Pregenerated sensors for CD69 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030156Ensembl transcript IDs: ENSMUST00000032259.6, ENSMUST00000204411.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATaGTGTAAAGTTGGTTTGTGCAGTCTTTGTGGAAAATTCAACTGC | + |
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Preference number: 1 (lower is better) Translates to: SSSSCPTVLSGVDPG*CKVGLCSLCGKFNC Trigger: GCAGTTGAATTTTCCACAAAGACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR GCA 90 bp | CAAACCACAGGGTGTGTCCTGACAGAGATCTGCCACTACACGTATTaGACTTTTCTTTCCAGCACTTTGAAATCTGCTCTACAAATATTA | + |
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Preference number: 1 (lower is better) Translates to: QTTGCVLTEICHYTY*TFLSSTLKSALQIL Trigger: TAATATTTGTAGAGCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCTGTCAGGACACACCCTGTGGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR TCA 90 bp | CAGAGATCTGCCACTACACGTATTGCACTTTTCTTTCCAGCACTTTaGAATCTGCTCTACAAATATTACTCATATGCTGTGCTTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QRSATTRIALFFPAL*NLLYKYYSYAVLLF Trigger: AAACAAAAGCACAGCATATGAGTAATATTTGTAGAGCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGATCTGCCACTACACGTATTGCACTTTTCTTTCCAGCACTTTGAAATCTGCTTAGCAGTCAGTTGGTaGCAGTTTCAGCTCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: RDLPLHVLHFSFQHFEICLAVSW*QFQLLV Trigger: GACCAGGAGCTGAAACTGTCACCAACTGACTGCTAA...GCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 90 bp | ATCTTCCTGGATCTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTaGATCCAGGATGATGTAAAGTTGGTTTGTGCAGTCTTTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: IFLDLLPHVPQFYLE*IQDDVKLVCAVFVE Trigger: TTCCACAAAGACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAGATCCAGGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 90 bp | CATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGTaGGTTTGTGCAGTCTTTGTGGAAAATTCAACTGCAGAGCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: HVPQFYLELIQDDVK*VCAVFVENSTAEQY Trigger: ATACTGCTCTGCAGTTGAATTTTCCACAAAGACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 90 bp | TCAAACCACAGGGTGTGTCCTGACAGAGATCTGCCACTACACGTATaGCACTTTTCTTTCCAGCACTTTGAAATCTGCTCTACAAATATT | + |
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Preference number: 2 (lower is better) Translates to: SNHRVCPDRDLPLHV*HFSFQHFEICSTNI Trigger: AATATTTGTAGAGCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCTGTCAGGACACACCCTGTGGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCACTCTTATTCTTTGGGGGAGAACAATTGACAAAATAATGAGGCAAAGTTTTGTGCAGTCTTTGTaGAAAATTCAACTGCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KATLILWGRTIDKIMRQSFVQSL*KIQLQS Trigger: GCTCTGCAGTTGAATTTTCCACAAAGACTGCACAAA...ACTTTGCCTCATTATTTTGTCAATTGTTCTCCCCCAAAGAATAAGAGTGGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR-3UTR GCA 90 bp | TCATTAATCAGTCAAATCTTCCTGTACCTACATTCAGCTCTTCCTACCACTGAATGTAAAGTTGGTTTGTaGAGTCTTTGTGGAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: SLISQIFLYLHSALPTTECKVGL*SLCGKF Trigger: GAATTTTCCACAAAGACTGCACAAACCAACTTTACA...TTCAGTGGTAGGAAGAGCTGAATGTAGGTACAGGAAGATTTGACTGATTAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGTCAAGGGATCTTCCTGGATCTTCTTCCTCATGTCCCACAGTTCTATCTGCAGGATGATGTAAAGTaGGTTTGTGCAGTCTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PGQGIFLDLLPHVPQFYLQDDVK*VCAVFV Trigger: CACAAAGACTGCACAAACCAACTTTACATCATCCTG...CAGATAGAACTGTGGGACATGAGGAAGAAGATCCAGGAAGATCCCTTGACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR TCA 72 bp | TGGAGTTATTCCAAGGTCAAACCACAGGGTGTGTCCTaGCAGAGATCTGCCACTACACGTATTGCACTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WSYSKVKPQGVS*QRSATTRIALF Trigger: GAAAAGTGCAATACGTGTAGTGGCAGATCTCTGTCAGGACACACCCTGTGGTTTGACCTTGGAATAACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR GCA 72 bp | GGGTGTGTCCTGACAGAGATCTGCCACTACACGTATTaGACTTTTCTTTCCAGCACTTTGAAATCTGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: GCVLTEICHYTY*TFLSSTLKSAL Trigger: TAGAGCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCTGTCAGGACACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR TCA 72 bp | TCATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATaGTGTAAAGTTGGTTTGTGCAGTCTTTGTGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SCPTVLSGVDPG*CKVGLCSLCGK Trigger: TTTTCCACAAAGACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR GCA 72 bp | TGCAGAGCAGTATCCAGTTACACAACTTTCCTGTGGTaGTATGGCACAGTCATTTATACATCTATGTATCCT | + |
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Preference number: 3 (lower is better) Translates to: CRAVSSYTTFLW*YGTVIYTSMYP Trigger: AGGATACATAGATGTATAAATGACTGTGCCATAGCACCACAGGAAAGTTGTGTAACTGGATACTGCTCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR GCA 72 bp | AAAGTTGGTTTGTGCAGTCTTTGTGGAAAATTCAACTaGAGAGCAGTATCCAGTTACACAACTTTCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: KVGLCSLCGKFN*RAVSSYTTFLW Trigger: CCACAGGAAAGTTGTGTAACTGGATACTGCTCTGCAGTTGAATTTTCCACAAAGACTGCACAAACCAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CCA 72 bp | AACTGCAGAGCAGTATCCAGTTACACAACTTTCCTGTaGTGCTATGGCACAGTCATTTATACATCTATGTAT | + |
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Preference number: 3 (lower is better) Translates to: NCRAVSSYTTFL*CYGTVIYTSMY Trigger: ATACATAGATGTATAAATGACTGTGCCATAGCACCACAGGAAAGTTGTGTAACTGGATACTGCTCTGCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAAGGGATCTTCCTGGATCTTCTTCCTCATGTCCCACAGTTCTATCTGAACTCTTGGTTGTGGTaGAGAAGAAGTAACATGTCC | + |
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Preference number: 4 (lower is better) Translates to: PGQGIFLDLLPHVPQFYLNSWLW*RRSNMS Trigger: GGACATGTTACTTCTTCTCCACCACAACCAAGAGTT...CAGATAGAACTGTGGGACATGAGGAAGAAGATCCAGGAAGATCCCTTGACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CCA 90 bp | CTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGCCAAGGCCCAACTCTTaGTTGTGGTGGAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPHVPQFYLELIQDDVKPRPNS*LWWRRS Trigger: ACTTCTTCTCCACCACAACCAAGAGTTGGGCCTTGG...CTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR GCA 90 bp | TCATTAATCAGTCAAATCTTCCTGTACCTACATTCAGCTCTTCCTACCACTGAAGACCCAGTGGAAGTTTaGCTCACAGTCCACAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SLISQIFLYLHSALPTTEDPVEV*LTVHSG Trigger: ACCGCTGTGGACTGTGAGGCAAACTTCCACTGGGTC...TTCAGTGGTAGGAAGAGCTGAATGTAGGTACAGGAAGATTTGACTGATTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 72 bp | AGGGTGTGTCCTGACAGAGATCTGCCACTACACGTATaGCACTTTTCTTTCCAGCACTTTGAAATCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVCPDRDLPLHV*HFSFQHFEICS Trigger: AGAGCAGATTTCAAAGTGCTGGAAAGAAAAGTGCAATACGTGTAGTGGCAGATCTCTGTCAGGACACACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR TCA 90 bp | CCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGTTGGTTTGTGCAGTCCCCTCTCTCCAGATGTaGAGAGCTATTTTCCGTTAT | + |
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Preference number: 4 (lower is better) Translates to: PQFYLELIQDDVKLVCAVPSLQM*RAIFRY Trigger: ATAACGGAAAATAGCTCTTCACATCTGGAGAGAGGG...GACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CCA 90 bp | CTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGCAGGTAGCAACATGGTaGTCAGATGATTCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPHVPQFYLELIQDDVKQVATW*SDDSNF Trigger: GAAGTTGGAATCATCTGACCACCATGTTGCTACCTG...CTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CCA 90 bp | CCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGTTGGTTTGTGCAGTCCCCAACTCTTGGTTGTaGTGGAGAAGAAGTAACATG | + |
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Preference number: 4 (lower is better) Translates to: PQFYLELIQDDVKLVCAVPNSWL*WRRSNM Trigger: CATGTTACTTCTTCTCCACCACAACCAAGAGTTGGG...GACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 72 bp | GATCTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTaGATCCAGGATGATGTAAAGTTGGTTTGTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: DLLPHVPQFYLE*IQDDVKLVCAV Trigger: GACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR TCA 90 bp | ATAGTGCAAATGCGTAAAGGCACTGGCTGTAGCAGTCATTCGGCAATAAATAGTGCCCATTTCCATGTCTaGTTAGCTTCATTTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVQMRKGTGCSSHSAINSAHFHV*LASFFS Trigger: GCTGAAAAATGAAGCTAATCAGACATGGAAATGGGC...ACTATTTATTGCCGAATGACTGCTACAGCCAGTGCCTTTACGCATTTGCACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR TCA 90 bp | ATAGTGCAAATGCGTAAAGGCACTGGCTGTAGCAGTCATTCGGCAATAAATAGTCCACATTTAAGGCAATaGGAGCTATTATTAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: IVQMRKGTGCSSHSAINSPHLRQ*ELLLRT Trigger: CGTCCTTAATAATAGCTCTCATTGCCTTAAATGTGG...ACTATTTATTGCCGAATGACTGCTACAGCCAGTGCCTTTACGCATTTGCACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CCA 90 bp | TCATTAATCAGTCAAATCTTCCTGTACCTACATTCAGCTCTTCCTACCACTGAATTGCAGGTAGCAACATaGTGGTCAGATGATTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SLISQIFLYLHSALPTTELQVAT*WSDDSN Trigger: GTTGGAATCATCTGACCACCATGTTGCTACCTGCAA...TTCAGTGGTAGGAAGAGCTGAATGTAGGTACAGGAAGATTTGACTGATTAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| 3UTR CAA 72 bp | CAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGTaGGTTTGTGCAGTCTTTGTGGAAAATTCAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: QFYLELIQDDVK*VCAVFVENSTA Trigger: TGCAGTTGAATTTTCCACAAAGACTGCACAAACCAACTTTACATCATCCTGGATCAACTCCAGATAGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR TCA 90 bp | AAGGCCACTCTTATTCTTTGGGGGAGAACAATTGACAAAATAATGAGGCAAAGTACATGTCCTCTTGTATaGAATCCACTCATTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KATLILWGRTIDKIMRQSTCPLV*NPLILA Trigger: TGCAAGAATGAGTGGATTTCATACAAGAGGACATGT...ACTTTGCCTCATTATTTTGTCAATTGTTCTCCCCCAAAGAATAAGAGTGGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR TCA 90 bp | AAGGCCACTCTTATTCTTTGGGGGAGAACAATTGACAAAATAATGAGGCAAAGTCGTCATGTCCTTTTCTaGATCAATTACAGCAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KATLILWGRTIDKIMRQSRHVLF*INYSKS Trigger: ACTCTTGCTGTAATTGATTCAGAAAAGGACATGACG...ACTTTGCCTCATTATTTTGTCAATTGTTCTCCCCCAAAGAATAAGAGTGGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CAA 90 bp | ATAGTGCAAATGCGTAAAGGCACTGGCTGTAGCAGTCATTCGGCAATAAATAGTAGACCCAGTGGAAGTTaGCCTCACAGTCCACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: IVQMRKGTGCSSHSAINSRPSGS*PHSPQR Trigger: CCGCTGTGGACTGTGAGGCAAACTTCCACTGGGTCT...ACTATTTATTGCCGAATGACTGCTACAGCCAGTGCCTTTACGCATTTGCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS GCA 90 bp | CCCAGACCCCGTCAAGTTGAACCAGCTGTTAAATTCTTTGCCATTTaGCCATTTCCATGTCTGATTAGCTTCATTTTTCAGCCCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: PRPRQVEPAVKFFAI*PFPCLISFIFQPNP Trigger: TGGATTGGGCTGAAAAATGAAGCTAATCAGACATGGAAATGGGCAAATGGCAAAGAATTTAACAGCTGGTTCAACTTGACGGGGTCTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTCCTCATGTCCCACAGTTCTATCTGGAGTTGATCCAGGATGATGTAAAGCCAAGGGATAGAAACTaGAATGGATCCTTCATGATG | + |
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Preference number: 5 (lower is better) Translates to: LLPHVPQFYLELIQDDVKPRDRN*NGSFMM Trigger: CATCATGAAGGATCCATTCAAGTTTCTATCCCTTGG...CTTTACATCATCCTGGATCAACTCCAGATAGAACTGTGGGACATGAGGAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS-3UTR CAA 90 bp | AAGGCCACTCTTATTCTTTGGGGGAGAACAATTGACAAAATAATGAGGCAAAGTAGGCCCAACTCTTGGTaGTGGTGGAGAAGAAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: KATLILWGRTIDKIMRQSRPNSW*WWRRSN Trigger: GTTACTTCTTCTCCACCACAACCAAGAGTTGGGCCT...ACTTTGCCTCATTATTTTGTCAATTGTTCTCCCCCAAAGAATAAGAGTGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS TCA 90 bp | TTGAACCAGCTGTTAAATTCTTTGCCATTTGCCCATTTCCATGTCTaGTTAGCTTCATTTTTCAGCCCAATCCAATGTTCCAGTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: LNQLLNSLPFAHFHV*LASFFSPIQCSSSP Trigger: TGGTGAACTGGAACATTGGATTGGGCTGAAAAATGAAGCTAATCAGACATGGAAATGGGCAAATGGCAAAGAATTTAACAGCTGGTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGTTGGTTTGTGCAGTCTTTGTGGAAAATTCAACTGCAGAGCAGTATCCACAGCTGTTAAATTCTTaGCCATTTGCCCATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VKLVCAVFVENSTAEQYPQLLNS*PFAHFH Trigger: ATGGAAATGGGCAAATGGCAAAGAATTTAACAGCTG...TGGATACTGCTCTGCAGTTGAATTTTCCACAAAGACTGCACAAACCAACTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS GCA 72 bp | ATTCCAACTTCTCGTACAAGCCTGGGCAATTGTACTTaGCCACCTTCTGCCCTCTCTCCAGATGTGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: IPTSRTSLGNCT*PPSALSPDVKS Trigger: GCTCTTCACATCTGGAGAGAGGGCAGAAGGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204411.2 |
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| CDS CAA 72 bp | TGGTTCACGGACACGCACCTCCCAGACCCCGTCAAGTaGAACCAGCTGTTAAATTCTTTGCCATTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: WFTDTHLPDPVK*NQLLNSLPFAH Trigger: ATGGGCAAATGGCAAAGAATTTAACAGCTGGTTCAACTTGACGGGGTCTGGGAGGTGCGTGTCCGTGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CAA 90 bp | ACATGGTGGTCAGATGATTCCAACTTCTCGTACAAGCCTGGGCAATaGTACTTGCCCACCTTCTGCCCTCTCTCCAGATGTGAAGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: TWWSDDSNFSYKPGQ*YLPTFCPLSRCEEL Trigger: TAGCTCTTCACATCTGGAGAGAGGGCAGAAGGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCACCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204411.2 |
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| CDS GCA 72 bp | TCGTACAAGCCTGGGCAATTGTACTTGCCCACCTTCTaGCCTCTCTCCAGATGTGAAGAGCTATTTTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SYKPGQLYLPTF*PLSRCEELFSV Trigger: AACGGAAAATAGCTCTTCACATCTGGAGAGAGGGCAGAAGGTGGGCAAGTACAATTGCCCAGGCTTGTACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204411.2 |
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| CDS CCA 72 bp | CTTCAGAACAAGAGCGTTGGGCCAAGGCCCAACTCTTaGTTGTGGTGGAGAAGAAGTAACATGTCCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LQNKSVGPRPNS*LWWRRSNMSSC Trigger: ACAAGAGGACATGTTACTTCTTCTCCACCACAACCAAGAGTTGGGCCTTGGCCCAACGCTCTTGTTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CAA 72 bp | TCAGATGATTCCAACTTCTCGTACAAGCCTGGGCAATaGTACTTGCCCACCTTCTGCCCTCTCTCCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: SDDSNFSYKPGQ*YLPTFCPLSRC Trigger: ACATCTGGAGAGAGGGCAGAAGGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204411.2 |
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| CDS CAA 90 bp | TGGTCAGATGATTCCAACTTCTCGTACAAGCCTGGGCAATTGTACTaGCCCACCTTCTGCCCTCTCTCCAGATGTGAAGAGCTATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WSDDSNFSYKPGQLY*PTFCPLSRCEELFS Trigger: GGAAAATAGCTCTTCACATCTGGAGAGAGGGCAGAAGGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204411.2 |
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| CDS CCA 72 bp | AAGAGCGTTGGGCCAAGGCCCAACTCTTGGTTGTGGTaGAGAAGAAGTAACATGTCCTCTTGTATGAAATCC | + |
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Preference number: 6 (lower is better) Translates to: KSVGPRPNSWLW*RRSNMSSCMKS Trigger: GGATTTCATACAAGAGGACATGTTACTTCTTCTCCACCACAACCAAGAGTTGGGCCTTGGCCCAACGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CAA 90 bp | ACATTTTTGTGGTTCACGGACACGCACCTCCCAGACCCCGTCAAGTaGAACCAGCTGTTAAATTCTTTGCCATTTGCCCATTTCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: TFLWFTDTHLPDPVK*NQLLNSLPFAHFHV Trigger: GACATGGAAATGGGCAAATGGCAAAGAATTTAACAGCTGGTTCAACTTGACGGGGTCTGGGAGGTGCGTGTCCGTGAACCACAAAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS TCA 72 bp | CCACTCATTCTTGCAGGTAGCAACATGGTGGTCAGATaGTTCCAACTTCTCGTACAAGCCTGGGCAATTGTA | + |
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Preference number: 6 (lower is better) Translates to: PLILAGSNMVVR*FQLLVQAWAIV Trigger: TACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCACCATGTTGCTACCTGCAAGAATGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CCA 72 bp | GAATGGATCCTTCATGATGCTTCTCAAAATGTATACTaGTGCCATGGTCCTTCTGCCCTCTCTCCAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: EWILHDASQNVY*CHGPSALSPDV Trigger: CACATCTGGAGAGAGGGCAGAAGGACCATGGCACCAGTATACATTTTGAGAAGCATCATGAAGGATCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS CCA 72 bp | AACAAGAGCGTTGGGCCAAGGCCCAACTCTTGGTTGTaGTGGAGAAGAAGTAACATGTCCTCTTGTATGAAA | + |
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Preference number: 6 (lower is better) Translates to: NKSVGPRPNSWL*WRRSNMSSCMK Trigger: TTTCATACAAGAGGACATGTTACTTCTTCTCCACCACAACCAAGAGTTGGGCCTTGGCCCAACGCTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS TCA 72 bp | ACTGGTGCCATGGTCCTTCTGCCCTCTCTCCAGATGTaGAGAGCTATTTTCCGTTATAGAACAGTTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TGAMVLLPSLQM*RAIFRYRTVFR Trigger: TCTGAAAACTGTTCTATAACGGAAAATAGCTCTTCACATCTGGAGAGAGGGCAGAAGGACCATGGCACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS CCA 72 bp | TATGAAATCCACTCATTCTTGCAGGTAGCAACATGGTaGTCAGATGATTCCAACTTCTCGTACAAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: YEIHSFLQVATW*SDDSNFSYKPG Trigger: CCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCACCATGTTGCTACCTGCAAGAATGAGTGGATTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CAA 90 bp | TGGTCAGATGATTCCAACTTCTCGTACAAGCCTGGGCAATTGTACTaGCCCACATTTAAGGCAATGAGAGCTATTATTAAGGACGTGATG | + |
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Preference number: 6 (lower is better) Translates to: WSDDSNFSYKPGQLY*PTFKAMRAIIKDVM Trigger: CATCACGTCCTTAATAATAGCTCTCATTGCCTTAAATGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS CAA 90 bp | ACATGGTGGTCAGATGATTCCAACTTCTCGTACAAGCCTGGGCAATaGTACTTGCCCACATTTAAGGCAATGAGAGCTATTATTAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TWWSDDSNFSYKPGQ*YLPTFKAMRAIIKD Trigger: GTCCTTAATAATAGCTCTCATTGCCTTAAATGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATCATCTGACCACCATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS CCA 72 bp | TTGTATGAAATCCACTCATTCTTGCAGGTAGCAACATaGTGGTCAGATGATTCCAACTTCTCGTACAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LYEIHSFLQVAT*WSDDSNFSYKP Trigger: AGGCTTGTACGAGAAGTTGGAATCATCTGACCACCATGTTGCTACCTGCAAGAATGAGTGGATTTCATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS CAA 72 bp | GATTCCAACTTCTCGTACAAGCCTGGGCAATTGTACTaGCCCACATTTAAGGCAATGAGAGCTATTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: DSNFSYKPGQLY*PTFKAMRAIIK Trigger: CTTAATAATAGCTCTCATTGCCTTAAATGTGGGCAAGTACAATTGCCCAGGCTTGTACGAGAAGTTGGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032259.6 |
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| CDS TCA 72 bp | ACCAGAATATCGCTTCAGAAACGTCATGTCCTTTTCTaGATCAATTACAGCAAGAGTAGCAGCATCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TRISLQKRHVLF*INYSKSSSIFR Trigger: TCTGAAGATGCTGCTACTCTTGCTGTAATTGATTCAGAAAAGGACATGACGTTTCTGAAGCGATATTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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| CDS TCA 72 bp | CTGTTAAATTCTTTGCCATTTGCCCATTTCCATGTCTaGTTAGCTTCATTTTTCAGCCCAATCCAATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLNSLPFAHFHV*LASFFSPIQCS Trigger: GGAACATTGGATTGGGCTGAAAAATGAAGCTAATCAGACATGGAAATGGGCAAATGGCAAAGAATTTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032259.6 ENSMUST00000204411.2 |
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