Pregenerated sensors for CD59A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032679Ensembl transcript IDs: ENSMUST00000040423.12, ENSMUST00000168176.8
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATaGTGCTCTTCCACACTGCTTAAACTCCTCCCTCTTGTCCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LRLHSATASGLSWCA*CSSTLLKLLPLVQD Trigger: ATCTTGGACAAGAGGGAGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 90 bp | TGTTCTACCCTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTaGTGTGCATGGTGCTCTTCCACACTGCTTAAACTCCTCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: CSTLRLHSATASGLS*CAWCSSTLLKLLPL Trigger: AAGAGGGAGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGGGTAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 90 bp | CTAAAGCTGAAAGCACAGCGGTTCATTCACTGCTTGAGCTGGGGCTaGGGCTTAAGGGTAAAGCACTCGCCTACAAGCCAAGATCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: LKLKAQRFIHCLSWG*GLRVKHSPTSQDLG Trigger: GCCCAGATCTTGGCTTGTAGGCGAGTGCTTTACCCTTAAGCCCCAGCCCCAGCTCAAGCAGTGAATGAACCGCTGTGCTTTCAGCTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR GCA 90 bp | GGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTaGCTCCTGAGTACTGAGATACTAAGCAAAGGAAGCAAGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: GGLETTFNFWPSSCL*LLSTEILSKGSKYH Trigger: ATGGTACTTGCTTCCTTTGCTTAGTATCTCAGTACTCAGGAGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR GCA 90 bp | GTTTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTaGCTCTGCCTCCTGAGTACTGAGATACTAAGCAAAGGAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VLGGLETTFNFWPSS*LCLLSTEILSKGSK Trigger: CTTGCTTCCTTTGCTTAGTATCTCAGTACTCAGGAGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTGCCTCAGCGGTTCATTCACTaGTTGAGCTGGGGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FRWPGNHLQFLAILLPLPQRFIH*LSWGWG Trigger: GCCCCAGCCCCAGCTCAAGCAGTGAATGAACCGCTG...AGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | CACCAGCTCAGGGCCTGTGAAGATTATGAAAGCATTTTGAGCGTGTCAGAGTGGCCTCCGCCTTCACTCTaGAACTGCAAGTGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HQLRACEDYESILSVSEWPPPSL*NCKWAL Trigger: GAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGG...CCACTCTGACACGCTCAAAATGCTTTCATAATCTTCACAGGCCCTGAGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | TACCCTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTGAAAGCTTTAGACTACTaGAGCAGCAGGAAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: YPPPSLCNCKWALLVCMVKALDY*SSRKRE Trigger: CTCTCTTTTCCTGCTGCTGCAGTAGTCTAAAGCTTT...CACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGCGTGTCAGAGTGGTAAAGAGAATCCTCCTGGCCCACTCACTCCTAAAGCTCTGCAACTGCAAGTaGGCTCTCCTGGTGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: FERVRVVKRILLAHSLLKLCNCK*ALLVCM Trigger: CATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAG...CTTTAGGAGTGAGTGGGCCAGGAGGATTCTCTTTACCACTCTGACACGCTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTGCCTATGGCCAGCACTGGTTaGTTGGTTGGTTGGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FRWPGNHLQFLAILLPLPMASTG*LVGWLV Trigger: AACCAACCAACCAACCAACCAACCAGTGCTGGCCAT...AGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTGCCTACTCCTCAGCTACATTaGAGGAACCAGAGAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: FRWPGNHLQFLAILLPLPTPQLH*RNQRAI Trigger: GATAGCTCTCTGGTTCCTGCAATGTAGCTGAGGAGT...AGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | CACCAGCTCAGGGCCTGTGAAGATTATGAAAGCATTTTGAGCGTGTCAGAGTGGTCCTGGTGTGCATGGTaGTCTTCCACACTGCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: HQLRACEDYESILSVSEWSWCAW*SSTLLK Trigger: TTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGA...CCACTCTGACACGCTCAAAATGCTTTCATAATCTTCACAGGCCCTGAGCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR TCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAGTCACTGCCCCTAACTaGCAGCTCACAACTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRVTAPN*QLTTGT Trigger: TGTTCCAGTTGTGAGCTGTCAGTTAGGGGCAGTGAC...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAAAGATCTGGGCTTCATaGCCAGCACTGGTTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRKIWAS*PALVGW Trigger: CCAACCAACCAGTGCTGGCCATGAAGCCCAGATCTT...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTCTACAAGCCAAGATCTaGGCTTCATGGCCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: KQRKQVPSHGVQSLFHFPLQAKI*ASWPAL Trigger: CAGTGCTGGCCATGAAGCCCAGATCTTGGCTTGTAG...AGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAATGGCCAGCACTGGTTaGTTGGTTGGTTGGTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRMASTG*LVGWLV Trigger: AACCAACCAACCAACCAACCAACCAGTGCTGGCCAT...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTCTTCATGGCCAGCACTaGTTGGTTGGTTGGTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: KQRKQVPSHGVQSLFHFPLHGQH*LVGWLV Trigger: AACCAACCAACCAACCAACCAGTGCTGGCCATGAAG...AGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGACTTCATGGCCAGCACTaGTTGGTTGGTTGGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRLHGQH*LVGWLV Trigger: AACCAACCAACCAACCAACCAGTGCTGGCCATGAAG...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTTCACTCCTAAAGGTCTaGTCTCACTCCTCAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: KQRKQVPSHGVQSLFHFPSLLKV*SHSSAT Trigger: TGTAGCTGAGGAGTGAGATCAGACCTTTAGGAGTGA...AGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTATCACTCCTAAAGGTCTaGTCTCACTCCTCAGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: SKGSKYHHMGFRACFISLSLLKV*SHSSAT Trigger: TGTAGCTGAGGAGTGAGATCAGACCTTTAGGAGTGA...TAGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGATCCTGGTGTGCATGGTaGTCTTCCACACTGCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRSWCAW*SSTLLK Trigger: TTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGA...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAACTCCTCAGCTACATTaGAGGAACCAGAGAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRTPQLH*RNQRAI Trigger: GATAGCTCTCTGGTTCCTGCAATGTAGCTGAGGAGT...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR GCA 90 bp | ACATTCACACACCAGCTCAGGGCCTGTGAAGATTATGAAAGCATTTTGAGCGTGAAAGCTTTAGACTACTaGAGCAGCAGGAAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TFTHQLRACEDYESILSVKALDY*SSRKRE Trigger: CTCTCTTTTCCTGCTGCTGCAGTAGTCTAAAGCTTT...CACGCTCAAAATGCTTTCATAATCTTCACAGGCCCTGAGCTGGTGTGTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAGCAAGTACCATCACATaGGGTTCAGAGCTTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: QYSEMWDIQVVAASTSIRASTIT*GSELVS Trigger: TGAAACAAGCTCTGAACCCCATGTGATGGTACTTGC...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTAATTATGAAAGCATTTTaGGCGTGTCAGAGTGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: SKGSKYHHMGFRACFISLIMKAF*ACQSGK Trigger: TTTACCACTCTGACACGCTCAAAATGCTTTCATAAT...TAGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 72 bp | GTGTTCTACCCTCCGCCTTCACTCTGCAACTGCAAGTaGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACT | + |
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Preference number: 3 (lower is better) Translates to: VFYPPPSLCNCK*ALLVCMVLFHT Trigger: AGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGGGTAGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 72 bp | CTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTaGTGTGCATGGTGCTCTTCCACACTGCTTAAACTC | + |
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Preference number: 3 (lower is better) Translates to: LRLHSATASGLS*CAWCSSTLLKL Trigger: GAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR GCA 72 bp | TCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTaGTCTTCCACACTGCTTAAACTCCTCCCTCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: SATASGLSWCAW*SSTLLKLLPLV Trigger: GACAAGAGGGAGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 72 bp | CACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATaGTGCTCTTCCACACTGCTTAAACTCCTCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: HSATASGLSWCA*CSSTLLKLLPL Trigger: AAGAGGGAGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 72 bp | AAAGCACAGCGGTTCATTCACTGCTTGAGCTGGGGCTaGGGCTTAAGGGTAAAGCACTCGCCTACAAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: KAQRFIHCLSWG*GLRVKHSPTSQ Trigger: TTGGCTTGTAGGCGAGTGCTTTACCCTTAAGCCCCAGCCCCAGCTCAAGCAGTGAATGAACCGCTGTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CCA 72 bp | AAGCTGAAAGCACAGCGGTTCATTCACTGCTTGAGCTaGGGCTGGGGCTTAAGGGTAAAGCACTCGCCTACA | + |
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Preference number: 3 (lower is better) Translates to: KLKAQRFIHCLS*GWGLRVKHSPT Trigger: TGTAGGCGAGTGCTTTACCCTTAAGCCCCAGCCCCAGCTCAAGCAGTGAATGAACCGCTGTGCTTTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR GCA 72 bp | GTGGGCTCTCCTGGTGTGCATGGTGCTCTTCCACACTaGTTAAACTCCTCCCTCTTGTCCAAGATGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: VGSPGVHGALPH*LNSSLLSKMFK Trigger: CTTGAACATCTTGGACAAGAGGGAGGAGTTTAAGCAGTGTGGAAGAGCACCATGCACACCAGGAGAGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR TCA 72 bp | AAGAGAATCCTCCTGGCCCACTCACTCCTAAAGGTCTaGTCTCACTCCTCAGCTACATTGCAGGAACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: KRILLAHSLLKV*SHSSATLQEPE Trigger: CTCTGGTTCCTGCAATGTAGCTGAGGAGTGAGATCAGACCTTTAGGAGTGAGTGGGCCAGGAGGATTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CAA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGACGGTTCATTCACTGCTaGAGCTGGGGCTGGGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: QYSEMWDIQVVAASTSIRRFIHC*SWGWGL Trigger: TAAGCCCCAGCCCCAGCTCAAGCAGTGAATGAACCG...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR GCA 72 bp | GAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTaGCTCCTGAGTACTGAGATACTAAGCAAAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: ETTFNFWPSSCL*LLSTEILSKGS Trigger: GCTTCCTTTGCTTAGTATCTCAGTACTCAGGAGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTACATGGCCAGCACTGGTaGGTTGGTTGGTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SKGSKYHHMGFRACFISLHGQHW*VGWLVG Trigger: ACCAACCAACCAACCAACCAACCAGTGCTGGCCATG...TAGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTCATGGCCAGCACTGGTaGGTTGGTTGGTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: KQRKQVPSHGVQSLFHFPHGQHW*VGWLVG Trigger: ACCAACCAACCAACCAACCAACCAGTGCTGGCCATG...AGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR TCA 72 bp | ACCAGCTCAGGGCCTGTGAAGATTATGAAAGCATTTTaGGCGTGTCAGAGTGGTAAAGAGAATCCTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TSSGPVKIMKAF*ACQSGKENPPG Trigger: GCCAGGAGGATTCTCTTTACCACTCTGACACGCTCAAAATGCTTTCATAATCTTCACAGGCCCTGAGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CCA 90 bp | TCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTGCTCTTCGAGGTCCCCAGCAATaGTGTCTTCCCCAAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SAFTLQLQVGSPGVHGALRGPQQ*CLPQGS Trigger: GGATCCTTGGGGAAGACACCATTGCTGGGGACCTCG...AAGAGCACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR GCA 90 bp | TACCCTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTGGGTCAGGAGAGCAAGTaGTGTTCATATTGCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: YPPPSLCNCKWALLVCMVGQESK*CSYCMK Trigger: CTTCATGCAATATGAACAGCACTTGCTCTCCTGACC...CACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGCGTGTCAGAGTGGTAAAGAGAATCCTCCTGGCCCACTCACTCCTAAAGCGAGGTCCCCAGCAATaGTGTCTTCCCCAAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: FERVRVVKRILLAHSLLKRGPQQ*CLPQGS Trigger: GGATCCTTGGGGAAGACACCATTGCTGGGGACCTCG...CTTTAGGAGTGAGTGGGCCAGGAGGATTCTCTTTACCACTCTGACACGCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR GCA 90 bp | TTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTGCCTGGTCAGGAGAGCAAGTaGTGTTCATATTGCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: FRWPGNHLQFLAILLPLPGQESK*CSYCMK Trigger: CTTCATGCAATATGAACAGCACTTGCTCTCCTGACC...AGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CCA 90 bp | TACCCTCCGCCTTCACTCTGCAACTGCAAGTGGGCTCTCCTGGTGTGCATGGTGTTTGTCTCTTCTAATTaGTCCATAATGATCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: YPPPSLCNCKWALLVCMVFVSSN*SIMISP Trigger: TGGTGAGATCATTATGGACCAATTAGAAGAGACAAA...CACCATGCACACCAGGAGAGCCCACTTGCAGTTGCAGAGTGAAGGCGGAGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR GCA 90 bp | TTTAGGTGGCCTGGAAACCACCTTCAATTTCTGGCCATCCTCCTGCCTCTGCCTAAGTGCTGTTCATATTaGATGAAGAAACCACCGGTT | + |
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Preference number: 4 (lower is better) Translates to: FRWPGNHLQFLAILLPLPKCCSY*MKKPPV Trigger: AACCGGTGGTTTCTTCATGCAATATGAACAGCACTT...AGGCAGAGGCAGGAGGATGGCCAGAAATTGAAGGTGGTTTCCAGGCCACCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGCGTGTCAGAGTGGTAAAGAGAATCCTCCTGGCCCACTCACTCCTAAAGAACAAAGATTCAAAATaGCCACCAGAACCGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FERVRVVKRILLAHSLLKNKDSK*PPEPRS Trigger: GGACCTCGGTTCTGGTGGCCATTTTGAATCTTTGTT...CTTTAGGAGTGAGTGGGCCAGGAGGATTCTCTTTACCACTCTGACACGCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| 3UTR CAA 72 bp | ATTTATTTATTTAGAGGCGGGTTTCTCTGTGTGTCCTaGGCTGTCCTAGAACTGGCTGGCTTCCACCTCACA | + |
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Preference number: 4 (lower is better) Translates to: IYLFRGGFLCVS*AVLELAGFHLT Trigger: TGTGAGGTGGAAGCCAGCCAGTTCTAGGACAGCCAAGGACACACAGAGAAACCCGCCTCTAAATAAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR TCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGATGTTTCCAACACCTTTaGTACACTTGCATTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QYSEMWDIQVVAASTSIRCFQHL*YTCIPA Trigger: AGCCGGAATGCAAGTGTATCAAAGGTGTTGGAAACA...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR TCA 90 bp | AGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTATGTTTCCAACACCTTTaGTACACTTGCATTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKGSKYHHMGFRACFISLCFQHL*YTCIPA Trigger: AGCCGGAATGCAAGTGTATCAAAGGTGTTGGAAACA...TAGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR GCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAAAGTGCTGTTCATATTaGATGAAGAAACCACCGGTT | + |
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Preference number: 4 (lower is better) Translates to: QYSEMWDIQVVAASTSIRKCCSY*MKKPPV Trigger: AACCGGTGGTTTCTTCATGCAATATGAACAGCACTT...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CCA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGATTTGTCTCTTCTAATTaGTCCATAATGATCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QYSEMWDIQVVAASTSIRFVSSN*SIMISP Trigger: TGGTGAGATCATTATGGACCAATTAGAAGAGACAAA...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CAA 90 bp | AGCAAAGGAAGCAAGTACCATCACATGGGGTTCAGAGCTTGTTTCATTTCCCTAAAGGATCCGTCACTTTaGTTACACAAGTTAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: SKGSKYHHMGFRACFISLKDPSL*LHKLNW Trigger: CCAGTTTAACTTGTGTAACAAAAGTGACGGATCCTT...TAGGGAAATGAAACAAGCTCTGAACCCCATGTGATGGTACTTGCTTCCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS-3UTR CAA 90 bp | CAATATTCAGAGATGTGGGACATCCAAGTTGTGGCCGCCAGTACTTCTATAAGAAAGGATCCGTCACTTTaGTTACACAAGTTAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: QYSEMWDIQVVAASTSIRKDPSL*LHKLNW Trigger: CCAGTTTAACTTGTGTAACAAAAGTGACGGATCCTT...TCTTATAGAAGTACTGGCGGCCACAACTTGGATGTCCCACATCTCTGAATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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| CDS GCA 72 bp | AGGAATCCTGGTCAGGAGAGCAAGTGCTGTTCATATTaGATGAAGAAACCACCGGTTGGAAACAGTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RNPGQESKCCSY*MKKPPVGNSGS Trigger: GCTACCACTGTTTCCAACCGGTGGTTTCTTCATGCAATATGAACAGCACTTGCTCTCCTGACCAGGATTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040423.12 ENSMUST00000168176.8 |
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