Pregenerated sensors for CD79B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040592Ensembl transcript IDs: ENSMUST00000044228.11, ENSMUST00000167143.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTCCAGCTTCAGACGCTGGCCGGGGTATCCAGGAAGCAGGGAATaGGCTTGTGAGCCAGGCGGTTTGGAAGCAGTGAGGCCCAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: WSSFRRWPGYPGSRE*ACEPGGLEAVRPKS Trigger: ACTCTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACAAGCCCATTCCCTGCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 90 bp | GTCACCACCCTATTGTCCTTCCACCCCAGGCCCTTCAGCAAGAGCTaGGGACCAGGGGCTAGAATGAGAGGTGGTATTGATGGTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: VTTLLSFHPRPFSKS*GPGARMRGGIDGPA Trigger: AGCTGGACCATCAATACCACCTCTCATTCTAGCCCCTGGTCCCCAGCTCTTGCTGAAGGGCCTGGGGTGGAAGGACAATAGGGTGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 90 bp | GTCCCAAACATGGGGACAGATCCCACATGGCACTCCCAGAAGCCTTaGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: VPNMGTDPTWHSQKP*VKSIPRELLTPCHH Trigger: GTGGTGACATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 90 bp | ACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATaGCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: TSLCFPVPNMGTDPT*HSQKPWVKSIPREL Trigger: GAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 90 bp | TCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATaGGGACAGATCCCACATGGCACTCCCAGAAGCCTTGGGTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SICRFQQVSAFLSQT*GQIPHGTPRSLGSS Trigger: ACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 90 bp | TGTCAGGCACATTATTTATTCCACAGGAGGATGGGCTGTAGGCTTTaGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACT | + |
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Preference number: 1 (lower is better) Translates to: CQAHYLFHRRMGCRL*VILGMGERNGILAT Trigger: AGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAATAATGTGCCTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR TCA 90 bp | AGGCACATTATTTATTCCACAGGAGGATGGGCTGTAGGCTTTGGGTaGTCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RHIIYSTGGWAVGFG*SLEWEREMAFWQLL Trigger: AAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAATAATGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATCCCCAGAGAACTCCTTACTCCATGTCACCACCCTATTGTCCTTCCACCCAGGGAATGGGCTTGTaGGCCAGGCGGTTTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VYPQRTPYSMSPPYCPSTQGMGL*ARRFGS Trigger: GCTTCCAAACCGCCTGGCTCACAAGCCCATTCCCTG...GGTGGAAGGACAATAGGGTGGTGACATGGAGTAAGGAGTTCTCTGGGGATAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGCCCTTCAGCAAGAGCTaGGGACCAGGGGCTAGAATG | + |
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Preference number: 2 (lower is better) Translates to: ALPEALGQVYPQRTPYSMPFSKS*GPGARM Trigger: CATTCTAGCCCCTGGTCCCCAGCTCTTGCTGAAGGG...CATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CAA 90 bp | TGTCCCAAACATGGGGACAGATCCCACATGGCACTCCCAGAAGCCTaGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: CPKHGDRSHMALPEA*GQVYPQRTPYSMSP Trigger: TGGTGACATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCTCCAGCTTCAGACGCTaGCCGGGGTATCCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ALGDPWNGREKWHSGNFFSSFRR*PGYPGS Trigger: GCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGA...GAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACAGCGGTTTGGAAGCAGTaGGGCCCAAGAGTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CSESICRFQQVSAFLSQTAVWKQ*GPRVEQ Trigger: CTGCTCAACTCTTGGGCCTCACTGCTTCCAAACCGC...TGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACACCCTTCAGCAAGAGCTaGGGACCAGGGGCTAGAATG | + |
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Preference number: 2 (lower is better) Translates to: CSESICRFQQVSAFLSQTPFSKS*GPGARM Trigger: CATTCTAGCCCCTGGTCCCCAGCTCTTGCTGAAGGG...TGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CAA 90 bp | ACTTCTTCAGGTGTCAGTGTGAACCATGGTCCTCCTAGACTCCTCTaGAAGCCAGTGTGTTCTGAGTCCATTTGCAGATTCCAACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TSSGVSVNHGPPRLL*KPVCSESICRFQQV Trigger: GACTTGTTGGAATCTGCAAATGGACTCAGAACACACTGGCTTCAAGAGGAGTCTAGGAGGACCATGGTTCACACTGACACCTGAAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTTCTGAGTCCATTTaGAGATTCCAACAAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LGDPWNGREKWHSGNFFRCSESI*RFQQVS Trigger: AGAGACTTGTTGGAATCTGCAAATGGACTCAGAACA...CCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGAGCACTCCCAGAAGCCTaGGGTCAAGTCTATCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: FHRRMGCRLWVILGMGERALPEA*GQVYPQ Trigger: CTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGC...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 72 bp | CTATTGTCCTTCCACCCCAGGCCCTTCAGCAAGAGCTaGGGACCAGGGGCTAGAATGAGAGGTGGTATTGAT | + |
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Preference number: 3 (lower is better) Translates to: LLSFHPRPFSKS*GPGARMRGGID Trigger: ATCAATACCACCTCTCATTCTAGCCCCTGGTCCCCAGCTCTTGCTGAAGGGCCTGGGGTGGAAGGACAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 72 bp | ATGGGGACAGATCCCACATGGCACTCCCAGAAGCCTTaGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: MGTDPTWHSQKP*VKSIPRELLTP Trigger: TGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | GCACATTATTTATTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGATGTGAGCCAGGCGGTTaGGAAGCAGTGAGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: AHYLFHRRMGCRLWVILGCEPGG*EAVRPK Trigger: CTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACA...TCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAATAATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCCATGTCACCACCCTATaGTCCTTCCACCCCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ALGDPWNGREKWHSGNFFHVTTL*SFHPRP Trigger: GGGCCTGGGGTGGAAGGACAATAGGGTGGTGACATG...GAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGCACTCCCAGAAGCCTaGGGTCAAGTCTATCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSPFADSNKSLLSCPKHGALPEA*GQVYPQ Trigger: CTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGC...CCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGAGTGAGGCCCAAGAGTaGAGCAGGATGAAGGTGACC | + |
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Preference number: 3 (lower is better) Translates to: LSPFADSNKSLLSCPKHGSEAQE*SRMKVT Trigger: GGTCACCTTCATCCTGCTCAACTCTTGGGCCTCACT...CCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGTGAGCCAGGCGGTTaGGAAGCAGTGAGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CSESICRFQQVSAFLSQTCEPGG*EAVRPK Trigger: CTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACA...TGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | AATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACCAAGTGAGGCCCAAGAGTaGAGCAGGATGAAGGTGACC | + |
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Preference number: 3 (lower is better) Translates to: NGREKWHSGNFFRCQCEPSEAQE*SRMKVT Trigger: GGTCACCTTCATCCTGCTCAACTCTTGGGCCTCACT...TGGTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR-3UTR CAA 90 bp | GCACATTATTTATTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGACCTCCTAGACTCCTCTaGAAGCCAGTGTGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: AHYLFHRRMGCRLWVILGPPRLL*KPVCSE Trigger: CTCAGAACACACTGGCTTCAAGAGGAGTCTAGGAGG...TCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAATAATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR TCA 72 bp | ATTTATTCCACAGGAGGATGGGCTGTAGGCTTTGGGTaGTCCTTGGAATGGGAGAGAGAAATGGCATTCTGG | + |
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Preference number: 3 (lower is better) Translates to: IYSTGGWAVGFG*SLEWEREMAFW Trigger: CCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CCA 72 bp | CATTATTTATTCCACAGGAGGATGGGCTGTAGGCTTTaGGTGATCCTTGGAATGGGAGAGAGAAATGGCATT | + |
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Preference number: 3 (lower is better) Translates to: HYLFHRRMGCRL*VILGMGERNGI Trigger: AATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAATAAATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | ATGGTCCAGCTTCAGACGCTGGCCGGGGTATCCAGGAAGCAGGGAATGGGCTTGAGGAACAACAGCCAGTaGCAGGGCATGGAAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: MVQLQTLAGVSRKQGMGLRNNSQ*QGMEDS Trigger: GCTGTCTTCCATGCCCTGCCACTGGCTGTTGTTCCT...CAAGCCCATTCCCTGCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAATGGGCTTGTGAGCCAGGCGGTTTGGAAGCAGTGAGGCCCAAGAGTGGGTGCTGCCAGATCTaGGAACAAGGGCTTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SREWACEPGGLEAVRPKSGCCQI*EQGLPW Trigger: CCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCC...ACTCTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACAAGCCCATTCCCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGAACTCCTTACTCCATGTCACCACCCTATTGTCCTTCCACCCCAGGCTATGTCAGCCTGGGCTaGAGCTTGTCTCCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PQRTPYSMSPPYCPSTPGYVSLG*SLSPLR Trigger: GCGGAGAGGAGACAAGCTGCAGCCCAGGCTGACATA...GCCTGGGGTGGAAGGACAATAGGGTGGTGACATGGAGTAAGGAGTTCTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
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| CDS-3UTR GCA 90 bp | AGCAGGGAATGGGCTTGTGAGCCAGGCGGTTTGGAAGCAGTGAGGCCCAAGAGTGCTGCAAACCTCGGGTaGTGCCAGATCTGGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: SREWACEPGGLEAVRPKSAANLG*CQIWEQ Trigger: TTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGC...ACTCTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACAAGCCCATTCCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGAGCCAGTGGCAGGGCATaGAAGACAGCACCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: FHRRMGCRLWVILGMGERASGRA*KTAPVW Trigger: CCACACTGGTGCTGTCTTCCATGCCCTGCCACTGGC...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGAAGTTCCTGGGGCTGCTaGCTCCCTCGCTTTCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FHRRMGCRLWVILGMGERSSWGC*LPRFRN Trigger: GTTCCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACT...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CAA 72 bp | TCCCCAGAGAACTCCTTACTCCATGTCACCACCCTATaGTCCTTCCACCCCAGGCCCTTCAGCAAGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPENSLLHVTTL*SFHPRPFSKSW Trigger: CCAGCTCTTGCTGAAGGGCCTGGGGTGGAAGGACAATAGGGTGGTGACATGGAGTAAGGAGTTCTCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR TCA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGATCCTGCCATGCAAATTaGGACCCAGGGGAGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: FHRRMGCRLWVILGMGERSCHAN*DPGEAP Trigger: TGGTGCCTCCCCTGGGTCTCAATTTGCATGGCAGGA...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGCACTCCCATGGTACCGGCTCACCTaGGAAGAGCAGCAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KSLLSCPKHGDRSHMALPWYRLT*EEQQQE Trigger: TTCCTGCTGCTGCTCTTCTCAGGTGAGCCGGTACCA...TGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR GCA 90 bp | GGCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGGCCCCTTCCTGCCATaGAAATTGAGACCCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GTPRSLGSSLSPENSLLHGPFLP*KLRPRG Trigger: TCCCCTGGGTCTCAATTTGCATGGCAGGAAGGGGCC...ATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
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| CDS-3UTR GCA 90 bp | GGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACCATGGACCAGTTCCTGGGGCTaGTGGCTCCCTCGCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: GREKWHSGNFFRCQCEPWTSSWG*WLPRFR Trigger: CCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACTGGT...CCATGGTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGAACTCCTTACTCCATGTCACCACCCTATTGTCCTTCCACCCCAGGCCCTCCATCCCAGCCTTaGCGTCATCCTTGTCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: PQRTPYSMSPPYCPSTPGPPSQP*RHPCQV Trigger: TACTTGACAAGGATGACGGCAAGGCTGGGATGGAGG...GCCTGGGGTGGAAGGACAATAGGGTGGTGACATGGAGTAAGGAGTTCTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | CACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGTGCCAGTGGCAGGGCATaGAAGACAGCACCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSQKPWVKSIPRELLTPCASGRA*KTAPVW Trigger: CCACACTGGTGCTGTCTTCCATGCCCTGCCACTGGC...ACATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| 3UTR CAA 72 bp | CATGGGGACAGATCCCACATGGCACTCCCAGAAGCCTaGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: HGDRSHMALPEA*GQVYPQRTPYS Trigger: GGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR TCA 90 bp | CTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGTCATGGTACCGGCTCACCTaGGAAGAGCAGCAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LPEALGQVYPQRTPYSMSWYRLT*EEQQQE Trigger: TTCCTGCTGCTGCTCTTCTCAGGTGAGCCGGTACCA...TGACATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR GCA 90 bp | TTGGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGACCAGTTCCTGGGGCTaGTGGCTCCCTCGCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LGDPWNGREKWHSGNFFRTSSWG*WLPRFR Trigger: CCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACTGGT...CCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTGTGAACCATGGTCCTCCTAGACTCCTCTTGAAGCCAGTGTGTTCTGAGGGGTGCTGCCAGATCTaGGAACAAGGGCTTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VSVNHGPPRLLLKPVCSEGCCQI*EQGLPW Trigger: CCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCC...CTCAGAACACACTGGCTTCAAGAGGAGTCTAGGAGGACCATGGTTCACACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGAGTTCCTGGGGCTGCTaGCTCCCTCGCTTTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPTSLCFPVPNMGTDPTWSSWGC*LPRFRN Trigger: GTTCCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACT...CCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR GCA 90 bp | AAACATGGGGACAGATCCCACATGGCACTCCCAGAAGCCTTGGGTCAAGTCTATGCTGCAAACCTCGGGTaGTGCCAGATCTGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KHGDRSHMALPEALGQVYAANLG*CQIWEQ Trigger: TTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGC...ATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGTCCCCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGACCTCCATCCCAGCCTTaGCGTCATCCTTGTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHRRMGCRLWVILGMGERPPSQP*RHPCQV Trigger: TACTTGACAAGGATGACGGCAAGGCTGGGATGGAGG...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGCACTCCCACATTCCTGGCCTGGATaGTCTCCTACCGACCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSLLSCPKHGDRSHMALPHSWPG*SPTDHF Trigger: AAAGTGGTCGGTAGGAGAGCATCCAGGCCAGGAATG...TGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGCAAAGACAGCACCAGTGTaGCCATGGTCACTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNKSLLSCPKHGDRSHMAKTAPV*PWSLLC Trigger: ACAGAGCAGTGACCATGGCCACACTGGTGCTGTCTT...TGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGTGTGGCCATGGTCACTaGTCTGTCTCTGAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFADSNKSLLSCPKHGCGHGH*SVSEPK Trigger: CTTGGGCTCAGAGACAGAGCAGTGACCATGGCCACA...CCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGGTATTGATGGTCCAGCTTCAGACGCTGGCCGGGGTATCCAGGAAGCACTATGTCTTCATAGGTaGCTGTCTGGTCAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGIDGPASDAGRGIQEALCLHR*LSGQCS Trigger: TGAACATTGACCAGACAGCCACCTATGAAGACATAG...TGCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGACCATCAATACCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATCACTGCTCTGTCTCTaGGCCCAAGGAGGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSESICRFQQVSAFLSQTSLLCL*AQGGLG Trigger: CCCCAAACCTCCTTGGGCTCAGAGACAGAGCAGTGA...TGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
||
| CDS-3UTR GCA 90 bp | GGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACTCAGTGGCAGGTCACTaGTTGTCATTGCTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: GMGERNGILATSSGVSVNSVAGH*LSLLVP Trigger: CGGTACCAGCAATGACAAGCAGTGACCTGCCACTGA...GTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGATCAGTGGCAGGTCACTaGTTGTCATTGCTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: ESICRFQQVSAFLSQTWGSVAGH*LSLLVP Trigger: CGGTACCAGCAATGACAAGCAGTGACCTGCCACTGA...TCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR CCA 90 bp | GGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACAACTGTATGTCAGCCTaGGCTGCAGCTTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMGERNGILATSSGVSVNNCMSA*AAACLL Trigger: GAGGAGACAAGCTGCAGCCCAGGCTGACATACAGTT...GTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
||
| 3UTR CAA 72 bp | GGTGTCAGTGTGAACCATGGTCCTCCTAGACTCCTCTaGAAGCCAGTGTGTTCTGAGTCCATTTGCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSVNHGPPRLL*KPVCSESICRF Trigger: GAATCTGCAAATGGACTCAGAACACACTGGCTTCAAGAGGAGTCTAGGAGGACCATGGTTCACACTGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR GCA 90 bp | AATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACCACATTCCTGGCCTGGATaGTCTCCTACCGACCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGREKWHSGNFFRCQCEPHSWPG*SPTDHF Trigger: AAAGTGGTCGGTAGGAGAGCATCCAGGCCAGGAATG...TGGTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CCA 90 bp | TTCCACAGGAGGATGGGCTGTAGGCTTTGGGTGATCCTTGGAATGGGAGAGAGACTATGTCTTCATAGGTaGCTGTCTGGTCAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHRRMGCRLWVILGMGERLCLHR*LSGQCS Trigger: TGAACATTGACCAGACAGCCACCTATGAAGACATAG...TCTCTCTCCCATTCCAAGGATCACCCAAAGCCTACAGCCCATCCTCCTGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CCA 90 bp | CCATTCTGGGTCTGCACAATGCGTCCCTCTTCTGAGACCAGTTCCTaGGGCTGCTGGCTCCCTCGCTTTCGGAACCAGGTCAGTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PFWVCTMRPSSETSS*GCWLPRFRNQVSAP Trigger: AGGTGCACTGACCTGGTTCCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACTGGTCTCAGAAGAGGGACGCATTGTGCAGACCCAGAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | ATGGTCCAGCTTCAGACGCTGGCCGGGGTATCCAGGAAGCAGGGAATGGGCTTGTTCCTGCCATGCAAATaGAGACCCAGGGGAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: MVQLQTLAGVSRKQGMGLFLPCK*RPRGGT Trigger: GGTGCCTCCCCTGGGTCTCAATTTGCATGGCAGGAA...CAAGCCCATTCCCTGCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
||
| CDS TCA 90 bp | GGTGTAGACAGAGCCATTCTGGGTCTGCACAATGCGTCCCTCTTCTaGGACCAGTTCCTGGGGCTGCTGGCTCCCTCGCTTTCGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GVDRAILGLHNASLF*DQFLGLLAPSLSEP Trigger: TGGTTCCGAAAGCGAGGGAGCCAGCAGCCCCAGGAACTGGTCTCAGAAGAGGGACGCATTGTGCAGACCCAGAATGGCTCTGTCTACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGGAATGGGCTTGTGAGCCAGGCGGTTTGGAAGCAGTGAGGCCCAAGAGTGCCTTGCCGTCATCCTaGTCAAGTAGCAGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SREWACEPGGLEAVRPKSALPSS*SSSRKM Trigger: CATCTTCCTGCTACTTGACAAGGATGACGGCAAGGC...ACTCTTGGGCCTCACTGCTTCCAAACCGCCTGGCTCACAAGCCCATTCCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGGTATTGATGGTCCAGCTTCAGACGCTGGCCGGGGTATCCAGGAAGCATCCTCCATCCCAGCCTaGCCGTCATCCTTGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGIDGPASDAGRGIQEASSIPA*PSSLSS Trigger: ACTTGACAAGGATGACGGCAAGGCTGGGATGGAGGA...TGCTTCCTGGATACCCCGGCCAGCGTCTGAAGCTGGACCATCAATACCACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGAGCCTGGGCTGCAGCTaGTCTCCTCTCCGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPTSLCFPVPNMGTDPTWSLGCS*SPLRLF Trigger: GAAGAGGCGGAGAGGAGACAAGCTGCAGCCCAGGCT...CCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044228.11 |
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| CDS-3UTR CAA 90 bp | GCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATGGGTCACTGCTTGTCATaGCTGGTACCGGCTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALPEALGQVYPQRTPYSMGHCLS*LVPAHL Trigger: CAGGTGAGCCGGTACCAGCAATGACAAGCAGTGACC...CATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATATGGAGCTCCGCTTTTaGGCTGCAAACCTCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTPRSLGSSLSPENSLLHMELRF*AANLGC Trigger: GCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCAT...ATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGCACTCCCAGTTCCGCCGCTTCAGTaGGTCCAACGTGCTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLSCPKHGDRSHMALPVPPLQ*VQRAES Trigger: GGATTCAGCACGTTGGACCAACTGAAGCGGCGGAAC...TGGGAGTGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS GCA 90 bp | AACTTCACCATGGAGCTCCGCTTTTTGGCTGCAAACCTCGGGTGCTaGCAGATCTGGGAACAAGGGCTTCCTTGGAAATTCAGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NFTMELRFLAANLGC*QIWEQGLPWKFSGR Trigger: CCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCATGGTGAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS CCA 90 bp | ATGGAGCTCCGCTTTTTGGCTGCAAACCTCGGGTGCTGCCAGATCTaGGAACAAGGGCTTCCTTGGAAATTCAGTGGCAGGTCACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MELRFLAANLGCCQI*EQGLPWKFSGRSLL Trigger: AAGCAGTGACCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | TCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATCCCACATGGCAATGGAGCTCCGCTTTTaGGCTGCAAACCTCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SNKSLLSCPKHGDRSHMAMELRF*AANLGC Trigger: GCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCAT...TGCCATGTGGGATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACTCCATGTCACCACCCTATTGTCCTTCCACCCCAGGCCCTTCAGCAAGGCCTTGCCGTCATCCTaGTCAAGTAGCAGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLLHVTTLLSFHPRPFSKALPSS*SSSRKM Trigger: CATCTTCCTGCTACTTGACAAGGATGACGGCAAGGC...CTTGCTGAAGGGCCTGGGGTGGAAGGACAATAGGGTGGTGACATGGAGTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS GCA 90 bp | AGATCTGGGAACAAGGGCTTCCTTGGAAATTCAGTGGCAGGTCACTaGTTGTCATTGCTGGTACCGGCTCACCTGAGAAGAGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGNKGFLGNSVAGH*LSLLVPAHLRRAAA Trigger: TGCTGCTGCTCTTCTCAGGTGAGCCGGTACCAGCAATGACAAGCAGTGACCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCCCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | GGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACGGTCACTGCTTGTCATaGCTGGTACCGGCTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMGERNGILATSSGVSVNGHCLS*LVPAHL Trigger: CAGGTGAGCCGGTACCAGCAATGACAAGCAGTGACC...GTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCCCAGAAGCCTTGGGTCAAGTCTATCCCCAGAGAACTCCTTACTCCATTCGGTGACATTATGGTaGGCGCTGTCACATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTPRSLGSSLSPENSLLHSVTLW*ALSHFC Trigger: GCAGAAATGTGACAGCGCCAACCATAATGTCACCGA...ATGGAGTAAGGAGTTCTCTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | TTGGGTGATCCTTGGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGGTTCCGCCGCTTCAGTaGGTCCAACGTGCTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LGDPWNGREKWHSGNFFRVPPLQ*VQRAES Trigger: GGATTCAGCACGTTGGACCAACTGAAGCGGCGGAAC...CCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCCAAGGATCACCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | GGAATGGGAGAGAGAAATGGCATTCTGGCAACTTCTTCAGGTGTCAGTGTGAACTCCTCCATCCCAGCCTaGCCGTCATCCTTGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GMGERNGILATSSGVSVNSSIPA*PSSLSS Trigger: ACTTGACAAGGATGACGGCAAGGCTGGGATGGAGGA...GTTCACACTGACACCTGAAGAAGTTGCCAGAATGCCATTTCTCTCTCCCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS CCA 90 bp | TGGATCAAGATAATGCCATCTTTCAGTGTGTTCCGCCGCTTCAGTTaGTCCAACGTGCTGAATCCTAAGACTAGAAGTTCCGTGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WIKIMPSFSVFRRFS*SNVLNPKTRSSVPQ Trigger: CTGTGGCACGGAACTTCTAGTCTTAGGATTCAGCACGTTGGACCAACTGAAGCGGCGGAACACACTGAAAGATGGCATTATCTTGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS CCA 90 bp | ACCACTTTACCTCCCCTGTCCGAAGAGTCACTATGTCTTCATAGGTaGCTGTCTGGTCAATGTTCAAGCCCTCATAGGTGTGATCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TTLPPLSEESLCLHR*LSGQCSSPHRCDLP Trigger: AGGAAGATCACACCTATGAGGGCTTGAACATTGACCAGACAGCCACCTATGAAGACATAGTGACTCTTCGGACAGGGGAGGTAAAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS-3UTR CAA 90 bp | CATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATGGAACAAGGGCTTCCTaGGAAATTCAGTGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLQIPTSLCFPVPNMGTDGTRAS*EIQWQV Trigger: GACCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCC...ATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGCAGATTCCAACAAGTCTCTGCTTTCCTGTCCCAAACATGGGGACAGATTCGGTGACATTATGGTaGGCGCTGTCACATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLQIPTSLCFPVPNMGTDSVTLW*ALSHFC Trigger: GCAGAAATGTGACAGCGCCAACCATAATGTCACCGA...ATCTGTCCCCATGTTTGGGACAGGAAAGCAGAGACTTGTTGGAATCTGCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CCA 72 bp | CGCTTTTTGGCTGCAAACCTCGGGTGCTGCCAGATCTaGGAACAAGGGCTTCCTTGGAAATTCAGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFLAANLGCCQI*EQGLPWKFSGR Trigger: CCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGCCAAAAAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CAA 90 bp | TCTGGGAACAAGGGCTTCCTTGGAAATTCAGTGGCAGGTCACTGCTaGTCATTGCTGGTACCGGCTCACCTGAGAAGAGCAGCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGNKGFLGNSVAGHC*SLLVPAHLRRAAAG Trigger: TCCTGCTGCTGCTCTTCTCAGGTGAGCCGGTACCAGCAATGACAAGCAGTGACCTGCCACTGAATTTCCAAGGAAGCCCTTGTTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS TCA 72 bp | CTGGCTCCCTCGCTTTCGGAACCAGGTCAGTGCACCTaGGTGGTTTGTGTAGCAGTGAAACTTCACCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAPSLSEPGQCT*VVCVAVKLHHG Trigger: TCCATGGTGAAGTTTCACTGCTACACAAACCACTCAGGTGCACTGACCTGGTTCCGAAAGCGAGGGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS GCA 72 bp | ATGGAGCTCCGCTTTTTGGCTGCAAACCTCGGGTGCTaGCAGATCTGGGAACAAGGGCTTCCTTGGAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: MELRFLAANLGC*QIWEQGLPWKF Trigger: GAATTTCCAAGGAAGCCCTTGTTCCCAGATCTGGCAGCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS GCA 72 bp | AGCCCTCATAGGTGTGATCTTCCTCCATCCCAGCCTTaGCGTCATCCTTGTCAAGTAGCAGGAAGATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPHRCDLPPSQP*RHPCQVAGRWA Trigger: TGCCCATCTTCCTGCTACTTGACAAGGATGACGGCAAGGCTGGGATGGAGGAAGATCACACCTATGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CCA 72 bp | CACCTGAGTGGTTTGTGTAGCAGTGAAACTTCACCATaGAGCTCCGCTTTTTGGCTGCAAACCTCGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSGLCSSETSP*SSAFWLQTSGA Trigger: AGCACCCGAGGTTTGCAGCCAAAAAGCGGAGCTCCATGGTGAAGTTTCACTGCTACACAAACCACTCAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CAA 90 bp | AACAAGGGCTTCCTTGGAAATTCAGTGGCAGGTCACTGCTTGTCATaGCTGGTACCGGCTCACCTGAGAAGAGCAGCAGCAGGAACAACA | + |
|
Preference number: 6 (lower is better) Translates to: NKGFLGNSVAGHCLS*LVPAHLRRAAAGTT Trigger: TGTTGTTCCTGCTGCTGCTCTTCTCAGGTGAGCCGGTACCAGCAATGACAAGCAGTGACCTGCCACTGAATTTCCAAGGAAGCCCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CCA 72 bp | CCTCCCCTGTCCGAAGAGTCACTATGTCTTCATAGGTaGCTGTCTGGTCAATGTTCAAGCCCTCATAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPLSEESLCLHR*LSGQCSSPHRC Trigger: ACACCTATGAGGGCTTGAACATTGACCAGACAGCCACCTATGAAGACATAGTGACTCTTCGGACAGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CCA 72 bp | ATAATGCCATCTTTCAGTGTGTTCCGCCGCTTCAGTTaGTCCAACGTGCTGAATCCTAAGACTAGAAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IMPSFSVFRRFS*SNVLNPKTRSS Trigger: GGAACTTCTAGTCTTAGGATTCAGCACGTTGGACCAACTGAAGCGGCGGAACACACTGAAAGATGGCATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
||
| CDS CAA 72 bp | GCAGAAGTAGATACCATTATCCTCGTACTGGATGTTTaGGATAGTGAGGGTGTAGACAGAGCCATTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: AEVDTIILVLDV*DSEGVDRAILG Trigger: ACCCAGAATGGCTCTGTCTACACCCTCACTATCCAAAACATCCAGTACGAGGATAATGGTATCTACTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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| CDS CAA 90 bp | TTTCTGCTTGCAGAAGTAGATACCATTATCCTCGTACTGGATGTTTaGGATAGTGAGGGTGTAGACAGAGCCATTCTGGGTCTGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: FLLAEVDTIILVLDV*DSEGVDRAILGLHN Trigger: ATTGTGCAGACCCAGAATGGCTCTGTCTACACCCTCACTATCCAAAACATCCAGTACGAGGATAATGGTATCTACTTCTGCAAGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044228.11 ENSMUST00000167143.2 |
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