Pregenerated sensors for CD70 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019489

Ensembl transcript IDs: ENSMUST00000019633.8

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ACTGTACAGTCCTGTCCAAAGCGCCCACGCAGCAAGCTGATGCCGTaGGCAGCGGGGGAGCAGATGCCCACAGCCAGGGTGGCCCTGTGC	+
Preference number: 5 (lower is better) Translates to: TVQSCPKRPRSKLMP*AAGEQMPTARVALC Trigger: GCACAGGGCCACCCTGGCTGTGGGCATCTGCTCCCCCGCTGCGCACGGCATCAGCTTGCTGCGTGGGCGCTTTGGACAGGACTGTACAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS GCA 90 bp	GGGAGCAGATGCCCACAGCCAGGGTGGCCCTGTGCTGCAGGGTGCTaGCTGGGGAAGAGCAGTTGGCCAGTGTCACCTGGATATGCAGCC	+
Preference number: 5 (lower is better) Translates to: GSRCPQPGWPCAAGC*LGKSSWPVSPGYAA Trigger: GGCTGCATATCCAGGTGACACTGGCCAACTGCTCTTCCCCAGGCAGCACCCTGCAGCACAGGGCCACCCTGGCTGTGGGCATCTGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 90 bp	GCCCTCCTCCAGCTCTGGTCCGTGTGTGAAGGACCTTCCCAAGGCTaGGCCTGCTCCCCAGCGCAGTGTGGGGTCCTTCCGAGGAACTGT	+
Preference number: 5 (lower is better) Translates to: ALLQLWSVCEGPSQG*ACSPAQCGVLPRNC Trigger: ACAGTTCCTCGGAAGGACCCCACACTGCGCTGGGGAGCAGGCCCAGCCTTGGGAAGGTCCTTCACACACGGACCAGAGCTGGAGGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS TCA 90 bp	GTAATGCCACTGTACAGTCCTGTCCAAAGCGCCCACGCAGCAAGCTaGTGCCGTGCGCAGCGGGGGAGCAGATGCCCACAGCCAGGGTGG	+
Preference number: 5 (lower is better) Translates to: VMPLYSPVQSAHAAS*CRAQRGSRCPQPGW Trigger: CCACCCTGGCTGTGGGCATCTGCTCCCCCGCTGCGCACGGCATCAGCTTGCTGCGTGGGCGCTTTGGACAGGACTGTACAGTGGCATTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS GCA 90 bp	CTCCAGCTCTGGTCCGTGTGTGAAGGACCTTCCCAAGGCTGGGCCTaGTCCCCAGCGCAGTGTGGGGTCCTTCCGAGGAACTGTGAGATT	+
Preference number: 5 (lower is better) Translates to: LQLWSVCEGPSQGWA*SPAQCGVLPRNCEI Trigger: AATCTCACAGTTCCTCGGAAGGACCCCACACTGCGCTGGGGAGCAGGCCCAGCCTTGGGAAGGTCCTTCACACACGGACCAGAGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 90 bp	AACACAGTAATAAACACCACCAGCAGCAGCCATGGCCATTGGCGCTaGAACGCGGTCCCGCTCCAGCGAACCCAGGGGCAAGGGCGACCT	+
Preference number: 5 (lower is better) Translates to: NTVINTTSSSHGHWR*NAVPLQRTQGQGRP Trigger: AGGTCGCCCTTGCCCCTGGGTTCGCTGGAGCGGGACCGCGTTCCAGCGCCAATGGCCATGGCTGCTGCTGGTGGTGTTTATTACTGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 90 bp	CAGCAAAACACAGTAATAAACACCACCAGCAGCAGCCATGGCCATTaGCGCTGGAACGCGGTCCCGCTCCAGCGAACCCAGGGGCAAGGG	+
Preference number: 5 (lower is better) Translates to: QQNTVINTTSSSHGH*RWNAVPLQRTQGQG Trigger: CCCTTGCCCCTGGGTTCGCTGGAGCGGGACCGCGTTCCAGCGCCAATGGCCATGGCTGCTGCTGGTGGTGTTTATTACTGTGTTTTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 90 bp	GACGGCAGCAGAGGCAGGGTGAGGTTGGTACAGAGGACATCTCCGTaGACCAGGTATGTCAGGCGCTGTAATGCCACTGTACAGTCCTGT	+
Preference number: 5 (lower is better) Translates to: DGSRGRVRLVQRTSP*TRYVRRCNATVQSC Trigger: ACAGGACTGTACAGTGGCATTACAGCGCCTGACATACCTGGTCCACGGAGATGTCCTCTGTACCAACCTCACCCTGCCTCTGCTGCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS GCA 72 bp	TGCCCACAGCCAGGGTGGCCCTGTGCTGCAGGGTGCTaGCTGGGGAAGAGCAGTTGGCCAGTGTCACCTGGA	+
Preference number: 6 (lower is better) Translates to: CPQPGWPCAAGC*LGKSSWPVSPG Trigger: TCCAGGTGACACTGGCCAACTGCTCTTCCCCAGGCAGCACCCTGCAGCACAGGGCCACCCTGGCTGTGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 72 bp	CAGCTCTGGTCCGTGTGTGAAGGACCTTCCCAAGGCTaGGCCTGCTCCCCAGCGCAGTGTGGGGTCCTTCCG	+
Preference number: 6 (lower is better) Translates to: QLWSVCEGPSQG*ACSPAQCGVLP Trigger: CGGAAGGACCCCACACTGCGCTGGGGAGCAGGCCCAGCCTTGGGAAGGTCCTTCACACACGGACCAGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS TCA 72 bp	CTGTACAGTCCTGTCCAAAGCGCCCACGCAGCAAGCTaGTGCCGTGCGCAGCGGGGGAGCAGATGCCCACAG	+
Preference number: 6 (lower is better) Translates to: LYSPVQSAHAAS*CRAQRGSRCPQ Trigger: CTGTGGGCATCTGCTCCCCCGCTGCGCACGGCATCAGCTTGCTGCGTGGGCGCTTTGGACAGGACTGTACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS TCA 72 bp	TCTCATCAGCGTTGCGGGACGGCAGCAGAGGCAGGGTaGGGTTGGTACAGAGGACATCTCCGTGGACCAGGT	+
Preference number: 6 (lower is better) Translates to: SHQRCGTAAEAG*GWYRGHLRGPG Trigger: ACCTGGTCCACGGAGATGTCCTCTGTACCAACCTCACCCTGCCTCTGCTGCCGTCCCGCAACGCTGATGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 72 bp	ACAGTAATAAACACCACCAGCAGCAGCCATGGCCATTaGCGCTGGAACGCGGTCCCGCTCCAGCGAACCCAG	+
Preference number: 6 (lower is better) Translates to: TVINTTSSSHGH*RWNAVPLQRTQ Trigger: CTGGGTTCGCTGGAGCGGGACCGCGTTCCAGCGCCAATGGCCATGGCTGCTGCTGGTGGTGTTTATTACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CAA 90 bp	GCAGTTGGCCAGTGTCACCTGGATATGCAGCCTGTAGAGGCCATCTaGATGGATACGCAGATGGCCCTCCTCCAGCTCTGGTCCGTGTGT	+
Preference number: 6 (lower is better) Translates to: AVGQCHLDMQPVEAI*MDTQMALLQLWSVC Trigger: ACACACGGACCAGAGCTGGAGGAGGGCCATCTGCGTATCCATCAAGATGGCCTCTACAGGCTGCATATCCAGGTGACACTGGCCAACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS GCA 72 bp	CGAGGAACTGTGAGATTCAGCTGTAACTCAGCTGTGTaGGGCTCAGGGTGCTCCAGCAGCCTCTGTTGCTGC	+
Preference number: 6 (lower is better) Translates to: RGTVRFSCNSAV*GSGCSSSLCCC Trigger: GCAGCAACAGAGGCTGCTGGAGCACCCTGAGCCGCACACAGCTGAGTTACAGCTGAATCTCACAGTTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS CCA 72 bp	AGAGGCAGGGTGAGGTTGGTACAGAGGACATCTCCGTaGACCAGGTATGTCAGGCGCTGTAATGCCACTGTA	+
Preference number: 6 (lower is better) Translates to: RGRVRLVQRTSP*TRYVRRCNATV Trigger: TACAGTGGCATTACAGCGCCTGACATACCTGGTCCACGGAGATGTCCTCTGTACCAACCTCACCCTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019633.8
CDS TCA 72 bp	AGCCTCTGTTGCTGCTTACTGAGTAGTCCGCTACAATaGAACCAACAGCAAAACACAGTAATAAACACCACC	+
Preference number: 6 (lower is better) Translates to: SLCCCLLSSPLQ*NQQQNTVINTT Trigger: GGTGGTGTTTATTACTGTGTTTTGCTGTTGGTTTCATTGTAGCGGACTACTCAGTAAGCAGCAACAGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019633.8