Pregenerated sensors for CD82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027215Ensembl transcript IDs: ENSMUST00000028644.11, ENSMUST00000099696.8, ENSMUST00000111256.8, ENSMUST00000111257.8, ENSMUST00000116457.9, ENSMUST00000123565.8, ENSMUST00000145553.8, ENSMUST00000150508.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGTaGGAAAAAGCTAGAGAGGCCCCATGGGAGGCTGAGGGTGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: QDGPEASVVDGAGPM*EKAREAPWEAEGGE Trigger: TTCTCCACCCTCAGCCTCCCATGGGGCCTCTCTAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 90 bp | AGAAGGGCCCAGGCCCAGAAAGTTCCCAATGCAACCTTTCCAGGATaGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RRAQAQKVPNATFPG*ARGLSGGWSRAHVR Trigger: TCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGGGCCTGGGCCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR GCA 90 bp | AAGGCACAGCCTCACCCACCCTTAGCGCAGAGGACAGGGGACAGCTaGCAAGAAACACCAGTCCAGATCCTCCTCTCATCCAGGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KAQPHPPLAQRTGDS*QETPVQILLSSRVL Trigger: CAAGACCCTGGATGAGAGGAGGATCTGGACTGGTGTTTCTTGGCAGCTGTCCCCTGTCCTCTGCGCTAAGGGTGGGTGAGGCTGTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 90 bp | GGCAGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTaGCAGAAGGACAGGGAGAAGGGCCCAGGCCCAGAAAGTTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GSRKKGHRIARAPYW*QKDREKGPGPESSQ Trigger: TTGGGAACTTTCTGGGCCTGGGCCCTTCTCCCTGTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 90 bp | GAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTaGTGGATGGAGCAGGGCCCATGTGAGAAAAAGCTAGAGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: ESSQCNLSRMGQRPQ*WMEQGPCEKKLERP Trigger: GGGCCTCTCTAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR GCA 90 bp | AACCCCACCAACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTaGTACACCCACCCTCCCTGGTTTTTAATACAATACAATATGACT | + |
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Preference number: 1 (lower is better) Translates to: NPTNLSCGLSLGSYG*YTHPPWFLIQYNMT Trigger: AGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGTTGGTGGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR TCA 90 bp | CAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGGGCCCCATGGGAGGCTaGGGGTGGAGAAATAGGACG | + |
|
Preference number: 2 (lower is better) Translates to: QPFQDGPEASVVDGAGPMGPMGG*GWRNRT Trigger: CGTCCTATTTCTCCACCCTCAGCCTCCCATGGGGCC...CATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTGAACTGAGCGGCCTCAGTGGTGGATaGAGCAGGGCCCATGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TWASPPGGPSVQFPAELSGLSGG*SRAHVR Trigger: TCTCACATGGGCCCTGCTCCATCCACCACTGAGGCC...GCTCAGTTCAGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTAGGGCCCCATATTGGTaGCAGAAGGACAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GAHQRLPGPVPQEAPQFSRAPYW*QKDREK Trigger: CTTCTCCCTGTCCTTCTGCCACCAATATGGGGCCCT...ACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | CAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGGCTAGAGAGGCCCCATaGGAGGCTGAGGGTGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QPFQDGPEASVVDGAGPMAREAP*EAEGGE Trigger: TTCTCCACCCTCAGCCTCCCATGGGGCCTCTCTAGC...CATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCCTGGCCTCAGTGGTGGATaGAGCAGGGCCCATGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TFPVAFPWAATGATPTLPGLSGG*SRAHVR Trigger: TCTCACATGGGCCCTGCTCCATCCACCACTGAGGCC...AGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGAAGGACGCTAGAGAGGCCCCATaGGAGGCTGAGGGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRKKGHRIARAPYWWQKDAREAP*EAEGGE Trigger: TTCTCCACCCTCAGCCTCCCATGGGGCCTCTCTAGC...GTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAGCTAGAGAGGCCCCATaGGAGGCTGAGGGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QKVPNATFPGWARGLSGGAREAP*EAEGGE Trigger: TTCTCCACCCTCAGCCTCCCATGGGGCCTCTCTAGC...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGAAGGACCAGAGGCCTCAGTGGTaGATGGAGCAGGGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: SRKKGHRIARAPYWWQKDQRPQW*MEQGPC Trigger: ACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTG...GTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTAATATGACTTCAGGGTaGAGACACAGCTATCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ERTRGYLGQSPRRPLSSVNMTSG*RHSYPV Trigger: CACAGGATAGCTGTGTCTCCACCCTGAAGTCATATT...AACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACATGGAAAACCTAGGCCCCATGGGAGGCTaGGGGTGGAGAAATAGGACG | + |
|
Preference number: 2 (lower is better) Translates to: QVCGRIAYPVSHRNMENLGPMGG*GWRNRT Trigger: CGTCCTATTTCTCCACCCTCAGCCTCCCATGGGGCC...TAGGTTTTCCATGTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGAAGGACCCAGAAAGTTCCCAATaGAACCTTTCCAGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRKKGHRIARAPYWWQKDPESSQ*NLSRMG Trigger: GCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGG...GTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGGAGTGCTCCAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACCCAGAAAGTTCCCAATaGAACCTTTCCAGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: GGVLQVCGRIAYPVSHRNPESSQ*NLSRMG Trigger: GCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGG...GTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTGGAGCACTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACACAGGGCCAGAGGCCTCAGTaGTGGATGGAGCAGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PPSLVFNTIQYDFRVETQGQRPQ*WMEQGP Trigger: TGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCC...CTGTGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTGAACTGAGCTCTCCCACAGAAACATaGAAAACCTATGAAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: TWASPPGGPSVQFPAELSSPTET*KTYEES Trigger: ACTTTCTTCATAGGTTTTCCATGTTTCTGTGGGAGA...GCTCAGTTCAGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACACAGGGCCCCATGGGAGGCTaGGGGTGGAGAAATAGGACG | + |
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Preference number: 2 (lower is better) Translates to: PPSLVFNTIQYDFRVETQGPMGG*GWRNRT Trigger: CGTCCTATTTCTCCACCCTCAGCCTCCCATGGGGCC...CTGTGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCATCCAGGGTCTTGTGCCAGACCTGAGGGACCCACACCCCTAAGTTGTCAGAACATGGAAAACCTATaGAGAAAGTGTGACAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SHPGSCARPEGPTPLSCQNMENL*RKCDSG Trigger: CCCACTGTCACACTTTCTTCATAGGTTTTCCATGTT...CTGACAACTTAGGGGTGTGGGTCCCTCAGGTCTGGCACAAGACCCTGGATGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACAGCAACCTTTCCAGGATaGGCCAGAGGCCTCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: HPPSLVFNTIQYDFRVETATFPG*ARGLSG Trigger: ACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGC...TGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR GCA 90 bp | CCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACACAGCCAGAAAGTTCCCAATaGAACCTTTCCAGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: PPSLVFNTIQYDFRVETQPESSQ*NLSRMG Trigger: GCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGG...CTGTGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAATAATTGATTCCAGAGATGAGTGTATGGAACCCCTCCCCCACCCTGCATACACCCACCCTCCCTaGTTTTTAATACAATACAAT | + |
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Preference number: 2 (lower is better) Translates to: PLIIDSRDECMEPLPHPAYTHPP*FLIQYN Trigger: ATTGTATTGTATTAAAAACCAGGGAGGGTGGGTGTA...TGCAGGGTGGGGGAGGGGTTCCATACACTCATCTCTGGAATCAATTATTAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 72 bp | AGGTCCCTCACCAAGAGGAGCGCACCAGAGGCTACCTaGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RSLTKRSAPEAT*ASPPGGPSVQF Trigger: GAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTCCTCTTGGTGAGGGACCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTGAACTGAGCAGCCAGGGCCCCATATaGGTGGCAGAAGGACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: TWASPPGGPSVQFPAELSSQGPI*VAEGQG Trigger: TCCCTGTCCTTCTGCCACCAATATGGGGCCCTGGCT...GCTCAGTTCAGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR TCA 72 bp | CCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGTaGGAAAAAGCTAGAGAGGCCCCATGGGAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PEASVVDGAGPM*EKAREAPWEAE Trigger: CTCAGCCTCCCATGGGGCCTCTCTAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR GCA 72 bp | GACAGGGAGAAGGGCCCAGGCCCAGAAAGTTCCCAATaGAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: DREKGPGPESSQ*NLSRMGQRPQW Trigger: CCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGGGCCTGGGCCCTTCTCCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 72 bp | CAGGCCCAGAAAGTTCCCAATGCAACCTTTCCAGGATaGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QAQKVPNATFPG*ARGLSGGWSRA Trigger: GGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR GCA 72 bp | CCTCACCCACCCTTAGCGCAGAGGACAGGGGACAGCTaGCAAGAAACACCAGTCCAGATCCTCCTCTCATCC | + |
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Preference number: 3 (lower is better) Translates to: PHPPLAQRTGDS*QETPVQILLSS Trigger: GGATGAGAGGAGGATCTGGACTGGTGTTTCTTGGCAGCTGTCCCCTGTCCTCTGCGCTAAGGGTGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 72 bp | AAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTaGCAGAAGGACAGGGAGAAGGGCCCAGGCCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: KKGHRIARAPYW*QKDREKGPGPE Trigger: TTCTGGGCCTGGGCCCTTCTCCCTGTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 72 bp | CAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTaGTGGATGGAGCAGGGCCCATGTGAGAAAAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: QCNLSRMGQRPQ*WMEQGPCEKKL Trigger: TAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR GCA 72 bp | AACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTaGTACACCCACCCTCCCTGGTTTTTAATACAATAC | + |
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Preference number: 3 (lower is better) Translates to: NLSCGLSLGSYG*YTHPPWFLIQY Trigger: GTATTGTATTAAAAACCAGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACATGGAAAACCTAAGCCAGGGCCCCATATaGGTGGCAGAAGGACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: QVCGRIAYPVSHRNMENLSQGPI*VAEGQG Trigger: TCCCTGTCCTTCTGCCACCAATATGGGGCCCTGGCT...TAGGTTTTCCATGTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| 3UTR CCA 72 bp | CCCTGGTTTTTAATACAATACAATATGACTTCAGGGTaGAGACACAGCTATCCTGTGTACAGTAATACTGGG | + |
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Preference number: 3 (lower is better) Translates to: PWFLIQYNMTSG*RHSYPVYSNTG Trigger: CCCAGTATTACTGTACACAGGATAGCTGTGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTATGCCGAAGTTCTCCTaGAGCCACGCCTGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PEATWASPPGGPSVQFPAMPKFS*SHACAF Trigger: GAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCAT...AGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | ACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCCTCCCAGCCACAGCACTTaGCCTGCGCCTGCACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: TFPVAFPWAATGATPTLPPSHST*PAPARS Trigger: ACTACGTGCAGGCGCAGGTCAAGTGCTGTGGCTGGG...AGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | GGAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTGGTTGTCCTCTTCCTTaGTCTTCTCGCAGGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: GAHQRLPGPVPQEAPQFSGCPLP*SSRRSM Trigger: CATGCTCCTGCGAGAAGATCAAGGAAGAGGACAACC...ACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | CAACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCAGCAGCGGACCTCATTaGCAGCACCGATACAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QPFLWPFPGQLRVLHPPSSSGPH*QHRYSP Trigger: TGGGCTGTATCGGTGCTGTCAATGAGGTCCGCTGCT...GGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | TTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCACCCAGCCACAGCACTTaGCCTGCGCCTGCACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FPMQPFQDGPEASVVDGAPSHST*PAPARS Trigger: ACTACGTGCAGGCGCAGGTCAAGTGCTGTGGCTGGG...TGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR CCA 90 bp | GAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTACCGGCACAAACATATaGACAGGAACAACCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ERTRGYLGQSPRRPLSSVTGTNI*TGTTPA Trigger: TGCTGGGGTTGTTCCTGTCCATATGTTTGTGCCGGT...AACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR TCA 90 bp | CAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGGGTTGTCCTCTTCCTTaGTCTTCTCGCAGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPFQDGPEASVVDGAGPMGCPLP*SSRRSM Trigger: CATGCTCCTGCGAGAAGATCAAGGAAGAGGACAACC...CATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGTGAGAAAAAGCTAATGCCGAAGTTCTCCTaGAGCCACGCCTGCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPQWWMEQGPCEKKLMPKFS*SHACAF Trigger: GAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCAT...TAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCAGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGCCTGCGCCTTCTCCATaGAGCCCTCAGTGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGSRKKGHRIARAPYWWQPAPSP*SPQCSQ Trigger: CTGTGAACACTGAGGGCTGCATGGAGAAGGCGCAGG...CTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTTTGTAGGACGGAAATaGAGCTGTTCTTGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GAHQRLPGPVPQEAPQFSFVGRK*SCSCLQ Trigger: TTGCAGACAAGAACAGCTTCATTTCCGTCCTACAAA...ACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAAGCAGCGGACCTCATTaGCAGCACCGATACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPMQPFQDGPEASVVDGASSGPH*QHRYSP Trigger: TGGGCTGTATCGGTGCTGTCAATGAGGTCCGCTGCT...TGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAATGCCGAAGTTCTCCTaGAGCCACGCCTGCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGMPKFS*SHACAF Trigger: GAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCAT...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCCTACCGGCACAAACATATaGACAGGAACAACCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFPVAFPWAATGATPTLPTGTNI*TGTTPA Trigger: TGCTGGGGTTGTTCCTGTCCATATGTTTGTGCCGGT...AGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAACCCCAGCAGCTCAATaGCAGCAACACCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: FPMQPFQDGPEASVVDGATPAAQ*QQHQHT Trigger: TGTGTGCTGGTGTTGCTGTCATTGAGCTGCTGGGGT...TGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCGAAGCTGTTCTTGTCTaGAAGAATCCACACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPFLWPFPGQLRVLHPPSEAVLV*KNPHPE Trigger: TTCGGGGTGTGGATTCTTGCAGACAAGAACAGCTTC...GGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGACCTGCGCCTTCTCCATaGAGCCCTCAGTGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGPAPSP*SPQCSQ Trigger: CTGTGAACACTGAGGGCTGCATGGAGAAGGCGCAGG...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAACCCCAGCAGCTCAATaGCAGCAACACCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGTPAAQ*QQHQHT Trigger: TGTGTGCTGGTGTTGCTGTCATTGAGCTGCTGGGGT...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTGAACTGAGCAGTACTTGGGGACCTTaGTGTAGTCTTCAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TWASPPGGPSVQFPAELSSTWGP*CSLQNE Trigger: TTCATTCTGAAGACTACAGCAAGGTCCCCAAGTACT...GCTCAGTTCAGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTAATAATTGATTCCAGAGATGAGTGTATGGAACCCCTCCCCCACCCTGCACCCAGCCACAGCACTTaGCCTGCGCCTGCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLIIDSRDECMEPLPHPAPSHST*PAPARS Trigger: ACTACGTGCAGGCGCAGGTCAAGTGCTGTGGCTGGG...TGCAGGGTGGGGGAGGGGTTCCATACACTCATCTCTGGAATCAATTATTAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAGGTTGTCCTCTTCCTTaGTCTTCTCGCAGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGGCPLP*SSRRSM Trigger: CATGCTCCTGCGAGAAGATCAAGGAAGAGGACAACC...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCAGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGGAAGCTGTTCTTGTCTaGAAGAATCCACACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSRKKGHRIARAPYWWQEAVLV*KNPHPE Trigger: TTCGGGGTGTGGATTCTTGCAGACAAGAACAGCTTC...CTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | ACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCCTAGTACTTGGGGACCTTaGTGTAGTCTTCAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFPVAFPWAATGATPTLPSTWGP*CSLQNE Trigger: TTCATTCTGAAGACTACAGCAAGGTCCCCAAGTACT...AGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | TCTCATCCAGGGTCTTGTGCCAGACCTGAGGGACCCACACCCCTAAGTTGTCAGGAAGCTGTTCTTGTCTaGAAGAATCCACACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHPGSCARPEGPTPLSCQEAVLV*KNPHPE Trigger: TTCGGGGTGTGGATTCTTGCAGACAAGAACAGCTTC...CTGACAACTTAGGGGTGTGGGTCCCTCAGGTCTGGCACAAGACCCTGGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGCAGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGTTTGTAGGACGGAAATaGAGCTGTTCTTGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSRKKGHRIARAPYWWQFVGRK*SCSCLQ Trigger: TTGCAGACAAGAACAGCTTCATTTCCGTCCTACAAA...CTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGTGAGAAAAAGCTATTTGTAGGACGGAAATaGAGCTGTTCTTGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPQWWMEQGPCEKKLFVGRK*SCSCLQ Trigger: TTGCAGACAAGAACAGCTTCATTTCCGTCCTACAAA...TAGCTTTTTCTCACATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAATCCTTTCTTCACAATaGGCTGGTTGTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGILSSQ*AGCPLP Trigger: AGGAAGAGGACAACCAGCTCATTGTGAAGAAAGGAT...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGTGCTCCAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACATCCTTTCTTCACAATaGGCTGGTTGTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGVLQVCGRIAYPVSHRNILSSQ*AGCPLP Trigger: AGGAAGAGGACAACCAGCTCATTGTGAAGAAAGGAT...GTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTGGAGCACTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGTTTTCGCTCACAGTaGTGTTATCAGCCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGCFRSQ*CYQPHR Trigger: TCTGTGAGGCTGATAACAGCACTGTGAGCGAAAACA...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACATGGAAAACCTACCTGCGCCTTCTCCATaGAGCCCTCAGTGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QVCGRIAYPVSHRNMENLPAPSP*SPQCSQ Trigger: CTGTGAACACTGAGGGCTGCATGGAGAAGGCGCAGG...TAGGTTTTCCATGTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGAAGTACTTGGGGACCTTaGTGTAGTCTTCAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKVPNATFPGWARGLSGGSTWGP*CSLQNE Trigger: TTCATTCTGAAGACTACAGCAAGGTCCCCAAGTACT...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGTGGAAGAATTGCCTACCCTGTCTCCCACAGAAACATGGAAAACCTAACCGGCACAAACATATaGACAGGAACAACCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCGRIAYPVSHRNMENLTGTNI*TGTTPA Trigger: TGCTGGGGTTGTTCCTGTCCATATGTTTGTGCCGGT...TAGGTTTTCCATGTTTCTGTGGGAGACAGGGTAGGCAATTCTTCCACACACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
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| CDS-3UTR GCA 90 bp | CACCCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACATGTTTTCGCTCACAGTaGTGTTATCAGCCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPPSLVFNTIQYDFRVETCFRSQ*CYQPHR Trigger: TCTGTGAGGCTGATAACAGCACTGTGAGCGAAAACA...TGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR TCA 90 bp | ATACAATACAATATGACTTCAGGGTGGAGACACAGCTATCCTGTGTACAGTAATATCCTTTCTTCACAATaGGCTGGTTGTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQYNMTSGWRHSYPVYSNILSSQ*AGCPLP Trigger: AGGAAGAGGACAACCAGCTCATTGTGAAGAAAGGAT...ATTACTGTACACAGGATAGCTGTGTCTCCACCCTGAAGTCATATTGTATTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | GAGCGCACCAGAGGCTACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTAAGCAGCGGACCTCATaGACAGCACCGATACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERTRGYLGQSPRRPLSSVKQRTS*TAPIQP Trigger: GGGCTGTATCGGTGCTGTCAATGAGGTCCGCTGCTT...AACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGTAGCCTCTGGTGCGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAGGGCCCATGAAGCAGCGGACCTCATaGACAGCACCGATACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPFQDGPEASVVDGAGPMKQRTS*TAPIQP Trigger: GGGCTGTATCGGTGCTGTCAATGAGGTCCGCTGCTT...CATGGGCCCTGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGCCAGTCCCCCAGGAGGCCCCTCAGTTCAGTTCCCTGCTGAACTGAGCGGCCAATCCTCAGGGTaGTTTTCGCTCACAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWASPPGGPSVQFPAELSGQSSG*FSLTVL Trigger: CAGCACTGTGAGCGAAAACAACCCTGAGGATTGGCC...GCTCAGTTCAGCAGGGAACTGAACTGAGGGGCCTCCTGGGGGACTGGCCCAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCCTGTGGCCTTTCCCTGGGCAGCTACGGGTGCTACACCCACCCTCCCTGGCCAATCCTCAGGGTaGTTTTCGCTCACAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPVAFPWAATGATPTLPGQSSG*FSLTVL Trigger: CAGCACTGTGAGCGAAAACAACCCTGAGGATTGGCC...AGGGAGGGTGGGTGTAGCACCCGTAGCTGCCCAGGGAAAGGCCACAGGAAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS TCA 90 bp | ACAGCAACACCAGCACACACGCCCAGAAGGATGCCGAAGTTCTCCTaGAGCCACGCCTGCGCCTTCTCCATGCAGCCCTCAGTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TATPAHTPRRMPKFS*SHACAFSMQPSVFT Trigger: TGTGAACACTGAGGGCTGCATGGAGAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCATCCTTCTGGGCGTGTGTGCTGGTGTTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
||
| CDS GCA 90 bp | GAAGGATGCCGAAGTTCTCCTGAAGCCACGCCTGCGCCTTCTCCATaGAGCCCTCAGTGTTCACAGGCCAATCCTCAGGGTTGTTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EGCRSSPEATPAPSP*SPQCSQANPQGCFR Trigger: GCGAAAACAACCCTGAGGATTGGCCTGTGAACACTGAGGGCTGCATGGAGAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCATCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATGGAGCAAAGCAGCGGACCTCATaGACAGCACCGATACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPMQPFQDGPEASVVDGAKQRTS*TAPIQP Trigger: GGGCTGTATCGGTGCTGTCAATGAGGTCCGCTGCTT...TGCTCCATCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAAGAAAGGCCACAGGATAGCCAGGGCCCCATATTGGTGGCAGAAGGACGGCCAATCCTCAGGGTaGTTTTCGCTCACAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRKKGHRIARAPYWWQKDGQSSG*FSLTVL Trigger: CAGCACTGTGAGCGAAAACAACCCTGAGGATTGGCC...GTCCTTCTGCCACCAATATGGGGCCCTGGCTATCCTGTGGCCTTTCTTCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS TCA 90 bp | TGTACCGGCACAAACATATGGACAGGAACAACCCCAGCAGCTCAATaGCAGCAACACCAGCACACACGCCCAGAAGGATGCCGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTGTNIWTGTTPAAQ*QQHQHTRPEGCRSS Trigger: AGAACTTCGGCATCCTTCTGGGCGTGTGTGCTGGTGTTGCTGTCATTGAGCTGCTGGGGTTGTTCCTGTCCATATGTTTGTGCCGGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
||
| CDS GCA 90 bp | CAGCTTGTCAGCGTTGAAGTAGAAGAGGACCCCTACGGTCACCTGTaGGATGAGGATCAGCAGAAGGAAGACAAAGTACAGACCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QLVSVEVEEDPYGHL*DEDQQKEDKVQTQQ Trigger: TTGCTGGGTCTGTACTTTGTCTTCCTTCTGCTGATCCTCATCGCACAGGTGACCGTAGGGGTCCTCTTCTACTTCAACGCTGACAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 ENSMUST00000123565.8 ENSMUST00000145553.8 ENSMUST00000150508.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGTTCCCAATGCAACCTTTCCAGGATGGGCCAGAGGCCTCAGTGGTGGATTCACAATGAGCTGGTaGTCCTCTTCCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKVPNATFPGWARGLSGGFTMSW*SSSLIF Trigger: GAAGATCAAGGAAGAGGACAACCAGCTCATTGTGAA...TCCACCACTGAGGCCTCTGGCCCATCCTGGAAAGGTTGCATTGGGAACTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS-3UTR CAA 90 bp | CCACCCTCCCTGGTTTTTAATACAATACAATATGACTTCAGGGTGGAGACACAGTTCACAATGAGCTGGTaGTCCTCTTCCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSLVFNTIQYDFRVETQFTMSW*SSSLIF Trigger: GAAGATCAAGGAAGAGGACAACCAGCTCATTGTGAA...CTGTGTCTCCACCCTGAAGTCATATTGTATTGTATTAAAAACCAGGGAGGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000116457.9 |
||
| CDS TCA 72 bp | CCAGCACACACGCCCAGAAGGATGCCGAAGTTCTCCTaGAGCCACGCCTGCGCCTTCTCCATGCAGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAHTPRRMPKFS*SHACAFSMQPS Trigger: TGAGGGCTGCATGGAGAAGGCGCAGGCGTGGCTTCAGGAGAACTTCGGCATCCTTCTGGGCGTGTGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
||
| CDS CAA 90 bp | TGCAGCGAGCTGGATGAGGTTTGTAGGACGGAAATGAAGCTGTTCTaGTCTGCAAGAATCCACACCCCGAAGCCCAGGATCACAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CSELDEVCRTEMKLF*SARIHTPKPRITAP Trigger: GGGTGCTGTGATCCTGGGCTTCGGGGTGTGGATTCTTGCAGACAAGAACAGCTTCATTTCCGTCCTACAAACCTCATCCAGCTCGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111256.8 ENSMUST00000111257.8 ENSMUST00000116457.9 ENSMUST00000123565.8 ENSMUST00000145553.8 ENSMUST00000150508.8 |
||
| CDS TCA 72 bp | CCTGCAGCGAGCTGGATGAGGTTTGTAGGACGGAAATaGAGCTGTTCTTGTCTGCAAGAATCCACACCCCGA | + |
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Preference number: 6 (lower is better) Translates to: PAASWMRFVGRK*SCSCLQESTPR Trigger: TCGGGGTGTGGATTCTTGCAGACAAGAACAGCTTCATTTCCGTCCTACAAACCTCATCCAGCTCGCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111256.8 ENSMUST00000111257.8 ENSMUST00000116457.9 ENSMUST00000123565.8 ENSMUST00000145553.8 ENSMUST00000150508.8 |
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| CDS TCA 72 bp | ACAAACATATGGACAGGAACAACCCCAGCAGCTCAATaGCAGCAACACCAGCACACACGCCCAGAAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: TNIWTGTTPAAQ*QQHQHTRPEGC Trigger: GCATCCTTCTGGGCGTGTGTGCTGGTGTTGCTGTCATTGAGCTGCTGGGGTTGTTCCTGTCCATATGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
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| CDS GCA 72 bp | AGCGTTGAAGTAGAAGAGGACCCCTACGGTCACCTGTaGGATGAGGATCAGCAGAAGGAAGACAAAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: SVEVEEDPYGHL*DEDQQKEDKVQ Trigger: CTGTACTTTGTCTTCCTTCTGCTGATCCTCATCGCACAGGTGACCGTAGGGGTCCTCTTCTACTTCAACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 ENSMUST00000123565.8 ENSMUST00000145553.8 ENSMUST00000150508.8 |
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| CDS CAA 72 bp | TCAGCCTCACAGAATCCTTTCTTCACAATGAGCTGGTaGTCCTCTTCCTTGATCTTCTCGCAGGAGCATGGG | + |
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Preference number: 6 (lower is better) Translates to: SASQNPFFTMSW*SSSLIFSQEHG Trigger: CCCATGCTCCTGCGAGAAGATCAAGGAAGAGGACAACCAGCTCATTGTGAAGAAAGGATTCTGTGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
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| CDS GCA 72 bp | TCACAGGCCAATCCTCAGGGTTGTTTTCGCTCACAGTaGTGTTATCAGCCTCACAGAATCCTTTCTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SQANPQGCFRSQ*CYQPHRILSSQ Trigger: TTGTGAAGAAAGGATTCTGTGAGGCTGATAACAGCACTGTGAGCGAAAACAACCCTGAGGATTGGCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
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| CDS CCA 72 bp | TTATCAGCCTCACAGAATCCTTTCTTCACAATGAGCTaGTTGTCCTCTTCCTTGATCTTCTCGCAGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSASQNPFFTMS*LSSSLIFSQEH Trigger: ATGCTCCTGCGAGAAGATCAAGGAAGAGGACAACCAGCTCATTGTGAAGAAAGGATTCTGTGAGGCTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028644.11 ENSMUST00000099696.8 ENSMUST00000111257.8 ENSMUST00000116457.9 |
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