Pregenerated sensors for CD6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024670

Ensembl transcript IDs: ENSMUST00000039043.15, ENSMUST00000080292.12, ENSMUST00000174176.3

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATGGGTaGAGGATGAGGGGCTGGGAGAATGCCCACCCTTCCACCTCTGCT	+
Preference number: 1 (lower is better) Translates to: LALSSVPGSCRLING*RMRGWENAHPSTSA Trigger: AGCAGAGGTGGAAGGGTGGGCATTCTCCCAGCCCCTCATCCTCCACCCATTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 90 bp	ACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATaGGTGGAGGATGAGGGGCTGGGAGAATGCCCACCCTTCCACCTC	+
Preference number: 1 (lower is better) Translates to: TTGFVFCSGLLQVNQ*VEDEGLGECPPFHL Trigger: GAGGTGGAAGGGTGGGCATTCTCCCAGCCCCTCATCCTCCACCCATTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR TCA 90 bp	TTCAGCAGCTTCCTGAGGCTTAGGATCAAAGTGCCAGACACGGAGTaGGATAAGGCCTCAGGGTCACCCAGCATGACCCTTCACCACTCC	+
Preference number: 1 (lower is better) Translates to: FSSFLRLRIKVPDTE*DKASGSPSMTLHHS Trigger: GGAGTGGTGAAGGGTCATGCTGGGTGACCCTGAGGCCTTATCTCACTCCGTGTCTGGCACTTTGATCCTAAGCCTCAGGAAGCTGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR TCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGGGCTGTGGATCCCCTaGCTCAGGCAGGGCAGGGAT	+
Preference number: 2 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRGLWIP*LRQGRD Trigger: ATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR GCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGAGGGGCTGGGAGAATaGCCACCCTTCCACCTCTGC	+
Preference number: 2 (lower is better) Translates to: SLAGTLQFSDAVGRTCLREGLGE*PPFHLC Trigger: GCAGAGGTGGAAGGGTGGGCATTCTCCCAGCCCCTC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR TCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTATGGTTACTCTTAGGTaGCAGTGCCCAGGGAGGCCA	+
Preference number: 2 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSMVTLR*QCPGRP Trigger: TGGCCTCCCTGGGCACTGTCACCTAAGAGTAACCAT...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR GCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGAGGGGCTGGGAGAATaGCCACCCTTCCACCTCTGC	+
Preference number: 2 (lower is better) Translates to: PGCIETSLTSWVIMAAPGEGLGE*PPFHLC Trigger: GCAGAGGTGGAAGGGTGGGCATTCTCCCAGCCCCTC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGATAATGGCAGCCCCTaGCCCAGGGCCTGTATTTCA	+
Preference number: 2 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRDNGSP*PRACIS Trigger: TGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTAGGTTAATCAATGGGTaGAGGATGAGGGGCTGGGAG	+
Preference number: 2 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSRLING*RMRGWE Trigger: CTCCCAGCCCCTCATCCTCCACCCATTGATTAACCT...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTATTTCAGCAGTGGGTaGGCTACTCAGCCCCTTCAG	+
Preference number: 2 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRYFSSG*ATQPLQ Trigger: CTGAAGGGGCTGAGTAGCCCACCCACTGCTGAAATA...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR GCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATTCTGTTCCGGGCTCCTaGAGGTTAATCAATGGGTGG	+
Preference number: 2 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYSVPGS*RLINGW Trigger: CCACCCATTGATTAACCTGCAGGAGCCCGGAACAGA...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR GCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTTCTGTTCCGGGCTCCTaGAGGTTAATCAATGGGTGG	+
Preference number: 2 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSSVPGS*RLINGW Trigger: CCACCCATTGATTAACCTGCAGGAGCCCGGAACAGA...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGACCACTCCCAAGAAGTaGCCAGACCCTGTTTGTTCA	+
Preference number: 2 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRTTPKK*PDPVCS Trigger: TGAACAAACAGGGTCTGGCCACTTCTTGGGAGTGGT...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CAA 90 bp	CCCAGCATGACCCTTCACCACTCCCAAGAAGTGGCCAGACCCTGTTaGTTCAACCCAGGACTCAGCTCTCACACCACTGGCTTTGTCTTC	+
Preference number: 2 (lower is better) Translates to: PSMTLHHSQEVARPC*FNPGLSSHTTGFVF Trigger: GAAGACAAAGCCAGTGGTGTGAGAGCTGAGTCCTGGGTTGAACAAACAGGGTCTGGCCACTTCTTGGGAGTGGTGAAGGGTCATGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTACCACTCCCAAGAAGTaGCCAGACCCTGTTTGTTCA	+
Preference number: 2 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSTTPKK*PDPVCS Trigger: TGAACAAACAGGGTCTGGCCACTTCTTGGGAGTGGT...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CAA 90 bp	GACCCTGTTTGTTCAACCCAGGACTCAGCTCTCACACCACTGGCTTaGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATGGGTGGAGG	+
Preference number: 2 (lower is better) Translates to: DPVCSTQDSALTPLA*SSVPGSCRLINGWR Trigger: CCTCCACCCATTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCTGAGTCCTGGGTTGAACAAACAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCCTTCAGCAGCTTCCTaGGGCTTAGGATCAAAGTGC	+
Preference number: 2 (lower is better) Translates to: PGCIETSLTSWVIMAAPGPSAAS*GLGSKC Trigger: GCACTTTGATCCTAAGCCTCAGGAAGCTGCTGAAGG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCAGCTCTCACACCACTaGCTTTGTCTTCTGTTCCGG	+
Preference number: 2 (lower is better) Translates to: PGCIETSLTSWVIMAAPGQLSHH*LCLLFR Trigger: CCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCTG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 72 bp	AGCCCTCCAGAACAGGTCCCTGCATTCTTGTCCCAATaGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGG	+
Preference number: 3 (lower is better) Translates to: SPPEQVPAFLSQ*GCGSPDSGRAG Trigger: CCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAATGCAGGGACCTGTTCTGGAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 72 bp	TCCTGCAGGTTAATCAATGGGTGGAGGATGAGGGGCTaGGAGAATGCCCACCCTTCCACCTCTGCTAGGGGC	+
Preference number: 3 (lower is better) Translates to: SCRLINGWRMRG*ENAHPSTSARG Trigger: GCCCCTAGCAGAGGTGGAAGGGTGGGCATTCTCCCAGCCCCTCATCCTCCACCCATTGATTAACCTGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 72 bp	GACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTaGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTA	+
Preference number: 3 (lower is better) Translates to: DIADFLGDNGSP*PRACISAVGGL Trigger: TAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 72 bp	GAGGCCCCAGGTTGTATTGAGACATCGCTGACTTCCTaGGTGATAATGGCAGCCCCTGGCCCAGGGCCTGTA	+
Preference number: 3 (lower is better) Translates to: EAPGCIETSLTS*VIMAAPGPGPV Trigger: TACAGGCCCTGGGCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGGGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR TCA 72 bp	CAGTGGGTGGGCTACTCAGCCCCTTCAGCAGCTTCCTaGGGCTTAGGATCAAAGTGCCAGACACGGAGTGAG	+
Preference number: 3 (lower is better) Translates to: QWVGYSAPSAAS*GLGSKCQTRSE Trigger: CTCACTCCGTGTCTGGCACTTTGATCCTAAGCCTCAGGAAGCTGCTGAAGGGGCTGAGTAGCCCACCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR GCA 72 bp	CTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTaGAGGTTAATCAATGGGTGGAGGATGAGGGGCTGG	+
Preference number: 3 (lower is better) Translates to: LTPLALSSVPGS*RLINGWRMRGW Trigger: CCAGCCCCTCATCCTCCACCCATTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CCA 72 bp	TTTAATCTCTGGAACTCAGGACAGGCCACTGTAGCCTaGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGA	+
Preference number: 3 (lower is better) Translates to: FNLWNSGQATVA*LGPSSSLTLWG Trigger: TCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCTACAGTGGCCTGTCCTGAGTTCCAGAGATTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR TCA 72 bp	TTCCTGAGGCTTAGGATCAAAGTGCCAGACACGGAGTaGGATAAGGCCTCAGGGTCACCCAGCATGACCCTT	+
Preference number: 3 (lower is better) Translates to: FLRLRIKVPDTE*DKASGSPSMTL Trigger: AAGGGTCATGCTGGGTGACCCTGAGGCCTTATCTCACTCCGTGTCTGGCACTTTGATCCTAAGCCTCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCACCGTCCAGGGAGTGTaGCAGCCCCCTGGGCCGAGC	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLTVQGV*QPPGPS Trigger: GCTCGGCCCAGGGGGCTGCCACACTCCCTGGACGGT...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTGGCCTGGGGTGAAGTaGAAGCCGGCCAGCGCCTTC	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRWPGVK*KPASAF Trigger: GAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCA...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTGGCCTGGGGTGAAGTaGAAGCCGGCCAGCGCCTTC	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSWPGVK*KPASAF Trigger: GAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCA...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCCTGAGCAGACAACCCTaGCTGCCCGCGACTGGCTGC	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLLSRQP*LPATGC Trigger: GCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAG...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCGGTTCTCTGCACAGGTaGCCCACACCAGCCGCCTGT	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLGSLHR*PTPAAC Trigger: ACAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACC...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTGCAGACAACCCTGGCTaGCCGCGACTGGCTGCACAG	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSADNPG*PRLAAQ Trigger: CTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGC...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCCCGAGAGGGGACATCTaGCACACAGGGTCTGGGGTC	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLPRGDI*HTGSGV Trigger: GACCCCAGACCCTGTGTGGCAGATGTCCCCTCTCGG...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCCCGAGAGGGGACATCTaGCACACAGGGTCTGGGGTC	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLPRGDI*HTGSGV Trigger: GACCCCAGACCCTGTGTGGCAGATGTCCCCTCTCGG...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCACTGGAGTCCGAGTCTaGAGGGACCCGGGGCTGGAT	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLTGVRV*RDPGLD Trigger: ATCCAGCCCCGGGTCCCTGCAGACTCGGACTCCAGT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGCCTGCATCTCTCAGTTaGTGCCCGCGCCCACGTCGT	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRPASLS*CPRPRR Trigger: ACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGG...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCCCTGCATCTCTCAGTTaGTGCCCGCGCCCACGTCGT	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLPASLS*CPRPRR Trigger: ACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGG...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCACAGTACTGGTCTCCTaGCCGTCCCGGGCAGTCCCA	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLTVLVS*PSRAVP Trigger: TGGGACTGCCCGGGACGGCCAGGAGACCAGTACTGT...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATAGTGTGGCAGCCCCCTaGGCCGAGCCACTGCTGATC	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYSVAAP*AEPLLI Trigger: GATCAGCAGTGGCTCGGCCCAGGGGGCTGCCACACT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCCTGGCTGCCCGCGACTaGCTGCACAGGTTGGAGTTG	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLLAARD*LHRLEL Trigger: CAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAG...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATCTGAGCAGACAACCCTaGCTGCCCGCGACTGGCTGC	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYLSRQP*LPATGC Trigger: GCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAG...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCTGCCACACAGGGTCTaGGGTCAGCCGCTGGGATGT	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSLPHRV*GQPLGC Trigger: ACATCCCAGCGGCTGACCCCAGACCCTGTGTGGCAG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCGCTGTCACACACCGTaGTCCAGACACCCCGGAAGT	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSRCHTP*SRHPGS Trigger: ACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAGCG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCCCAGAAGTGGCTCCTaGTGGAAGCTCAGAGGTGGG	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSPRSGS*WKLRGG Trigger: CCCACCTCTGAGCTTCCACCAGGAGCCACTTCTGGG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCGTCAGGCGCCAGGACTaGTGCTCTGAGCACACCACT	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLVRRQD*CSEHTT Trigger: AGTGGTGTGCTCAGAGCACCAGTCCTGGCGCCTGAC...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATCTGCCACACAGGGTCTaGGGTCAGCCGCTGGGATGT	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYLPHRV*GQPLGC Trigger: ACATCCCAGCGGCTGACCCCAGACCCTGTGTGGCAG...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CAA 72 bp	TGTCAACCCAAGGGGACCTGTGGGGACTCGGAGCTTTaGGTGCCCTCTAGCCCTCCAGAACAGGTCCCTGCA	+
Preference number: 4 (lower is better) Translates to: CQPKGTCGDSEL*VPSSPPEQVPA Trigger: TGCAGGGACCTGTTCTGGAGGGCTAGAGGGCACCAAAAGCTCCGAGTCCCCACAGGTCCCCTTGGGTTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTCCAGAGCAGTTCACCTaGTCGCGGTGGATGGGTCCT	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSPEQFT*SRWMGP Trigger: AGGACCCATCCACCGCGATCAGGTGAACTGCTCTGG...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGCCAGGAACAGGTGCTaGGGGCGGGCTCCTGTCCTT	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGARNRC*GRAPVL Trigger: AAGGACAGGAGCCCGCCCTCAGCACCTGTTCCTGGC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATATGTCTCTGGGAGCCTaGGCAGACAACCCTGGCTGC	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYMSLGA*ADNPGC Trigger: GCAGCCAGGGTTGTCTGCTCAGGCTCCCAGAGACAT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATCGCTGTCACACACCGTaGTCCAGACACCCCGGAAGT	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYRCHTP*SRHPGS Trigger: ACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAGCG...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGCAGACAACCCTGGCTaGCCGCGACTGGCTGCACAG	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGADNPG*PRLAAQ Trigger: CTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCACTCTCCGGATGAGGTaGTGGAGCTGTCATCGGCTG	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLTLRMR*WSCHRL Trigger: CAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATGTCAGGCGCCAGGACTaGTGCTCTGAGCACACCACT	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYVRRQD*CSEHTT Trigger: AGTGGTGTGCTCAGAGCACCAGTCCTGGCGCCTGAC...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATCGCCTGGGAATTCCATaGAGGTGGCTTGCTGCTGGG	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYRLGIP*RWLAAG Trigger: CCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCG...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTCTGCTGGAGGATGCTaGGGTGGTGGCTGGAAGTTC	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSSAGGC*GGGWKF Trigger: GAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGA...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGGTTCTCTGCACAGGTaGCCCACACCAGCCGCCTGT	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGGSLHR*PTPAAC Trigger: ACAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCCCTGGTCCTGCACCTTaGAGAACTGCCAATTGGCTC	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLPGPAP*RTANWL Trigger: GAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGG...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTGTACCCCATTCACCATaGTCCAGCATCTCCACTCGG	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSVPHSP*SSISTR Trigger: CCGAGTGGAGATGCTGGAGCATGGTGAATGGGGTAC...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATACTCTCCGGATGAGGTaGTGGAGCTGTCATCGGCTG	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYTLRMR*WSCHRL Trigger: CAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCGTGCCATTTTTGTGCTaGCCAGAGGGGGCTGGAGAT	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLVPFLC*PEGAGD Trigger: ATCTCCAGCCCCCTCTGGCCAGCACAAAAATGGCAC...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCTGGCTGCCCGCGACTaGCTGCACAGGTTGGAGTTG	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGLAARD*LHRLEL Trigger: CAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGGTGGCTGGAAGTTCTaGTACCACTCTCCGGATGAG	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRGGWKF*YHSPDE Trigger: CTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTGCTGGGGTGGTGGCTaGAAGTTCTGGTACCACTCT	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLCWGGG*KFWYHS Trigger: AGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCA...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCAGGATGCTGGGGTGGTaGCTGGAAGTTCTGGTACCA	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLRMLGW*LEVLVP Trigger: TGGTACCAGAACTTCCAGCCACCACCCCAGCATCCT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTGGAGGATGCTGGGGTaGTGGCTGGAAGTTCTGGTA	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSWRMLG*WLEVLV Trigger: TACCAGAACTTCCAGCCACCACCCCAGCATCCTCCA...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATTCTGCTGGAGGATGCTaGGGTGGTGGCTGGAAGTTC	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYSAGGC*GGGWKF Trigger: GAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGA...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTTCAATGGAGTCTGTTTaGGGGCCAGGGGGTCCTGGA	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSSMESV*GPGGPG Trigger: TCCAGGACCCCCTGGCCCCCAAACAGACTCCATTGA...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCCAGAGCAGTTCACCTaGTCGCGGTGGATGGGTCCT	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGPEQFT*SRWMGP Trigger: AGGACCCATCCACCGCGATCAGGTGAACTGCTCTGG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTACAGGTTGGAGTTGTTaGACCGCCAGGAACAGGTGC	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSTGWSC*TARNRC Trigger: GCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGT...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCATGTCTCTGGGAGCCTaGGCAGACAACCCTGGCTGC	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGMSLGA*ADNPGC Trigger: GCAGCCAGGGTTGTCTGCTCAGGCTCCCAGAGACAT...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCAGGTGGCTGGGAGCTaGAGTCATAGTGCTCATAGT	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSQVAGS*SHSAHS Trigger: ACTATGAGCACTATGACTTCAGCTCCCAGCCACCTG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGCTACACTCCTGGTCCTaGACCTTGCAGAACTGCCAA	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRLHSWS*TLQNCQ Trigger: TTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAG...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCTACACTCCTGGTCCTaGACCTTGCAGAACTGCCAA	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSLHSWS*TLQNCQ Trigger: TTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATGTACCCCATTCACCATaGTCCAGCATCTCCACTCGG	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYVPHSP*SSISTR Trigger: CCGAGTGGAGATGCTGGAGCATGGTGAATGGGGTAC...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCTTCGCAGGAGTCAATaGCTCCAGTCAGGCGCCAGG	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGLRRSQ*LQSGAR Trigger: CCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTTGTGTTCCCAGAAGTaGCTCCTGGTGGAAGCTCAG	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSLCSQK*LLVEAQ Trigger: CTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAA...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCTTGTGTTCCCAGAAGTaGCTCCTGGTGGAAGCTCAG	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLLCSQK*LLVEAQ Trigger: CTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAA...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTGCAGAACTGCCAATTaGCTCCCCTGCATCTCTCAG	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRCRTAN*LPCISQ Trigger: CTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCA...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTGCAGAACTGCCAATTaGCTCCCCTGCATCTCTCAG	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSCRTAN*LPCISQ Trigger: CTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCA...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGACCGACAGAGCACTTTaGCCTCAGATGGGTACCACT	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRTDRAL*PQMGTT Trigger: AGTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGT...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGCAGTAGACAGTTGCTaGTGGTTCACTGAAGCAGGG	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRAVDSC*WFTEAG Trigger: CCCTGCTTCAGTGAACCACCAGCAACTGTCTACTGC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCGCAGTAGACAGTTGCTaGTGGTTCACTGAAGCAGGG	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLAVDSC*WFTEAG Trigger: CCCTGCTTCAGTGAACCACCAGCAACTGTCTACTGC...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCGTGACCCGGTGTCGCTaGGAATCTTCTTTGGCAATG	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLVTRCR*ESSLAM Trigger: CATTGCCAAAGAAGATTCCCAGCGACACCGGGTCAC...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039043.15
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCTCCGGATGAGGTGCTaGAGCTGTCATCGGCTGAGG	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGLRMRC*SCHRLR Trigger: CCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTAGGATGCTGGGGTGGTaGCTGGAAGTTCTGGTACCA	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSRMLGW*LEVLVP Trigger: TGGTACCAGAACTTCCAGCCACCACCCCAGCATCCT...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCAAGTGTCAGCCCTTGTaGGTCCTTATCCTTCACGCT	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLKCQPL*VLILHA Trigger: AGCGTGAAGGATAAGGACTCACAAGGGCTGACACTT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCGGGATGTGGGAAACATaGAGCTCTTCAAGTCCTTCC	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLGMWET*SSSSPS Trigger: GGAAGGACTTGAAGAGCTGCATGTTTCCCACATCCC...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCAAGCTCAGAGGTGGGTaGCATCAGGTAGGTAACCTT	+
Preference number: 4 (lower is better) Translates to: DNGSPWPRACISAVGGLLKLRGG*HQVGNL Trigger: AAGGTTACCTACCTGATGCCACCCACCTCTGAGCTT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAACAGTACTGGTCTCCTaGCCGTCCCGGGCAGTCCCA	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQTVLVS*PSRAVP Trigger: TGGGACTGCCCGGGACGGCCAGGAGACCAGTACTGT...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCAACCGTCCAGGGAGTGTaGCAGCCCCCTGGGCCGAGC	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSTVQGV*QPPGPS Trigger: GCTCGGCCCAGGGGGCTGCCACACTCCCTGGACGGT...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGGAATTCCATGGAGGTaGCTTGCTGCTGGGATCATT	+
Preference number: 4 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRGIPWR*LAAGII Trigger: AATGATCCCAGCAGCAAGCCACCTCCATGGAATTCC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATTTCAAACTGTTCTGCTaGAGGATGCTGGGGTGGTGG	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYFKLFC*RMLGWW Trigger: CCACCACCCCAGCATCCTCCAGCAGAACAGTTTGAA...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGGTCAGGGCCACAGGTaGCTGGGAGCTGAAGTCATA	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGGQGHR*LGAEVI Trigger: TATGACTTCAGCTCCCAGCCACCTGTGGCCCTGACC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
3UTR CAA 72 bp	ACCCTTCACCACTCCCAAGAAGTGGCCAGACCCTGTTaGTTCAACCCAGGACTCAGCTCTCACACCACTGGC	+
Preference number: 4 (lower is better) Translates to: TLHHSQEVARPC*FNPGLSSHTTG Trigger: GCCAGTGGTGTGAGAGCTGAGTCCTGGGTTGAACAAACAGGGTCTGGCCACTTCTTGGGAGTGGTGAAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCACAGGTTGGAGTTGTTaGACCGCCAGGAACAGGTGC	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGTGWSC*TARNRC Trigger: GCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGT...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTCAGAAGATTCTATCGTaGCTGGAACTCTGGAAGGCA	+
Preference number: 4 (lower is better) Translates to: SCPNGAVDPLTQAGQGCSQKILS*LELWKA Trigger: TGCCTTCCAGAGTTCCAGTCACGATAGAATCTTCTG...AGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATAAGTGTCAGCCCTTGTaGGTCCTTATCCTTCACGCT	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYKCQPL*VLILHA Trigger: AGCGTGAAGGATAAGGACTCACAAGGGCTGACACTT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCGGACAATACAGAGAATaGGAAGTGTCAGCCCTTGTG	+
Preference number: 4 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLGQYRE*EVSALV Trigger: CACAAGGGCTGACACTTCTCATTCTCTGTATTGTCC...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAGAGCTTCCTCCTCTGTaGCCCGGTGTCGCTGGGAAT	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQELPPL*PGVAGN Trigger: ATTCCCAGCGACACCGGGTCACAGAGGAGGAAGCTC...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAACTTCGCAGGAGTCAATaGCTCCAGTCAGGCGCCAGG	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQLRRSQ*LQSGAR Trigger: CCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAG...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATAAGCTCAGAGGTGGGTaGCATCAGGTAGGTAACCTT	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYKLRGG*HQVGNL Trigger: AAGGTTACCTACCTGATGCCACCCACCTCTGAGCTT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTCCTCAGAGGAGGTGCTaGAATCACTGTTGTTCCTCA	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSPQRRC*NHCCSS Trigger: TGAGGAACAACAGTGATTCCAGCACCTCCTCTGAGG...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCTGGAGGATGCTGGGGTaGTGGCTGGAAGTTCTGGTA	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGWRMLG*WLEVLV Trigger: TACCAGAACTTCCAGCCACCACCCCAGCATCCTCCA...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGGGAATTGTAGAAGGTaGTCAGGGCCACAGGTGGCT	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGGNCRR*SGPQVA Trigger: AGCCACCTGTGGCCCTGACCACCTTCTACAATTCCC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCAGCCAGGAACAGGTGCTaGGGGCGGGCTCCTGTCCTT	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSARNRC*GRAPVL Trigger: AAGGACAGGAGCCCGCCCTCAGCACCTGTTCCTGGC...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTCAGAAGATTCTATCGTaGCTGGAACTCTGGAAGGCA	+
Preference number: 4 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSQKILS*LELWKA Trigger: TGCCTTCCAGAGTTCCAGTCACGATAGAATCTTCTG...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATGGACAATACAGAGAATaGGAAGTGTCAGCCCTTGTG	+
Preference number: 4 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYGQYRE*EVSALV Trigger: CACAAGGGCTGACACTTCTCATTCTCTGTATTGTCC...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATCAATGGAGTCTGTTTaGGGGCCAGGGGGTCCTGGA	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQSMESV*GPGGPG Trigger: TCCAGGACCCCCTGGCCCCCAAACAGACTCCATTGA...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAACACTGCTTGGTTCTCTaGACAGGTGACCCACACCAG	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQHCLVL*TGDPHQ Trigger: CTGGTGTGGGTCACCTGTGCAGAGAACCAAGCAGTG...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGGGATGTGGGAAACATaGAGCTCTTCAAGTCCTTCC	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGGMWET*SSSSPS Trigger: GGAAGGACTTGAAGAGCTGCATGTTTCCCACATCCC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCGGAATTCCATGGAGGTaGCTTGCTGCTGGGATCATT	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGGIPWR*LAAGII Trigger: AATGATCCCAGCAGCAAGCCACCTCCATGGAATTCC...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATGCTGGGGTGGTGGCTaGAAGTTCTGGTACCACTCT	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQCWGGG*KFWYHS Trigger: AGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCA...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCAGAGCTTCCTCCTCTGTaGCCCGGTGTCGCTGGGAAT	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSELPPL*PGVAGN Trigger: ATTCCCAGCGACACCGGGTCACAGAGGAGGAAGCTC...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCTTGGCAGTAGACAGTTaGTGGTGGTTCACTGAAGCA	+
Preference number: 4 (lower is better) Translates to: PGCIETSLTSWVIMAAPGLAVDS*WWFTEA Trigger: TGCTTCAGTGAACCACCAGCAACTGTCTACTGCCAA...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCACGCCTGGGAATTCCATaGAGGTGGCTTGCTGCTGGG	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSRLGIP*RWLAAG Trigger: CCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCG...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCACTCCGGATGAGGTGCTaGAGCTGTCATCGGCTGAGG	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSLRMRC*SCHRLR Trigger: CCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAG...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATTCAAACTGTTCTGCTaGAGGATGCTGGGGTGGTGG	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQFKLFC*RMLGWW Trigger: CCACCACCCCAGCATCCTCCAGCAGAACAGTTTGAA...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR TCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCACCTGCGTCCTCCTTGTaGCCACAGTACTGGTCTCCT	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSPASSL*PQYWSP Trigger: AGGAGACCAGTACTGTGGTCACAAGGAGGACGCAGG...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
3UTR CAA 72 bp	TGTTCAACCCAGGACTCAGCTCTCACACCACTGGCTTaGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAT	+
Preference number: 4 (lower is better) Translates to: CSTQDSALTPLA*SSVPGSCRLIN Trigger: ATTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCTGAGTCCTGGGTTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCACCTGGTCCTGCACCTTaGAGAACTGCCAATTGGCTC	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSPGPAP*RTANWL Trigger: GAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGG...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR GCA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATTGGCAGTAGACAGTTaGTGGTGGTTCACTGAAGCA	+
Preference number: 4 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQLAVDS*WWFTEA Trigger: TGCTTCAGTGAACCACCAGCAACTGTCTACTGCCAA...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CCA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCAGTGCCATTTTTGTGCTaGCCAGAGGGGGCTGGAGAT	+
Preference number: 4 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSVPFLC*PEGAGD Trigger: ATCTCCAGCCCCCTCTGGCCAGCACAAAAATGGCAC...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 90 bp	CGCCAGGACTGGTGCTCTGAGCACACCACTCCTGCGTCCTCCTTGTaGCCACAGTACTGGTCTCCTGGCCGTCCCGGGCAGTCCCACAGG	+
Preference number: 5 (lower is better) Translates to: RQDWCSEHTTPASSL*PQYWSPGRPGQSHR Trigger: CCTGTGGGACTGCCCGGGACGGCCAGGAGACCAGTACTGTGGTCACAAGGAGGACGCAGGAGTGGTGTGCTCAGAGCACCAGTCCTGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	AGTCCCAGAGCAGTTCACCTGATCGCGGTGGATGGGTCCTTGGCCTaGGGTGAAGTGCAAGCCGGCCAGCGCCTTCACTGCCCAGCCGCA	+
Preference number: 5 (lower is better) Translates to: SPRAVHLIAVDGSLA*GEVQAGQRLHCPAA Trigger: TGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGAACTGCTCTGGGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS TCA 90 bp	CAGAGCAGTTCACCTGATCGCGGTGGATGGGTCCTTGGCCTGGGGTaGAGTGCAAGCCGGCCAGCGCCTTCACTGCCCAGCCGCACTTCA	+
Preference number: 5 (lower is better) Translates to: QSSSPDRGGWVLGLG*SASRPAPSLPSRTS Trigger: TGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGAACTGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	AGCCGCCTGTCGCTGCTACACTCCTGGTCCTGCACCTTGCAGAACTaGCAATTGGCTCCCCTGCATCTCTCAGTTGGTGCCCGCGCCCAC	+
Preference number: 5 (lower is better) Translates to: SRLSLLHSWSCTLQN*QLAPLHLSVGARAH Trigger: GTGGGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	CACACACAGGCTCCCAGGACTCCAGTAGAACCTTCACAGATCCGCTaGAGCGACTGCTCCCGTTCACCAGGCGAATCCCCAGCCGCTCCT	+
Preference number: 5 (lower is better) Translates to: HTQAPRTPVEPSQIR*SDCSRSPGESPAAP Trigger: AGGAGCGGCTGGGGATTCGCCTGGTGAACGGGAGCAGTCGCTGCAGCGGATCTGTGAAGGTTCTACTGGAGTCCTGGGAGCCTGTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	GGGTCCTTGGCCTGGGGTGAAGTGCAAGCCGGCCAGCGCCTTCACTaGCCAGCCGCACTTCAGTTGCTTACACACTACGTGTGCATCCTG	+
Preference number: 5 (lower is better) Translates to: GSLAWGEVQAGQRLH*PAALQLLTHYVCIL Trigger: CAGGATGCACACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	GCTGGGGTGGTGGCTGGAAGTTCTGGTACCACTCTCCGGATGAGGTaGTGGAGCTGTCATCGGCTGAGGGCCCTGAAAACACTGCCGGAG	+
Preference number: 5 (lower is better) Translates to: AGVVAGSSGTTLRMR*WSCHRLRALKTLPE Trigger: CTCCGGCAGTGTTTTCAGGGCCCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACCACCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	ACTCGGCCAGCACAGCGGCTGCTACCATCCACTAACCGCACTGCTTaGTTCTCTGCACAGGTGACCCACACCAGCCGCCTGTCGCTGCTA	+
Preference number: 5 (lower is better) Translates to: TRPAQRLLPSTNRTA*FSAQVTHTSRLSLL Trigger: TAGCAGCGACAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACCAAGCAGTGCGGTTAGTGGATGGTAGCAGCCGCTGTGCTGGCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	TGCAGGAGTAGTACATTCTACCGTCCAGGGAGTGTGGCAGCCCCCTaGGCCGAGCCACTGCTGATCCGCAACCCAAGGACCGACAGAGCA	+
Preference number: 5 (lower is better) Translates to: CRSSTFYRPGSVAAP*AEPLLIRNPRTDRA Trigger: TGCTCTGTCGGTCCTTGGGTTGCGGATCAGCAGTGGCTCGGCCCAGGGGGCTGCCACACTCCCTGGACGGTAGAATGTACTACTCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	GGGGTGGTGGCTGGAAGTTCTGGTACCACTCTCCGGATGAGGTGCTaGAGCTGTCATCGGCTGAGGGCCCTGAAAACACTGCCGGAGAGC	+
Preference number: 5 (lower is better) Translates to: GVVAGSSGTTLRMRC*SCHRLRALKTLPES Trigger: GCTCTCCGGCAGTGTTTTCAGGGCCCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGCGGTGGATGGGTCCTaGGCCTGGGGTGAAGTGCAA	+
Preference number: 5 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRAVDGS*AWGEVQ Trigger: TTGCACTTCACCCCAGGCCAAGGACCCATCCACCGC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 90 bp	GGCTGCTACCATCCACTAACCGCACTGCTTGGTTCTCTGCACAGGTaGCCCACACCAGCCGCCTGTCGCTGCTACACTCCTGGTCCTGCA	+
Preference number: 5 (lower is better) Translates to: GCYHPLTALLGSLHR*PTPAACRCYTPGPA Trigger: TGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACCAAGCAGTGCGGTTAGTGGATGGTAGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	AAGTGCAAGCCGGCCAGCGCCTTCACTGCCCAGCCGCACTTCAGTTaGTTACACACTACGTGTGCATCCTGCAGGTCCCACGTGTCGTCG	+
Preference number: 5 (lower is better) Translates to: KCKPASAFTAQPHFS*LHTTCASCRSHVSS Trigger: CGACGACACGTGGGACCTGCAGGATGCACACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 90 bp	CTGTCACACACCGTGCTCCAGACACCCCGGAAGTACACTTCCACTTaGCCTTCGCAGGAGTCAATGCCTCCAGTCAGGCGCCAGGACTGG	+
Preference number: 5 (lower is better) Translates to: LSHTVLQTPRKYTST*PSQESMPPVRRQDW Trigger: CCAGTCCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	TCTGCACAGGTGACCCACACCAGCCGCCTGTCGCTGCTACACTCCTaGTCCTGCACCTTGCAGAACTGCCAATTGGCTCCCCTGCATCTC	+
Preference number: 5 (lower is better) Translates to: SAQVTHTSRLSLLHS*SCTLQNCQLAPLHL Trigger: GAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCTGGTGTGGGTCACCTGTGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	AGATGTCTCTGGGAGCCTGAGCAGACAACCCTGGCTGCCCGCGACTaGCTGCACAGGTTGGAGTTGTTGAACCGCCAGGAACAGGTGCTG	+
Preference number: 5 (lower is better) Translates to: RCLWEPEQTTLAARD*LHRLELLNRQEQVL Trigger: CAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAGGCTCCCAGAGACATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	CGTGGTACTGAGAGCCCCGAGAGGGGACATCTGCCACACAGGGTCTaGGGTCAGCCGCTGGGATGTGGGAAACATGCAGCTCTTCAAGTC	+
Preference number: 5 (lower is better) Translates to: RGTESPERGHLPHRV*GQPLGCGKHAALQV Trigger: GACTTGAAGAGCTGCATGTTTCCCACATCCCAGCGGCTGACCCCAGACCCTGTGTGGCAGATGTCCCCTCTCGGGGCTCTCAGTACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGGGATGGTGCCATTTTaGTGCTGGCCAGAGGGGGCT	+
Preference number: 5 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRGMVPF*CWPEGA Trigger: AGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 90 bp	AGACACCCCGGAAGTACACTTCCACTTGCCCTTCGCAGGAGTCAATaGCTCCAGTCAGGCGCCAGGACTGGTGCTCTGAGCACACCACTC	+
Preference number: 5 (lower is better) Translates to: RHPGSTLPLALRRSQ*LQSGARTGALSTPL Trigger: GAGTGGTGTGCTCAGAGCACCAGTCCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTCCGGGGTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	TGTCGCTGCTACACTCCTGGTCCTGCACCTTGCAGAACTGCCAATTaGCTCCCCTGCATCTCTCAGTTGGTGCCCGCGCCCACGTCGTAT	+
Preference number: 5 (lower is better) Translates to: CRCYTPGPAPCRTAN*LPCISQLVPAPTSY Trigger: ATACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	GAGGGGACATCTGCCACACAGGGTCTGGGGTCAGCCGCTGGGATGTaGGAAACATGCAGCTCTTCAAGTCCTTCCTCCAAGGGTGGCATC	+
Preference number: 5 (lower is better) Translates to: EGTSATQGLGSAAGM*ETCSSSSPSSKGGI Trigger: GATGCCACCCTTGGAGGAAGGACTTGAAGAGCTGCATGTTTCCCACATCCCAGCGGCTGACCCCAGACCCTGTGTGGCAGATGTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	GGGCCAGGGGGTCCTGGACATTCAAACTGTTCTGCTGGAGGATGCTaGGGTGGTGGCTGGAAGTTCTGGTACCACTCTCCGGATGAGGTG	+
Preference number: 5 (lower is better) Translates to: GPGGPGHSNCSAGGC*GGGWKFWYHSPDEV Trigger: CACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGAACAGTTTGAATGTCCAGGACCCCCTGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGACTGGCTGCACAGGTaGGAGTTGTTGAACCGCCAG	+
Preference number: 5 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRDWLHR*ELLNRQ Trigger: CTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 90 bp	AGAGCACTTTGGCCTCAGATGGGTACCACTCGCTGTCACACACCGTaGTCCAGACACCCCGGAAGTACACTTCCACTTGCCCTTCGCAGG	+
Preference number: 5 (lower is better) Translates to: RALWPQMGTTRCHTP*SRHPGSTLPLALRR Trigger: CCTGCGAAGGGCAAGTGGAAGTGTACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAGCGAGTGGTACCCATCTGAGGCCAAAGTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATGACCGACAGAGCACTTaGGCCTCAGATGGGTACCAC	+
Preference number: 5 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYDRQST*ASDGYH Trigger: GTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGTC...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTGACCGACAGAGCACTTaGGCCTCAGATGGGTACCAC	+
Preference number: 5 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSDRQST*ASDGYH Trigger: GTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGTC...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCCACAGGTTGGAGTTGTaGAACCGCCAGGAACAGGTG	+
Preference number: 5 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLHRLEL*NRQEQV Trigger: CACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTG...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGCACAGGTTGGAGTTGTaGAACCGCCAGGAACAGGTG	+
Preference number: 5 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRHRLEL*NRQEQV Trigger: CACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTG...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 90 bp	GGAAGGCACTTCAGAAGTAGACAGATTGAGATGTCTCTGGGAGCCTaGGCAGACAACCCTGGCTGCCCGCGACTGGCTGCACAGGTTGGA	+
Preference number: 5 (lower is better) Translates to: GRHFRSRQIEMSLGA*ADNPGCPRLAAQVG Trigger: TCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAGGCTCCCAGAGACATCTCAATCTGTCTACTTCTGAAGTGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 90 bp	CGCTCCTCTAGGTCCAAGGTCATGTTCGGGATGGTGCCATTTTTGTaGTGGCCAGAGGGGGCTGGAGATGGGAGACCTGAGAGAACTGCT	+
Preference number: 5 (lower is better) Translates to: RSSRSKVMFGMVPFL*WPEGAGDGRPERTA Trigger: AGCAGTTCTCTCAGGTCTCCCATCTCCAGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCCGAACATGACCTTGGACCTAGAGGAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	GGAACTCTGGAAGGCACTTCAGAAGTAGACAGATTGAGATGTCTCTaGGAGCCTGAGCAGACAACCCTGGCTGCCCGCGACTGGCTGCAC	+
Preference number: 5 (lower is better) Translates to: GTLEGTSEVDRLRCL*EPEQTTLAARDWLH Trigger: GTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAGGCTCCCAGAGACATCTCAATCTGTCTACTTCTGAAGTGCCTTCCAGAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	TCAAACTGTTCTGCTGGAGGATGCTGGGGTGGTGGCTGGAAGTTCTaGTACCACTCTCCGGATGAGGTGCTGGAGCTGTCATCGGCTGAG	+
Preference number: 5 (lower is better) Translates to: SNCSAGGCWGGGWKF*YHSPDEVLELSSAE Trigger: CTCAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGAACAGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTAGCAGGGAGGGCGTATaGTCCTTTGGCTCTCAAGAG	+
Preference number: 5 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSSREGV*SFGSQE Trigger: CTCTTGAGAGCCAAAGGACAATACGCCCTCCCTGCT...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATAGCAGGGAGGGCGTATaGTCCTTTGGCTCTCAAGAG	+
Preference number: 5 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYSREGV*SFGSQE Trigger: CTCTTGAGAGCCAAAGGACAATACGCCCTCCCTGCT...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	TTCTTGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTGATCCCTGCTTGGTaGGCAGTAGACAGTTGCTGG	+
Preference number: 5 (lower is better) Translates to: FLSQWGCGSPDSGRAGMLLIPAW*AVDSCW Trigger: CCAGCAACTGTCTACTGCCAACCAAGCAGGGATCAA...GAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	TCCTCTAGGTCCAAGGTCATGTTCGGGATGGTGCCATTTTTGTGCTaGCCAGAGGGGGCTGGAGATGGGAGACCTGAGAGAACTGCTGTC	+
Preference number: 5 (lower is better) Translates to: SSRSKVMFGMVPFLC*PEGAGDGRPERTAV Trigger: GACAGCAGTTCTCTCAGGTCTCCCATCTCCAGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCCGAACATGACCTTGGACCTAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	GCTTGTGTTCCCAGAAGTGGCTCCTGGTGGAAGCTCAGAGGTGGGTaGCATCAGGTAGGTAACCTTTCCCGAATCACCACAGTTCAGCGC	+
Preference number: 5 (lower is better) Translates to: ACVPRSGSWWKLRGG*HQVGNLSRITTVQR Trigger: GCGCTGAACTGTGGTGATTCGGGAAAGGTTACCTACCTGATGCCACCCACCTCTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 90 bp	CCTGGACATTCAAACTGTTCTGCTGGAGGATGCTGGGGTGGTGGCTaGAAGTTCTGGTACCACTCTCCGGATGAGGTGCTGGAGCTGTCA	+
Preference number: 5 (lower is better) Translates to: PGHSNCSAGGCWGGG*KFWYHSPDEVLELS Trigger: TGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGAACAGTTTGAATGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	GACCCGGTGTCGCTGGGAATTGTAGAAGGTGGTCAGGGCCACAGGTaGCTGGGAGCTGAAGTCATAGTGCTCATAGTCGGAGTCAGAACT	+
Preference number: 5 (lower is better) Translates to: DPVSLGIVEGGQGHR*LGAEVIVLIVGVRT Trigger: AGTTCTGACTCCGACTATGAGCACTATGACTTCAGCTCCCAGCCACCTGTGGCCCTGACCACCTTCTACAATTCCCAGCGACACCGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAGCGGTGGATGGGTCCTaGGCCTGGGGTGAAGTGCAA	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQAVDGS*AWGEVQ Trigger: TTGCACTTCACCCCAGGCCAAGGACCCATCCACCGC...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 90 bp	GCTGGGAATTGTAGAAGGTGGTCAGGGCCACAGGTGGCTGGGAGCTaGAGTCATAGTGCTCATAGTCGGAGTCAGAACTGGAGTCCGAGT	+
Preference number: 5 (lower is better) Translates to: AGNCRRWSGPQVAGS*SHSAHSRSQNWSPS Trigger: ACTCGGACTCCAGTTCTGACTCCGACTATGAGCACTATGACTTCAGCTCCCAGCCACCTGTGGCCCTGACCACCTTCTACAATTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAGGGATGGTGCCATTTTaGTGCTGGCCAGAGGGGGCT	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQGMVPF*CWPEGA Trigger: AGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCC...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	TGTCCCAATGGGGCTGTGGATCCCCTGACTCAGGCAGGGCAGGGATGCTCTTATGAAGTACACTTCCACTaGCCCTTCGCAGGAGTCAAT	+
Preference number: 5 (lower is better) Translates to: CPNGAVDPLTQAGQGCSYEVHFH*PFAGVN Trigger: ATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTC...ATAAGAGCATCCCTGCCCTGCCTGAGTCAGGGGATCCACAGCCCCATTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCCTGCACAGGTTGGAGTaGTTGAACCGCCAGGAACAG	+
Preference number: 5 (lower is better) Translates to: PGCIETSLTSWVIMAAPGLHRLE*LNRQEQ Trigger: CTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAG...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCCTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGGTTATTGATCCCTGCTaGGTTGGCAGTAGACAGTTG	+
Preference number: 5 (lower is better) Translates to: SLAGTLQFSDAVGRTCLRVIDPC*VGSRQL Trigger: CAACTGTCTACTGCCAACCAAGCAGGGATCAATAAC...CCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	CCAGGTTGTATTGAGACATCGCTGACTTCCTGGGTGATAATGGCAGCCCCTGGCTTCCATGGAGGTGGCTaGCTGCTGGGATCATTGCAG	+
Preference number: 5 (lower is better) Translates to: PGCIETSLTSWVIMAAPGFHGGG*LLGSLQ Trigger: CTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAA...GCCAGGGGCTGCCATTATCACCCAGGAAGTCAGCGATGTCTCAATACAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 90 bp	GACTCTTCTCAGAATAAAACGCCTGGGAATTCCATGGAGGTGGCTTaGTGCTGGGATCATTGCAGTAGCCCTCCTCAGAGGAGGTGCTGG	+
Preference number: 5 (lower is better) Translates to: DSSQNKTPGNSMEVA*CWDHCSSPPQRRCW Trigger: CCAGCACCTCCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGAAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	GAGGGGACTCTTCTCAGAATAAAACGCCTGGGAATTCCATGGAGGTaGCTTGCTGCTGGGATCATTGCAGTAGCCCTCCTCAGAGGAGGT	+
Preference number: 5 (lower is better) Translates to: EGTLLRIKRLGIPWR*LAAGIIAVALLRGG Trigger: ACCTCCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGAAGAGTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAGACTGGCTGCACAGGTaGGAGTTGTTGAACCGCCAG	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQDWLHR*ELLNRQ Trigger: CTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTC...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	CTGGCTGGGACCCTCCAGTTCTCTGACGCTGTGGGGAGGACCTGTTTAAGGTCTTCAGAAGTAGACAGATaGAGATGTCTCTGGGAGCCT	+
Preference number: 5 (lower is better) Translates to: LAGTLQFSDAVGRTCLRSSEVDR*RCLWEP Trigger: AGGCTCCCAGAGACATCTCAATCTGTCTACTTCTGA...AGACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	GATAATGGCAGCCCCTGGCCCAGGGCCTGTATTTCAGCAGTGGGTGGGCTACTCAGGGCGTATTGTCCTTaGGCTCTCAAGAGAAGAATA	+
Preference number: 5 (lower is better) Translates to: DNGSPWPRACISAVGGLLRAYCP*ALKRRI Trigger: TATTCTTCTCTTGAGAGCCAAAGGACAATACGCCCT...GAGTAGCCCACCCACTGCTGAAATACAGGCCCTGGGCCAGGGGCTGCCATTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 90 bp	TCTCAGAATAAAACGCCTGGGAATTCCATGGAGGTGGCTTGCTGCTaGGATCATTGCAGTAGCCCTCCTCAGAGGAGGTGCTGGAATCAC	+
Preference number: 5 (lower is better) Translates to: SQNKTPGNSMEVACC*DHCSSPPQRRCWNH Trigger: GTGATTCCAGCACCTCCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAATTCCATGGAGGTGGCTaGCTGCTGGGATCATTGCAG	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQFHGGG*LLGSLQ Trigger: CTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAA...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 90 bp	TCTTCTCAGAATAAAACGCCTGGGAATTCCATGGAGGTGGCTTGCTaGTGGGATCATTGCAGTAGCCCTCCTCAGAGGAGGTGCTGGAAT	+
Preference number: 5 (lower is better) Translates to: SSQNKTPGNSMEVAC*WDHCSSPPQRRCWN Trigger: ATTCCAGCACCTCCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAACGCTGGGAATCTTCTTaGGCAATGGTGATAGGGACA	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQRWESS*AMVIGT Trigger: TGTCCCTATCACCATTGCCAAAGAAGATTCCCAGCG...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039043.15
CDS-3UTR CAA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCACTGCACAGGTTGGAGTaGTTGAACCGCCAGGAACAG	+
Preference number: 5 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSLHRLE*LNRQEQ Trigger: CTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAG...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS-3UTR CAA 90 bp	AGCTCTCACACCACTGGCTTTGTCTTCTGTTCCGGGCTCCTGCAGGTTAATCAAAGGGCGTATTGTCCTTaGGCTCTCAAGAGAAGAATA	+
Preference number: 5 (lower is better) Translates to: SSHTTGFVFCSGLLQVNQRAYCP*ALKRRI Trigger: TATTCTTCTCTTGAGAGCCAAAGGACAATACGCCCT...TTGATTAACCTGCAGGAGCCCGGAACAGAAGACAAAGCCAGTGGTGTGAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 90 bp	GAGAATTCCCAGGACAATACAGAGAATGAGAAGTGTCAGCCCTTGTaGGTCCTTATCCTTCACGCTCACCGGCACAGAAGATTCTATCGT	+
Preference number: 5 (lower is better) Translates to: ENSQDNTENEKCQPL*VLILHAHRHRRFYR Trigger: ACGATAGAATCTTCTGTGCCGGTGAGCGTGAAGGATAAGGACTCACAAGGGCTGACACTTCTCATTCTCTGTATTGTCCTGGGAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS-3UTR CAA 90 bp	AATAATTGTCTAGGGATAGAGAAAGGAGTCCAGCTAGTGCCTGTGGTGGACTCATCAGAAGTAGACAGATaGAGATGTCTCTGGGAGCCT	+
Preference number: 5 (lower is better) Translates to: NNCLGIEKGVQLVPVVDSSEVDR*RCLWEP Trigger: AGGCTCCCAGAGACATCTCAATCTGTCTACTTCTGA...TGAGTCCACCACAGGCACTAGCTGGACTCCTTTCTCTATCCCTAGACAATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 72 bp	TCACCTGATCGCGGTGGATGGGTCCTTGGCCTGGGGTaGAGTGCAAGCCGGCCAGCGCCTTCACTGCCCAGC	+
Preference number: 6 (lower is better) Translates to: SPDRGGWVLGLG*SASRPAPSLPS Trigger: GCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 72 bp	CTGGCTGCCCGCGACTGGCTGCACAGGTTGGAGTTGTaGAACCGCCAGGAACAGGTGCTGAGGGCGGGCTCC	+
Preference number: 6 (lower is better) Translates to: LAARDWLHRLEL*NRQEQVLRAGS Trigger: GGAGCCCGCCCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	ACCCTGGCTGCCCGCGACTGGCTGCACAGGTTGGAGTaGTTGAACCGCCAGGAACAGGTGCTGAGGGCGGGC	+
Preference number: 6 (lower is better) Translates to: TLAARDWLHRLE*LNRQEQVLRAG Trigger: GCCCGCCCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 90 bp	GAGCCTGAGCAGACAACCCTGGCTGCCCGCGACTGGCTGCACAGGTaGGAGTTGTTGAACCGCCAGGAACAGGTGCTGAGGGCGGGCTCC	+
Preference number: 6 (lower is better) Translates to: EPEQTTLAARDWLHR*ELLNRQEQVLRAGS Trigger: GGAGCCCGCCCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAGGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	GCAGTTCACCTGATCGCGGTGGATGGGTCCTTGGCCTaGGGTGAAGTGCAAGCCGGCCAGCGCCTTCACTGC	+
Preference number: 6 (lower is better) Translates to: AVHLIAVDGSLA*GEVQAGQRLHC Trigger: GCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGAACTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 72 bp	CCCAGAGCAGTTCACCTGATCGCGGTGGATGGGTCCTaGGCCTGGGGTGAAGTGCAAGCCGGCCAGCGCCTT	+
Preference number: 6 (lower is better) Translates to: PRAVHLIAVDGS*AWGEVQAGQRL Trigger: AAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGAACTGCTCTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	AGCCTCAGTCCCAGAGCAGTTCACCTGATCGCGGTGGATGGGTCCTaGGCCTGGGGTGAAGTGCAAGCCGGCCAGCGCCTTCACTGCCCA	+
Preference number: 6 (lower is better) Translates to: SLSPRAVHLIAVDGS*AWGEVQAGQRLHCP Trigger: TGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGCCAAGGACCCATCCACCGCGATCAGGTGAACTGCTCTGGGACTGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	GAGCAGACAACCCTGGCTGCCCGCGACTGGCTGCACAGGTTGGAGTaGTTGAACCGCCAGGAACAGGTGCTGAGGGCGGGCTCCTGTCCT	+
Preference number: 6 (lower is better) Translates to: EQTTLAARDWLHRLE*LNRQEQVLRAGSCP Trigger: AGGACAGGAGCCCGCCCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	CAGTTGGTGCCCGCGCCCACGTCGTATTCCCGGCGCTaGTTGTGTTCCCAGAAGTGGCTCCTGGTGGAAGCT	+
Preference number: 6 (lower is better) Translates to: QLVPAPTSYSRR*LCSQKWLLVEA Trigger: AGCTTCCACCAGGAGCCACTTCTGGGAACACAAGCAGCGCCGGGAATACGACGTGGGCGCGGGCACCAACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	GCAGAACTGCCAATTGGCTCCCCTGCATCTCTCAGTTaGTGCCCGCGCCCACGTCGTATTCCCGGCGCTGCT	+
Preference number: 6 (lower is better) Translates to: AELPIGSPASLS*CPRPRRIPGAA Trigger: AGCAGCGCCGGGAATACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	AGTACATTCTACCGTCCAGGGAGTGTGGCAGCCCCCTaGGCCGAGCCACTGCTGATCCGCAACCCAAGGACC	+
Preference number: 6 (lower is better) Translates to: STFYRPGSVAAP*AEPLLIRNPRT Trigger: GGTCCTTGGGTTGCGGATCAGCAGTGGCTCGGCCCAGGGGGCTGCCACACTCCCTGGACGGTAGAATGTACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	TTGGTGCCCGCGCCCACGTCGTATTCCCGGCGCTGCTaGTGTTCCCAGAAGTGGCTCCTGGTGGAAGCTCAG	+
Preference number: 6 (lower is better) Translates to: LVPAPTSYSRRC*CSQKWLLVEAQ Trigger: CTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAAGCAGCGCCGGGAATACGACGTGGGCGCGGGCACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	CAGACAACCCTGGCTGCCCGCGACTGGCTGCACAGGTTGGAGTTGTaGAACCGCCAGGAACAGGTGCTGAGGGCGGGCTCCTGTCCTTTG	+
Preference number: 6 (lower is better) Translates to: QTTLAARDWLHRLEL*NRQEQVLRAGSCPL Trigger: CAAAGGACAGGAGCCCGCCCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 90 bp	ATCTCTCAGTTGGTGCCCGCGCCCACGTCGTATTCCCGGCGCTGCTaGTGTTCCCAGAAGTGGCTCCTGGTGGAAGCTCAGAGGTGGGTG	+
Preference number: 6 (lower is better) Translates to: ISQLVPAPTSYSRRC*CSQKWLLVEAQRWV Trigger: CACCCACCTCTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAAGCAGCGCCGGGAATACGACGTGGGCGCGGGCACCAACTGAGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	GAACTGCCAATTGGCTCCCCTGCATCTCTCAGTTGGTaGCCGCGCCCACGTCGTATTCCCGGCGCTGCTTGT	+
Preference number: 6 (lower is better) Translates to: ELPIGSPASLSW*PRPRRIPGAAC Trigger: ACAAGCAGCGCCGGGAATACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	CCGGCCAGCGCCTTCACTGCCCAGCCGCACTTCAGTTaGTTACACACTACGTGTGCATCCTGCAGGTCCCAC	+
Preference number: 6 (lower is better) Translates to: PASAFTAQPHFS*LHTTCASCRSH Trigger: GTGGGACCTGCAGGATGCACACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	GCCTGGGGTGAAGTGCAAGCCGGCCAGCGCCTTCACTaGCCAGCCGCACTTCAGTTGCTTACACACTACGTG	+
Preference number: 6 (lower is better) Translates to: AWGEVQAGQRLH*PAALQLLTHYV Trigger: CACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTCACCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	GCACAGCGGCTGCTACCATCCACTAACCGCACTGCTTaGTTCTCTGCACAGGTGACCCACACCAGCCGCCTG	+
Preference number: 6 (lower is better) Translates to: AQRLLPSTNRTA*FSAQVTHTSRL Trigger: CAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACCAAGCAGTGCGGTTAGTGGATGGTAGCAGCCGCTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	TCGCAGGAGTCAATGCCTCCAGTCAGGCGCCAGGACTaGTGCTCTGAGCACACCACTCCTGCGTCCTCCTTG	+
Preference number: 6 (lower is better) Translates to: SQESMPPVRRQD*CSEHTTPASSL Trigger: CAAGGAGGACGCAGGAGTGGTGTGCTCAGAGCACCAGTCCTGGCGCCTGACTGGAGGCATTGACTCCTGCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	TGGGAGCCTGAGCAGACAACCCTGGCTGCCCGCGACTaGCTGCACAGGTTGGAGTTGTTGAACCGCCAGGAA	+
Preference number: 6 (lower is better) Translates to: WEPEQTTLAARD*LHRLELLNRQE Trigger: TTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTGCTCAGGCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	GCCGGCCAGCGCCTTCACTGCCCAGCCGCACTTCAGTaGCTTACACACTACGTGTGCATCCTGCAGGTCCCA	+
Preference number: 6 (lower is better) Translates to: AGQRLHCPAALQ*LTHYVCILQVP Trigger: TGGGACCTGCAGGATGCACACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 72 bp	CAGACAACCCTGGCTGCCCGCGACTGGCTGCACAGGTaGGAGTTGTTGAACCGCCAGGAACAGGTGCTGAGG	+
Preference number: 6 (lower is better) Translates to: QTTLAARDWLHR*ELLNRQEQVLR Trigger: CCTCAGCACCTGTTCCTGGCGGTTCAACAACTCCAACCTGTGCAGCCAGTCGCGGGCAGCCAGGGTTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 90 bp	CTGTCGCTGCTACACTCCTGGTCCTGCACCTTGCAGAACTGCCAATaGGCTCCCCTGCATCTCTCAGTTGGTGCCCGCGCCCACGTCGTA	+
Preference number: 6 (lower is better) Translates to: LSLLHSWSCTLQNCQ*APLHLSVGARAHVV Trigger: TACGACGTGGGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	ACCCACACCAGCCGCCTGTCGCTGCTACACTCCTGGTCCTGCACCTaGCAGAACTGCCAATTGGCTCCCCTGCATCTCTCAGTTGGTGCC	+
Preference number: 6 (lower is better) Translates to: THTSRLSLLHSWSCT*QNCQLAPLHLSVGA Trigger: GGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCTGGTGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	GAAGTGCAAGCCGGCCAGCGCCTTCACTGCCCAGCCGCACTTCAGTaGCTTACACACTACGTGTGCATCCTGCAGGTCCCACGTGTCGTC	+
Preference number: 6 (lower is better) Translates to: EVQAGQRLHCPAALQ*LTHYVCILQVPRVV Trigger: GACGACACGTGGGACCTGCAGGATGCACACGTAGTGTGTAAGCAACTGAAGTGCGGCTGGGCAGTGAAGGCGCTGGCCGGCTTGCACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 90 bp	GCTGTCACACACCGTGCTCCAGACACCCCGGAAGTACACTTCCACTaGCCCTTCGCAGGAGTCAATGCCTCCAGTCAGGCGCCAGGACTG	+
Preference number: 6 (lower is better) Translates to: AVTHRAPDTPEVHFH*PFAGVNASSQAPGL Trigger: CAGTCCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 72 bp	GTCAATGCCTCCAGTCAGGCGCCAGGACTGGTGCTCTaGGCACACCACTCCTGCGTCCTCCTTGTGACCACA	+
Preference number: 6 (lower is better) Translates to: VNASSQAPGLVL*AHHSCVLLVTT Trigger: TGTGGTCACAAGGAGGACGCAGGAGTGGTGTGCTCAGAGCACCAGTCCTGGCGCCTGACTGGAGGCATTGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	CACACCAGCCGCCTGTCGCTGCTACACTCCTGGTCCTaGACCTTGCAGAACTGCCAATTGGCTCCCCTGCAT	+
Preference number: 6 (lower is better) Translates to: HTSRLSLLHSWS*TLQNCQLAPLH Trigger: ATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCTGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	CCAGCCGCTCCTCTAGGTCCAAGGTCATGTTCGGGATaGTGCCATTTTTGTGCTGGCCAGAGGGGGCTGGAG	+
Preference number: 6 (lower is better) Translates to: PAAPLGPRSCSG*CHFCAGQRGLE Trigger: CTCCAGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCCGAACATGACCTTGGACCTAGAGGAGCGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 72 bp	CTACACTCCTGGTCCTGCACCTTGCAGAACTGCCAATaGGCTCCCCTGCATCTCTCAGTTGGTGCCCGCGCC	+
Preference number: 6 (lower is better) Translates to: LHSWSCTLQNCQ*APLHLSVGARA Trigger: GGCGCGGGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CAA 72 bp	CACCGTGCTCCAGACACCCCGGAAGTACACTTCCACTaGCCCTTCGCAGGAGTCAATGCCTCCAGTCAGGCG	+
Preference number: 6 (lower is better) Translates to: HRAPDTPEVHFH*PFAGVNASSQA Trigger: CGCCTGACTGGAGGCATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTCCGGGGTGTCTGGAGCACGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 72 bp	CATCCACTAACCGCACTGCTTGGTTCTCTGCACAGGTaGCCCACACCAGCCGCCTGTCGCTGCTACACTCCT	+
Preference number: 6 (lower is better) Translates to: HPLTALLGSLHR*PTPAACRCYTP Trigger: AGGAGTGTAGCAGCGACAGGCGGCTGGTGTGGGTCACCTGTGCAGAGAACCAAGCAGTGCGGTTAGTGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	GCCGCTCCTCTAGGTCCAAGGTCATGTTCGGGATGGTaGCATTTTTGTGCTGGCCAGAGGGGGCTGGAGATG	+
Preference number: 6 (lower is better) Translates to: AAPLGPRSCSGW*HFCAGQRGLEM Trigger: CATCTCCAGCCCCCTCTGGCCAGCACAAAAATGGCACCATCCCGAACATGACCTTGGACCTAGAGGAGCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	GGAAGTACACTTCCACTTGCCCTTCGCAGGAGTCAATaGCTCCAGTCAGGCGCCAGGACTGGTGCTCTGAGC	+
Preference number: 6 (lower is better) Translates to: GSTLPLALRRSQ*LQSGARTGALS Trigger: GCTCAGAGCACCAGTCCTGGCGCCTGACTGGAGGCATTGACTCCTGCGAAGGGCAAGTGGAAGTGTACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	TGGCCTCAGATGGGTACCACTCGCTGTCACACACCGTaGTCCAGACACCCCGGAAGTACACTTCCACTTGCC	+
Preference number: 6 (lower is better) Translates to: WPQMGTTRCHTP*SRHPGSTLPLA Trigger: GGCAAGTGGAAGTGTACTTCCGGGGTGTCTGGAGCACGGTGTGTGACAGCGAGTGGTACCCATCTGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	CAGGGTCTGGGGTCAGCCGCTGGGATGTGGGAAACATaGAGCTCTTCAAGTCCTTCCTCCAAGGGTGGCATC	+
Preference number: 6 (lower is better) Translates to: QGLGSAAGMWET*SSSSPSSKGGI Trigger: GATGCCACCCTTGGAGGAAGGACTTGAAGAGCTGCATGTTTCCCACATCCCAGCGGCTGACCCCAGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	GTGCTCATAGTCGGAGTCAGAACTGGAGTCCGAGTCTaGAGGGACCCGGGGCTGGATGAACAGCATAGGAGC	+
Preference number: 6 (lower is better) Translates to: VLIVGVRTGVRV*RDPGLDEQHRS Trigger: GCTCCTATGCTGTTCATCCAGCCCCGGGTCCCTGCAGACTCGGACTCCAGTTCTGACTCCGACTATGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS CCA 72 bp	ATTCCCGGCGCTGCTTGTGTTCCCAGAAGTGGCTCCTaGTGGAAGCTCAGAGGTGGGTGGCATCAGGTAGGT	+
Preference number: 6 (lower is better) Translates to: IPGAACVPRSGS*WKLRGGWHQVG Trigger: ACCTACCTGATGCCACCCACCTCTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAAGCAGCGCCGGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	ACGTCGTATTCCCGGCGCTGCTTGTGTTCCCAGAAGTaGCTCCTGGTGGAAGCTCAGAGGTGGGTGGCATCA	+
Preference number: 6 (lower is better) Translates to: TSYSRRCLCSQK*LLVEAQRWVAS Trigger: TGATGCCACCCACCTCTGAGCTTCCACCAGGAGCCACTTCTGGGAACACAAGCAGCGCCGGGAATACGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS CCA 72 bp	GCAACCCAAGGACCGACAGAGCACTTTGGCCTCAGATaGGTACCACTCGCTGTCACACACCGTGCTCCAGAC	+
Preference number: 6 (lower is better) Translates to: ATQGPTEHFGLR*VPLAVTHRAPD Trigger: GTCTGGAGCACGGTGTGTGACAGCGAGTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGTCCTTGGGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	CTGCTGATCCGCAACCCAAGGACCGACAGAGCACTTTaGCCTCAGATGGGTACCACTCGCTGTCACACACCG	+
Preference number: 6 (lower is better) Translates to: LLIRNPRTDRAL*PQMGTTRCHTP Trigger: CGGTGTGTGACAGCGAGTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGTCCTTGGGTTGCGGATCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	GGGGACATCTGCCACACAGGGTCTGGGGTCAGCCGCTaGGATGTGGGAAACATGCAGCTCTTCAAGTCCTTC	+
Preference number: 6 (lower is better) Translates to: GDICHTGSGVSR*DVGNMQLFKSF Trigger: GAAGGACTTGAAGAGCTGCATGTTTCCCACATCCCAGCGGCTGACCCCAGACCCTGTGTGGCAGATGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	AGCCGCCTGTCGCTGCTACACTCCTGGTCCTGCACCTaGCAGAACTGCCAATTGGCTCCCCTGCATCTCTCA	+
Preference number: 6 (lower is better) Translates to: SRLSLLHSWSCT*QNCQLAPLHLS Trigger: TGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGACAGGCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	TCGCTGCTACACTCCTGGTCCTGCACCTTGCAGAACTaGCAATTGGCTCCCCTGCATCTCTCAGTTGGTGCC	+
Preference number: 6 (lower is better) Translates to: SLLHSWSCTLQN*QLAPLHLSVGA Trigger: GGCACCAACTGAGAGATGCAGGGGAGCCAATTGGCAGTTCTGCAAGGTGCAGGACCAGGAGTGTAGCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12 ENSMUST00000174176.3
CDS GCA 72 bp	GTGGCTGGAAGTTCTGGTACCACTCTCCGGATGAGGTaGTGGAGCTGTCATCGGCTGAGGGCCCTGAAAACA	+
Preference number: 6 (lower is better) Translates to: VAGSSGTTLRMR*WSCHRLRALKT Trigger: TGTTTTCAGGGCCCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	GCTGGAAGTTCTGGTACCACTCTCCGGATGAGGTGCTaGAGCTGTCATCGGCTGAGGGCCCTGAAAACACTG	+
Preference number: 6 (lower is better) Translates to: AGSSGTTLRMRC*SCHRLRALKTL Trigger: CAGTGTTTTCAGGGCCCTCAGCCGATGACAGCTCCAGCACCTCATCCGGAGAGTGGTACCAGAACTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	ACTGCTGATCCGCAACCCAAGGACCGACAGAGCACTTaGGCCTCAGATGGGTACCACTCGCTGTCACACACC	+
Preference number: 6 (lower is better) Translates to: TADPQPKDRQST*ASDGYHSLSHT Trigger: GGTGTGTGACAGCGAGTGGTACCCATCTGAGGCCAAAGTGCTCTGTCGGTCCTTGGGTTGCGGATCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	GGTCCTGGACATTCAAACTGTTCTGCTGGAGGATGCTaGGGTGGTGGCTGGAAGTTCTGGTACCACTCTCCG	+
Preference number: 6 (lower is better) Translates to: GPGHSNCSAGGC*GGGWKFWYHSP Trigger: CGGAGAGTGGTACCAGAACTTCCAGCCACCACCCCAGCATCCTCCAGCAGAACAGTTTGAATGTCCAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	TCAGAACTGGAGTCCGAGTCTGCAGGGACCCGGGGCTaGATGAACAGCATAGGAGCTTCTTTGGCAATGGTG	+
Preference number: 6 (lower is better) Translates to: SELESESAGTRG*MNSIGASLAMV Trigger: CACCATTGCCAAAGAAGCTCCTATGCTGTTCATCCAGCCCCGGGTCCCTGCAGACTCGGACTCCAGTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS TCA 72 bp	TGTAGAAGGTGGTCAGGGCCACAGGTGGCTGGGAGCTaGAGTCATAGTGCTCATAGTCGGAGTCAGAACTGG	+
Preference number: 6 (lower is better) Translates to: CRRWSGPQVAGS*SHSAHSRSQNW Trigger: CCAGTTCTGACTCCGACTATGAGCACTATGACTTCAGCTCCCAGCCACCTGTGGCCCTGACCACCTTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS TCA 72 bp	GCATCTGAAACCTGTTCTGCTGAGCTTCCTCCTCTGTaGCCCGGTGTCGCTGGGAATTGTAGAAGGTGGTCA	+
Preference number: 6 (lower is better) Translates to: ASETCSAELPPL*PGVAGNCRRWS Trigger: TGACCACCTTCTACAATTCCCAGCGACACCGGGTCACAGAGGAGGAAGCTCAGCAGAACAGGTTTCAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080292.12
CDS GCA 72 bp	AATAAAACGCCTGGGAATTCCATGGAGGTGGCTTGCTaGTGGGATCATTGCAGTAGCCCTCCTCAGAGGAGG	+
Preference number: 6 (lower is better) Translates to: NKTPGNSMEVAC*WDHCSSPPQRR Trigger: CCTCCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	CAGAATAAAACGCCTGGGAATTCCATGGAGGTGGCTTaGTGCTGGGATCATTGCAGTAGCCCTCCTCAGAGG	+
Preference number: 6 (lower is better) Translates to: QNKTPGNSMEVA*CWDHCSSPPQR Trigger: CCTCTGAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	TGGGATCATTGCAGTAGCCCTCCTCAGAGGAGGTGCTaGAATCACTGTTGTTCCTCACGTGGTACTGAGAGC	+
Preference number: 6 (lower is better) Translates to: WDHCSSPPQRRC*NHCCSSRGTES Trigger: GCTCTCAGTACCACGTGAGGAACAACAGTGATTCCAGCACCTCCTCTGAGGAGGGCTACTGCAATGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS TCA 72 bp	TGCTTGGTTGGCAGTAGACAGTTGCTGGTGGTTCACTaGAGCAGGGAGGGCGTATTGTCCTTTGGCTCTCAA	+
Preference number: 6 (lower is better) Translates to: CLVGSRQLLVVH*SREGVLSFGSQ Trigger: TTGAGAGCCAAAGGACAATACGCCCTCCCTGCTTCAGTGAACCACCAGCAACTGTCTACTGCCAACCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	CTTCTCAGAATAAAACGCCTGGGAATTCCATGGAGGTaGCTTGCTGCTGGGATCATTGCAGTAGCCCTCCTC	+
Preference number: 6 (lower is better) Translates to: LLRIKRLGIPWR*LAAGIIAVALL Trigger: GAGGAGGGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CCA 72 bp	GGGACTCTTCTCAGAATAAAACGCCTGGGAATTCCATaGAGGTGGCTTGCTGCTGGGATCATTGCAGTAGCC	+
Preference number: 6 (lower is better) Translates to: GTLLRIKRLGIP*RWLAAGIIAVA Trigger: GGCTACTGCAATGATCCCAGCAGCAAGCCACCTCCATGGAATTCCCAGGCGTTTTATTCTGAGAAGAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 90 bp	GACAGTTGCTGGTGGTTCACTGAAGCAGGGAGGGCGTATTGTCCTTaGGCTCTCAAGAGAAGAATAACTATGAAGATGGTGGAGACGAGG	+
Preference number: 6 (lower is better) Translates to: DSCWWFTEAGRAYCP*ALKRRITMKMVETR Trigger: CCTCGTCTCCACCATCTTCATAGTTATTCTTCTCTTGAGAGCCAAAGGACAATACGCCCTCCCTGCTTCAGTGAACCACCAGCAACTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS CAA 72 bp	ATCGTAATCCTCCTCATCATCATCAATGGAGTCTGTTaGGGGGCCAGGGGGTCCTGGACATTCAAACTGTTC	+
Preference number: 6 (lower is better) Translates to: IVILLIIINGVC*GARGSWTFKLF Trigger: GAACAGTTTGAATGTCCAGGACCCCCTGGCCCCCAAACAGACTCCATTGATGATGATGAGGAGGATTACGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12
CDS GCA 72 bp	AATGGTGATAGGGACAGGATGGTAGTTATTGATCCCTaGTTGGTTGGCAGTAGACAGTTGCTGGTGGTTCAC	+
Preference number: 6 (lower is better) Translates to: NGDRDRMVVIDP*LVGSRQLLVVH Trigger: GTGAACCACCAGCAACTGTCTACTGCCAACCAAGCAGGGATCAATAACTACCATCCTGTCCCTATCACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039043.15 ENSMUST00000080292.12

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu