGTCAGGGCACTCACAGGTCACAGGTCAGCCTGTCACATTGGAAGCTAGCATGCTCTTGTAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| 3UTR GCA 72 bp | CCAGCTTCATCCCTAGCTCTGCAACAGAACACCTGCTaGAGCCTTCCTTCTAATGTCCCCACTCCTGCACAT | + |
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Preference number: 3 (lower is better) Translates to: PASSLALQQNTC*SLPSNVPTPAH Trigger: ATGTGCAGGAGTGGGGACATTAGAAGGAAGGCTGCAGCAGGTGTTCTGTTGCAGAGCTAGGGATGAAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR GCA 72 bp | CTTCAGCAGGCACTCCCTGCTAACCCAGATCATTCCTaGCCAGAAGCAGATAGGAGCCTGTATATCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LQQALPANPDHS*PEADRSLYIFL Trigger: CAGGAAGATATACAGGCTCCTATCTGCTTCTGGGCAGGAATGATCTGGGTTAGCAGGGAGTGCCTGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
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| 3UTR CCA 72 bp | AGATCTTCCCTTTCTACCCACCTTCTCCCCACTTGTTaGTTTATCCCAGCCCTCATCTTCAGCAGGCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSSLSTHLLPTC*FIPALIFSRHS Trigger: GGAGTGCCTGCTGAAGATGAGGGCTGGGATAAACCAACAAGTGGGGAGAAGGTGGGTAGAAAGGGAAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR CCA 72 bp | CCCCACTCCTGCACATCCCCAATCCCACATCTATTGTaGTTCCACAGATCTTCCCTTTCTACCCACCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHSCTSPIPHLL*FHRSSLSTHLL Trigger: GAGAAGGTGGGTAGAAAGGGAAGATCTGTGGAACCACAATAGATGTGGGATTGGGGATGTGCAGGAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR CCA 72 bp | CCAGTGTTCCTTGTGAACACACCACCCAAGCAGGCCTaGGAAACATGTAAGCTAACAGAAGGCTTCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVFLVNTPPKQA*ETCKLTEGFLS Trigger: GGAGAGGAAGCCTTCTGTTAGCTTACATGTTTCCCAGGCCTGCTTGGGTGGTGTGTTCACAAGGAACACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR CCA 72 bp | TCGATAACAAGCAGGTTACTGGAGAAGAGGCAGACGTaGATGCTGCTTCATCACCCTCTTCTCGGGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SITSRLLEKRQT*MLLHHPLLGER Trigger: TCTCTCCCCGAGAAGAGGGTGATGAAGCAGCATCCACGTCTGCCTCTTCTCCAGTAACCTGCTTGTTATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR TCA 72 bp | GTCTCATCCCCAGTATCTAGAGAAGACCCTGTGGGTTaGCCTCACTTTACTGTCTCCCTGATTCCAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSSPVSREDPVG*PHFTVSLIPRG Trigger: TCCCCTTGGAATCAGGGAGACAGTAAAGTGAGGTCAACCCACAGGGTCTTCTCTAGATACTGGGGATGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR GCA 72 bp | TCTCTGAGAGGCATGTCTGATTGCATAAAGGTTGAGTaGCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRGMSDCIKVE*PRVLSPGKTAW Trigger: CCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCAATCAGACATGCCTCTCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR TCA 72 bp | AAGACCCTGTGGGTTGACCTCACTTTACTGTCTCCCTaGTTCCAAGGGGATGAAATAAACAGATCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KTLWVDLTLLSP*FQGDEINRSWL Trigger: TAGCCAGGATCTGTTTATTTCATCCCCTTGGAATCAGGGAGACAGTAAAGTGAGGTCAACCCACAGGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR GCA 72 bp | GAACTCATAGAGATCCTTCTGTCTTTGCCTCCTGAGTaGTGGAATCAAAGGTGTGTGCCAGGATCTGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELIEILLSLPPE*WNQRCVPGSAY Trigger: ATAAGCAGATCCTGGCACACACCTTTGATTCCAGCACTCAGGAGGCAAAGACAGAAGGATCTCTATGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR TCA 72 bp | GTGAGTGCCCTGACAGTGGTGACCAGAAAGCTATGTTaGGTATACAAAAGAAGAGAAATCAGAGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSALTVVTRKLC*VYKRREIREQP Trigger: TGGCTGCTCTCTGATTTCTCTTCTTTTGTATACTCAACATAGCTTTCTGGTCACCACTGTCAGGGCACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTCTGTCTTTGCCTCCTGAGTGCTGGAATCAAAGGTGTGTGCCAGGATCTGCTTATTTTATCTCTTaGGAATCAGGAGAGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ILLSLPPECWNQRCVPGSAYFIS*ESGETM Trigger: CATTGTCTCTCCTGATTCCAAAGAGATAAAATAAGC...AGATCCTGGCACACACCTTTGATTCCAGCACTCAGGAGGCAAAGACAGAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTGAGATCCTTCTGTCTTaGCCTCCTGAGTGCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVEILLS*PPECWN Trigger: ATTCCAGCACTCAGGAGGCAAAGACAGAAGGATCTC...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR GCA 72 bp | TGTCTTTGCCTCCTGAGTGCTGGAATCAAAGGTGTGTaGCAGGATCTGCTTATTTTATCTCTTTGGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLCLLSAGIKGV*QDLLILSLWNQ Trigger: CTGATTCCAAAGAGATAAAATAAGCAGATCCTGGCACACACCTTTGATTCCAGCACTCAGGAGGCAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR TCA 72 bp | CTGCTTATTTTATCTCTTTGGAATCAGGAGAGACAATaGAGAAAGGCTACCCCAGAAGGTCTGTATAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: LLILSLWNQERQ*RKATPEGLYKT Trigger: CGTCTTATACAGACCTTCTGGGGTAGCCTTTCTTCATTGTCTCTCCTGATTCCAAAGAGATAAAATAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTAGAAAGGGTTTCTTTTaGTTAGTCTTGGCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVRKGFF*LVLAVL Trigger: CAGAACAGCCAAGACTAACAAAAAGAAACCCTTTCT...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACAAATCCAAACATCATCACCTAGATTTATAATCATCCCAGTCCCAGATGGATGGGAGGTTGGTTaGAGAAAGGGTTTCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QRQIQTSSPRFIIIPVPDGWEVG*RKGFFL Trigger: CAAAAAGAAACCCTTTCTCAAACCAACCTCCCATCC...ATCTGGGACTGGGATGATTATAAATCTAGGTGATGATGTTTGGATTTGTCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCATGAGGCAAAAAGACTGGTACAGAGAATGTACAAGATGCTTTTGTCAGAGTGCATACTGCCCATTTaGTACTCATATTCTATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: THEAKRLVQRMYKMLLSECILPI*YSYSIP Trigger: GGGAATAGAATATGAGTACAAAATGGGCAGTATGCA...CTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTTTTGCCTCATGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTTCTACTGTTATGTTTTaGTTAGAGACCTGCTTACGT | + |
|
Preference number: 3 (lower is better) Translates to: ECTRCFCQRHCFWPFRSASTVMF*LETCLR Trigger: ACGTAAGCAGGTCTCTAACAAAAACATAACAGTAGA...AGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR TCA 72 bp | GATGTTGGATATTTTGGTGGGTATAGTAATCAGGGATaGCCTCTGGGGTCTCTTAGAGTTTATAGCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: DVGYFGGYSNQG*PLGSLRVYSTF Trigger: AAATGTGCTATAAACTCTAAGAGACCCCAGAGGTCATCCCTGATTACTATACCCACCAAAATATCCAACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR TCA 72 bp | GAGGAACCAGAGTGGATACTTAGAACTATAGATAGCTaGGTTACACCCATACACAAGTATTTACAATGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EEPEWILRTIDS*VTPIHKYLQWP Trigger: AGGCCATTGTAAATACTTGTGTATGGGTGTAACTCAGCTATCTATAGTTCTAAGTATCCACTCTGGTTCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR TCA 72 bp | ACATTCAGAATAGCCTCTGGCATTACACTATCACTTTaGATAAAAGCTAGGCCACTGCCTTACACAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: TFRIASGITLSL*IKARPLPYTGI Trigger: AATTCCTGTGTAAGGCAGTGGCCTAGCTTTTATTCAAAGTGATAGTGTAATGCCAGAGGCTATTCTGAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR TCA 72 bp | ACGATCCTTGGTTTAAAAATCTGGGAATGCAAACTTTaGAAAGGTATCTACCACAGCCTTAGTTCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TILGLKIWECKL*KGIYHSLSSAA Trigger: AGCTGCTGAACTAAGGCTGTGGTAGATACCTTTTCAAAGTTTGCATTCCCAGATTTTTAAACCAAGGATCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR CCA 72 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTaGCCTTTCAGGTCAGCTCCTTATAGCTATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ECTRCFCQRHCF*PFRSAPYSYES Trigger: ACTTTCATAGCTATAAGGAGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTTTTCTGTTTTTGACCTaGAACACTGTTCTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVFLFLT*NTVLHF Trigger: GAAATGCAGAACAGTGTTCAAGGTCAAAAACAGAAA...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGCATTTATATACTACTaGGCCTTTTCCCCTTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VKLFWLEFSALSSSIDGFAFIYY*AFSPCS Trigger: GCTACAAGGGGAAAAGGCCAAGTAGTATATAAATGC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR GCA 72 bp | TCATGCCACAAATCATTTATAGATTGCCATAGTCTGTaGTTCCTACATGGTAACATACATTCTCGCCACATT | + |
|
Preference number: 3 (lower is better) Translates to: SCHKSFIDCHSL*FLHGNIHSRHI Trigger: AATGTGGCGAGAATGTATGTTACCATGTAGGAAGCACAGACTATGGCAATCTATAAATGATTTGTGGCATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR GCA 72 bp | TCTAGGACAGATAAAAAGGATCCACTTATTGGCACTTaGCATGATCCTGTTCAGATACTTAATATGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SRTDKKDPLIGT*HDPVQILNMGK Trigger: TTTCCCCATATTAAGTATCTGAACAGGATCATGGCAAGTGCCAATAAGTGGATCCTTTTTATCTGTCCTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR GCA 72 bp | TACTGTTATGTTTTTGTTAGAGACCTGCTTACGTTTTaGTGCCTATTAGAGTTAGGAAACGATCCTTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: YCYVFVRDLLTF*CLLELGNDPWF Trigger: AAACCAAGGATCGTTTCCTAACTCTAATAGGCAGCAAAACGTAAGCAGGTCTCTAACAAAAACATAACAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCCTAAGTAAGTGCTGGCACATTCCAAGAAAGTTCCAATTTTCTGTTTTTTTCTTTTTGTTAGTCTaGGCTGTTCTGGAACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PFLSKCWHIPRKFQFSVFFFLLV*AVLELS Trigger: AGAAAGTTCCAGAACAGCCAAGACTAACAAAAAGAA...AAAAACAGAAAATTGGAACTTTCTTGGAATGTGCCAGCACTTACTTAGGAATGG 37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTTCCAATTTTCTGTTTTaGACCTTGAACACTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VKLFWLEFSALSSSIDGFSNFLF*TLNTVL Trigger: CAGAACAGTGTTCAAGGTCAAAAACAGAAAATTGGA...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR CCA 72 bp | TTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATaGATTTGTAGACAGATATTGTTTAAATTTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVGIFRPVIFYR*ICRQILFKFGF Trigger: AAAGCCAAATTTAAACAATATCTGTCTACAAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR CCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAACCTGGCAACACAGCATaGCGAGGATGGAAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQPGNTA*RGWKLG Trigger: TCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGG...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGGCGAGGATGGAAGCTTaGAGTGTCTGTACATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKVECPRVLSPGKTAWEQARMEA*SVCTWL Trigger: CAGCCATGTACAGACACTCCAAGCTTCCATCCTCGC...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAGCGAGGATGGAAGCTTaGAGTGTCTGTACATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQARMEA*SVCTWL Trigger: CAGCCATGTACAGACACTCCAAGCTTCCATCCTCGC...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAGTGTCTGTACATGGCTaGTGGACAGTGACAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQVSVHG*WTVTES Trigger: TGACTCTGTCACTGTCCAGCAGCCATGTACAGACAC...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCACACGGCCAATCCTCCTaGCAACACAGCATGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSHGQSS*QHSMAR Trigger: CCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTG...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | TGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGTCTGTACATGGCTGCTaGACAGTGACAGAGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CIKVECPRVLSPGKTAWESVHGC*TVTESE Trigger: TTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGA...CTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | CCTCTACCCACGGAGCTTGCTTCATTCCTAAATCCCTaGGCTGGCCCAGGTTATATCCAAAAGACTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTELASFLNP*AGPGYIQKTET Trigger: GGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGGTAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGACTGAAACCGTTGATTCAATCCTCATAGATGACTTGTCCTTGTGTCCTCACGGCCAATCCTCCTaGCAACACAGCATGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKTETVDSILIDDLSLCPHGQSS*QHSMAR Trigger: CCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTG...AGGACACAAGGACAAGTCATCTATGAGGATTGAATCAACGGTTTCAGTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | CCCTCCCTTTTAGGGCCCCTATTGGGACTCCTATTATaGATCTCCTTCGGTCCTTGGGCATTTCAGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLGPLLGLLL*ISFGPWAFQKL Trigger: CAATTTCTGAAATGCCCAAGGACCGAAGGAGATCAATAATAGGAGTCCCAATAGGGGCCCTAAAAGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAAGCAACAGATGATTaGGAAGTCCAGGCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQKATDD*EVQAML Trigger: CAACATTGCCTGGACTTCTCAATCATCTGTTGCTTT...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGGGTAGTAGATCTTGGTaGTGGTTTCCTCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKVECPRVLSPGKTAWEQGSRSW*WFPHSL Trigger: AAGAGAATGAGGAAACCATCACCAAGATCTACTACC...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATCCTCAACAGCATGGCGAGGATaGAAGCTTGGAGTGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWLAQVISKRLKPLIQSSTAWRG*KLGVSV Trigger: TACAGACACTCCAAGCTTCCATCCTCGCCATGCTGT...TGAGGATTGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAACCTCATTCTCTTCATTaGTGTCTGCTTTGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQPHSLH*CLLCKF Trigger: GAACTTACAAAGCAGACATCAATGAAGAGAATGAGG...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAACAGAGCATGTCAGTGTaGTATTACAGGTATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTELASFLNPLAGPGYIQQSMSV*YYRYCS Trigger: TGAACAATACCTGTAATATCACACTGACATGCTCTG...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCACATTACCACCGGGTCTaGATCTTTTCCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSHYHRV*IFSCCF Trigger: GAAGCAGCAGGAAAAGATGCAGACCCGGTGGTAATG...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGTTTCATCATAGATTCTaGACTCTGTGGGTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKVECPRVLSPGKTAWEQFHHRF*TLWVEH Trigger: ATGCTCAACCCACAGAGTCCAGAATCTATGATGAAA...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | GCGCATTTGTTTCAGTTCATTACCATCGGCTGGACATaGTCGATAACAAGCAGGTTACTGGAGAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHLFQFITIGWT*SITSRLLEKRQ Trigger: CTGCCTCTTCTCCAGTAACCTGCTTGTTATCGACAATGTCCAGCCGATGGTAATGAACTGAAACAAATGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | TGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGTATAAAAGCAACAGATaGTTGAGAAGTCCAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CIKVECPRVLSPGKTAWEYKSNR*LRSPGN Trigger: ATTGCCTGGACTTCTCAATCATCTGTTGCTTTTATA...CTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGATATACTGTTTTCTTTaGGACATCATCTGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKVECPRVLSPGKTAWEQIYCFL*DIICFQ Trigger: CTGGAAGCAGATGATGTCTCAAAGAAAACAGTATAT...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATGTCTGCATCTTTTCCTaGTGCTTCAGACCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNPLAGPGYIQKTETVDVCIFS*CFRPGL Trigger: CAAACCTGGTCTGAAGCAGCAGGAAAAGATGCAGAC...ATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCGTGTCTGTACATGGCTaGTGGACAGTGACAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSAAAYCPFCTHILFVSVHG*WTVTES Trigger: TGACTCTGTCACTGTCCAGCAGCCATGTACAGACAC...GAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGTACAGAGAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTGGCAACACAGCATaGCGAGGATGGAAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDWYRECTRCFCQRHCFWPGNTA*RGWKLG Trigger: TCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGG...CCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | ACTAAACAGTCATCCCAGGCTAGACACATCGTAAAATaGGAACTTGAAGCCGTTGCCCGTGAGAGTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQSSQARHIVK*ELEAVARESCK Trigger: CTTACAACTCTCACGGGCAACGGCTTCAAGTTCCAATTTTACGATGTGTCTAGCCTGGGATGACTGTTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | TGTGAGTGCCCTGACAGTGGTGACCAGAAAGCTATGTaGAGTATACAAAAGAAGAGAAATCAGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CECPDSGDQKAM*SIQKKRNQRAA Trigger: GGCTGCTCTCTGATTTCTCTTCTTTTGTATACTCAACATAGCTTTCTGGTCACCACTGTCAGGGCACTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGTTGCCTATTCAGTGACATTCAGAATAGCCTCTGGCATTACACTATCACTGGGGAGTGGACGATTTaGAGGACATTGCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECCLFSDIQNSLWHYTITGEWTI*RTLLFS Trigger: AGAGAAAAGCAATGTCCTTCAAATCGTCCACTCCCC...AGTGATAGTGTAATGCCAGAGGCTATTCTGAATGTCACTGAATAGGCAACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCACTGGACTCTGTGGGTTaGGCATTTCTTGAAACTACA | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSLDSVG*AFLETT Trigger: TGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAG...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAAAAGACTGGTACAGAGAATGTACAAGATGCTTTTGTCAGAGACACTGGTCTGCATCTTTTCCTaGTGCTTCAGACCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAKRLVQRMYKMLLSETLVCIFS*CFRPGL Trigger: CAAACCTGGTCTGAAGCAGCAGGAAAAGATGCAGAC...CAGTGTCTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTTTTGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | TGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGACTCTGTGTAATTTTTaGTGTTTTAAGTCGACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CIKVECPRVLSPGKTAWETLCNF*CFKSTV Trigger: TACCGTCGACTTAAAACACCAAAAATTACACAGAGT...CTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGACTCTGTGTAATTTTTaGTGTTTTAAGTCGACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IKVECPRVLSPGKTAWEQTLCNF*CFKSTV Trigger: TACCGTCGACTTAAAACACCAAAAATTACACAGAGT...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGACTGAAACCGTTGATTCAATCCTCATAGATGACTTGTCCTTGTGTCCTTGGAGTGTCTGTACATaGCTGCTGGACAGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKTETVDSILIDDLSLCPWSVCT*LLDSDR Trigger: TCTGTCACTGTCCAGCAGCCATGTACAGACACTCCA...AGGACACAAGGACAAGTCATCTATGAGGATTGAATCAACGGTTTCAGTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | GATGACCTCTGGGGTCTCTTAGAGTTTATAGCACATTaGTCCAGACTCTATTGGCCTTTAGAGTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DDLWGLLEFIAH*SRLYWPLESSL Trigger: CAGTGAAGACTCTAAAGGCCAATAGAGTCTGGACAAATGTGCTATAAACTCTAAGAGACCCCAGAGGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAGACTGAAACCGTTGATTCAATCCTCATAGATGACTTGTCCTTGTGTCCTGGGGAGTGGACGATTTaGAGGACATTGCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKTETVDSILIDDLSLCPGEWTI*RTLLFS Trigger: AGAGAAAAGCAATGTCCTTCAAATCGTCCACTCCCC...AGGACACAAGGACAAGTCATCTATGAGGATTGAATCAACGGTTTCAGTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATCCTCAGGGTTGAGCATTTCTTaGAACTACAGCATATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLAQVISKRLKPLIQSSGLSIS*NYSIYC Trigger: ACAGTATATGCTGTAGTTTCAAGAAATGCTCAACCC...TGAGGATTGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CACAGCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCCTGGACTCTGTGGGTTaGGCATTTCTTGAAACTACA | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSAAAYCPFCTHILFLDSVG*AFLETT Trigger: TGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAG...GAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATCCTCACTCTTCATTGATGTCTaGTTTGTAAGTTCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PWLAQVISKRLKPLIQSSLFIDV*FVSSCI Trigger: GATGCAGGAACTTACAAAGCAGACATCAATGAAGAG...TGAGGATTGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATCGATTTGAAGGACATTaGTTTTCTCTCCAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNPLAGPGYIQKTETVDRFEGH*FSLQRD Trigger: GTCCCTTTGGAGAGAAAAGCAATGTCCTTCAAATCG...ATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCACGATTTGAAGGACATTaGTTTTCTCTCCAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSRFEGH*FSLQRD Trigger: GTCCCTTTGGAGAGAAAAGCAATGTCCTTCAAATCG...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | ACTCATGAGGCAAAAAGACTGGTACAGAGAATGTACAAGATGCTTTTGTCAGAGTCTGTACATGGCTGCTaGACAGTGACAGAGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: THEAKRLVQRMYKMLLSESVHGC*TVTESE Trigger: TTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGA...CTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTTTTGCCTCATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATCCTCAAGATTCTGGACTCTGTaGGTTGAGCATTTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PWLAQVISKRLKPLIQSSRFWTL*VEHFLK Trigger: TTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCT...TGAGGATTGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | GCAAAAAGACTGGTACAGAGAATGTACAAGATGCTTTaGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKRLVQRMYKML*SETLFLAFQVS Trigger: GCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATCCTCAACCAGGTCATACTTCTaGTCTATGATTTCTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLAQVISKRLKPLIQSSTRSYF*SMISIR Trigger: ACGAATAGAAATCATAGATCAGAAGTATGACCTGGT...TGAGGATTGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCCCGACCTCATTCTCTTCATTaGTGTCTGCTTTGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALVQQLHTAHFVLIFYSRPHSLH*CLLCKF Trigger: GAACTTACAAAGCAGACATCAATGAAGAGAATGAGG...TCGGGAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTGGTAGTAGATCTTGGTaGTGGTTTCCTCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECTRCFCQRHCFWPFRSAGSRSW*WFPHSL Trigger: AAGAGAATGAGGAAACCATCACCAAGATCTACTACC...AGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATCAGAGCATGTCAGTGTaGTATTACAGGTATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNPLAGPGYIQKTETVDQSMSV*YYRYCS Trigger: TGAACAATACCTGTAATATCACACTGACATGCTCTG...ATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAGGGTTGAGCATTTCTTaGAACTACAGCATATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSGLSIS*NYSIYC Trigger: ACAGTATATGCTGTAGTTTCAAGAAATGCTCAACCC...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTCATTACCACCGGGTCTaGATCTTTTCCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLFWLEFSALSSSIDGFHYHRV*IFSCCF Trigger: GAAGCAGCAGGAAAAGATGCAGACCCGGTGGTAATG...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAAGATTCTGGACTCTGTaGGTTGAGCATTTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSRFWTL*VEHFLK Trigger: TTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCT...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTTTCATCATAGATTCTaGACTCTGTGGGTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLNPLAGPGYIQKTETVDFHHRF*TLWVEH Trigger: ATGCTCAACCCACAGAGTCCAGAATCTATGATGAAA...ATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| 3UTR CAA 72 bp | GAGGTTGGTTTGAGAAAGGGTTTCTTTTTGTTAGTCTaGGCTGTTCTGGAACTTTCTCTGAAGACCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EVGLRKGFFLLV*AVLELSLKTKL Trigger: TAGCTTGGTCTTCAGAGAAAGTTCCAGAACAGCCAAGACTAACAAAAAGAAACCCTTTCTCAAACCAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCAATATACTGTTTTCTTTaGGACATCATCTTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNPLAGPGYIQKTETVDSIYCFL*DIIFQD Trigger: GTCCTGGAAGATGATGTCTCAAAGAAAACAGTATAT...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136479.8 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGTCTGCATCTTTTCCTaGTGCTTCAGACCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKLFWLEFSALSSSIDGFVCIFS*CFRPGL Trigger: CAAACCTGGTCTGAAGCAGCAGGAAAAGATGCAGAC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR GCA 90 bp | GAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGCCTTTCAGGTCAGCTCTCTTCATTGATGTCTaGTTTGTAAGTTCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ECTRCFCQRHCFWPFRSALFIDV*FVSSCI Trigger: GATGCAGGAACTTACAAAGCAGACATCAATGAAGAG...AGCTGACCTGAAAGGCCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | AAAGACTGGTACAGAGAATGTACAAGATGCTTTTGTCAGAGACACTGTTTTTGGAAAGCAACAGATGATTaGGAAGTCCAGGCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDWYRECTRCFCQRHCFWKATDD*EVQAML Trigger: CAACATTGCCTGGACTTCTCAATCATCTGTTGCTTT...CCAAAAACAGTGTCTCTGACAAAAGCATCTTGTACATTCTCTGTACCAGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | ATGGACTTAGAATTCAGGGAGAGTGTTGCCTATTCAGTGACATTCAGAATAGCCACCAGGTCATACTTCTaGTCTATGATTTCTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MDLEFRESVAYSVTFRIATRSYF*SMISIR Trigger: ACGAATAGAAATCATAGATCAGAAGTATGACCTGGT...GGCTATTCTGAATGTCACTGAATAGGCAACACTCTCCCTGAATTCTAAGTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
||
| CDS-3UTR TCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTCCTCATTCTCTTCATTaGTGTCTGCTTTGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVPHSLH*CLLCKF Trigger: GAACTTACAAAGCAGACATCAATGAAGAGAATGAGG...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCCTAAGTAAGTGCTGGCACATTCCAAGAAAGTTCCAATTTTCTGTTTTTAAAGCAACAGATGATTaGGAAGTCCAGGCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFLSKCWHIPRKFQFSVFKATDD*EVQAML Trigger: CAACATTGCCTGGACTTCTCAATCATCTGTTGCTTT...AAAAACAGAAAATTGGAACTTTCTTGGAATGTGCCAGCACTTACTTAGGAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | AAATCTCATTTCATTTTCTCAGCAGGGACGAGATGTCACCTGCACAAAACTGTTACCAGGTCATACTTCTaGTCTATGATTTCTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHFIFSAGTRCHLHKTVTRSYF*SMISIR Trigger: ACGAATAGAAATCATAGATCAGAAGTATGACCTGGT...AACAGTTTTGTGCAGGTGACATCTCGTCCCTGCTGAGAAAATGAAATGAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTGGTAGTAGATCTTGGTaGTGGTTTCCTCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLFWLEFSALSSSIDGFGSRSW*WFPHSL Trigger: AAGAGAATGAGGAAACCATCACCAAGATCTACTACC...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| 3UTR CAA 72 bp | GACAAGAAAATGTTGGGATGGTGCTTCACTACTACCTaGCTTATGATGTCCGGTGCTATATATGTGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DKKMLGWCFTTT*LMMSGAIYVIN Trigger: ATTAATCACATATATAGCACCGGACATCATAAGCAAGGTAGTAGTGAAGCACCATCCCAACATTTTCTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTTTTGGTTGGAATTTTCCGCCCTGTCATCTTCTATAGATGGATTTCTCTTCATTGATGTCTaGTTTGTAAGTTCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VKLFWLEFSALSSSIDGFLFIDV*FVSSCI Trigger: GATGCAGGAACTTACAAAGCAGACATCAATGAAGAG...AAATCCATCTATAGAAGATGACAGGGCGGAAAATTCCAACCAAAAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAATCCAAACATCATCACCTAGATTTATAATCATCCCAGTCCCAGATTATAAAAGCAACAGATaGTTGAGAAGTCCAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRQIQTSSPRFIIIPVPDYKSNR*LRSPGN Trigger: ATTGCCTGGACTTCTCAATCATCTGTTGCTTTTATA...ATCTGGGACTGGGATGATTATAAATCTAGGTGATGATGTTTGGATTTGTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135386.2 |
||
| CDS CCA 90 bp | AGAAAGAGCACGGCCAATCCTCCTGGCAACACAGCATGGCGAGGATaGAAGCTTGGAGTGTCTGTACATGGCTGCTGGACAGTGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKSTANPPGNTAWRG*KLGVSVHGCWTVTE Trigger: CTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTGCTCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
||
| CDS GCA 90 bp | AACACAGCATGGCGAGGATGGAAGCTTGGAGTGTCTGTACATGGCTaGTGGACAGTGACAGAGTCAGAACTGTTGCTGACAGGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTAWRGWKLGVSVHG*WTVTESELLLTGFW Trigger: CCAGAACCCTGTCAGCAACAGTTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | TGGCAACACAGCATGGCGAGGATGGAAGCTTGGAGTGTCTGTACATaGCTGCTGGACAGTGACAGAGTCAGAACTGTTGCTGACAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: WQHSMARMEAWSVCT*LLDSDRVRTVADRV Trigger: AACCCTGTCAGCAACAGTTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | AGAATAAGCAGAAAGAGCACGGCCAATCCTCCTGGCAACACAGCATaGCGAGGATGGAAGCTTGGAGTGTCTGTACATGGCTGCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: RISRKSTANPPGNTA*RGWKLGVSVHGCWT Trigger: TGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTGCTCTTTCTGCTTATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGGGCGAGGATGGAAGCTaGGAGTGTCTGTACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: IKVECPRVLSPGKTAWEQGEDGS*ECLYMA Trigger: AGCCATGTACAGACACTCCAAGCTTCCATCCTCGCC...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAATGTGTAGGTCAGTTTTaGGTCCATGGGGGAGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PTELASFLNPLAGPGYIQCVGQF*VHGGVD Trigger: GTCCACTCCCCCATGGACCAAAAACTGACCTACACA...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | CAACATCGGAATGAGAATAAGCAGAAAGAGCACGGCCAATCCTCCTaGCAACACAGCATGGCGAGGATGGAAGCTTGGAGTGTCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: QHRNENKQKEHGQSS*QHSMARMEAWSVCT Trigger: TGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTGCTCTTTCTGCTTATTCTCATTCCGATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | TGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGGGGGGAGTGGACGATTaGAAGGACATTGCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CIKVECPRVLSPGKTAWEGGVDD*KDIAFL Trigger: GAGAAAAGCAATGTCCTTCAAATCGTCCACTCCCCC...CTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTATGCA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | GCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCCCGAGGCGAGGATGGAAGCTaGGAGTGTCTGTACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: ALVQQLHTAHFVLIFYSRGEDGS*ECLYMA Trigger: AGCCATGTACAGACACTCCAAGCTTCCATCCTCGCC...TCGGGAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | GCCTTAGTTCAGCAGCTGCATACTGCCCATTTTGTACTCATATTCTATTCCCGATGTGTAGGTCAGTTTTaGGTCCATGGGGGAGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: ALVQQLHTAHFVLIFYSRCVGQF*VHGGVD Trigger: GTCCACTCCCCCATGGACCAAAAACTGACCTACACA...TCGGGAATAGAATATGAGTACAAAATGGGCAGTATGCAGCTGCTGAACTAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | CCCACGGAGCTTGCTTCATTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAACTTCTGTCCTTCATGTaGGTTTCCTTCATCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PTELASFLNPLAGPGYIQLLSFM*VSFIFS Trigger: TGAGAAGATGAAGGAAACCAACATGAAGGACAGAAG...TTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAATGAAGCAAGCTCCGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGTGGGTTGAGCATTTCTaGAAACTACAGCATATACTG | + |
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Preference number: 5 (lower is better) Translates to: IKVECPRVLSPGKTAWEQWVEHF*KLQHIL Trigger: CAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCA...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | AGGAATAAATGGTGGTCACCGGATCTTTCTTACAGGACAGCATCTTaGACTGAGGGATTTCATCATAGATTCTGGACTCTGTGGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RNKWWSPDLSYRTAS*TEGFHHRFWTLWVE Trigger: CTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCAAGATGCTGTCCTGTAAGAAAGATCCGGTGACCACCATTTATTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | TGTTGGTTTCCTTCATCTTCTCAGAAAGCTGCACTGAGGAATAAATaGTGGTCACCGGATCTTTCTTACAGGACAGCATCTTGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: CWFPSSSQKAALRNK*WSPDLSYRTASWTE Trigger: CTCAGTCCAAGATGCTGTCCTGTAAGAAAGATCCGGTGACCACCATTTATTCCTCAGTGCAGCTTTCTGAGAAGATGAAGGAAACCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACAGCATGGGAGCAGCATATACTGTTTTCTTaGAGACATCATCTTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: IKVECPRVLSPGKTAWEQHILFS*RHHLPG Trigger: TCCTGGAAGATGATGTCTCAAAGAAAACAGTATATG...CTGCTCCCATGCTGTTTTTCCTGGGGAAAGGACCCTAGGGCACTCAACCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136479.8 |
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| CDS-3UTR CAA 90 bp | CTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATTCACTTCTGTCCTTCATGTaGGTTTCCTTCATCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LNPLAGPGYIQKTETVDSLLSFM*VSFIFS Trigger: TGAGAAGATGAAGGAAACCAACATGAAGGACAGAAG...TGAATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS GCA 90 bp | GTAGTAGATCTTGGTGATGGTTTCCTCATTCTCTTCATTGATGTCTaGTTTGTAAGTTCCTGCATCTTCCATCCTCAGGTCTCTAATGAC | + |
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Preference number: 5 (lower is better) Translates to: VVDLGDGFLILFIDV*FVSSCIFHPQVSND Trigger: GTCATTAGAGACCTGAGGATGGAAGATGCAGGAACTTACAAAGCAGACATCAATGAAGAGAATGAGGAAACCATCACCAAGATCTACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135386.2 ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 90 bp | TCTTACAGGACAGCATCTTGGACTGAGGGATTTCATCATAGATTCTaGACTCTGTGGGTTGAGCATTTCTTGAAACTACAGCATATACTG | + |
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Preference number: 5 (lower is better) Translates to: SYRTASWTEGFHHRF*TLWVEHFLKLQHIL Trigger: CAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCAAGATGCTGTCCTGTAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | TTCCTAAATCCCTTGGCTGGCCCAGGTTATATCCAAAAGACTGAAACCGTTGATCATATACTGTTTTCTTaGAGACATCATCTGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: FLNPLAGPGYIQKTETVDHILFS*RHHLLP Trigger: TGGAAGCAGATGATGTCTCAAAGAAAACAGTATATG...ATCAACGGTTTCAGTCTTTTGGATATAACCTGGGCCAGCCAAGGGATTTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| CDS CCA 90 bp | ACAGCATCTTGGACTGAGGGATTTCATCATAGATTCTGGACTCTGTaGGTTGAGCATTTCTTGAAACTACAGCATATACTGTTTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TASWTEGFHHRFWTL*VEHFLKLQHILFSL Trigger: CAAAGAAAACAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCAAGATGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS-3UTR CAA 90 bp | CAAAAGACTGAAACCGTTGATTCAATCCTCATAGATGACTTGTCCTTGTGTCCTTGGGTTGAGCATTTCTaGAAACTACAGCATATACTG | + |
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Preference number: 5 (lower is better) Translates to: QKTETVDSILIDDLSLCPWVEHF*KLQHIL Trigger: CAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCA...AGGACACAAGGACAAGTCATCTATGAGGATTGAATCAACGGTTTCAGTCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS TCA 90 bp | TTCCACAGAGCATGTCAGTGTGATATTACAGGTATTGTTCAAAGATaGTATCAAACTCTGTGTAATTTTTGGTGTTTTAAGTCGACGGTA | + |
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Preference number: 5 (lower is better) Translates to: FHRACQCDITGIVQR*YQTLCNFWCFKSTV Trigger: TACCGTCGACTTAAAACACCAAAAATTACACAGAGTTTGATATCATCTTTGAACAATACCTGTAATATCACACTGACATGCTCTGTGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | ACGGCCAATCCTCCTGGCAACACAGCATGGCGAGGATaGAAGCTTGGAGTGTCTGTACATGGCTGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: TANPPGNTAWRG*KLGVSVHGCWT Trigger: TGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | AGAAAGAGCACGGCCAATCCTCCTGGCAACACAGCATaGCGAGGATGGAAGCTTGGAGTGTCTGTACATGGC | + |
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Preference number: 6 (lower is better) Translates to: RKSTANPPGNTA*RGWKLGVSVHG Trigger: GCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTGCTCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | CGAGGATGGAAGCTTGGAGTGTCTGTACATGGCTGCTaGACAGTGACAGAGTCAGAACTGTTGCTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: RGWKLGVSVHGC*TVTESELLLTG Trigger: CCCTGTCAGCAACAGTTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS GCA 72 bp | TGGCGAGGATGGAAGCTTGGAGTGTCTGTACATGGCTaGTGGACAGTGACAGAGTCAGAACTGTTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: WRGWKLGVSVHG*WTVTESELLLT Trigger: TGTCAGCAACAGTTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | AGCATGGCGAGGATGGAAGCTTGGAGTGTCTGTACATaGCTGCTGGACAGTGACAGAGTCAGAACTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SMARMEAWSVCT*LLDSDRVRTVA Trigger: AGCAACAGTTCTGACTCTGTCACTGTCCAGCAGCCATGTACAGACACTCCAAGCTTCCATCCTCGCCATGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | AATGAGAATAAGCAGAAAGAGCACGGCCAATCCTCCTaGCAACACAGCATGGCGAGGATGGAAGCTTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NENKQKEHGQSS*QHSMARMEAWS Trigger: ACTCCAAGCTTCCATCCTCGCCATGCTGTGTTGCCAGGAGGATTGGCCGTGCTCTTTCTGCTTATTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | TGGTGGTCACCGGATCTTTCTTACAGGACAGCATCTTaGACTGAGGGATTTCATCATAGATTCTGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: WWSPDLSYRTAS*TEGFHHRFWTL Trigger: CAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCAAGATGCTGTCCTGTAAGAAAGATCCGGTGACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | TCATCTTCTCAGAAAGCTGCACTGAGGAATAAATGGTaGTCACCGGATCTTTCTTACAGGACAGCATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSQKAALRNKW*SPDLSYRTASW Trigger: CCAAGATGCTGTCCTGTAAGAAAGATCCGGTGACCACCATTTATTCCTCAGTGCAGCTTTCTGAGAAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | CCTTCATCTTCTCAGAAAGCTGCACTGAGGAATAAATaGTGGTCACCGGATCTTTCTTACAGGACAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PSSSQKAALRNK*WSPDLSYRTAS Trigger: AGATGCTGTCCTGTAAGAAAGATCCGGTGACCACCATTTATTCCTCAGTGCAGCTTTCTGAGAAGATGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CAA 72 bp | TTACCCAAAGCCTTAGGCAGACTTCTGTCCTTCATGTaGGTTTCCTTCATCTTCTCAGAAAGCTGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LPKALGRLLSFM*VSFIFSESCTE Trigger: CTCAGTGCAGCTTTCTGAGAAGATGAAGGAAACCAACATGAAGGACAGAAGTCTGCCTAAGGCTTTGGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | ACAGCATCTTGGACTGAGGGATTTCATCATAGATTCTaGACTCTGTGGGTTGAGCATTTCTTGAAACTACAG | + |
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Preference number: 6 (lower is better) Translates to: TASWTEGFHHRF*TLWVEHFLKLQ Trigger: CTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCAAGATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CCA 72 bp | TGGACTGAGGGATTTCATCATAGATTCTGGACTCTGTaGGTTGAGCATTTCTTGAAACTACAGCATATACTG | + |
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Preference number: 6 (lower is better) Translates to: WTEGFHHRFWTL*VEHFLKLQHIL Trigger: CAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTCAGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136479.8 ENSMUST00000155802.9 |
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| CDS CAA 72 bp | GAGCATTTCTTGAAACTACAGCATATACTGTTTTCTTaGAGACATCATCTGCTTCCAGGACAATCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EHFLKLQHILFS*RHHLLPGQSCL Trigger: GAGACAGGATTGTCCTGGAAGCAGATGATGTCTCAAAGAAAACAGTATATGCTGTAGTTTCAAGAAATGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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| CDS CAA 90 bp | GAGGGATTTCATCATAGATTCTGGACTCTGTGGGTTGAGCATTTCTaGAAACTACAGCATATACTGTTTTCTTTGAGACATCATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EGFHHRFWTLWVEHF*KLQHILFSLRHHLP Trigger: TGGAAGATGATGTCTCAAAGAAAACAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136479.8 |
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| CDS CAA 90 bp | GAGGGATTTCATCATAGATTCTGGACTCTGTGGGTTGAGCATTTCTaGAAACTACAGCATATACTGTTTTCTTTGAGACATCATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: EGFHHRFWTLWVEHF*KLQHILFSLRHHLL Trigger: AAGCAGATGATGTCTCAAAGAAAACAGTATATGCTGTAGTTTCAAGAAATGCTCAACCCACAGAGTCCAGAATCTATGATGAAATCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155802.9 |
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