Pregenerated sensors for CD5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015854Ensembl transcript IDs: ENSMUST00000015998.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTACAGCTGCTCACTCTGGCAGGCCCAAGAGTTGCAGGCAGGCTaGGGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: LYSCSLWQAQELQAG*GETVKVGAVHQGVN Trigger: GTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCCCCAGCCTGCCTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR CCA 90 bp | ACAGACAGGCTGTGTCTTAGTCCTGGCCTGTACAGCTGCTCACTCTaGCAGGCCCAAGAGTTGCAGGCAGGCTGGGGAGAGACAGTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: TDRLCLSPGLYSCSL*QAQELQAGWGETVK Trigger: CTTTACTGTCTCTCCCCAGCCTGCCTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTACAGGCCAGGACTAAGACACAGCCTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR CCA 90 bp | GAAGATATGCAAGTGACCCATCTACACAGGGAGGTGGTCAAGCTGTaGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACCTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: EDMQVTHLHREVVKL*TKQPLPKAHSNDLL Trigger: AAGAAGGTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCTGTGTAGATGGGTCACTTGCATATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACCAGCAGCTCATGTCTTaGGGTGATTATGGGGGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: EVVKLWTKQPLPKAHSNDQQLMS*GDYGGV Trigger: CACGCCCCCATAATCACCTCAAGACATGAGCTGCTG...GTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACTACAGCTGCTCACTCTaGCAGGCCCAAGAGTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: REVVKLWTKQPLPKAHSNYSCSL*QAQELQ Trigger: CTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTA...GTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACGTAACATTTGAGGGCTaGAGGAAACCACCCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: EVVKLWTKQPLPKAHSNDVTFEG*RKPPCC Trigger: GCAGCAGGGTGGTTTCCTGCAGCCCTCAAATGTTAC...GTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACCCCTGCTGCTTTCTCTaGGAGAAGCAGAGTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: REVVKLWTKQPLPKAHSNPCCFL*EKQSSE Trigger: TTCACTACTCTGCTTCTCTCAGAGAAAGCAGCAGGG...GTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGAAACCACCCTGCTGCTTTCTCTGAGAGAAGCAGAGTAGTGAAGTGTTATCTAAAGCCCACAGCCTaGTGTAACCACTGGGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: AGNHPAAFSERSRVVKCYLKPTA*CNHWEN Trigger: ATTCTCCCAGTGGTTACATCAGGCTGTGGGCTTTAG...ATAACACTTCACTACTCTGCTTCTCTCAGAGAAAGCAGCAGGGTGGTTTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACCTTTGTATTATCTCTCCTaGCTCCAAGAATCTGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GGQAVDKTAPSKGTLQRPLYYLS*LQESVY Trigger: GTAGACAGATTCTTGGAGGCAGGAGAGATAATACAA...AGGTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTGATTAATCCACTCATAAAGACTGAGGGATCAAACCACATGATGCAGTTGTCAACAGGTAACATTTaGGGGCTGCAGGAAACCACC | + |
|
Preference number: 2 (lower is better) Translates to: PVINPLIKTEGSNHMMQLSTGNI*GLQETT Trigger: GGTGGTTTCCTGCAGCCCTCAAATGTTACCTGTTGA...CAACTGCATCATGTGGTTTGATCCCTCAGTCTTTATGAGTGGATTAATCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR CCA 72 bp | CTGTGTCTTAGTCCTGGCCTGTACAGCTGCTCACTCTaGCAGGCCCAAGAGTTGCAGGCAGGCTGGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCLSPGLYSCSL*QAQELQAGWGE Trigger: CTCTCCCCAGCCTGCCTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTACAGGCCAGGACTAAGACACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR GCA 72 bp | ACAGACAGGCTGTGTCTTAGTCCTGGCCTGTACAGCTaGTCACTCTGGCAGGCCCAAGAGTTGCAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TDRLCLSPGLYS*SLWQAQELQAG Trigger: GCCTGCCTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTACAGGCCAGGACTAAGACACAGCCTGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR TCA 72 bp | TCGAGGCTGAGGGAAAGGTGTCTAAAGCCCACAGCCTaGTGTAACCACTGGGAGAATGAGGGCCCACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLRERCLKPTA*CNHWENEGPLN Trigger: GTTCAGTGGGCCCTCATTCTCCCAGTGGTTACATCAGGCTGTGGGCTTTAGACACCTTTCCCTCAGCCTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR CCA 72 bp | CAAGTGACCCATCTACACAGGGAGGTGGTCAAGCTGTaGACAAAACAGCCCCTTCCAAAGGCACACTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QVTHLHREVVKL*TKQPLPKAHSN Trigger: GTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCTGTGTAGATGGGTCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| 3UTR CCA 72 bp | CCCTCTCAAGTGTTCCTCATGTTGTCACATCCTCAGTaGTGTTCACAGACAGGCTGTGTCTTAGTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSQVFLMLSHPQ*CSQTGCVLVLA Trigger: GGCCAGGACTAAGACACAGCCTGTCTGTGAACACCACTGAGGATGTGACAACATGAGGAACACTTGAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTACAGCTGCTCACTCTGGCAGGCCCAAGAGTTGCAGGCAGGCTGGGGAGGCACATCCTCTGGAATaGAGAGGAGGTCACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACTAAHSGRPKSCRQAGEAHPLE*RGGHCL Trigger: CAGACAGTGACCTCCTCTTCATTCCAGAGGATGTGC...CTCCCCAGCCTGCCTGCAACTCTTGGGCCTGCCAGAGTGAGCAGCTGTACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGTGAACAGTGAGCCTAGGGCAGCTGGAAAGGTCAGCAAGGGAGCTCAGCTCCACTGGGACTGGTaGAGCACCTCCACTCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: QGVNSEPRAAGKVSKGAQLHWDW*STSTRP Trigger: GGGTCGAGTGGAGGTGCTCCACCAGTCCCAGTGGAG...CTGAGCTCCCTTGCTGACCTTTCCAGCTGCCCTAGGCTCACTGTTCACTCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTGGGGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGCCGGGTTTTGGGGGATaGATGGAGGGACTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRLGRDSKGGGCSPRSEQPGFGG*MEGLPT Trigger: TGTGGGAAGTCCCTCCATCCATCCCCCAAAACCCGG...CTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCCCCAGCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGTGAGCCTAGGCCTTCCCTGAGCAGTTaGCGTCATCCAGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GETVKVGAVHQGVNSEPRPSLSS*RHPARC Trigger: GCATCTGGCTGGATGACGTCAACTGCTCAGGGAAGG...CCTAGGCTCACTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCTGGGGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGAGACTGTTCCTTCCCTaGGCAGTTGACGTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLGRDSKGGGCSPRSEQRLFLP*AVDVIQ Trigger: CTGGATGACGTCAACTGCTCAGGGAAGGAACAGTCT...CTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCCCCAGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACCACACCCGAGCTGCCTaGACACCACCTTTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: EVVKLWTKQPLPKAHSNDHTRAA*TPPLRP Trigger: AGGTCTCAAAGGTGGTGTGCAGGCAGCTCGGGTGTG...GTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGTCAGCAAGGGAGCTCAGCAGCTCATGTCTTGAGGTGATTATGGGGGCGCAGCCAGATGCGGCCTaGCCCAGGCCCATAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSARELSSSCLEVIMGAQPDAA*PRPIDF Trigger: AAAATCTATGGGCCTGGGGCAGGCCGCATCTGGCTG...CGCCCCCATAATCACCTCAAGACATGAGCTGCTGAGCTCCCTTGCTGACCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGTGAGCCTAGGCACAACCCAGTTGCTTaGAGACCACTTGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GETVKVGAVHQGVNSEPRHNPVA*RPLGPP Trigger: AGGAGGACCAAGTGGTCTGCAAGCAACTGGGTTGTG...CCTAGGCTCACTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGTCAGCAAGGGAGCTCAGCAGCTCATGTCTTGAGGTGATTATGGGGGCGTGCTTGCAGACCACTTaGTCCTCCTTTTCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERSARELSSSCLEVIMGACLQTT*SSFSPQ Trigger: CTGGGGAGAAAAGGAGGACCAAGTGGTCTGCAAGCA...CGCCCCCATAATCACCTCAAGACATGAGCTGCTGAGCTCCCTTGCTGACCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACGACTCCACATCTTCCTTGTaGGTACAGTCGTGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVVKLWTKQPLPKAHSNDSTSSL*VQSWYP Trigger: GGGGTACCACGACTGTACCCACAAGGAAGATGTGGA...GTCGTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGATCCCTAAGGCCCCACCTCAGAATACTGTTGCATTAGACATCAAACTTCGCCCACACCCGAGCTaGCTGCACACCACCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWIPKAPPQNTVALDIKLRPHPS*LHTTFE Trigger: CTCAAAGGTGGTGTGCAGGCAGCTCGGGTGTGGGCG...AAGTTTGATGTCTAATGCAACAGTATTCTGAGGTGGGGCCTTAGGGATCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGTGAACAGTGAGCCTAGGGCAGCTGGAAAGGTCAGCAAGGGAGCTCAGCCACTAGCTGCACTTTaGTTGGAGACTCTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGVNSEPRAAGKVSKGAQPLAAL*LETLKN Trigger: GTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGG...CTGAGCTCCCTTGCTGACCTTTCCAGCTGCCCTAGGCTCACTGTTCACTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAAGTGTTCCTCATGTTGTCACATCCTCAGTGGTGTTCACAGACAGGCTGGCACCTCCCACTAGCTaGACTTTGGTTGGAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPHVVTSSVVFTDRLAPPTS*TLVGDS Trigger: AGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGC...CAGCCTGTCTGTGAACACCACTGAGGATGTGACAACATGAGGAACACTTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACTTGCAGTCAACCCCTTaGATAAGAACTCTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REVVKLWTKQPLPKAHSNLQSTP*IRTLCS Trigger: AGAGCAAAGAGTTCTTATTCAAGGGGTTGACTGCAA...GTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGTGAGCCTAGGACACATCAAAGTCTGTaGAGATCACCTCCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GETVKVGAVHQGVNSEPRTHQSL*RSPPHL Trigger: AAGATGTGGAGGTGATCTGCACAGACTTTGATGTGT...CCTAGGCTCACTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGTTGTCACATCCTCAGTGGTGTTCACAGACAGGCTGTGTCTTAGTCCTGTCTTGCCCATCCAGATaGGTCCTTTGCCCTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LMLSHPQWCSQTGCVLVLSCPSR*VLCPEY Trigger: ATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGA...CAGGACTAAGACACAGCCTGTCTGTGAACACCACTGAGGATGTGACAACATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGTCAGCAAGGGAGCTCAGCAGCTCATGTCTTGAGGTGATTATGGGGGCGTTTGGTTGGAGACTCTaGAAAACACGATCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERSARELSSSCLEVIMGAFGWRL*KTRSNK Trigger: TTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAA...CGCCCCCATAATCACCTCAAGACATGAGCTGCTGAGCTCCCTTGCTGACCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGTGGTCAAGCTGTGGACAAAACAGCCCCTTCCAAAGGCACACTCCAACAGCATCTTCTTCATGTaGGCAGTCAAAAACATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: REVVKLWTKQPLPKAHSNSIFFM*AVKNIV Trigger: TACGATGTTTTTGACTGCTCACATGAAGAAGATGCT...GTTGGAGTGTGCCTTTGGAAGGGGCTGTTTTGTCCACAGCTTGACCACCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACCACCCTGCTGCTTTCTCTGAGAGAAGCAGAGTAGTGAAGTGTTATTGGGTTCTCACACTGTaGCCCAGCATCTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGNHPAAFSERSRVVKCYWVLTL*PSIFFM Trigger: CATGAAGAAGATGCTGGGGCACAGTGTGAGAACCCA...ATAACACTTCACTACTCTGCTTCTCTCAGAGAAAGCAGCAGGGTGGTTTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGATCCCTAAGGCCCCACCTCAGAATACTGTTGCATTAGACATCAAACTTGTTTTGGGGGATGGATaGAGGGACTTCCCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SWIPKAPPQNTVALDIKLVLGDG*RDFPQP Trigger: GGGTTGTGGGAAGTCCCTCCATCCATCCCCCAAAAC...AAGTTTGATGTCTAATGCAACAGTATTCTGAGGTGGGGCCTTAGGGATCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACCACCCTGCTGCTTTCTCTGAGAGAAGCAGAGTAGTGAAGTGTTATGCAAGACCGAAGGTTTaGTTCTTGTCCAGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: AGNHPAAFSERSRVVKCYARPKV*FLSRTR Trigger: TCGTGTTCTGGACAAGAAGCAAACCTTCGGTCTTGC...ATAACACTTCACTACTCTGCTTCTCTCAGAGAAAGCAGCAGGGTGGTTTCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAAGTGTTCCTCATGTTGTCACATCCTCAGTGGTGTTCACAGACAGGCTGACGATCCAACAAAAATaGTCAAGATGGCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPHVVTSSVVFTDRLTIQQK*SRWPAS Trigger: TGATGCTGGCCATCTTGAGCATTTTTGTTGGATCGT...CAGCCTGTCTGTGAACACCACTGAGGATGTGACAACATGAGGAACACTTGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 90 bp | TGTAAGTTCCAGCCTGCTTTACACACAGTGCTCCACTGGGACTGGTaGAGCACCTCCACTCGACCCTGGCAGTGCCCCGGGCCATCTACT | + |
|
Preference number: 5 (lower is better) Translates to: CKFQPALHTVLHWDW*STSTRPWQCPGPST Trigger: AGTAGATGGCCCGGGGCACTGCCAGGGTCGAGTGGAGGTGCTCCACCAGTCCCAGTGGAGCACTGTGTGTAAAGCAGGCTGGAACTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 90 bp | TTTGAGACCTGTAAGTTCCAGCCTGCTTTACACACAGTGCTCCACTaGGACTGGTGGAGCACCTCCACTCGACCCTGGCAGTGCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FETCKFQPALHTVLH*DWWSTSTRPWQCPG Trigger: CCCGGGGCACTGCCAGGGTCGAGTGGAGGTGCTCCACCAGTCCCAGTGGAGCACTGTGTGTAAAGCAGGCTGGAACTTACAGGTCTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGTGAGCCTAGGGTCCCCCACTGGCCATaGTGTTCCACCTCCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GETVKVGAVHQGVNSEPRVPHWP*CSTSTR Trigger: GCGAGTGGAGGTGGAACACAATGGCCAGTGGGGGAC...CCTAGGCTCACTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 90 bp | CCCCACTGGCCATTGTGTTCCACCTCCACTCGCCCTTCACAGCGGTaGGCACCTCCCACTAGCTGCACTTTGGTTGGAGACTCTGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PHWPLCSTSTRPSQR*APPTSCTLVGDSEK Trigger: TTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGGGCGAGTGGAGGTGGAACACAATGGCCAGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTGGGGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGGCCTGCACACCACCTTaGAGACCTGTAAGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLGRDSKGGGCSPRSEQACTPP*RPVSSS Trigger: GCTGGAACTTACAGGTCTCAAAGGTGGTGTGCAGGC...CTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCCCCAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTGGGGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGCTTCCCACAACCCAGTaGCTTGCAGACCACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLGRDSKGGGCSPRSEQLPTTQ*LADHLV Trigger: GACCAAGTGGTCTGCAAGCAACTGGGTTGTGGGAAG...CTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCCCCAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | ACACCACCTTTGAGACCTGTAAGTTCCAGCCTGCTTTACACACAGTaGTCCACTGGGACTGGTGGAGCACCTCCACTCGACCCTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPPLRPVSSSLLYTQ*STGTGGAPPLDPGS Trigger: ACTGCCAGGGTCGAGTGGAGGTGCTCCACCAGTCCCAGTGGAGCACTGTGTGTAAAGCAGGCTGGAACTTACAGGTCTCAAAGGTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | TGCAGCTTCCGTAGGTCAGTAATGCCCGCCCACACCCGAGCTGCCTaGACACCACCTTTGAGACCTGTAAGTTCCAGCCTGCTTTACACA | + |
|
Preference number: 5 (lower is better) Translates to: CSFRRSVMPAHTRAA*TPPLRPVSSSLLYT Trigger: TGTGTAAAGCAGGCTGGAACTTACAGGTCTCAAAGGTGGTGTGCAGGCAGCTCGGGTGTGGGCGGGCATTACTGACCTACGGAAGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | ACATCTTGCCCATCCAGATGGGTCCTTTGCCCTGAGTATTCTTGTTaGAGCTTCCGTAGGTCAGTAATGCCCGCCCACACCCGAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSCPSRWVLCPEYSC*SFRRSVMPAHTRAA Trigger: GGCAGCTCGGGTGTGGGCGGGCATTACTGACCTACGGAAGCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | TCCACATCTTCCTTGTGGGTACAGTCGTGGTACCCCCACAACCTGTaGCGGCAGAACTCCAGAGACTGTTCCTTCCCTGAGCAGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: STSSLWVQSWYPHNL*RQNSRDCSFPEQLT Trigger: CGTCAACTGCTCAGGGAAGGAACAGTCTCTGGAGTTCTGCCGGCACAGGTTGTGGGGGTACCACGACTGTACCCACAAGGAAGATGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 90 bp | AAGTCTGTGCAGATCACCTCCACATCTTCCTTGTGGGTACAGTCGTaGTACCCCCACAACCTGTGCCGGCAGAACTCCAGAGACTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSVQITSTSSLWVQS*YPHNLCRQNSRDCS Trigger: GGAACAGTCTCTGGAGTTCTGCCGGCACAGGTTGTGGGGGTACCACGACTGTACCCACAAGGAAGATGTGGAGGTGATCTGCACAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGTGAACAGTGAGCCTAGGGCAGCTGGAAAGGTCAGCAAGGGAGCTCAGTTGCTTGCAGACCACTaGGTCCTCCTTTTCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGVNSEPRAAGKVSKGAQLLADH*VLLFSP Trigger: TGGGGAGAAAAGGAGGACCAAGTGGTCTGCAAGCAA...CTGAGCTCCCTTGCTGACCTTTCCAGCTGCCCTAGGCTCACTGTTCACTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | TCCACCTCCACTCGCCCTTCACAGCGGTGGGCACCTCCCACTAGCTaGACTTTGGTTGGAGACTCTGAAAAACACGATCCAACAAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: STSTRPSQRWAPPTS*TLVGDSEKHDPTKM Trigger: CATTTTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGGGCGAGTGGAGGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGTGAACAGTGAGCCTAGGGCAGCTGGAAAGGTCAGCAAGGGAGCTCAGTCGCCATGGGTACAGTaGTTCTCCAAACGACTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGVNSEPRAAGKVSKGAQSPWVQ*FSKRLK Trigger: TTTGAGTCGTTTGGAGAACAACTGTACCCATGGCGA...CTGAGCTCCCTTGCTGACCTTTCCAGCTGCCCTAGGCTCACTGTTCACTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGACAGTAAAGGTGGGGGCTGTTCACCAAGGAGTGAACAGTGAGCCTAGGCTAGCTGCACTTTGGTaGGAGACTCTGAAAAACACG | + |
|
Preference number: 5 (lower is better) Translates to: GETVKVGAVHQGVNSEPRLAALW*ETLKNT Trigger: CGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAG...CCTAGGCTCACTGTTCACTCCTTGGTGAACAGCCCCCACCTTTACTGTCTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | CTTCTTGTCCAGAACACGACATCTTGCCCATCCAGATGGGTCCTTTaGCCTGAGTATTCTTGTTGCAGCTTCCGTAGGTCAGTAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVQNTTSCPSRWVL*PEYSCCSFRRSVMP Trigger: GGGCATTACTGACCTACGGAAGCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGATGTCGTGTTCTGGACAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCAAGTGTTCCTCATGTTGTCACATCCTCAGTGGTGTTCACAGACAGGCTGGGCAAGACCGAAGGTTaGCTTCTTGTCCAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVPHVVTSSVVFTDRLGKTEG*LLVQNT Trigger: CGTGTTCTGGACAAGAAGCAAACCTTCGGTCTTGCC...CAGCCTGTCTGTGAACACCACTGAGGATGTGACAACATGAGGAACACTTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 90 bp | AAAGGCAAGACCGAAGGTTTGCTTCTTGTCCAGAACACGACATCTTaGCCATCCAGATGGGTCCTTTGCCCTGAGTATTCTTGTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGKTEGLLLVQNTTS*PSRWVLCPEYSCCS Trigger: GCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGATGTCGTGTTCTGGACAAGAAGCAAACCTTCGGTCTTGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 90 bp | GAAGGTTTGCTTCTTGTCCAGAACACGACATCTTGCCCATCCAGATaGGTCCTTTGCCCTGAGTATTCTTGTTGCAGCTTCCGTAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLLLVQNTTSCPSR*VLCPEYSCCSFRRS Trigger: TGACCTACGGAAGCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGATGTCGTGTTCTGGACAAGAAGCAAACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGATTAATCCACTCATAAAGACTGAGGGATCAAACCACATGATGCAGTTGACCTCCACATCTTCCTaGTGGGTACAGTCGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PVINPLIKTEGSNHMMQLTSTSS*WVQSWY Trigger: GTACCACGACTGTACCCACAAGGAAGATGTGGAGGT...CAACTGCATCATGTGGTTTGATCCCTCAGTCTTTATGAGTGGATTAATCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGATTAATCCACTCATAAAGACTGAGGGATCAAACCACATGATGCAGTTGGTTGCAGTCAACCCCTaGAATAAGAACTCTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVINPLIKTEGSNHMMQLVAVNP*NKNSLL Trigger: GAGCAAAGAGTTCTTATTCAAGGGGTTGACTGCAAC...CAACTGCATCATGTGGTTTGATCCCTCAGTCTTTATGAGTGGATTAATCACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 72 bp | CGTAGGTCAGTAATGCCCGCCCACACCCGAGCTGCCTaGACACCACCTTTGAGACCTGTAAGTTCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRSVMPAHTRAA*TPPLRPVSSSL Trigger: CAGGCTGGAACTTACAGGTCTCAAAGGTGGTGTGCAGGCAGCTCGGGTGTGGGCGGGCATTACTGACCTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 72 bp | CCATTGTGTTCCACCTCCACTCGCCCTTCACAGCGGTaGGCACCTCCCACTAGCTGCACTTTGGTTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLCSTSTRPSQR*APPTSCTLVGD Trigger: GTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGGGCGAGTGGAGGTGGAACACAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS TCA 72 bp | GCCCCGGGCCATCTACTAGACGCACATCCTCTGGAATaGAGAGGAGGTCACTGTCTGGGTTCTCACACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: APGHLLDAHPLE*RGGHCLGSHTV Trigger: CACAGTGTGAGAACCCAGACAGTGACCTCCTCTTCATTCCAGAGGATGTGCGTCTAGTAGATGGCCCGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CCA 72 bp | CAGATCACCTCCACATCTTCCTTGTGGGTACAGTCGTaGTACCCCCACAACCTGTGCCGGCAGAACTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QITSTSSLWVQS*YPHNLCRQNSR Trigger: TCTGGAGTTCTGCCGGCACAGGTTGTGGGGGTACCACGACTGTACCCACAAGGAAGATGTGGAGGTGATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 72 bp | TTGAGACCTGTAAGTTCCAGCCTGCTTTACACACAGTaGTCCACTGGGACTGGTGGAGCACCTCCACTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRPVSSSLLYTQ*STGTGGAPPLD Trigger: GTCGAGTGGAGGTGCTCCACCAGTCCCAGTGGAGCACTGTGTGTAAAGCAGGCTGGAACTTACAGGTCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 72 bp | CCATCCAGATGGGTCCTTTGCCCTGAGTATTCTTGTTaGAGCTTCCGTAGGTCAGTAATGCCCGCCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: PSRWVLCPEYSC*SFRRSVMPAHT Trigger: GGTGTGGGCGGGCATTACTGACCTACGGAAGCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 72 bp | GGGATGGATGGAGGGACTTCCCACAACCCAGTTGCTTaGAGACCACTTGGTCCTCCTTTTCTCCCCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GMDGGTSHNPVA*RPLGPPFLPSC Trigger: ACAACTGGGGAGAAAAGGAGGACCAAGTGGTCTGCAAGCAACTGGGTTGTGGGAAGTCCCTCCATCCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 90 bp | CTCGCCCTTCACAGCGGTGGGCACCTCCCACTAGCTGCACTTTGGTaGGAGACTCTGAAAAACACGATCCAACAAAAATGCTCAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LALHSGGHLPLAALW*ETLKNTIQQKCSRW Trigger: CCATCTTGAGCATTTTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGGGCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 90 bp | TCCACTCGCCCTTCACAGCGGTGGGCACCTCCCACTAGCTGCACTTaGGTTGGAGACTCTGAAAAACACGATCCAACAAAAATGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: STRPSQRWAPPTSCT*VGDSEKHDPTKMLK Trigger: CTTGAGCATTTTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGGGCGAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS GCA 72 bp | CAGAACACGACATCTTGCCCATCCAGATGGGTCCTTTaGCCTGAGTATTCTTGTTGCAGCTTCCGTAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QNTTSCPSRWVL*PEYSCCSFRRS Trigger: TGACCTACGGAAGCTGCAACAAGAATACTCAGGGCAAAGGACCCATCTGGATGGGCAAGATGTCGTGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 72 bp | CACAGCGGTGGGCACCTCCCACTAGCTGCACTTTGGTaGGAGACTCTGAAAAACACGATCCAACAAAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: HSGGHLPLAALW*ETLKNTIQQKC Trigger: GCATTTTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 72 bp | CCTTCACAGCGGTGGGCACCTCCCACTAGCTGCACTTaGGTTGGAGACTCTGAAAAACACGATCCAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSQRWAPPTSCT*VGDSEKHDPTK Trigger: TTTTGTTGGATCGTGTTTTTCAGAGTCTCCAACCAAAGTGCAGCTAGTGGGAGGTGCCCACCGCTGTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 90 bp | GGGTACAGTTGTTCTCCAAACGACTCAAAAGGCAAGACCGAAGGTTaGCTTCTTGTCCAGAACACGACATCTTGCCCATCCAGATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GYSCSPNDSKGKTEG*LLVQNTTSCPSRWV Trigger: GACCCATCTGGATGGGCAAGATGTCGTGTTCTGGACAAGAAGCAAACCTTCGGTCTTGCCTTTTGAGTCGTTTGGAGAACAACTGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 72 bp | TCACATTCCATCCATGTGTCCTCGCCATGGGTACAGTaGTTCTCCAAACGACTCAAAAGGCAAGACCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHSIHVSSPWVQ*FSKRLKRQDRR Trigger: CCTTCGGTCTTGCCTTTTGAGTCGTTTGGAGAACAACTGTACCCATGGCGAGGACACATGGATGGAATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 72 bp | TGTTCTCCAAACGACTCAAAAGGCAAGACCGAAGGTTaGCTTCTTGTCCAGAACACGACATCTTGCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CSPNDSKGKTEG*LLVQNTTSCPS Trigger: GGATGGGCAAGATGTCGTGTTCTGGACAAGAAGCAAACCTTCGGTCTTGCCTTTTGAGTCGTTTGGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||
| CDS CAA 90 bp | AAAGGATCTTCACATTCCATCCATGTGTCCTCGCCATGGGTACAGTaGTTCTCCAAACGACTCAAAAGGCAAGACCGAAGGTTTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KGSSHSIHVSSPWVQ*FSKRLKRQDRRFAS Trigger: AGAAGCAAACCTTCGGTCTTGCCTTTTGAGTCGTTTGGAGAACAACTGTACCCATGGCGAGGACACATGGATGGAATGTGAAGATCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015998.8 |
||