Pregenerated sensors for CD59B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068686Ensembl transcript IDs: ENSMUST00000090429.8, ENSMUST00000111130.3, ENSMUST00000111131.9, ENSMUST00000111132.8, ENSMUST00000129749.8
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTCTACCCTCCTACTTCACTCTGTAACTGCAAGTGGGCTCTCCTaGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: CSTLLLHSVTASGLS*CAWCSSTLLKLHPL Trigger: AAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTGAAGTAGGAGGGTAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR CCA 90 bp | CTCCTACTTCACTCTGTAACTGCAAGTGGGCTCTCCTGGTGTGCATaGTGCTCTTCCACACTGCTTAAACTCCACCCTCTTATCCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LLLHSVTASGLSWCA*CSSTLLKLHPLIQD Trigger: ATCTTGGATAAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTGAAGTAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR GCA 90 bp | CTACTTCACTCTGTAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTaGTCTTCCACACTGCTTAAACTCCACCCTCTTATCCAAGATGTT | + |
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Preference number: 1 (lower is better) Translates to: LLHSVTASGLSWCAW*SSTLLKLHPLIQDV Trigger: AACATCTTGGATAAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTGAAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCCTCAAGGCTTTAGAGTGCTaGAGTAGCAGGAAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VGSPGVHGALPHCLNSTLKALEC*SSRKRE Trigger: CTCTCTTTTCCTGCTACTGCAGCACTCTAAAGCCTT...GAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTGGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACATAAAGGCTTTAGAGTaGTGCAGTAGCAGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASGLSWCAWCSSTLLKLHIKALE*CSSRKR Trigger: TCTTTTCCTGCTACTGCAGCACTCTAAAGCCTTTAT...GTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCCTCTTATCCAAGATGTTAAGGCTTTAGAGTGCTaGAGTAGCAGGAAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CAWCSSTLLKLHPLIQDVKALEC*SSRKRE Trigger: CTCTCTTTTCCTGCTACTGCAGCACTCTAAAGCCTT...AACATCTTGGATAAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 |
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| 3UTR CCA 72 bp | CACTCTGTAACTGCAAGTGGGCTCTCCTGGTGTGCATaGTGCTCTTCCACACTGCTTAAACTCCACCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: HSVTASGLSWCA*CSSTLLKLHPL Trigger: AAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR CCA 72 bp | GTGTTCTACCCTCCTACTTCACTCTGTAACTGCAAGTaGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACT | + |
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Preference number: 3 (lower is better) Translates to: VFYPPTSLCNCK*ALLVCMVLFHT Trigger: AGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTGAAGTAGGAGGGTAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| 3UTR CCA 72 bp | CTCCTACTTCACTCTGTAACTGCAAGTGGGCTCTCCTaGTGTGCATGGTGCTCTTCCACACTGCTTAAACTC | + |
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Preference number: 3 (lower is better) Translates to: LLLHSVTASGLS*CAWCSSTLLKL Trigger: GAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTACAGAGTGAAGTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| CDS-3UTR GCA 90 bp | TGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCGCAGGTTCCAGCAGTGGGCGTAGCTGGACCTTCCCCTaGAGTGCTCTCTGCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: WSSRKVHVCGSAGSSSGRSWTFP*SALCTK Trigger: CTTGGTGCAGAGAGCACTGCAGGGGAAGGTCCAGCT...ACGCCCACTGCTGGAACCTGCGGAGCCACACACGTGCACCTTTCTACTGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111131.9 |
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| CDS-3UTR TCA 90 bp | GGACCCGATTCCCGCCGAATAATCTCTGGTCCAGTAGAAAGGTGCACGTGTGTGCAGTATGCACAGTTCTaGGTGCTGTGCAGCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GPDSRRIISGPVERCTCVQYAQF*VLCSSG Trigger: GCCGGAGCTGCACAGCACTCAGAACTGTGCATACTG...CACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGGGAATCGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111131.9 |
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| CDS-3UTR GCA 90 bp | AGGGGACCCGATTCCCGCCGAATAATCTCTGGTCCAGTAGAAAGGTGCACGTGTGACCTTCCCCTGCAGTaGTCTCTGCACCAAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: RGPDSRRIISGPVERCTCDLPLQ*SLHQAM Trigger: CATCGCTTGGTGCAGAGAGCACTGCAGGGGAAGGTC...ACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGGGAATCGGGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111131.9 |
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| CDS-3UTR GCA 90 bp | GACACTAGTTATGAAGGAAGGGGGAGGGGACCCGATTCCCGCCGAATAATCTCTGATCACAAACCAGTATaGACAGTTCTGAGTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DTSYEGRGRGPDSRRIISDHKPV*TVLSAV Trigger: CACAGCACTCAGAACTGTGCATACTGGTTTGTGATC...AGAGATTATTCGGCGGGAATCGGGTCCCCTCCCCCTTCCTTCATAACTAGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111131.9 |
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| CDS-3UTR CCA 90 bp | TGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCCTCTTATCCAAGATGTTAGCAAAACTTCAAAATaGCCACCAGAACTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CAWCSSTLLKLHPLIQDVSKTSK*PPELRS Trigger: GGACCTCAGTTCTGGTGGCCATTTTGAAGTTTTGCT...AACATCTTGGATAAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 |
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| CDS-3UTR CCA 90 bp | TGGAAAATAATAAAGGCTTTAGAGTGCTGCAGTAGCAGGAAAAGAGAGACAGAGAGCAAAACTTCAAAATaGCCACCAGAACTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WKIIKALECCSSRKRETESKTSK*PPELRS Trigger: GGACCTCAGTTCTGGTGGCCATTTTGAAGTTTTGCT...CTCTGTCTCTCTTTTCCTGCTACTGCAGCACTCTAAAGCCTTTATTATTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 |
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| CDS-3UTR CAA 90 bp | CTCTGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCGCAGGTTCCAGCAGTGGGCAAGTAGTGTTTATTTaGCATGAAGAAACCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LWSSRKVHVCGSAGSSSGQVVFI*HEETGS Trigger: AGACCCGGTTTCTTCATGCAAAATAAACACTACTTG...CCCACTGCTGGAACCTGCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111131.9 ENSMUST00000111132.8 |
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| CDS-3UTR CAA 90 bp | TCCCGCCGAATAATCTCTGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCGCAGCAAGTAGTGTTTATTTaGCATGAAGAAACCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRRIISGPVERCTCVAPQQVVFI*HEETGS Trigger: AGACCCGGTTTCTTCATGCAAAATAAACACTACTTG...CTGCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111131.9 ENSMUST00000111132.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCCTCTTATCCAAGAAGTTTCCAACACTGTaGATACACTTGCCTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PGVHGALPHCLNSTLLSKKFPTL*IHLPSG Trigger: GCCGGAAGGCAAGTGTATCAACAGTGTTGGAAACTT...CTTGGATAAGAGGGTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTGGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCACCAAGTAGTGTTTATTTaGCATGAAGAAACCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: ASGLSWCAWCSSTLLKLHQVVFI*HEETGS Trigger: AGACCCGGTTTCTTCATGCAAAATAAACACTACTTG...GTGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090429.8 |
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| CDS-3UTR CAA 90 bp | TGGAAAATAATAAAGGCTTTAGAGTGCTGCAGTAGCAGGAAAAGAGAGACAGAGCAAGTAGTGTTTATTTaGCATGAAGAAACCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: WKIIKALECCSSRKRETEQVVFI*HEETGS Trigger: AGACCCGGTTTCTTCATGCAAAATAAACACTACTTG...CTCTGTCTCTCTTTTCCTGCTACTGCAGCACTCTAAAGCCTTTATTATTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 |
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| CDS CAA 90 bp | CTTCCCCTGCAGTGCTCTCTGCACCAAGCGATGCCCATACTGAATTaGTACGATCACAAACCAGTATGCACAGTTCTGAGTGCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPLQCSLHQAMPILN*YDHKPVCTVLSAVQ Trigger: CTGCACAGCACTCAGAACTGTGCATACTGGTTTGTGATCGTACAAATTCAGTATGGGCATCGCTTGGTGCAGAGAGCACTGCAGGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111131.9 |
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| CDS CAA 90 bp | GAGGTCCCCAGCAATGCTGTCTTCCTCAATGAGGAAGTTTCTGCGTaGTTTGGCTCTTCTAATCCGTCAAGATTTTTGTTACACAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: EVPSNAVFLNEEVSA*FGSSNPSRFLLHKS Trigger: GGACTTGTGTAACAAAAATCTTGACGGATTAGAAGAGCCAAACAACGCAGAAACTTCCTCATTGAGGAAGACAGCATTGCTGGGGACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 ENSMUST00000129749.8 |
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| CDS CAA 90 bp | TCCCCAGCAATGCTGTCTTCCTCAATGAGGAAGTTTCTGCGTTGTTaGGCTCTTCTAATCCGTCAAGATTTTTGTTACACAAGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: SPAMLSSSMRKFLRC*ALLIRQDFCYTSPT Trigger: AGTGGGACTTGTGTAACAAAAATCTTGACGGATTAGAAGAGCCAAACAACGCAGAAACTTCCTCATTGAGGAAGACAGCATTGCTGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 ENSMUST00000129749.8 |
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| CDS CAA 90 bp | GCTCATAATATAGTTGGAATTACAATCCGAAAGTTTCCAACACTGTaGATACACTTGCCTTCCGGCTACAGCATAGAGACAGGAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: AHNIVGITIRKFPTL*IHLPSGYSIETGIQ Trigger: CTGGATTCCTGTCTCTATGCTGTAGCCGGAAGGCAAGTGTATCAACAGTGTTGGAAACTTTCGGATTGTAATTCCAACTATATTATGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 ENSMUST00000129749.8 |
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| CDS CAA 72 bp | ATAGTTGGAATTACAATCCGAAAGTTTCCAACACTGTaGATACACTTGCCTTCCGGCTACAGCATAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: IVGITIRKFPTL*IHLPSGYSIET Trigger: TGTCTCTATGCTGTAGCCGGAAGGCAAGTGTATCAACAGTGTTGGAAACTTTCGGATTGTAATTCCAACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 ENSMUST00000129749.8 |
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| CDS CAA 72 bp | ATGCTGTCTTCCTCAATGAGGAAGTTTCTGCGTTGTTaGGCTCTTCTAATCCGTCAAGATTTTTGTTACACA | + |
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Preference number: 6 (lower is better) Translates to: MLSSSMRKFLRC*ALLIRQDFCYT Trigger: TGTGTAACAAAAATCTTGACGGATTAGAAGAGCCAAACAACGCAGAAACTTCCTCATTGAGGAAGACAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090429.8 ENSMUST00000111130.3 ENSMUST00000129749.8 |
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