RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD79A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003379

Ensembl transcript IDs: ENSMUST00000003469.8

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGCTGGACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTaGGGCAGCCTGGAGGCAAGGGTAGGCCACTCGAGTGGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: GSWTWGRTRLGGRIG*GSLEARVGHSSGWS
Trigger: GCTCCAGCCACTCGAGTGGCCTACCCTTGCCTCCAGGCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGTCCAGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR-3UTR GCA 90 bp ATAGGGTGGGGCAGCCTGGAGGCAAGGGTAGGCCACTCGAGTGGCTGGAGCAAGGTGGGGAGGCAGGGATaGTGGAGTCAGACATATGGC +
Preference number: 2 (lower is better)
Translates to: IGWGSLEARVGHSSGWSKVGRQG*WSQTYG
Trigger: GCCATATGTCTGACTCCAGCATCCCTGCCTCCCCAC...CTTGCTCCAGCCACTCGAGTGGCCTACCCTTGCCTCCAGGCTGCCCCACCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR-3UTR CCA 90 bp ACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCCTGGAGGCAGGTAGGCCACTCGAGTaGCTGGAGCAAGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: TWGRTRLGGRIGWGSLEAGRPLE*LEQALG
Trigger: TCCCAGTGCTTGCTCCAGCCACTCGAGTGGCCTACC...TGCCTCCAGGCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR-3UTR CCA 90 bp CAGCGATTAAGGGCTCATTACCCACTAGAGAGGGAGCTGGACTTGGGGAAGGACGGTGGGAGAATAGGGTaGGGCAGCCTGGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: QRLRAHYPLERELDLGKDGGRIG*GSLEAR
Trigger: CCTTGCCTCCAGGCTGCCCCACCCTATTCTCCCACC...GTCCTTCCCCAAGTCCAGCTCCCTCTCTAGTGGGTAATGAGCCCTTAATCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR-3UTR CCA 90 bp CAGAGTTTAAATATAGGTAAAAATTTGGTAACACCCGGGCTGGTTCCCCCTTGCACTCCAGGGGAAGAGTaGGGAGGCAGGGATGCTGGA +
Preference number: 2 (lower is better)
Translates to: QSLNIGKNLVTPGLVPPCTPGEE*GGRDAG
Trigger: TCCAGCATCCCTGCCTCCCCACTCTTCCCCTGGAGT...GCAAGGGGGAACCAGCCCGGGTGTTACCAAATTTTTACCTATATTTAAACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR CCA 72 bp AAATTTGGTAACACCCGGGCTGGTTCCCCCTTGCTTTaGGACATGAGGAGGGTGAGGCCCTATAAGGGAGAT +
Preference number: 3 (lower is better)
Translates to: KFGNTRAGSPLL*DMRRVRPYKGD
Trigger: ATCTCCCTTATAGGGCCTCACCCTCCTCATGTCCCAAAGCAAGGGGGAACCAGCCCGGGTGTTACCAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR TCA 72 bp AGAACTGTCTGGTCCCAGATCTCAGAAGTGGTCAGGTaGGAACTTGAACCTAGAATCCTGGGTCTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: RTVWSQISEVVR*ELEPRILGLRG
Trigger: CCCCCTCAGACCCAGGATTCTAGGTTCAAGTTCTCACCTGACCACTTCTGAGATCTGGGACCAGACAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
3UTR CCA 72 bp AGACAGCAAGAACTGTCTGGTCCCAGATCTCAGAAGTaGTCAGGTGAGAACTTGAACCTAGAATCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: RQQELSGPRSQK*SGENLNLESWV
Trigger: GACCCAGGATTCTAGGTTCAAGTTCTCACCTGACCACTTCTGAGATCTGGGACCAGACAGTTCTTGCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR TCA 90 bp GGGAGCTGGACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCGGAGAGGCAGGGCTCTaGGGGCTTCTAGACCCCCTG +
Preference number: 4 (lower is better)
Translates to: GSWTWGRTRLGGRIGWGSGEAGL*GLLDPL
Trigger: CAGGGGGTCTAGAAGCCCTCAGAGCCCTGCCTCTCC...GCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGTCCAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CCA 90 bp GGCAGGGATGCTGGAGTCAGACATATGGCAGGCAGGGAAGGGTGGGACATGTCATGGCCTGTGGTACCCTaGCCAGGACCCAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GRDAGVRHMAGREGWDMSWPVVP*PGPSGT
Trigger: AGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCA...TGACATGTCCCACCCTTCCCTGCCTGCCATATGTCTGACTCCAGCATCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR GCA 90 bp GGGAGCTGGACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCCGTCCCTGGCACCACTaGACAGAACAGCAAGATGAT +
Preference number: 4 (lower is better)
Translates to: GSWTWGRTRLGGRIGWGSRPWHH*TEQQDD
Trigger: ATCATCTTGCTGTTCTGTGCAGTGGTGCCAGGGACG...GCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGTCCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CCA 90 bp CAGCGATTAAGGGCTCATTACCCACTAGAGAGGGAGCTGGACTTGGGGAAGGACTGGGCATCTCCAATGTaGAGGTTGCCCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: QRLRAHYPLERELDLGKDWASPM*RLPTSW
Trigger: CCAGGATGTGGGCAACCTCCACATTGGAGATGCCCA...GTCCTTCCCCAAGTCCAGCTCCCTCTCTAGTGGGTAATGAGCCCTTAATCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CCA 90 bp GAGCTGGACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCCTCAGTACAAGCCCCTGTaGTTCTTGTTTACTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ELDLGKDKIRWENRVGQPQYKPL*FLFTSG
Trigger: CCCCGAAGTAAACAAGAACCACAGGGGCTTGTACTG...AGGCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGTCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR GCA 90 bp ATTAAGGGCTCATTACCCACTAGAGAGGGAGCTGGACTTGGGGAAGGACAAGATCTCCAATGTGGAGGTTaGCCACATCCTGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: IKGSLPTREGAGLGEGQDLQCGG*PHPGRC
Trigger: GCACCTACCAGGATGTGGGCAACCTCCACATTGGAG...ATCTTGTCCTTCCCCAAGTCCAGCTCCCTCTCTAGTGGGTAATGAGCCCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR GCA 90 bp GAGCTGGACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCCTCCAAACTTCTCATTTTaGCACCGTTTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: ELDLGKDKIRWENRVGQPPNFSF*HRFLNS
Trigger: GCTATTCAGGAAACGGTGGCAAAATGAGAAGTTTGG...AGGCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGTCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CCA 90 bp CAGAGTTTAAATATAGGTAAAAATTTGGTAACACCCGGGCTGGTTCCCCCTTGCTCGGGGAAGAACAGCTaGCCTGTGGTACCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QSLNIGKNLVTPGLVPPCSGKNS*PVVPWP
Trigger: TGGCCAGGGTACCACAGGCCAGCTGTTCTTCCCCGA...GCAAGGGGGAACCAGCCCGGGTGTTACCAAATTTTTACCTATATTTAAACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 90 bp AAGTTCACCGTCAGGGATGGTGGACCCCCTTCTACCCGCAGGGCCTaGCATCCGGGACCCAAACAGGCGTATGACAAGAAGAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: KFTVRDGGPPSTRRA*HPGPKQAYDKKRRR
Trigger: TCTCCTCCTCTTCTTGTCATACGCCTGTTTGGGTCCCGGATGCCAGGCCCTGCGGGTAGAAGGGGGTCCACCATCCCTGACGGTGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 90 bp TTCGGGGAAGAACAGCTGGCCTGTGGTACCCTGGCCAGGACCCAGTaGCACTGGGGGCCATGTGATGTTAGACTGAAGGCTGAACCACCA +
Preference number: 5 (lower is better)
Translates to: FGEEQLACGTLARTQ*HWGPCDVRLKAEPP
Trigger: TGGTGGTTCAGCCTTCAGTCTAACATCACATGGCCCCCAGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAGCTGTTCTTCCCCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 90 bp GAAGAACAGCTGGCCTGTGGTACCCTGGCCAGGACCCAGTGGCACTaGGGGCCATGTGATGTTAGACTGAAGGCTGAACCACCATGTGAT +
Preference number: 5 (lower is better)
Translates to: EEQLACGTLARTQWH*GPCDVRLKAEPPCD
Trigger: ATCACATGGTGGTTCAGCCTTCAGTCTAACATCACATGGCCCCCAGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAGCTGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS GCA 90 bp CAGCGTCCCTGGCACCACTGCACAGAACAGCAAGATGATCCCTTCTaGTGTGATGATGCGGTTCTTGGTACCTTCCCCCATGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: QRPWHHCTEQQDDPF*CDDAVLGTFPHVQE
Trigger: TTCCTGGACATGGGGGAAGGTACCAAGAACCGCATCATCACAGCAGAAGGGATCATCTTGCTGTTCTGTGCAGTGGTGCCAGGGACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS TCA 90 bp CATCTGGCATGTCCACCCCAAACTTCTCATTTTGCCACCGTTTCCTaGATAGCAGCAGCGTCCCTGGCACCACTGCACAGAACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HLACPPQTSHFATVS*IAAASLAPLHRTAR
Trigger: TCTTGCTGTTCTGTGCAGTGGTGCCAGGGACGCTGCTGCTATTCAGGAAACGGTGGCAAAATGAGAAGTTTGGGGTGGACATGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CAA 90 bp ACTTGGGGAAGGACAAGATTAGGTGGGAGAATAGGGTGGGGCAGCCTGGAGGCAGTTGTTTTCTATCACTaGGCACCAGTACAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: TWGRTRLGGRIGWGSLEAVVFYH*APVQAP
Trigger: AGGGGCTTGTACTGGTGCCAAGTGATAGAAAACAAC...TGCCTCCAGGCTGCCCCACCCTATTCTCCCACCTAATCTTGTCCTTCCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CAA 90 bp ATTAAGGGCTCATTACCCACTAGAGAGGGAGCTGGACTTGGGGAAGGACAAGATGTGATGATGCGGTTCTaGGTACCTTCCCCCATGTCC +
Preference number: 5 (lower is better)
Translates to: IKGSLPTREGAGLGEGQDVMMRF*VPSPMS
Trigger: GGACATGGGGGAAGGTACCAAGAACCGCATCATCAC...ATCTTGTCCTTCCCCAAGTCCAGCTCCCTCTCTAGTGGGTAATGAGCCCTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CAA 90 bp CAGAGTTTAAATATAGGTAAAAATTTGGTAACACCCGGGCTGGTTCCCCCTTGCAAGCCCCTGTGGTTCTaGTTTACTTCGGGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: QSLNIGKNLVTPGLVPPCKPLWF*FTSGKN
Trigger: GTTCTTCCCCGAAGTAAACAAGAACCACAGGGGCTT...GCAAGGGGGAACCAGCCCGGGTGTTACCAAATTTTTACCTATATTTAAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS-3UTR CAA 90 bp CAGAGTTTAAATATAGGTAAAAATTTGGTAACACCCGGGCTGGTTCCCCCTTGCGAGCGTTTTAATATGTaGTTTTCTATCACTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QSLNIGKNLVTPGLVPPCERFNM*FSITWH
Trigger: GTGCCAAGTGATAGAAAACAACATATTAAAACGCTC...GCAAGGGGGAACCAGCCCGGGTGTTACCAAATTTTTACCTATATTTAAACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 72 bp GGTACCTTCCCCCATGTCCAGGAAGGGCCTAGGGACTaGATTGCGCACGCGGAGGTAAGTACCACAGGAGCG +
Preference number: 6 (lower is better)
Translates to: GTFPHVQEGPRD*IAHAEVSTTGA
Trigger: CGCTCCTGTGGTACTTACCTCCGCGTGCGCAATCCAGTCCCTAGGCCCTTCCTGGACATGGGGGAAGGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 72 bp CTGGCCTGTGGTACCCTGGCCAGGACCCAGTGGCACTaGGGGCCATGTGATGTTAGACTGAAGGCTGAACCA +
Preference number: 6 (lower is better)
Translates to: LACGTLARTQWH*GPCDVRLKAEP
Trigger: TGGTTCAGCCTTCAGTCTAACATCACATGGCCCCCAGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 72 bp GAACAGCTGGCCTGTGGTACCCTGGCCAGGACCCAGTaGCACTGGGGGCCATGTGATGTTAGACTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: EQLACGTLARTQ*HWGPCDVRLKA
Trigger: AGCCTTCAGTCTAACATCACATGGCCCCCAGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAGCTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 72 bp TTTACTTCGGGGAAGAACAGCTGGCCTGTGGTACCCTaGCCAGGACCCAGTGGCACTGGGGGCCATGTGATG +
Preference number: 6 (lower is better)
Translates to: FTSGKNSWPVVP*PGPSGTGGHVM
Trigger: CATCACATGGCCCCCAGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAGCTGTTCTTCCCCGAAGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CCA 72 bp CCCCTGTGGTTCTTGTTTACTTCGGGGAAGAACAGCTaGCCTGTGGTACCCTGGCCAGGACCCAGTGGCACT +
Preference number: 6 (lower is better)
Translates to: PLWFLFTSGKNS*PVVPWPGPSGT
Trigger: AGTGCCACTGGGTCCTGGCCAGGGTACCACAGGCCAGCTGTTCTTCCCCGAAGTAAACAAGAACCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS TCA 72 bp GGACCCAGTGGCACTGGGGGCCATGTGATGTTAGACTaGAGGCTGAACCACCATGTGATATTAGGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: GPSGTGGHVMLD*RLNHHVILGFL
Trigger: CAGGAACCCTAATATCACATGGTGGTTCAGCCTTCAGTCTAACATCACATGGCCCCCAGTGCCACTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS TCA 72 bp TGTCCACCCCAAACTTCTCATTTTGCCACCGTTTCCTaGATAGCAGCAGCGTCCCTGGCACCACTGCACAGA +
Preference number: 6 (lower is better)
Translates to: CPPQTSHFATVS*IAAASLAPLHR
Trigger: TCTGTGCAGTGGTGCCAGGGACGCTGCTGCTATTCAGGAAACGGTGGCAAAATGAGAAGTTTGGGGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS GCA 72 bp TGGCACCACTGCACAGAACAGCAAGATGATCCCTTCTaGTGTGATGATGCGGTTCTTGGTACCTTCCCCCAT +
Preference number: 6 (lower is better)
Translates to: WHHCTEQQDDPF*CDDAVLGTFPH
Trigger: ATGGGGGAAGGTACCAAGAACCGCATCATCACAGCAGAAGGGATCATCTTGCTGTTCTGTGCAGTGGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8
CDS CAA 72 bp TCTATCACTTGGCACCAGTACAAGCCCCTGTGGTTCTaGTTTACTTCGGGGAAGAACAGCTGGCCTGTGGTA +
Preference number: 6 (lower is better)
Translates to: SITWHQYKPLWF*FTSGKNSWPVV
Trigger: TACCACAGGCCAGCTGTTCTTCCCCGAAGTAAACAAGAACCACAGGGGCTTGTACTGGTGCCAAGTGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003469.8