Pregenerated sensors for CD55B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026401Ensembl transcript IDs: ENSMUST00000112488.9, ENSMUST00000119432.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGGCATTAGGAATGTCTaGAGGTGGGCCGCAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSGIRNV*RWAAVS Trigger: GGAGACTGCGGCCCACCTCCAGACATTCCTAATGCC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR TCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGGGTTTCTGAGGCGTTaGGGGGATTCCTGTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSGFLRR*GDSCTW Trigger: CCAAGTACAGGAATCCCCTCAACGCCTCAGAAACCC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR TCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTCTGTTGTGGGTTTCTaGGGCGTTGAGGGGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSSVVGF*GVEGIP Trigger: AGGAATCCCCTCAACGCCTCAGAAACCCACAACAGA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTCTCCGCACACAGTTTaGAACAACAGCACCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSSPHTV*NNSTSD Trigger: ATCGCTGGTGCTGTTGTTCCAAACTGTGTGCGGAGA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTATACACTGGGGTGGTaGACTGCTCCATTGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSYTLGW*TAPLSY Trigger: GTAGGACAATGGAGCAGTCCACCACCCCAGTGTATA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGTATCAGGTTCATGCTaGGTTGCTGTGCACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSVSGSC*VAVHTG Trigger: TCCAGTGTGCACAGCAACCCAGCATGAACCTGATAC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS-3UTR GCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTAGGTTCATGCTGGGTTaGTGGAACTTTAACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSRFMLG*WNFNCG Trigger: TCCACAGTTAAAGTTCCAGCAACCCAGCATGAACCT...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTTTGCTCAGCAAACTTaGAGTGTCTGCCCAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSFAQQT*SVCPRL Trigger: CAATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTTGGTCTCCTGGATTTaGAACACTTTCTGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSLVSWI*NTFCCG Trigger: CCCACAACAGAAAGTGTTCCAAATCCAGGAGACCAA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR TCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGCATTATTCCATTGTTaGTTTTTGGTGGGTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSALFHC*FLVGLD Trigger: GTCCAGACCCACCAAAAATCAACAATGGAATAATGC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTAGTTGGTTGGTCTCCTaGATTTGGAACACTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSSWLVS*IWNTFC Trigger: ACAGAAAGTGTTCCAAATCCAGGAGACCAACCAACT...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGTATCAGGTTCATGCTaGGTTGCTGGAACTTTAACT | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSVSGSC*VAGTLT Trigger: AGTTAAAGTTCCAGCAACCCAGCATGAACCTGATAC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR GCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGTCCTACATCAGACTTaGTCACAGTACAATATATGG | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSVLHQT*SQYNIW Trigger: CCATATATTGTACTGTGAGCAAGTCTGATGTAGGAC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGGGGATTCCTGTACTTaGAACATTAACTACTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSGDSCT*NINYWF Trigger: AAACCAGTAGTTAATGTTCCAAGTACAGGAATCCCC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR TCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTTCTGGAGTATCACATaGTTTCTCACAGAATGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSFWSIT*FLTECF Trigger: GAAACATTCTGTGAGAAATCATGTGATACTCCAGAA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR TCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTAATTTCCAAACAGGATaGAGCCTTTGTCACATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSNFQTG*SLCHMN Trigger: ATTCATGTGACAAAGGCTTCATCCTGTTTGGAAATT...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTCCATTGTTGATTTTTaGTGGGTCTGGACAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSSIVDF*WVWTKY Trigger: ATATTTTGTCCAGACCCACCAAAAATCAACAATGGA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CCA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTACTGGTTTCTTAATTaGGACCTTAGATTCCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: IEHTPKQVEKVETGFLLSYWFLN*DLRFLY Trigger: ATAGAGGAATCTAAGGTCCCAATTAAGAAACCAGTA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS CCA 90 bp | GCATTAGGAATGTCTGGAGGTGGGCCGCAGTCTCCGCACACAGTTTaGAACAACAGCACCAGCGATAGTGACAGCACCAGCAGCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: ALGMSGGGPQSPHTV*NNSTSDSDSTSSSG Trigger: ACCACTGCTGCTGGTGCTGTCACTATCGCTGGTGCTGTTGTTCCAAACTGTGTGCGGAGACTGCGGCCCACCTCCAGACATTCCTAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTGGGTTTCTGAGGCGTaGAGGGGATTCCTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSWVSEA*RGFLYL Trigger: CAAGTACAGGAATCCCCTCAACGCCTCAGAAACCCA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS CCA 90 bp | GTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTGCTaGAACTTTAACTGTGGAAGGTTTCTGAGGAGTTGGTTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCRCSCRGIRFMLGC*NFNCGRFLRSWLVS Trigger: GGAGACCAACCAACTCCTCAGAAACCTTCCACAGTTAAAGTTCCAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTCAGGTTCATGCTGGGTaGCTGTGCACACTGGAAATT | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSQVHAG*LCTLEI Trigger: AATTTCCAGTGTGCACAGCAACCCAGCATGAACCTG...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS TCA 90 bp | GTTGGTTGGTCTCCTGGATTTGGAACACTTTCTGTTGTGGGTTTCTaGGGCGTTGAGGGGATTCCTGTACTTGGAACATTAACTACTGGT | + |
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Preference number: 5 (lower is better) Translates to: VGWSPGFGTLSVVGF*GVEGIPVLGTLTTG Trigger: ACCAGTAGTTAATGTTCCAAGTACAGGAATCCCCTCAACGCCTCAGAAACCCACAACAGAAAGTGTTCCAAATCCAGGAGACCAACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTCTTTGCTCAGCAAACTaGGAGTGTCTGCCCAAGATT | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSLCSAN*ECLPKI Trigger: AATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAAG...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGTATGCCACTTTGCTTaGCTCAGCAAACTTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSVCHFA*LSKLGV Trigger: CACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATAC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTCACGAGTATGCCACTTaGCTTTGCTCAGCAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSHEYAT*LCSANL Trigger: CAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTG...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTTGGAACACTTTCTGTaGTGGGTTTCTGAGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSLEHFL*WVSEAL Trigger: CAACGCCTCAGAAACCCACAACAGAAAGTGTTCCAA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTTTCTGAGGAGTTGGTaGGTCTCCTGGATTTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSFLRSW*VSWIWN Trigger: GTTCCAAATCCAGGAGACCAACCAACTCCTCAGAAA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTAAGGTTTCTGAGGAGTaGGTTGGTCTCCTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSKVSEE*VGLLDL Trigger: CAAATCCAGGAGACCAACCAACTCCTCAGAAACCTT...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS GCA 90 bp | TTTGTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTaGTGGAACTTTAACTGTGGAAGGTTTCTGAGGAGTTGGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FVCRCSCRGIRFMLG*WNFNCGRFLRSWLV Trigger: GACCAACCAACTCCTCAGAAACCTTCCACAGTTAAAGTTCCAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS GCA 90 bp | GACTCTCCTTTGTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATaGTGGGTTGCTGTGCACACTGGAAATTCATCATCCCAATCAACA | + |
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Preference number: 5 (lower is better) Translates to: DSPLSVDVLVVVSGS*WVAVHTGNSSSQST Trigger: TGTTGATTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAAAGGAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTCTTCCTCTCCTTTCCTaGAAAGTCAGACCTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSLPLLS*KVRPSV Trigger: AACAGAAGGTCTGACTTTCAAGGAAAGGAGAGGAAG...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 90 bp | TCTCCTTTGTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATGCTaGGTTGCTGTGCACACTGGAAATTCATCATCCCAATCAACAGTA | + |
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Preference number: 5 (lower is better) Translates to: SPLSVDVLVVVSGSC*VAVHTGNSSSQSTV Trigger: TACTGTTGATTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAAAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTAATCCTCAAGGCAAGTaGATTTTCCTGAGAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSNPQGK*IFLRVK Trigger: CTTCACTCTCAGGAAAATCAACTTGCCTTGAGGATT...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTCGCATTATTCCATTGTaGATTTTTGGTGGGTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSRIIPL*IFGGSG Trigger: TCCAGACCCACCAAAAATCAACAATGGAATAATGCG...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTGAGTTAGACTCTCCTTaGTCTGTAGATGTTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSELDSP*SVDVLV Trigger: GACAAGAACATCTACAGACAAAGGAGAGTCTAACTC...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS GCA 90 bp | TTTGTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTaGTGTGCACACTGGAAATTCATCATCCCAATCAACAGTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: FVCRCSCRGIRFMLG*CAHWKFIIPINSIS Trigger: GGAAATACTGTTGATTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTTGCTCTCTTGTCCTACATCAGACTaGCTCACAGTACAATATATG | + |
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Preference number: 5 (lower is better) Translates to: IEHTPKQVEKVETGFLLSCPTSD*LTVQYM Trigger: CATATATTGTACTGTGAGCAAGTCTGATGTAGGACA...AGAGAGCAAGAATCCAGTCTCCACCTTTTCAACCTGTTTGGGTGTGTGCTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS TCA 90 bp | TTCGTGGCTCGACCATTGGCCATTTTCAAGACAGACAACTATGTTTaGCTTGTCTGGAACTTGTTTAAAGCCGTTATTACACGAGTATGC | + |
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Preference number: 5 (lower is better) Translates to: FVARPLAIFKTDNYV*LVWNLFKAVITRVC Trigger: GCATACTCGTGTAATAACGGCTTTAAACAAGTTCCAGACAAGTCAAACATAGTTGTCTGTCTTGAAAATGGCCAATGGTCGAGCCACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 90 bp | GGAGTATCACATGATTTCTCACAGAATGTTTCGTGGCTCGACCATTaGCCATTTTCAAGACAGACAACTATGTTTGACTTGTCTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: GVSHDFSQNVSWLDH*PFSRQTTMFDLSGT Trigger: AGTTCCAGACAAGTCAAACATAGTTGTCTGTCTTGAAAATGGCCAATGGTCGAGCCACGAAACATTCTGTGAGAAATCATGTGATACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 90 bp | CTCAGTCTTTCTGGAGTATCACATGATTTCTCACAGAATGTTTCGTaGCTCGACCATTGGCCATTTTCAAGACAGACAACTATGTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LSLSGVSHDFSQNVS*LDHWPFSRQTTMFD Trigger: GTCAAACATAGTTGTCTGTCTTGAAAATGGCCAATGGTCGAGCCACGAAACATTCTGTGAGAAATCATGTGATACTCCAGAAAGACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 72 bp | ATGTCTGGAGGTGGGCCGCAGTCTCCGCACACAGTTTaGAACAACAGCACCAGCGATAGTGACAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: MSGGGPQSPHTV*NNSTSDSDSTS Trigger: GCTGGTGCTGTCACTATCGCTGGTGCTGTTGTTCCAAACTGTGTGCGGAGACTGCGGCCCACCTCCAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 72 bp | GTGTCTGCCCAAGATTGGCCTGGCATTAGGAATGTCTaGAGGTGGGCCGCAGTCTCCGCACACAGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VSAQDWPGIRNV*RWAAVSAHSLE Trigger: TTCCAAACTGTGTGCGGAGACTGCGGCCCACCTCCAGACATTCCTAATGCCAGGCCAATCTTGGGCAGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CAA 72 bp | TTACACGAGTATGCCACTTTGCTTTGCTCAGCAAACTaGGAGTGTCTGCCCAAGATTGGCCTGGCATTAGGA | + |
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Preference number: 6 (lower is better) Translates to: LHEYATLLCSAN*ECLPKIGLALG Trigger: TCCTAATGCCAGGCCAATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CAA 90 bp | AAGCCGTTATTACACGAGTATGCCACTTTGCTTTGCTCAGCAAACTaGGAGTGTCTGCCCAAGATTGGCCTGGCATTAGGAATGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KPLLHEYATLLCSAN*ECLPKIGLALGMSG Trigger: TCCAGACATTCCTAATGCCAGGCCAATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAATAACGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 72 bp | TGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTGCTaGAACTTTAACTGTGGAAGGTTTCTGAGGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSCRGIRFMLGC*NFNCGRFLRSW Trigger: CCAACTCCTCAGAAACCTTCCACAGTTAAAGTTCCAGCAACCCAGCATGAACCTGATACCACGACAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS CAA 90 bp | TGGAACTTGTTTAAAGCCGTTATTACACGAGTATGCCACTTTGCTTaGCTCAGCAAACTTGGAGTGTCTGCCCAAGATTGGCCTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: WNLFKAVITRVCHFA*LSKLGVSAQDWPGI Trigger: AATGCCAGGCCAATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAATAACGGCTTTAAACAAGTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS TCA 72 bp | TCTCCTGGATTTGGAACACTTTCTGTTGTGGGTTTCTaGGGCGTTGAGGGGATTCCTGTACTTGGAACATTA | + |
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Preference number: 6 (lower is better) Translates to: SPGFGTLSVVGF*GVEGIPVLGTL Trigger: TAATGTTCCAAGTACAGGAATCCCCTCAACGCCTCAGAAACCCACAACAGAAAGTGTTCCAAATCCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS GCA 72 bp | AGATGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTaGTGGAACTTTAACTGTGGAAGGTTTCTGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RCSCRGIRFMLG*WNFNCGRFLRS Trigger: ACTCCTCAGAAACCTTCCACAGTTAAAGTTCCAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS GCA 72 bp | AGATGTTCTTGTCGTGGTATCAGGTTCATGCTGGGTTaGTGTGCACACTGGAAATTCATCATCCCAATCAAC | + |
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Preference number: 6 (lower is better) Translates to: RCSCRGIRFMLG*CAHWKFIIPIN Trigger: GTTGATTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS GCA 72 bp | TTGTCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATaGTGGGTTGCTGTGCACACTGGAAATTCATCATCC | + |
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Preference number: 6 (lower is better) Translates to: LSVDVLVVVSGS*WVAVHTGNSSS Trigger: GGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS CCA 72 bp | TCTGTAGATGTTCTTGTCGTGGTATCAGGTTCATGCTaGGTTGCTGTGCACACTGGAAATTCATCATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SVDVLVVVSGSC*VAVHTGNSSSQ Trigger: TTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAACATCTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS GCA 72 bp | TTCTTGTCGTGGTATCAGGTTCATGCTGGGTTGCTGTaGACACTGGAAATTCATCATCCCAATCAACAGTAT | + |
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Preference number: 6 (lower is better) Translates to: FLSWYQVHAGLL*TLEIHHPNQQY Trigger: ATACTGTTGATTGGGATGATGAATTTCCAGTGTGCACAGCAACCCAGCATGAACCTGATACCACGACAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119432.2 |
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| CDS CCA 72 bp | TGCTGGAACTTTAACTGTGGAAGGTTTCTGAGGAGTTaGTTGGTCTCCTGGATTTGGAACACTTTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: CWNFNCGRFLRS*LVSWIWNTFCC Trigger: ACAACAGAAAGTGTTCCAAATCCAGGAGACCAACCAACTCCTCAGAAACCTTCCACAGTTAAAGTTCCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS CAA 72 bp | TTTAAAGCCGTTATTACACGAGTATGCCACTTTGCTTaGCTCAGCAAACTTGGAGTGTCTGCCCAAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: FKAVITRVCHFA*LSKLGVSAQDW Trigger: CCAATCTTGGGCAGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAATAACGGCTTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CAA 72 bp | ACTTGTTTAAAGCCGTTATTACACGAGTATGCCACTTaGCTTTGCTCAGCAAACTTGGAGTGTCTGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TCLKPLLHEYAT*LCSANLECLPK Trigger: CTTGGGCAGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAATAACGGCTTTAAACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS GCA 72 bp | GTCTGGAACTTGTTTAAAGCCGTTATTACACGAGTATaGCACTTTGCTTTGCTCAGCAAACTTGGAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VWNLFKAVITRV*HFALLSKLGVS Trigger: AGACACTCCAAGTTTGCTGAGCAAAGCAAAGTGGCATACTCGTGTAATAACGGCTTTAAACAAGTTCCAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 72 bp | TCCTGTACTTGGAACATTAACTACTGGTTTCTTAATTaGGACCTTAGATTCCTCTATACACTGGGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SCTWNINYWFLN*DLRFLYTLGWW Trigger: CCACCACCCCAGTGTATAGAGGAATCTAAGGTCCCAATTAAGAAACCAGTAGTTAATGTTCCAAGTACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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| CDS TCA 72 bp | TCTGAACCGAATAATATGCCGGTTGGTATGTTGATGTaGCCATTATCCAGATCTTTAGGATTAGGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: SEPNNMPVGMLM*PLSRSLGLGHD Trigger: ATCATGCCCTAATCCTAAAGATCTGGATAATGGTCACATCAACATACCAACCGGCATATTATTCGGTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS TCA 72 bp | CGACCATTGGCCATTTTCAAGACAGACAACTATGTTTaGCTTGTCTGGAACTTGTTTAAAGCCGTTATTACA | + |
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Preference number: 6 (lower is better) Translates to: RPLAIFKTDNYV*LVWNLFKAVIT Trigger: TGTAATAACGGCTTTAAACAAGTTCCAGACAAGTCAAACATAGTTGTCTGTCTTGAAAATGGCCAATGGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS TCA 72 bp | AACAGCAACAAATCCATATATATAACGGTCACCACCTaGGTTAGACTCTCCTTTGTCTGTAGATGTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NSNKSIYITVTT*VRLSFVCRCSC Trigger: ACAAGAACATCTACAGACAAAGGAGAGTCTAACTCAGGTGGTGACCGTTATATATATGGATTTGTTGCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CAA 72 bp | CATTGGCCATTTTCAAGACAGACAACTATGTTTGACTaGTCTGGAACTTGTTTAAAGCCGTTATTACACGAG | + |
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Preference number: 6 (lower is better) Translates to: HWPFSRQTTMFD*SGTCLKPLLHE Trigger: CTCGTGTAATAACGGCTTTAAACAAGTTCCAGACAAGTCAAACATAGTTGTCTGTCTTGAAAATGGCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112488.9 ENSMUST00000119432.2 |
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| CDS CCA 72 bp | TTTTGGTGGGTCTGGACAAAATATTTCTGTGCACACTaGAAATTCATCATCCCAATCAACAGTATTTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: FWWVWTKYFCAH*KFIIPINSISY Trigger: ATAGGAAATACTGTTGATTGGGATGATGAATTTCCAGTGTGCACAGAAATATTTTGTCCAGACCCACCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112488.9 |
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