Pregenerated sensors for CD81 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037706Ensembl transcript IDs: ENSMUST00000037941.10, ENSMUST00000141954.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTAGCTAGGCTACAAAGCCTCTGGGCAAGTAGCTGTAGAGGAGGTTaGGCTCAGCAGGCAGAACTCTCCAGGGGTCCCAGACGTACAGGG | + |
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Preference number: 2 (lower is better) Translates to: LARLQSLWASSCRGG*AQQAELSRGPRRTG Trigger: CCCTGTACGTCTGGGACCCCTGGAGAGTTCTGCCTGCTGAGCCAAACCTCCTCTACAGCTACTTGCCCAGAGGCTTTGTAGCCTAGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAATAAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAACCCCAAGGTGGCCTCTaGTCACTCCAGGGATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RKNKCIEGIRGLTNPALEPQGGL*SLQGSS Trigger: AGAGGATCCCTGGAGTGACCAGAGGCCACCTTGGGG...TTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTTATTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR-3UTR CCA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAAGGCTACAAAGCCTCTaGGCAAGTAGCTGTAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GIRGLTNPALEMEAGKEQRLQSL*ASSCRG Trigger: TCCTCTACAGCTACTTGCCCAGAGGCTTTGTAGCCT...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCATATGCCACCCATGTGTaGTGTCAGCTCCCAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KCIEGIRGLTNPALEMEAYATHV*CQLPKG Trigger: ACCTTTTGGGAGCTGACATCACACATGGGTGGCATA...TGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR-3UTR GCA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAACCTACATCCCACATATaGCACCCATGTGTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: GIRGLTNPALEMEAGKEQPTSHI*HPCVMS Trigger: TGACATCACACATGGGTGGCATATGTGGGATGTAGG...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR CCA 72 bp | CAGAAATATTATATACACAGGCCATGTCCCCCAAGGTaGCCTCTGGTCACTCCAGGGATCCTCTGGTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: QKYYIHRPCPPR*PLVTPGILWCN Trigger: ATTGCACCAGAGGATCCCTGGAGTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | ATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCACTCCAGGGATCCACTGGGACTCCTGGATaGCCCCATAGCACCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IIYTGHVPQGGLWSLQGSTGTPG*PHSTPG Trigger: TCCTGGGGTGCTATGGGGCCATCCAGGAGTCCCAGT...GGATCCCTGGAGTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| 3UTR CAA 72 bp | CTACAAAGCCTCTGGGCAAGTAGCTGTAGAGGAGGTTaGGCTCAGCAGGCAGAACTCTCCAGGGGTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LQSLWASSCRGG*AQQAELSRGPR Trigger: TCTGGGACCCCTGGAGAGTTCTGCCTGCTGAGCCAAACCTCCTCTACAGCTACTTGCCCAGAGGCTTTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | TTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCACTCCAGGGATCCTGGTACAGCAGGCTGGTaGTCTGTGGATCATGACGCA | + |
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Preference number: 4 (lower is better) Translates to: LYTQAMSPKVASGHSRDPGTAGW*SVDHDA Trigger: TGCGTCATGATCCACAGACCACCAGCCTGCTGTACC...AGGATCCCTGGAGTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | CAGCTCCACCCCTACATCCCACATATGCCACCCATGTGTGATGTCAGCTCCCAACCACGTAGAAGGTGTTaGGTGCCGGTTTGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLHPYIPHMPPMCDVSSQPRRRC*VPVCFP Trigger: TGGGAAACAAACCGGCACCCAACACCTTCTACGTGG...TTGGGAGCTGACATCACACATGGGTGGCATATGTGGGATGTAGGGGTGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | GATACAGAAATATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCACGTCCCCAGCAGACACTaGGACTCCTGGATGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: DTEILYTQAMSPKVASGHVPSRH*DSWMAP Trigger: TGGGGCCATCCAGGAGTCCCAGTGTCTGCTGGGGAC...GTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCTGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR GCA 90 bp | GTGATACAGAAATATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCCGGAGCTGTTCCGGATaGCACAGCACAGCACCATGC | + |
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Preference number: 4 (lower is better) Translates to: VIQKYYIHRPCPPRWPLVRSCSG*HSTAPC Trigger: GCATGGTGCTGTGCTGTGGCATCCGGAACAGCTCCG...GACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCTGTATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR TCA 90 bp | GTGATACAGAAATATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCGAGTATGTTGCCGCCTaGGGGACACAGGCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VIQKYYIHRPCPPRWPLVEYVAA*GTQAVP Trigger: AGGAACAGCCTGTGTCCCTCAGGCGGCAACATACTC...GACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCTGTATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR TCA 90 bp | GATACAGAAATATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCACCAGCTCCCACAGCAATaGGAATGTAGATGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: DTEILYTQAMSPKVASGHQLPQQ*ECRCPR Trigger: ACGTGGGCATCTACATTCTCATTGCTGTGGGAGCTG...GTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCTGTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | AGAAATATTATATACACAGGCCATGTCCCCCAAGGTGGCCTCTGGTCACTCCAGCAGTTGAGCGTCTCATaGAAAGTCTTCACCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RNIIYTGHVPQGGLWSLQQLSVS*KVFTTA Trigger: GGCTGTGGTGAAGACTTTCCATGAGACGCTCAACTG...CTGGAGTGACCAGAGGCCACCTTGGGGGACATGGCCTGTGTATATAATATTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR GCA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAACACAGCACAGCACCATaGTCAGAATCATCTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GIRGLTNPALEMEAGKEQHSTAP*SESSQR Trigger: TCTTTGAGATGATTCTGAGCATGGTGCTGTGCTGTG...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | CCACCCATGTGTGATGTCAGCTCCCAAAAGGTAACAGGAAAAGTTCAGGACAAATCTTCACCACAGCCTTaGCATTGTTGGCATCATCAT | + |
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Preference number: 4 (lower is better) Translates to: PPMCDVSSQKVTGKVQDKSSPQP*HCWHHH Trigger: ATGATGATGCCAACAATGCCAAGGCTGTGGTGAAGA...TTTGTCCTGAACTTTTCCTGTTACCTTTTGGGAGCTGACATCACACATGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR TCA 90 bp | ACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAAGATTAAAAAGATGTGCCAGAAGACGAAATTaGAGACGAAGAGCAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: TNPALEMEAGKEQRLKRCARRRN*RRRAGI Trigger: AATACCTGCTCTTCGTCTTCAATTTCGTCTTCTGGC...ACATCTTTTTAATCTTTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR GCA 90 bp | ACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAAGATTAAAAAGATGTAGCTACCACAATGGCTaGAATTCCAATGAGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: TNPALEMEAGKEQRLKRCSYHNG*NSNEVQ Trigger: CTGTACCTCATTGGAATTGCAGCCATTGTGGTAGCT...ACATCTTTTTAATCTTTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CCA 90 bp | AGAAAGAATAAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAAACTGCTTCACATCCTTaGCGATCTGGTCTTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: RKNKCIEGIRGLTNPALETASHP*RSGLCL Trigger: TAAACAAAGACCAGATCGCCAAGGATGTGAAGCAGT...TTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTTATTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS TCA 90 bp | TTGTTTCCCAGTTCCAGGTACAGCAGGCTGGTGGTCTGTGGATCATaGCGCAACCACAGAGCTACACCTAGGATCACGCCTCCAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LFPSSRYSRLVVCGS*RNHRATPRITPPAS Trigger: GCTGGCTGGAGGCGTGATCCTAGGTGTAGCTCTGTGGTTGCGTCATGATCCACAGACCACCAGCCTGCTGTACCTGGAACTGGGAAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS GCA 90 bp | TCCCACAGCAATGAGAATGTAGATGCCCACGTAGAAGGTGTTGGGTaGCGGTTTGTTTCCCAGTTCCAGGTACAGCAGGCTGGTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SHSNENVDAHVEGVG*RFVSQFQVQQAGGL Trigger: CAGACCACCAGCCTGCTGTACCTGGAACTGGGAAACAAACCGGCACCCAACACCTTCTACGTGGGCATCTACATTCTCATTGCTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS CCA 90 bp | TGTTGGGTGCCGGTTTGTTTCCCAGTTCCAGGTACAGCAGGCTGGTaGTCTGTGGATCATGACGCAACCACAGAGCTACACCTAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: CWVPVCFPVPGTAGW*SVDHDATTELHLGS Trigger: TGATCCTAGGTGTAGCTCTGTGGTTGCGTCATGATCCACAGACCACCAGCCTGCTGTACCTGGAACTGGGAAACAAACCGGCACCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | AAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAAGGTATTTGATGCATTaGGTGCAGCCCTCCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: KCIEGIRGLTNPALEMEARYLMH*VQPSTP Trigger: GGGGGTGGAGGGCTGCACCAAATGCATCAAATACCT...TGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAATCATCCATCACAGCTaGCTGAAGGGCCTGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: GIRGLTNPALEMEAGKEQIIHHS*LKGLVI Trigger: TATGACCAGGCCCTTCAGCAAGCTGTGATGGATGAT...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAACCACAGCCTTGGCATaGTTGGCATCATCATCCATC | + |
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Preference number: 5 (lower is better) Translates to: GIRGLTNPALEMEAGKEQTTALA*LASSSI Trigger: GATGGATGATGATGCCAACAATGCCAAGGCTGTGGT...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | AAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCATTGGCGATCTGGTCTTaGTTTACGAAGCCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: KCIEGIRGLTNPALEMEALAIWS*FTKPQM Trigger: CATCTGGGGCTTCGTAAACAAAGACCAGATCGCCAA...TGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | GGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAACAGCCTTGGCATTGTaGGCATCATCATCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: GIRGLTNPALEMEAGKEQTALAL*ASSSIT Trigger: TGTGATGGATGATGATGCCAACAATGCCAAGGCTGT...TTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | AAGTGCATTGAAGGCATAAGAGGGCTTACAAACCCAGCTCTTGAAATGGAGGCAAACTGCTTCACATCCTaGGCGATCTGGTCTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: KCIEGIRGLTNPALEMEANCFTS*AIWSLF Trigger: AAACAAAGACCAGATCGCCAAGGATGTGAAGCAGTT...TGCCTCCATTTCAAGAGCTGGGTTTGTAAGCCCTCTTATGCCTTCAATGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | ACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAAGATTAAAAAGATGTACGAAGAGCAGGTATTaGATGCATTTGGTGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: TNPALEMEAGKEQRLKRCTKSRY*MHLVQP Trigger: GGGCTGCACCAAATGCATCAAATACCTGCTCTTCGT...ACATCTTTTTAATCTTTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS-3UTR CAA 90 bp | ACAAACCCAGCTCTTGAAATGGAGGCAGGAAAGGAACAAAGATTAAAAAGATGTGTCTTCACCACAGCCTaGGCATTGTTGGCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: TNPALEMEAGKEQRLKRCVFTTA*ALLASS Trigger: TGATGATGCCAACAATGCCAAGGCTGTGGTGAAGAC...ACATCTTTTTAATCTTTGTTCCTTTCCTGCCTCCATTTCAAGAGCTGGGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS TCA 72 bp | AGTTCCAGGTACAGCAGGCTGGTGGTCTGTGGATCATaGCGCAACCACAGAGCTACACCTAGGATCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSRYSRLVVCGS*RNHRATPRITP Trigger: AGGCGTGATCCTAGGTGTAGCTCTGTGGTTGCGTCATGATCCACAGACCACCAGCCTGCTGTACCTGGAACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS CCA 72 bp | CCGGTTTGTTTCCCAGTTCCAGGTACAGCAGGCTGGTaGTCTGTGGATCATGACGCAACCACAGAGCTACAC | + |
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Preference number: 6 (lower is better) Translates to: PVCFPVPGTAGW*SVDHDATTELH Trigger: GTGTAGCTCTGTGGTTGCGTCATGATCCACAGACCACCAGCCTGCTGTACCTGGAACTGGGAAACAAACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS CCA 72 bp | GTCAGTGCGTTGGAGCCACAACAGTTGAGCGTCTCATaGAAAGTCTTCACCACAGCCTTGGCATTGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSALEPQQLSVS*KVFTTALALLA Trigger: TGCCAACAATGCCAAGGCTGTGGTGAAGACTTTCCATGAGACGCTCAACTGTTGTGGCTCCAACGCACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS CAA 72 bp | GTAGTCAGTGTGGTCAGTGCGTTGGAGCCACAACAGTaGAGCGTCTCATGGAAAGTCTTCACCACAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVSVVSALEPQQ*SVSWKVFTTAL Trigger: CAAGGCTGTGGTGAAGACTTTCCATGAGACGCTCAACTGTTGTGGCTCCAACGCACTGACCACACTGACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS CAA 90 bp | CACAGGCTGTTCCTCAGTATGGTGGTAGTCAGTGTGGTCAGTGCGTaGGAGCCACAACAGTTGAGCGTCTCATGGAAAGTCTTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: HRLFLSMVVVSVVSA*EPQQLSVSWKVFTT Trigger: TGTGGTGAAGACTTTCCATGAGACGCTCAACTGTTGTGGCTCCAACGCACTGACCACACTGACTACCACCATACTGAGGAACAGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS CAA 90 bp | AGTATGGTGGTAGTCAGTGTGGTCAGTGCGTTGGAGCCACAACAGTaGAGCGTCTCATGGAAAGTCTTCACCACAGCCTTGGCATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SMVVVSVVSALEPQQ*SVSWKVFTTALALL Trigger: CAACAATGCCAAGGCTGTGGTGAAGACTTTCCATGAGACGCTCAACTGTTGTGGCTCCAACGCACTGACCACACTGACTACCACCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS GCA 72 bp | AATGAGAATGTAGATGCCCACGTAGAAGGTGTTGGGTaGCGGTTTGTTTCCCAGTTCCAGGTACAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NENVDAHVEGVG*RFVSQFQVQQA Trigger: AGCCTGCTGTACCTGGAACTGGGAAACAAACCGGCACCCAACACCTTCTACGTGGGCATCTACATTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037941.10 |
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| CDS CAA 72 bp | TTCCTCAGTATGGTGGTAGTCAGTGTGGTCAGTGCGTaGGAGCCACAACAGTTGAGCGTCTCATGGAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLSMVVVSVVSA*EPQQLSVSWKV Trigger: GACTTTCCATGAGACGCTCAACTGTTGTGGCTCCAACGCACTGACCACACTGACTACCACCATACTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS CCA 72 bp | TCTCATGGAAAGTCTTCACCACAGCCTTGGCATTGTTaGCATCATCATCCATCACAGCTTGCTGAAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SHGKSSPQPWHC*HHHPSQLAEGP Trigger: AGGCCCTTCAGCAAGCTGTGATGGATGATGATGCCAACAATGCCAAGGCTGTGGTGAAGACTTTCCATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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| CDS CAA 72 bp | CAGTTGAGCGTCTCATGGAAAGTCTTCACCACAGCCTaGGCATTGTTGGCATCATCATCCATCACAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QLSVSWKVFTTA*ALLASSSITAC Trigger: GCAAGCTGTGATGGATGATGATGCCAACAATGCCAAGGCTGTGGTGAAGACTTTCCATGAGACGCTCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037941.10 ENSMUST00000141954.2 |
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