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Pregenerated sensors for CD7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025163

Ensembl transcript IDs: ENSMUST00000026159.6

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCGGCTCCAAGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTaGTGTCAGGGTACCTGGCTAGGGTTGGTGACAGATTGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: RRLQGRYLPTPKLCF*CQGTWLGLVTDCRA
Trigger: GGCTCTGCAATCTGTCACCAACCCTAGCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTGGAGCCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR-3UTR CCA 90 bp TGGCCAGGCGGCTCCAAGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTGATGAGTTGGGCGGGGTGTaGGGGCCAGCAGGACTGCTG +
Preference number: 2 (lower is better)
Translates to: WPGGSKAGTSPPPSFVSDELGGV*GPAGLL
Trigger: CAGCAGTCCTGCTGGCCCCCACACCCCGCCCAACTC...ATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTGGAGCCGCCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR CAA 90 bp CCTGGCCAGGCGGCTCCAAGGCAGGTACCTCCCCACCCCCAAGCTTaGTTTCTGATGTCAGGGTACCTGGCTAGGGTTGGTGACAGATTG +
Preference number: 2 (lower is better)
Translates to: PGQAAPRQVPPHPQA*FLMSGYLARVGDRL
Trigger: CAATCTGTCACCAACCCTAGCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTGGAGCCGCCTGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR TCA 72 bp GGAATCCCACCCACCCAGAAGCACCAAGGGGGAATTTaGGTACCACAGGAAGAGTGCTGGGGAGTTGGGCGG +
Preference number: 3 (lower is better)
Translates to: GIPPTQKHQGGI*VPQEECWGVGR
Trigger: CCGCCCAACTCCCCAGCACTCTTCCTGTGGTACTCAAATTCCCCCTTGGTGCTTCTGGGTGGGTGGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR-3UTR CAA 90 bp CTGATGTCAGGGTACCTGGCTAGGGTTGGTGACAGATTGCAGAGCCCTGTGGGGGCACCAAGGGGGAATTaGAGTACCACAGGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: LMSGYLARVGDRLQSPVGAPRGN*STTGRV
Trigger: CACTCTTCCTGTGGTACTCAAATTCCCCCTTGGTGC...CCCCACAGGGCTCTGCAATCTGTCACCAACCCTAGCCAGGTACCCTGACATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR TCA 72 bp CAAGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTaGTGTCAGGGTACCTGGCTAGGGTTGGTGACAGAT +
Preference number: 3 (lower is better)
Translates to: QGRYLPTPKLCF*CQGTWLGLVTD
Trigger: ATCTGTCACCAACCCTAGCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
3UTR CAA 72 bp GCGGCTCCAAGGCAGGTACCTCCCCACCCCCAAGCTTaGTTTCTGATGTCAGGGTACCTGGCTAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AAPRQVPPHPQA*FLMSGYLARVG
Trigger: ACCAACCCTAGCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTGGAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR GCA 90 bp AGGACTGCTGTAAGCTCTGCTGAAACAAGGCACGGGGGACTGCAGGCAGAGGGGGTATCTTCCTCAGCATaGTGCACACCACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RTAVSSAETRHGGLQAEGVSSSA*CTPPQG
Trigger: TCCTTGGGGTGGTGTGCAGCATGCTGAGGAAGATAC...CCCCTCTGCCTGCAGTCCCCCGTGCCTTGTTTCAGCAGAGCTTACAGCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR TCA 90 bp AAGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTGATGTCAGGGTACCTGGCGGAGGGAGCTTATGGTaGTGGTCAGGTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KAGTSPPPSFVSDVRVPGGGSLW*WSGSSG
Trigger: CCCAGAAGAACCTGACCATCACCATAAGCTCCCTCC...GCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR TCA 90 bp GTGGGGGCCAGCAGGACTGCTGTAAGCTCTGCTGAAACAAGGCACGGGGGACTGAGATTCCTTAATCCCTaGGGCACACAGTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VGASRTAVSSAETRHGGLRFLNP*GTQFLD
Trigger: ATCAAGAAACTGTGTGCCTCAGGGATTAAGGAATCT...CAGTCCCCCGTGCCTTGTTTCAGCAGAGCTTACAGCAGTCCTGCTGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR GCA 90 bp TGGCCAGGCGGCTCCAAGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTGATAAGGAAAATGATGTCTaGAGAGGTTCCTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: WPGGSKAGTSPPPSFVSDKENDV*RGSWDL
Trigger: CAGATCCCAGGAACCTCTGCAGACATCATTTTCCTT...ATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCTTGGAGCCGCCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR GCA 90 bp TTACAGAGGAGGAATCCCACCCACCCAGAAGCACCAAGGGGGAATTTGAGTACCTCTTCCTCAGCATGCTaGACACCACCCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LQRRNPTHPEAPRGNLSTSSSAC*TPPQGA
Trigger: TGCTCCTTGGGGTGGTGTGCAGCATGCTGAGGAAGA...GGTACTCAAATTCCCCCTTGGTGCTTCTGGGTGGGTGGGATTCCTCCTCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR TCA 90 bp TTGTTTCTGATGTCAGGGTACCTGGCTAGGGTTGGTGACAGATTGCAGAGCCCTAGCTGGGAAGGAAAATaGTGTCTGCAGAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LFLMSGYLARVGDRLQSPSWEGK*CLQRFL
Trigger: CAGGAACCTCTGCAGACATCATTTTCCTTCCCAGCT...AGGGCTCTGCAATCTGTCACCAACCCTAGCCAGGTACCCTGACATCAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR CCA 90 bp AGGACTGCTGTAAGCTCTGCTGAAACAAGGCACGGGGGACTGCAGGCAGAGGGGATGGTCAGGTTCTTCTaGGAACCAGAGAAATTAATT +
Preference number: 4 (lower is better)
Translates to: RTAVSSAETRHGGLQAEGMVRFF*EPEKLI
Trigger: AATTAATTTCTCTGGTTCCCAGAAGAACCTGACCAT...CCCCTCTGCCTGCAGTCCCCCGTGCCTTGTTTCAGCAGAGCTTACAGCAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR CCA 90 bp TTACAGAGGAGGAATCCCACCCACCCAGAAGCACCAAGGGGGAATTTGAGTACCAGAAGCCTACAGCAATaGCAGCTGGGAAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: LQRRNPTHPEAPRGNLSTRSLQQ*QLGRKM
Trigger: CATTTTCCTTCCCAGCTGCCATTGCTGTAGGCTTCT...GGTACTCAAATTCCCCCTTGGTGCTTCTGGGTGGGTGGGATTCCTCCTCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR TCA 90 bp GTGTGTTTATTTAATTTTTCCTGGCCAGGCGGCTCCAAGGCAGGTACCTCCCCAAGGCACACAGTTTCTTaGTCTGTATCTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VCLFNFSWPGGSKAGTSPRHTVS*SVSSSA
Trigger: TGCTGAGGAAGATACAGATCAAGAAACTGTGTGCCT...TGGGGAGGTACCTGCCTTGGAGCCGCCTGGCCAGGAAAAATTAAATAAACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR TCA 90 bp GTGTGTTTATTTAATTTTTCCTGGCCAGGCGGCTCCAAGGCAGGTACCTCCCCAGTATGCTTCTTGGGATaGTTTTTCTTTCACCACAAC +
Preference number: 4 (lower is better)
Translates to: VCLFNFSWPGGSKAGTSPVCFLG*FFFHHN
Trigger: GTTGTGGTGAAAGAAAAATCATCCCAAGAAGCATAC...TGGGGAGGTACCTGCCTTGGAGCCGCCTGGCCAGGAAAAATTAAATAAACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR CAA 90 bp CTTACAGAGGAGGAATCCCACCCACCCAGAAGCACCAAGGGGGAATTTGAGTACGGACTGGTGTACGTCTaGGGCATCCAGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LTEEESHPPRSTKGEFEYGLVYV*GIQGAR
Trigger: CCTGGCCCCCTGGATGCCCAAGACGTACACCAGTCC...GTACTCAAATTCCCCCTTGGTGCTTCTGGGTGGGTGGGATTCCTCCTCTGTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS GCA 90 bp GGCACTGACTTTCCTGACAGCCTCGCAGGTGTAGTCTCCAGTGTCTaGCAGCTGGAGGGAGCTTATGGTGATGGTCAGGTTCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GTDFPDSLAGVVSSV*QLEGAYGDGQVLLG
Trigger: TCCCAGAAGAACCTGACCATCACCATAAGCTCCCTCCAGCTGGCAGACACTGGAGACTACACCTGCGAGGCTGTCAGGAAAGTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS-3UTR CAA 90 bp AGGCAGGTACCTCCCCACCCCCAAGCTTTGTTTCTGATGTCAGGGTACCTGGCTGTAGAGCAGGTGATGTaGACAGAATCCCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RQVPPHPQALFLMSGYLAVEQVM*TESPSE
Trigger: CTCTGAGGGGGATTCTGTCAACATCACCTGCTCTAC...AGCCAGGTACCCTGACATCAGAAACAAAGCTTGGGGGTGGGGAGGTACCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS CCA 90 bp ACAGCAATGGCAGCTGGGAAGGAAAATGATGTCTGCAGAGGTTCCTaGGATCTGTATGCTTCTTGGGATGATTTTTCTTTCACCACAACC +
Preference number: 5 (lower is better)
Translates to: TAMAAGKENDVCRGS*DLYASWDDFSFTTT
Trigger: GGTTGTGGTGAAAGAAAAATCATCCCAAGAAGCATACAGATCCCAGGAACCTCTGCAGACATCATTTTCCTTCCCAGCTGCCATTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS GCA 90 bp AAGAAGAAGCCTACAGCAATGGCAGCTGGGAAGGAAAATGATGTCTaGAGAGGTTCCTGGGATCTGTATGCTTCTTGGGATGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: KKKPTAMAAGKENDV*RGSWDLYASWDDFS
Trigger: AGAAAAATCATCCCAAGAAGCATACAGATCCCAGGAACCTCTGCAGACATCATTTTCCTTCCCAGCTGCCATTGCTGTAGGCTTCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS GCA 72 bp TTTCCTGACAGCCTCGCAGGTGTAGTCTCCAGTGTCTaGCAGCTGGAGGGAGCTTATGGTGATGGTCAGGTT +
Preference number: 6 (lower is better)
Translates to: FPDSLAGVVSSV*QLEGAYGDGQV
Trigger: AACCTGACCATCACCATAAGCTCCCTCCAGCTGGCAGACACTGGAGACTACACCTGCGAGGCTGTCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS CAA 72 bp ATCCCTTCCAGGTGCCCTCTTGTAGAGCAGGTGATGTaGACAGAATCCCCCTCAGAGGCAATCGTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: IPSRCPLVEQVM*TESPSEAIVSR
Trigger: CCGACTCACGATTGCCTCTGAGGGGGATTCTGTCAACATCACCTGCTCTACAAGAGGGCACCTGGAAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS GCA 72 bp ACTGGTACTGGTTGGGGATGCATGGCGTCTTGCGGTTaGTGTAGGACATGTCTTCATACACTACGCACGGAG +
Preference number: 6 (lower is better)
Translates to: TGTGWGCMASCG*CRTCLHTLRTE
Trigger: CTCCGTGCGTAGTGTATGAAGACATGTCCTACAGCAACCGCAAGACGCCATGCATCCCCAACCAGTACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS CAA 90 bp TACACTACGCACGGAGATTCCTTAATCCCTGAGGCACACAGTTTCTaGATCTGTATCTTCCTCAGCATGCTGCACACCACCCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: YTTHGDSLIPEAHSF*ICIFLSMLHTTPRS
Trigger: GCTCCTTGGGGTGGTGTGCAGCATGCTGAGGAAGATACAGATCAAGAAACTGTGTGCCTCAGGGATTAAGGAATCTCCGTGCGTAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS CAA 72 bp CACGGAGATTCCTTAATCCCTGAGGCACACAGTTTCTaGATCTGTATCTTCCTCAGCATGCTGCACACCACC +
Preference number: 6 (lower is better)
Translates to: HGDSLIPEAHSF*ICIFLSMLHTT
Trigger: GGTGGTGTGCAGCATGCTGAGGAAGATACAGATCAAGAAACTGTGTGCCTCAGGGATTAAGGAATCTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6
CDS TCA 72 bp CTGCAGAGGTTCCTGGGATCTGTATGCTTCTTGGGATaGTTTTTCTTTCACCACAACCGTGGTGAACAAGCC +
Preference number: 6 (lower is better)
Translates to: LQRFLGSVCFLG*FFFHHNRGEQA
Trigger: GGCTTGTTCACCACGGTTGTGGTGAAAGAAAAATCATCCCAAGAAGCATACAGATCCCAGGAACCTCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026159.6