Pregenerated sensors for CD72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028459Ensembl transcript IDs: ENSMUST00000030179.11, ENSMUST00000098104.10, ENSMUST00000098105.4, ENSMUST00000107925.8, ENSMUST00000107926.8
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCGACGGATGGAGACTGCACTGCCAGGTCCTGGCCCTTCCCCCATaGGCCCGACTGAGGAGAGGATGGACTGCGAGGGCAGCAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PDGWRLHCQVLALPP*ARLRRGWTARAAAL Trigger: CAGGGCTGCTGCCCTCGCAGTCCATCCTCTCCTCAGTCGGGCCCATGGGGGAAGGGCCAGGACCTGGCAGTGCAGTCTCCATCCGTCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | CCTGCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTaGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PAVVVNSPQGWAREP*NRAQHSLPRAAALE Trigger: CTCCAGGGCTGCTGCCCGGGGAAGGCTATGCTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAATTCACCACCACAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR TCA 90 bp | CCCCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTTGAACTGTaGGGCGGGCAGTCTTCTCTGCCACCGAGGGCATCATGCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: PPPYPSCCPLPQLEL*GGQSSLPPRASCQA Trigger: GGCTTGGCATGATGCCCTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR TCA 90 bp | CCATGTGCCCCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTTaGACTGTGAGGCGGGCAGTCTTCTCTGCCACCGAGGGCATCATG | + |
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Preference number: 1 (lower is better) Translates to: PCAPALPQLLPATAT*TVRRAVFSATEGIM Trigger: CATGATGCCCTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGGGCACATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | CCGAGGGCATCATGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTaGGGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: PRASCQATHTQPAAA*GTLLAVRPVSSGFQ Trigger: TTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGCCCCAGGCAGCTGCAGGCTGGGTGTGGGTGGCTTGGCATGATGCCCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR GCA 90 bp | GTTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCTaGCACCGAGGGCATCATGCCAAGCCACCCACACCCAGCCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VARYRNLNCEAGSLL*HRGHHAKPPTPSLQ Trigger: CTGCAGGCTGGGTGTGGGTGGCTTGGCATGATGCCCTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | CCTTCTCACTGCGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTaGACACACCCTGCAAGCCGGCCACTCCACTGCCCCTGGTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: PSHCGKTSGVARSSC*THPASRPLHCPWFH Trigger: GTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR GCA 90 bp | CCTGGCTGCTGCCTTGGCCCGTTCAGCTTTGGCTTTCTATCCATGTaGCCCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: PGCCLGPFSFGFLSM*PRPTPAVARYRNLN Trigger: GTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGGGCACATGGATAGAAAGCCAAAGCTGAACGGGCCAAGGCAGCAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR GCA 90 bp | CGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGACACACCCTaGAAGCCGGCCACTCCACTGCCCCTGGTTCCACCATCACCACTT | + |
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Preference number: 1 (lower is better) Translates to: REDLRGGKIKLLDTP*KPATPLPLVPPSPL Trigger: AAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | TCTAACACGAGTCAACCCCTTCTCACTGCGGGAAGACCTCAGGGGTaGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCC | + |
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Preference number: 1 (lower is better) Translates to: SNTSQPLLTAGRPQG*QDQAAGHTLQAGHS Trigger: GGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGGTTGACTCGTGTTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | GCCTCAGCATGGTCTCAATGGACAGAGCACCTCCTAGCCGACCCCTaGGTTCACTGTCCCATTGGGATCACCGAACTAGACACAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: ASAWSQWTEHLLADP*VHCPIGITELDTAL Trigger: CAATGCTGTGTCTAGTTCGGTGATCCCAATGGGACAGTGAACCCAGGGGTCGGCTAGGAGGTGCTCTGTCCATTGAGACCATGCTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | GGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTaGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAAT | + |
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Preference number: 1 (lower is better) Translates to: GTLLAVRPVSSGFQP*PSGYPVRTVHLLDN Trigger: ATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR GCA 90 bp | AGAGCCCCTGTAGGACTTCCTTTCTTAAGCTCTTGTCCCACCACCTaGCTGGAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: RAPVGLPFLSSCPTT*LEIQGLSLEQMLGT Trigger: TGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGGGACAAGAGCTTAAGAAAGGAAGTCCTACAGGGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR TCA 90 bp | TTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGCCCGAGAGTaGGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: FKQAAGHPLAGHARE*GSAGGIAVLKIGRP Trigger: CGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR CCA 90 bp | GCCACTGACAACTTCATCAGTACTTGTTCCTCAGCCTCGCAGCCCTaGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ATDNFISTCSSASQP*SPRSGPPLNNNPPA Trigger: AGCAGGGGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGAGGAACAAGTACTGATGAAGTTGTCAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTaGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LFWRLLYSSQEKSSF*SSFQASSRSSLSWA Trigger: TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR CAA 90 bp | TCCATGTGCCCCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTaGAACTGTGAGGCGGGCAGTCTTCTCTGCCACCGAGGGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: SMCPRPTPAVARYRN*NCEAGSLLCHRGHH Trigger: ATGATGCCCTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGGGCACATGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGCAAGCCGGCCACTCCACTGCCCCTGGTTCCACCATCACCACTTACCTCCCCGCTACCGCAACTTaGACTGTGAGGCGGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: TLQAGHSTAPGSTITTYLPATAT*TVRRAV Trigger: GACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGG...GAGGTAAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTCTCCCGAAGCCCGAGAGTGAGGGAGTaGTGGAGGAATAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RGGPSATLPRPDPRLSRSPRVRE*WRNSSL Trigger: AAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGG...GCTTCGGGAGAGCCGGGGGTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR GCA 90 bp | CCACCACCTGCCTGGAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGGGATGGAGACTGCACTaGCAGGTCCTGGCCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PPPAWRFRASAWSRCWEQGWRLH*QVLALP Trigger: GGGAAGGGCCAGGACCTGGCAGTGCAGTCTCCATCC...CTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGCAAGCCGGCCACTCCACTGCCCCTGGTTCCACCATCACCACTTACCTCCCACTCCAGACATCCTaGTCCAGCCTGAGACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLQAGHSTAPGSTITTYLPLQTS*SSLRPL Trigger: CAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGG...GAGGTAAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCACCTGCCTGGAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGCCGCAACTTGAACTGTaGGGCGGGCAGTCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPPAWRFRASAWSRCWEQPQLEL*GGQSSL Trigger: CAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGG...CTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTGTAGGACTTCCTTTCTTAAGCTCTTGTCCCACCACCTGCCTGGAGATTCATCCTGGTCCAGCCTaGGACCCCTGTCCGCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: APVGLPFLSSCPTTCLEIHPGPA*DPCPPL Trigger: CAGCGGCGGACAGGGGTCTCAGGCTGGACCAGGATG...AATCTCCAGGCAGGTGGTGGGACAAGAGCTTAAGAAAGGAAGTCCTACAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGTCCCACCACCTGCCTGGAGATTCAGGGCCTCAGCTTGGAGCAGATGCTAGCTTCCCCGACGGATaGAGACTGCACTGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLSHHLPGDSGPQLGADASFPDG*RLHCQV Trigger: GACCTGGCAGTGCAGTCTCCATCCGTCGGGGAAGCT...AGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGGGACAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | GAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGTGATGAGACCTCTCCGGAGCGCCCTCCCCTaGCCCATCTCTAGTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EIQGLSLEQMLGTVMRPLRSALP*PISSLG Trigger: TCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCG...GAGAGGTCTCATCACTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGGGGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGATAAAACTGCCTGGCTaGCTCCGGGCCATCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: CLGHALSSEACELRLPTLIKLPG*LRAIHP Trigger: TGGATGGATGGCCCGGAGCCAGCCAGGCAGTTTTAT...CAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGCCCCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTCGCAGCCCTGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCCTCCTAGCCGACCCCTaGGTTCACTGTCCCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: SASQPWSPRSGPPLNNNPLLADP*VHCPIG Trigger: CCCAATGGGACAGTGAACCCAGGGGTCGGCTAGGAG...GGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCCGACTGAGGAGAGGATaGACTGCGAGGGCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TSLSTGSVPRGGPSATLPRLRRG*TARAAA Trigger: GGCTGCTGCCCTCGCAGTCCATCCTCTCCTCAGTCG...GGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCTGTAGAAAGAGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CAA 90 bp | GGGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTaGGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: GHALSSEACELRLPT*AFGIPCKDSALAGQ Trigger: TTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCTCACTGCGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGACACTCTGGCTGTGGCCACTaGCAACTTCATCAGTACTTG | + |
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Preference number: 2 (lower is better) Translates to: PLLTAGRPQGWQDQAAGHSGCGH*QLHQYL Trigger: CAAGTACTGATGAAGTTGTCAGTGGCCACAGCCAGA...GTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGCCGAGAGTGAGGGAGTaGTGGAGGAATAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKPRVRE*WRNSSL Trigger: AAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGG...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGTGATGAGACCTCTCTTCAATAAAACTGCCTaGCTGGCTCCGGGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: EIQGLSLEQMLGTVMRPLFNKTA*LAPGHP Trigger: TGGATGGCCCGGAGCCAGCCAGGCAGTTTTATTGAA...GAGAGGTCTCATCACTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAGGACTTCCTTTCTTAAGCTCTTGTCCCACCACCTGCCTGGAGATTCAGGCAAGATCAAGCTGCTaGACACACCCTGCAAGCCGG | + |
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Preference number: 2 (lower is better) Translates to: PVGLPFLSSCPTTCLEIQARSSC*THPASR Trigger: CCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGC...CTGAATCTCCAGGCAGGTGGTGGGACAAGAGCTTAAGAAAGGAAGTCCTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR CAA 90 bp | TTAAGCTCTTGTCCCACCACCTGCCTGGAGATTCAGGGCCTCAGCTaGGAGCAGATGCTGGGAACAGTGATGAGACCTCTCTTTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LSSCPTTCLEIQGLS*EQMLGTVMRPLFLQ Trigger: CTGTAGAAAGAGAGGTCTCATCACTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGGGACAAGAGCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAGGGCATGCCCGAGAGTaGGGGAGTGCTGGAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LEASLLFPREVQFLEQLSGHARE*GSAGGI Trigger: TATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCC...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCGGGCATGCCCGAGAGTaGGGGAGTGCTGGAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSGHARE*GSAGGI Trigger: TATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCC...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGGGGCATGCCCGAGAGTaGGGGAGTGCTGGAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKGHARE*GSAGGI Trigger: TATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCC...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGGAGAAGTCCAGTTTCTaGAGCAGCTTTCAAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKEKSSF*SSFQAS Trigger: GCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCTGGGAACAGTGATGAGACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAAATTCCCCACAAGGGTaGGCTAGGGAGCCCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: DAGNSDETSLSTGSVPRGNSPQG*AREPWN Trigger: GTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAATT...TCCTCTTGGAACAGACCCTGTAGAAAGAGAGGTCTCATCACTGTTCCCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCCCGAGAGTGAGGGAGTaGTGGAGGAATAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: EKSSFWSSFQASSRSSLSPRVRE*WRNSSL Trigger: AAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGG...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCTGGGAACAGTGATGAGACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAAGGGGAGCCTCAGCATaGTCTCAATGGACAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DAGNSDETSLSTGSVPRGRGASA*SQWTEH Trigger: GTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCT...TCCTCTTGGAACAGACCCTGTAGAAAGAGAGGTCTCATCACTGTTCCCAGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGGGCATGCCCGAGAGTaGGGGAGTGCTGGAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPGHARE*GSAGGI Trigger: TATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCC...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCCCGAGAGTGAGGGAGTaGTGGAGGAATAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSPRVRE*WRNSSL Trigger: AAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGG...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| 3UTR CAA 90 bp | CCCTGGGTTCACTGTCCCATTGGGATCACCGAACTAGACACAGCATaGCTGACACACAGGACTAACACGTGCAAAGTATTTAAAAATATT | + |
|
Preference number: 2 (lower is better) Translates to: PWVHCPIGITELDTA*LTHRTNTCKVFKNI Trigger: AATATTTTTAAATACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCCCAATGGGACAGTGAACCCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | TGGAGACTGCACTGCCAGGTCCTGGCCCTTCCCCCATaGGCCCGACTGAGGAGAGGATGGACTGCGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WRLHCQVLALPP*ARLRRGWTARA Trigger: TGCCCTCGCAGTCCATCCTCTCCTCAGTCGGGCCCATGGGGGAAGGGCCAGGACCTGGCAGTGCAGTCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR TCA 72 bp | CCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTTaGACTGTGAGGCGGGCAGTCTTCTCTGCCACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: PALPQLLPATAT*TVRRAVFSATE Trigger: CTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR TCA 72 bp | CCCTGTCCGCCGCTGTCGCTCACTACCTTCATCCCCTaGGCTTCCCCGACGGATGGAGACTGCACTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PCPPLSLTTFIP*ASPTDGDCTAR Trigger: CCTGGCAGTGCAGTCTCCATCCGTCGGGGAAGCTCAGGGGATGAAGGTAGTGAGCGACAGCGGCGGACAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR GCA 72 bp | GGCATCATGCCAAGCCACCCACACCCAGCCTGCAGCTaGCTGGGGCACGCTCTTAGCAGTGAGGCCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GIMPSHPHPACS*LGHALSSEACE Trigger: CTCACAGGCCTCACTGCTAAGAGCGTGCCCCAGGCAGCTGCAGGCTGGGTGTGGGTGGCTTGGCATGATGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | GTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTaGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVNSPQGWAREP*NRAQHSLPRAA Trigger: TGCTGCCCGGGGAAGGCTATGCTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAATTCACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR GCA 72 bp | TGCCTTGGCCCGTTCAGCTTTGGCTTTCTATCCATGTaGCCCCGCCCTACCCCAGCTGTTGCCCGCTACCGC | + |
|
Preference number: 3 (lower is better) Translates to: CLGPFSFGFLSM*PRPTPAVARYR Trigger: GCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGGGCACATGGATAGAAAGCCAAAGCTGAACGGGCCAAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | TCATGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTaGGGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SCQATHTQPAAA*GTLLAVRPVSS Trigger: TGAGCTCACAGGCCTCACTGCTAAGAGCGTGCCCCAGGCAGCTGCAGGCTGGGTGTGGGTGGCTTGGCATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR TCA 72 bp | GCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTaGGACCCCTGTCCGCCGCTGTCGCTCACTACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALSDHSRHPGPA*DPCPPLSLTTF Trigger: GAAGGTAGTGAGCGACAGCGGCGGACAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR GCA 72 bp | AGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTaGCCCTGGTTCCACCATCACCACTTACCTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SCWTHPASRPLH*PWFHHHHLPLP Trigger: GGGTAGAGGTAAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR GCA 72 bp | TCTTTCTACAGGGTCTGTTCCAAGAGGAGGTCCCTCTaGCACACTTCCCAGGCCAGACCCCCGGCTCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SFYRVCSKRRSL*HTSQARPPALP Trigger: CGGGAGAGCCGGGGGTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCTGTAGAAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCTCGCAGCCCTGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCGCCCTGGCTGCTGCCTaGGCCCGTTCAGCTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SASQPWSPRSGPPLNNNPALAAA*ARSALA Trigger: AGCCAAAGCTGAACGGGCCAAGGCAGCAGCCAGGGC...GGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR TCA 72 bp | TACCCCAGCTGTTGCCCGCTACCGCAACTTGAACTGTaGGGCGGGCAGTCTTCTCTGCCACCGAGGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: YPSCCPLPQLEL*GGQSSLPPRAS Trigger: TGATGCCCTCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | AGTCAACCCCTTCTCACTGCGGGAAGACCTCAGGGGTaGCAAGATCAAGCTGCTGGACACACCCTGCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQPLLTAGRPQG*QDQAAGHTLQA Trigger: GGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGGTTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGTCCCACCACCTGCCTGGAGATTCAGGGCCTCAGCTTGGAGCAGATGCTCAACTTCATCAGTACTaGTTCCTCAGCCTCGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSHHLPGDSGPQLGADAQLHQY*FLSLAA Trigger: GGCTGCGAGGCTGAGGAACAAGTACTGATGAAGTTG...AGCATCTGCTCCAAGCTGAGGCCCTGAATCTCCAGGCAGGTGGTGGGACAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | GCACCTCCTAGCCGACCCCTGGGTTCACTGTCCCATTaGGATCACCGAACTAGACACAGCATTGCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: APPSRPLGSLSH*DHRTRHSIADT Trigger: TGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCCCAATGGGACAGTGAACCCAGGGGTCGGCTAGGAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | TGGTCTCAATGGACAGAGCACCTCCTAGCCGACCCCTaGGTTCACTGTCCCATTGGGATCACCGAACTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: WSQWTEHLLADP*VHCPIGITELD Trigger: GTCTAGTTCGGTGATCCCAATGGGACAGTGAACCCAGGGGTCGGCTAGGAGGTGCTCTGTCCATTGAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR GCA 72 bp | TTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATaGCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FQASSRSSLSWA*PRVRECWRNSS Trigger: ACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| 3UTR CCA 72 bp | TTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTaGCCTTCGGGATACCCTGTAAGGACAGTGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LAVRPVSSGFQP*PSGYPVRTVHL Trigger: CAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | CTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTaGGAAGTTCTTAAGGAAGGTCAAGTCTTTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSGAPSPDPSLV*EVLKEGQVFSG Trigger: TCCAGAAAAGACTTGACCTTCCTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| 3UTR CCA 72 bp | AACTTCATCAGTACTTGTTCCTCAGCCTCGCAGCCCTaGTCTCCTAGATCAGGACCTCCCCTCAACAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: NFISTCSSASQP*SPRSGPPLNNN Trigger: ATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGAGGAACAAGTACTGATGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CCA 72 bp | AGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTaGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RLLYSSQEKSSF*SSFQASSRSSL Trigger: AAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGGACAGCCTGGTGGCCCTCCTaGGACTGGAGACACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PWNRAQHSLPRAAALERTAWWPS*DWRHLH Trigger: GTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGC...TGTCCGCTCCAGGGCTGCTGCCCGGGGAAGGCTATGCTGTGCCCGGTTCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGGACAGGAAGCCAAGCCTGGTaGCCCTCCTGGGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWNRAQHSLPRAAALERTGSQAW*PSWDWR Trigger: TCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCC...TGTCCGCTCCAGGGCTGCTGCCCGGGGAAGGCTATGCTGTGCCCGGTTCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| 3UTR CAA 72 bp | CCCCGCCCTACCCCAGCTGTTGCCCGCTACCGCAACTaGAACTGTGAGGCGGGCAGTCTTCTCTGCCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPTPAVARYRN*NCEAGSLLCHR Trigger: TCGGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGTAGGGCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCAGGGGAAGCCAAGCCTaGTGGCCCTCCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPLVTTPDILVQPETPVRGSQA*WPSWDW Trigger: CCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCT...GACAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGCAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCCGCTGGCTTCCCAAATCCTaGTCCCCTCCTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLVTTPDILVQPETPVRWLPKS*SPPGTA Trigger: GGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCA...GCGGACAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTTCTCCCTGAGCTGCTaGTGCAGGCTGCTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGVARSSCWTHPASRPLHFSLSC*CRLLLV Trigger: CACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAA...GTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGGGAAGCCAAGCCTGGTaGCCCTCCTGGGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKGSQAW*PSWDWR Trigger: TCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCC...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCTCACTGCGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGACACTGGCCCTCCTGGGACTaGAGACACTTGCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLTAGRPQGWQDQAAGHWPSWD*RHLHIL Trigger: GAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCA...GTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCAAGGGGAAGCCAAGCCTaGTGGCCCTCCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWARGSQA*WPSWDW Trigger: CCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCT...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGGAAGCCAAGCCTGGTaGCCCTCCTGGGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHGSQAW*PSWDWR Trigger: TCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCC...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGAGGGGAAGCCAAGCCTaGTGGCCCTCCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWRGSQA*WPSWDW Trigger: CCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCT...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCCCTGCTGTGGTGGTGGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPRSGPPLNNNPPAVVVVLVNL*SRSLLR Trigger: GCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCAC...CACCACCACAGCAGGGGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGACTTATCTTCTCCCTaGGCTGCTGCTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLPTLAFGIPCKDSALADLSSP*AAAAGC Trigger: GCAGCCTGCAGCAGCAGCTCAGGGAGAAGATAAGTC...AGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTCGCAGCCCTGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCTCCTTCTGCCCCAGCTaGCTTATCTTCTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SASQPWSPRSGPPLNNNPSFCPS*LIFSLS Trigger: GCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGA...GGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGGAAGCCAAGCCTGGTaGCCCTCCTGGGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWGSQAW*PSWDWR Trigger: TCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCC...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCAATCCTGGTCCCCTCCTaGAACTGCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWAILVPS*NCRDTC Trigger: GCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGAT...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCAGACTTATCTTCTCCCTaGGCTGCTGCTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWADLSSP*AAAAGC Trigger: GCAGCCTGCAGCAGCAGCTCAGGGAGAAGATAAGTC...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATCCCTGAGCTGCTGCTaGAGGCTGCTATTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWASLSCC*RLLLVA Trigger: AGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGA...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTCCCTGAGCTGCTGCTaGAGGCTGCTATTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHSLSCC*RLLLVA Trigger: AGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGA...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGCAAGCCGGCCACTCCACTGCCCCTGGTTCCACCATCACCACTTACCTCTGGAGGACAGAGATGTaGAGTATTTTTGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQAGHSTAPGSTITTYLWRTEM*SIFGSP Trigger: AGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCA...GAGGTAAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTGGCCGGCTTGCAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR GCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGAACTGCCGAGACACCTaGAGATCTGCTTTGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKNCRDT*RSALSA Trigger: AGCGGACAAAGCAGATCTGCAGGTGTCTCGGCAGTT...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGGGGAAGCCAAGCCTaGTGGCCCTCCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSRGSQA*WPSWDW Trigger: CCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCT...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGATCCTGGTCCCCTCCTaGAACTGCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWILVPS*NCRDTC Trigger: GCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGAT...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWVLVNL*SRSLLR Trigger: GCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCAC...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATCTGGGCAGAGAAACCTaGGGGGCGTCAGAGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHLGRET*GASERY Trigger: ATACCTCTCTGACGCCCCCCAGGTTTCTCTGCCCAG...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 |
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| 3UTR CAA 72 bp | CTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTaGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSEACELRLPT*AFGIPCKDSAL Trigger: AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR TCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHELPGR*QPPLTS Trigger: TGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTC...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR TCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTCTTTCCGAGCCTTCTaGAGCTCCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHSFRAF*SSTSFC Trigger: GCAGAAGGAGGTGGAGCTTCAGAAGGCTCGGAAAGA...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTCCCTGAGCTGCTGCTaGAGGCTGCTATTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSSLSCC*RLLLVA Trigger: AGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGA...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR GCA 90 bp | CCTGTAGGACTTCCTTTCTTAAGCTCTTGTCCCACCACCTGCCTGGAGATTCAGTCCCTGAGCTGCTGCTaGAGGCTGCTATTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVGLPFLSSCPTTCLEIQSLSCC*RLLLVA Trigger: AGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGA...CTGAATCTCCAGGCAGGTGGTGGGACAAGAGCTTAAGAAAGGAAGTCCTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR GCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTTCTCCCTGAGCTGCTaGTGCAGGCTGCTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHFSLSC*CRLLLV Trigger: CACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAA...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTCTCCCTGAGCTGCTaGTGCAGGCTGCTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWAFSLSC*CRLLLV Trigger: CACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAA...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTGGCCCTCCTGGGACTaGAGACACTTGCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHWPSWD*RHLHIL Trigger: GAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCA...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGGCCCTCCTGGGACTaGAGACACTTGCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWAWPSWD*RHLHIL Trigger: GAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCA...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGGCCTGGTGGCCCTCCTaGGACTGGAGACACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKAWWPS*DWRHLH Trigger: GTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGC...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAGGAAGCCAAGCCTGGTaGCCCTCCTGGGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSGSQAW*PSWDWR Trigger: TCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCC...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGAGGGGAAGCCAAGCCTaGTGGCCCTCCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQRGSQA*WPSWDW Trigger: CCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCT...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | GATGCTGGGAACAGTGATGAGACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAATCCTGGTCCCCTCCTaGAACTGCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DAGNSDETSLSTGSVPRGILVPS*NCRDTC Trigger: GCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGAT...TCCTCTTGGAACAGACCCTGTAGAAAGAGAGGTCTCATCACTGTTCCCAGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGTGGCTTCCCAAATCCTaGTCCCCTCCTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWWLPKS*SPPGTA Trigger: GGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCA...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCGCAGCCCTGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCCGAATGCTGCCAGTTTaGAGGACAGAGATGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASQPWSPRSGPPLNNNPRMLPV*RTEMCS Trigger: ACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCG...GGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCAGGGCTGCGAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR TCA 90 bp | ACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCGCACATTCTCGTAGGTaGGTTCCCCATCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLSTGSVPRGGPSATLPAHSRR*VPHLHR Trigger: CCTATGAAGATGGGGAACTCACCTACGAGAATGTGC...GGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCTGTAGAAAGAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGTCTTTCCGAGCCTTCTaGAGCTCCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSFWSSFQASSRSSLSWSFRAF*SSTSFC Trigger: GCAGAAGGAGGTGGAGCTTCAGAAGGCTCGGAAAGA...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTCTTTCCGAGCCTTCTaGAGCTCCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSSFRAF*SSTSFC Trigger: GCAGAAGGAGGTGGAGCTTCAGAAGGCTCGGAAAGA...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTTCTCCCTGAGCTGCTaGTGCAGGCTGCTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSFSLSC*CRLLLV Trigger: CACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAA...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGCCCTCCTGGGACTaGAGACACTTGCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSWPSWD*RHLHIL Trigger: GAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCA...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKFSGSP*SSLSQP Trigger: AGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAA...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSVLVNL*SRSLLR Trigger: GCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCAC...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCGACTTATCTTCTCCCTaGGCTGCTGCTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSDLSSP*AAAAGC Trigger: GCAGCCTGCAGCAGCAGCTCAGGGAGAAGATAAGTC...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAGACTTATCTTCTCCCTaGGCTGCTGCTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSDLSSP*AAAAGC Trigger: GCAGCCTGCAGCAGCAGCTCAGGGAGAAGATAAGTC...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR GCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGTGGAGGACAGAGATGTaGAGTATTTTTGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKWRTEM*SIFGSP Trigger: AGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCA...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGCCTGGTGGCCCTCCTaGGACTGGAGACACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPAWWPS*DWRHLH Trigger: GTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGC...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGATCCTGGTCCCCTCCTaGAACTGCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQILVPS*NCRDTC Trigger: GCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGAT...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCATCCTGGTCCCCTCCTaGAACTGCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSILVPS*NCRDTC Trigger: GCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGAT...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCATGGCTTCCCAAATCCTaGTCCCCTCCTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSWLPKS*SPPGTA Trigger: GGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCA...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGTGGCTTCCCAAATCCTaGTCCCCTCCTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKWLPKS*SPPGTA Trigger: GGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCA...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTGGCTTCCCAAATCCTaGTCCCCTCCTGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSWLPKS*SPPGTA Trigger: GGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCA...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | GAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGTGATGAGACCTCTCTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIQGLSLEQMLGTVMRPLFSGSP*SSLSQP Trigger: AGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAA...GAGAGGTCTCATCACTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSGGFFTLPKRSPVSGAAVLVNL*SRSLLR Trigger: GCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCAC...AGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCACGAATGCTGCCAGTTTaGAGGACAGAGATGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWARMLPV*RTEMCS Trigger: ACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCG...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATCGAATGCTGCCAGTTTaGAGGACAGAGATGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHRMLPV*RTEMCS Trigger: ACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCG...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCGCACATTCTCGTAGGTaGGTTCCCCATCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSAHSRR*VPHLHR Trigger: CCTATGAAGATGGGGAACTCACCTACGAGAATGTGC...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCACGCAGTTGGTTGCTCTaGCCCGACCCCTGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPRSWLL*PDPCFV Trigger: GACAAAGCAGGGGTCGGGTCAGAGCAACCAACTGCG...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSELPGR*QPPLTS Trigger: TGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTC...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTCCTTCTGCCCCAGCTaGCTTATCTTCTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSSFCPS*LIFSLS Trigger: GCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGA...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGTCCTTCTGCCCCAGCTaGCTTATCTTCTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKSFCPS*LIFSLS Trigger: GCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGA...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTCACAAATGCAGGGGTaGAGCTCTGCACACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSSQMQG*SSAHLE Trigger: TTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGA...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCATTCTCCCTGAGCTGCTaGTGCAGGCTGCTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSFSLSC*CRLLLV Trigger: CACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAA...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCATGGCCCTCCTGGGACTaGAGACACTTGCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSWPSWD*RHLHIL Trigger: GAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCA...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCGCCTGGTGGCCCTCCTaGGACTGGAGACACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRKVKSFLEASLLFPREVAWWPS*DWRHLH Trigger: GTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGC...GACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWAFSGSP*SSLSQP Trigger: AGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAA...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTCTGGGCAGAGAAACCTaGGGGGCGTCAGAGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGGFFTLPKRSPVSGAALGRET*GASERY Trigger: ATACCTCTCTGACGCCCCCCAGGTTTCTCTGCCCAG...AGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCGAAGCTCTGCACACTTaGAAATTGTTCTTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LAFGIPCKDSALAGQCQPEALHT*KLFFPT Trigger: AGTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTC...GGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSELPGR*QPPLTS Trigger: TGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTC...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSGGFFTLPKRSPVSGAAELPGR*QPPLTS Trigger: TGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTC...AGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGTCCTTCTGCCCCAGCTaGCTTATCTTCTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQSFCPS*LIFSLS Trigger: GCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGA...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATCCCTGAGCTGCTGCTaGAGGCTGCTATTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPSLSCC*RLLLVA Trigger: AGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRKVKSFLEASLLFPREVVLVNL*SRSLLR Trigger: GCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCAC...GACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGGCACATTCTCGTAGGTaGGTTCCCCATCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKAHSRR*VPHLHR Trigger: CCTATGAAGATGGGGAACTCACCTACGAGAATGTGC...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAGCACATTCTCGTAGGTaGGTTCCCCATCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEASLLFPREVQFLEQLSAHSRR*VPHLHR Trigger: CCTATGAAGATGGGGAACTCACCTACGAGAATGTGC...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATCCTTCTGCCCCAGCTaGCTTATCTTCTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPSFCPS*LIFSLS Trigger: GCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATCTTTCCGAGCCTTCTaGAGCTCCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPSFRAF*SSTSFC Trigger: GCAGAAGGAGGTGGAGCTTCAGAAGGCTCGGAAAGA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGAATATGTTTTTATCCTaGCACAATGTCGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKNMFLS*HNVGFE Trigger: CTCAAAGCCGACATTGTGTCAGGATAAAAACATATT...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGTCACAAATGCAGGGGTaGAGCTCTGCACACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKSQMQG*SSAHLE Trigger: TTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGA...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCAGAAGCTCTGCACACTTaGAAATTGTTCTTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSFWSSFQASSRSSLSWAEALHT*KLFFPT Trigger: AGTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTC...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCTCTTTCCGAGCCTTCTaGAGCTCCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRKVKSFLEASLLFPREVSFRAF*SSTSFC Trigger: GCAGAAGGAGGTGGAGCTTCAGAAGGCTCGGAAAGA...GACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCTCACAAATGCAGGGGTaGAGCTCTGCACACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSSQMQG*SSAHLE Trigger: TTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGA...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSFSGSP*SSLSQP Trigger: AGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAA...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCCGAATGCTGCCAGTTTaGAGGACAGAGATGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSRMLPV*RTEMCS Trigger: ACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCG...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATCACAAATGCAGGGGTaGAGCTCTGCACACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPSQMQG*SSAHLE Trigger: TTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGTGGAGGACAGAGATGTaGAGTATTTTTGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGFFTLPKRSPVSGAAFKWRTEM*SIFGSP Trigger: AGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCA...CTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTGGAGGACAGAGATGTaGAGTATTTTTGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSWRTEM*SIFGSP Trigger: AGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCA...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQFSGSP*SSLSQP Trigger: AGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAA...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| 3UTR CAA 72 bp | CACTGTCCCATTGGGATCACCGAACTAGACACAGCATaGCTGACACACAGGACTAACACGTGCAAAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPIGITELDTA*LTHRTNTCKVF Trigger: AAATACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCCCAATGGGACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCAATATGTTTTTATCCTaGCACAATGTCGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSSFWSSFQASSRSSLSNMFLS*HNVGFE Trigger: CTCAAAGCCGACATTGTGTCAGGATAAAAACATATT...GCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGGTCGGCTCCACTTCTTaGTCATCTGTATCCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQVGSTS*SSVSNM Trigger: CATATTGGATACAGATGAGCAAGAAGTGGAGCCGAC...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107925.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCGAATGCTGCCAGTTTaGAGGACAGAGATGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVKSFLEASLLFPREVRMLPV*RTEMCS Trigger: ACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCG...GACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATGGAGGACAGAGATGTaGAGTATTTTTGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPWRTEM*SIFGSP Trigger: AGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCGAAGCTCTGCACACTTaGAAATTGTTCTTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSEALHT*KLFFPT Trigger: AGTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTC...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGGAAGCTCTGCACACTTaGAAATTGTTCTTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQEALHT*KLFFPT Trigger: AGTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTC...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAATATGTTTTTATCCTaGCACAATGTCGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSNMFLS*HNVGFE Trigger: CTCAAAGCCGACATTGTGTCAGGATAAAAACATATT...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107926.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGAATATGTTTTTATCCTaGCACAATGTCGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPREVQFLEQLSSKQNMFLS*HNVGFE Trigger: CTCAAAGCCGACATTGTGTCAGGATAAAAACATATT...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107926.8 |
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| CDS GCA 90 bp | TGCCTGAGAGCAGACGAGTTCACAGAGCTCCAGGTCGCAGTTGGTTaGTCTGACCCGACCCCTGCTTTGTCCGCTAGTGCAGGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLRADEFTELQVAVG*SDPTPALSASAGEA Trigger: GGCTTCCCCTGCACTAGCGGACAAAGCAGGGGTCGGGTCAGAGCAACCAACTGCGACCTGGAGCTCTGTGAACTCGTCTGCTCTCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 90 bp | AGGTGTCTGATGAATCAGAGAAGAAGCGCCTCAGTGTCTCCCGCGTaGTTGTCAACCTCTGGTCCAGGTCCCTCCTCCGCTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCLMNQRRSASVSPA*LSTSGPGPSSAPPQ Trigger: CTGAGGAGGAGCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCACGCGGGAGACACTGAGGCGCTTCTTCTCTGATTCATCAGACACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CCA 90 bp | GGTCCAGGTCCCTCCTCCGCTCCTCCTCAGTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCTGGCAGGCTTGTAGTTGCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGPSSAPPQFSGSP*SSLSQPGRLVVAAQ Trigger: CTGAGCAGCAACTACAAGCCTGCCAGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAACTGAGGAGGAGCGGAGGAGGGACCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CCA 90 bp | TCAGAGAAGAAGCGCCTCAGTGTCTCCCGCGTGCTTGTCAACCTCTaGTCCAGGTCCCTCCTCCGCTCCTCCTCAGTTTTCAGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEKKRLSVSRVLVNL*SRSLLRSSSVFRFS Trigger: GGAGAACCTGAAAACTGAGGAGGAGCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCACGCGGGAGACACTGAGGCGCTTCTTCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS TCA 90 bp | CCTGGAACTGCCGAGACACCTGCAGATAGCGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCAGACAGGACACGAGAAGGCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGTAETPADSELPGR*QPPLTSDRTREGQA Trigger: TGCTTGGCCTTCTCGTGTCCTGTCTGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTCGCTATCTGCAGGTGTCTCGGCAGTTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS TCA 90 bp | GCTCTCTCAGCCTGGCAGGCTTGTAGTTGCTGCTCAGCGTCCTCGTaGGTCCTCTGCTTCTCCTGTAATGTGTCCTGGCTCGAGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALSAWQACSCCSASS*VLCFSCNVSWLEIS Trigger: GCTGATCTCGAGCCAGGACACATTACAGGAGAAGCAGAGGACTCACGAGGACGCTGAGCAGCAACTACAAGCCTGCCAGGCTGAGAGAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 90 bp | AGGCTGCTATTGGTGGCTTCCCAAATCCTGGTCCCCTCCTGGAACTaGCGAGACACCTGCAGATCTGCTTTGTCCGCTAGTGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLLLVASQILVPSWN*RDTCRSALSASAGE Trigger: TTCCCCTGCACTAGCGGACAAAGCAGATCTGCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGATTTGGGAAGCCACCAATAGCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS TCA 90 bp | TCTGAAGCTCCACCTCCTTCTGCCCCAGCTGACTTATCTTCTCCCTaGGCTGCTGCTGCAGGCTGCTATTGGTGGCTTCCCAAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAPPPSAPADLSSP*AAAAGCYWWLPKSW Trigger: CCAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCAGCAGCTCAGGGAGAAGATAAGTCAGCTGGGGCAGAAGGAGGTGGAGCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGTGGGACTGGAGACACTaGCACATTCTCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKWDWRH*HILVGE Trigger: CTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCA...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | ACCTCTCTTTCTACAGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCTGCTGCAGGCTGCTATaGGTGGCTTCCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLSTGSVPRGGPSATLPCCRLL*VASQIL Trigger: CAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCA...GGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCTGTAGAAAGAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR CAA 90 bp | TGGTCTCCTAGATCAGGACCTCCCCTCAACAATAATCCCCCTGCTGTGGTGGTGTGGGACTGGAGACACTaGCACATTCTCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WSPRSGPPLNNNPPAVVVWDWRH*HILVGE Trigger: CTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCA...CACCACCACAGCAGGGGGATTATTGTTGAGGGGAGGTCCTGATCTAGGAGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR CAA 90 bp | CCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATTGCTGCAGGCTGCTATaGGTGGCTTCCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSGAAFKQAAGHPLAGHCCRLL*VASQIL Trigger: CAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCA...ATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | CCACTCAGCGGAGCGCCCTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGGCCAAGCAAGAAGTATaGCAAGCAGACTGTAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLSGAPSPDPSLVWEVLKAKQEV*QADCRT Trigger: GGTCCTACAGTCTGCTTGCAATACTTCTTGCTTGGC...CTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAGGGCGCTCCGCTGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098105.4 |
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| CDS-3UTR CAA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGGGACTGGAGACACTaGCACATTCTCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSFWSSFQASSRSSLSWAWDWRH*HILVGE Trigger: CTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCA...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | GCCCCTGTAGGACTTCCTTTCTTAAGCTCTTGTCCCACCACCTGCCTGGAGATTTCGAATGCTGCCAGTTaGGAGGACAGAGATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: APVGLPFLSSCPTTCLEISNAAS*EDRDVQ Trigger: CTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGA...AATCTCCAGGCAGGTGGTGGGACAAGAGCTTAAGAAAGGAAGTCCTACAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS GCA 90 bp | ACCCCTAACATCAGACAGGACACGAGAAGGCCAAGCAAGAAGTATTaGAAGCAGACTGTAGGACCTGCTTTGTCCGCTAGTGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPNIRQDTRRPSKKY*KQTVGPALSASAGE Trigger: TTCCCCTGCACTAGCGGACAAAGCAGGTCCTACAGTCTGCTTGCAATACTTCTTGCTTGGCCTTCTCGTGTCCTGTCTGATGTTAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098105.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGTGGGACTGGAGACACTaGCACATTCTCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSSFWSSFQASSRSSLSWWDWRH*HILVGE Trigger: CTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCA...CCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | GAGATTCAGGGCCTCAGCTTGGAGCAGATGCTGGGAACAGTGATGAGACCTCTCAGATGTGCAGTATTTTaGGCTCTCCTCCAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIQGLSLEQMLGTVMRPLRCAVF*ALLQTS Trigger: GGAAGTCTGGAGGAGAGCCAAAAATACTGCACATCT...GAGAGGTCTCATCACTGTTCCCAGCATCTGCTCCAAGCTGAGGCCCTGAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTGCTGCAGGCTGCTATaGGTGGCTTCCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFWRLLYSSQEKSSFWSSCCRLL*VASQIL Trigger: CAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCA...GCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCAAGATGTGCAGTATTTTaGGCTCTCCTCCAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFWSSFQASSRSSLSWARCAVF*ALLQTS Trigger: GGAAGTCTGGAGGAGAGCCAAAAATACTGCACATCT...TGCCCAGCTAAGGGATGACCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCTGCTGCAGGCTGCTATaGGTGGCTTCCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSCCRLL*VASQIL Trigger: CAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCA...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATGCTGCAGGCTGCTATaGGTGGCTTCCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPCCRLL*VASQIL Trigger: CAGGATTTGGGAAGCCACCAATAGCAGCCTGCAGCA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | AGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCTCGAATGCTGCCAGTTaGGAGGACAGAGATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFWRLLYSSQEKSSFWSSNAAS*EDRDVQ Trigger: CTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGA...GCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTCGAATGCTGCCAGTTaGGAGGACAGAGATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSGGFFTLPKRSPVSGAASNAAS*EDRDVQ Trigger: CTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGA...AGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCATGGGACTGGAGACACTaGCACATTCTCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KEGQVFSGGFFTLPKRSPWDWRH*HILVGE Trigger: CTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCA...TGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGATGTGCAGTATTTTaGGCTCTCCTCCAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEASLLFPREVQFLEQLSRCAVF*ALLQTS Trigger: GGAAGTCTGGAGGAGAGCCAAAAATACTGCACATCT...TGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | TCTTTACTCTTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGGCCAAGCAAGAAGTATaGCAAGCAGACTGTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLFPREVQFLEQLSSKQAKQEV*QADCRT Trigger: TGTCCTACAGTCTGCTTGCAATACTTCTTGCTTGGC...CTGCTTGCTTGAAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAAGAGTAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS-3UTR CAA 90 bp | TTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCTCGAATGCTGCCAGTTaGGAGGACAGAGATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRKVKSFLEASLLFPREVSNAAS*EDRDVQ Trigger: CTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGA...GACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTGACCTTCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 90 bp | GGCGTCAGAGAGGTATTCATAGTAATACTTAGAAGGTTCATCGAATaGTGCCAGTTTGGAGGACAGAGATGTGCAGTATTTTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVREVFIVILRRFIE*CQFGGQRCAVFLAL Trigger: GAGAGCCAAAAATACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGATGAACCTTCTAAGTATTACTATGAATACCTCTCTGACGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 |
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| CDS CAA 90 bp | ACAGAGCTCCAGGTCGCAGTTGGTTGCTCTGACCCGACCCCTGCTTaGTCCGCTAGTGCAGGGGAAGCCAAGCCTGGTGGCCCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TELQVAVGCSDPTPA*SASAGEAKPGGPPG Trigger: CCCAGGAGGGCCACCAGGCTTGGCTTCCCCTGCACTAGCGGACAAAGCAGGGGTCGGGTCAGAGCAACCAACTGCGACCTGGAGCTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 72 bp | CAGGTCGCAGTTGGTTGCTCTGACCCGACCCCTGCTTaGTCCGCTAGTGCAGGGGAAGCCAAGCCTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVAVGCSDPTPA*SASAGEAKPGG Trigger: GCCACCAGGCTTGGCTTCCCCTGCACTAGCGGACAAAGCAGGGGTCGGGTCAGAGCAACCAACTGCGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CCA 72 bp | TGCAGGGGAAGCCAAGCCTGGTGGCCCTCCTGGGACTaGAGACACTTGCACATTCTCGTAGGTGAGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CRGSQAWWPSWD*RHLHILVGEFP Trigger: GGGGAACTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | CAAATCCTGGTCCCCTCCTGGAACTGCCGAGACACCTaGAGATCTGCTTTGTCCGCTAGTGCAGGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QILVPSWNCRDT*RSALSASAGEA Trigger: GGCTTCCCCTGCACTAGCGGACAAAGCAGATCTGCAGGTGTCTCGGCAGTTCCAGGAGGGGACCAGGATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098104.10 |
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| CDS CAA 90 bp | TGCAGGGGAAGCCAAGCCTGGTGGCCCTCCTGGGACTGGAGACACTaGCACATTCTCGTAGGTGAGTTCCCCATCTTCATAGGCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CRGSQAWWPSWDWRH*HILVGEFPIFIGLT Trigger: TGTGAGGCCTATGAAGATGGGGAACTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCTTCCCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 90 bp | TGGTCCAGGTCCCTCCTCCGCTCCTCCTCAGTTTTCAGGTTCTCCTaGGTCTTCGCTCTCTCAGCCTGGCAGGCTTGTAGTTGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WSRSLLRSSSVFRFS*VFALSAWQACSCCS Trigger: TGAGCAGCAACTACAAGCCTGCCAGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAACTGAGGAGGAGCGGAGGAGGGACCTGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 90 bp | AGAAGGCCAAGCAAGAAGTATTGCAAGCAGACTGTAGGACCTGCTTaGTCCGCTAGTGCAGGGGAAGCCAAGCCTGGTGGCCCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPSKKYCKQTVGPA*SASAGEAKPGGPPG Trigger: CCCAGGAGGGCCACCAGGCTTGGCTTCCCCTGCACTAGCGGACAAAGCAGGTCCTACAGTCTGCTTGCAATACTTCTTGCTTGGCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098105.4 |
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| CDS TCA 72 bp | GCCTGGCAGGCTTGTAGTTGCTGCTCAGCGTCCTCGTaGGTCCTCTGCTTCTCCTGTAATGTGTCCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AWQACSCCSASS*VLCFSCNVSWL Trigger: GAGCCAGGACACATTACAGGAGAAGCAGAGGACTCACGAGGACGCTGAGCAGCAACTACAAGCCTGCCAGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | ATGAATCAGAGAAGAAGCGCCTCAGTGTCTCCCGCGTaGTTGTCAACCTCTGGTCCAGGTCCCTCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: MNQRRSASVSPA*LSTSGPGPSSA Trigger: AGCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCACGCGGGAGACACTGAGGCGCTTCTTCTCTGATTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 90 bp | TGTCTGATGAATCAGAGAAGAAGCGCCTCAGTGTCTCCCGCGTGCTaGTCAACCTCTGGTCCAGGTCCCTCCTCCGCTCCTCCTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CLMNQRRSASVSPAC*STSGPGPSSAPPQF Trigger: AAACTGAGGAGGAGCGGAGGAGGGACCTGGACCAGAGGTTGACAAGCACGCGGGAGACACTGAGGCGCTTCTTCTCTGATTCATCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS TCA 72 bp | GCCGAGACACCTGCAGATAGCGAACTCCCAGGCAGATaGCAGCCACCCCTAACATCAGACAGGACACGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AETPADSELPGR*QPPLTSDRTRE Trigger: TTCTCGTGTCCTGTCTGATGTTAGGGGTGGCTGTCATCTGCCTGGGAGTTCGCTATCTGCAGGTGTCTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CCA 72 bp | CCCTCCTCCGCTCCTCCTCAGTTTTCAGGTTCTCCTTaGTCTTCGCTCTCTCAGCCTGGCAGGCTTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSAPPQFSGSP*SSLSQPGRLVV Trigger: AACTACAAGCCTGCCAGGCTGAGAGAGCGAAGACCAAGGAGAACCTGAAAACTGAGGAGGAGCGGAGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 72 bp | AGCCAAGCCTGGTGGCCCTCCTGGGACTGGAGACACTaGCACATTCTCGTAGGTGAGTTCCCCATCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SQAWWPSWDWRH*HILVGEFPIFI Trigger: TATGAAGATGGGGAACTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCAGGAGGGCCACCAGGCTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CAA 72 bp | AGCAAGAAGTATTGCAAGCAGACTGTAGGACCTGCTTaGTCCGCTAGTGCAGGGGAAGCCAAGCCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SKKYCKQTVGPA*SASAGEAKPGG Trigger: GCCACCAGGCTTGGCTTCCCCTGCACTAGCGGACAAAGCAGGTCCTACAGTCTGCTTGCAATACTTCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098105.4 |
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| CDS TCA 72 bp | CTCCTGGGACTGGAGACACTTGCACATTCTCGTAGGTaGGTTCCCCATCTTCATAGGCCTCACAGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLGLETLAHSRR*VPHLHRPHSPV Trigger: GACAGGACTGTGAGGCCTATGAAGATGGGGAACTCACCTACGAGAATGTGCAAGTGTCTCCAGTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | AAGTATTGCAAGCAGACTGTAGGACAGCGGGGAATCTaGCTGAGAGCAGACGAGTTCACAGAGCTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KYCKQTVGQRGI*LRADEFTELQV Trigger: GACCTGGAGCTCTGTGAACTCGTCTGCTCTCAGGCAGATTCCCCGCTGTCCTACAGTCTGCTTGCAATACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030179.11 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS CCA 72 bp | GCTGCCAGTTTGGAGGACAGAGATGTGCAGTATTTTTaGCTCTCCTCCAGACTTCCGAGGGTATGTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: AASLEDRDVQYF*LSSRLPRVCEM Trigger: CATCTCACATACCCTCGGAAGTCTGGAGGAGAGCCAAAAATACTGCACATCTCTGTCCTCCAAACTGGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS TCA 72 bp | GGAAACCTGAAAGCCTCCGACTCACAAATGCAGGGGTaGAGCTCTGCACACTTGGAAATTGTTCTTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GNLKASDSQMQG*SSAHLEIVLSH Trigger: GTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGAGTCGGAGGCTTTCAGGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | ATCAGACAGGACACGAGAAGGCCAAGCAAGAAGTATTaGAAGCAGACTGTAGGACCTGCTTTGTCCGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: IRQDTRRPSKKY*KQTVGPALSAS Trigger: ACTAGCGGACAAAGCAGGTCCTACAGTCTGCTTGCAATACTTCTTGCTTGGCCTTCTCGTGTCCTGTCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098105.4 |
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| CDS GCA 72 bp | GAAAGCCTCCGACTCACAAATGCAGGGGTGAAGCTCTaGACACTTGGAAATTGTTCTTTCCCACTTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ESLRLTNAGVKL*TLGNCSFPLLV Trigger: TACCAGAAGTGGGAAAGAACAATTTCCAAGTGTGCAGAGCTTCACCCCTGCATTTGTGAGTCGGAGGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | GTCGGCTTTGAGAGTCAGAGTCCTGCCTCCACTTCTTaGTCATCTGTATCCAATATGACTTCGAACGATCTA | + |
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Preference number: 6 (lower is better) Translates to: VGFESQSPASTS*SSVSNMTSNDL Trigger: TAGATCGTTCGAAGTCATATTGGATACAGATGAGCAAGAAGTGGAGGCAGGACTCTGACTCTCAAAGCCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107926.8 |
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| CDS TCA 72 bp | GTATTTTTGGCTCTCCTCCAGACTTCCGAGGGTATGTaGGATGTAAAAGCACCTTTCCTGATATGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: VFLALLQTSEGM*DVKAPFLIWNP Trigger: TGGATTCCATATCAGGAAAGGTGCTTTTACATCTCACATACCCTCGGAAGTCTGGAGGAGAGCCAAAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030179.11 ENSMUST00000098104.10 ENSMUST00000098105.4 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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| CDS GCA 72 bp | GAGGTATTCATAGTAATACTTAGAAGGTTCATCGAATaGTGCCAGTTTGGAGGACAGAGATGTGCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: EVFIVILRRFIE*CQFGGQRCAVF Trigger: AAATACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGATGAACCTTCTAAGTATTACTATGAATACCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030179.11 ENSMUST00000098105.4 |
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| CDS GCA 72 bp | AGAAACTTCATAGTAATACTTAGAAGGTTCATCGAATaGTGCCAGTTTGGAGGACAGAGATGTGCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: RNFIVILRRFIE*CQFGGQRCAVF Trigger: AAATACTGCACATCTCTGTCCTCCAAACTGGCAGCATTCGATGAACCTTCTAAGTATTACTATGAAGTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098104.10 ENSMUST00000107925.8 ENSMUST00000107926.8 |
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