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Pregenerated sensors for CD52 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000682

Ensembl transcript IDs: ENSMUST00000000696.7

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATCTGCTATCAACCCTTCCCGTGGGTTGGGATGTCTCTCGCTACTaGTGGTGGCAGCAGTGGGTGGAGCACGGGGCTTCAGAAGCTGCG +
Preference number: 1 (lower is better)
Translates to: YLLSTLPVGWDVSRY*WWQQWVEHGASEAA
Trigger: CGCAGCTTCTGAAGCCCCGTGCTCCACCCACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATAGCAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
3UTR CCA 90 bp CTGTCAACTTTAGCCTCCTTGGATATCTGCTATCAACCCTTCCCGTaGGTTGGGATGTCTCTCGCTACTGATGGTGGCAGCAGTGGGTGG +
Preference number: 1 (lower is better)
Translates to: LSTLASLDICYQPFP*VGMSLATDGGSSGW
Trigger: CCACCCACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATAGCAGATATCCAAGGAGGCTAAAGTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
3UTR TCA 72 bp TCAACCCTTCCCGTGGGTTGGGATGTCTCTCGCTACTaGTGGTGGCAGCAGTGGGTGGAGCACGGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: STLPVGWDVSRY*WWQQWVEHGAS
Trigger: TGAAGCCCCGTGCTCCACCCACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
3UTR CCA 72 bp TTAGCCTCCTTGGATATCTGCTATCAACCCTTCCCGTaGGTTGGGATGTCTCTCGCTACTGATGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: LASLDICYQPFP*VGMSLATDGGS
Trigger: GCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATAGCAGATATCCAAGGAGGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
3UTR GCA 72 bp GGCCATTGGCTGTCAACTTTAGCCTCCTTGGATATCTaGTATCAACCCTTCCCGTGGGTTGGGATGTCTCTC +
Preference number: 3 (lower is better)
Translates to: GHWLSTLASLDI*YQPFPWVGMSL
Trigger: GAGAGACATCCCAACCCACGGGAAGGGTTGATAGCAGATATCCAAGGAGGCTAAAGTTGACAGCCAATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS-3UTR TCA 90 bp TATCAACCCTTCCCGTGGGTTGGGATGTCTCTCGCTACTGATGGTGGCAGCAGTAGGCACCCGCATCGATaGTGGATGAGGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: YQPFPWVGMSLATDGGSSRHPHR*WMRPHS
Trigger: AGAGTGGGGCCTCATCCATCATCGATGCGGGTGCCT...ACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS-3UTR CCA 90 bp CTCGCTACTGATGGTGGCAGCAGTGGGTGGAGCACGGGGCTTCAGAAGCTGCGCGGCACATTAAGGTATTaGCAAAGAAGAGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LATDGGSSGWSTGLQKLRGTLRY*QRRGNC
Trigger: GCAGTTTCCTCTTCTTTGCCAATACCTTAATGTGCC...GCGCAGCTTCTGAAGCCCCGTGCTCCACCCACTGCTGCCACCATCAGTAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
3UTR CAA 72 bp CCTCCTTGGATATCTGCTATCAACCCTTCCCGTGGGTaGGGATGTCTCTCGCTACTGATGGTGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PPWISAINPSRG*GCLSLLMVAAV
Trigger: CACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATAGCAGATATCCAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS-3UTR CAA 90 bp GCTATCAACCCTTCCCGTGGGTTGGGATGTCTCTCGCTACTGATGGTGGCAGCAGTGGAGGTGCTGTTTTaGTTAGTACCAGAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: AINPSRGLGCLSLLMVAAVEVLF*LVPEAA
Trigger: GGCCGCTTCTGGTACTAACAAAAACAGCACCTCCAC...TGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS-3UTR CAA 90 bp ATGTCTCTCGCTACTGATGGTGGCAGCAGTGGGTGGAGCACGGGGCTTCAGAAGAGGCACATTAAGGTATaGGCAAAGAAGAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: MSLATDGGSSGWSTGLQKRHIKV*AKKRKL
Trigger: CAGTTTCCTCTTCTTTGCCAATACCTTAATGTGCCT...CTTCTGAAGCCCCGTGCTCCACCCACTGCTGCCACCATCAGTAGCGAGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS TCA 90 bp CCAGAAGCGGCCGTAGTGGCTTGTCCCAAGGATCCTGTTTGTATCTaGATCACAACCAGAAGAATGATAGTGAGGAAGAGGAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PEAAVVACPKDPVCI*ITTRRMIVRKRRKL
Trigger: GAGCTTCCTCCTCTTCCTCACTATCATTCTTCTGGTTGTGATTCAGATACAAACAGGATCCTTGGGACAAGCCACTACGGCCGCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS CAA 90 bp GTTAGTACCAGAAGCGGCCGTAGTGGCTTGTCCCAAGGATCCTGTTaGTATCTGAATCACAACCAGAAGAATGATAGTGAGGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: VSTRSGRSGLSQGSC*YLNHNQKNDSEEEE
Trigger: CTCCTCTTCCTCACTATCATTCTTCTGGTTGTGATTCAGATACAAACAGGATCCTTGGGACAAGCCACTACGGCCGCTTCTGGTACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS CAA 90 bp GGTGGAGGTGCTGTTTTTGTTAGTACCAGAAGCGGCCGTAGTGGCTaGTCCCAAGGATCCTGTTTGTATCTGAATCACAACCAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: GGGAVFVSTRSGRSG*SQGSCLYLNHNQKN
Trigger: ATTCTTCTGGTTGTGATTCAGATACAAACAGGATCCTTGGGACAAGCCACTACGGCCGCTTCTGGTACTAACAAAAACAGCACCTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7
CDS CAA 72 bp AGAAGCGGCCGTAGTGGCTTGTCCCAAGGATCCTGTTaGTATCTGAATCACAACCAGAAGAATGATAGTGAG +
Preference number: 6 (lower is better)
Translates to: RSGRSGLSQGSC*YLNHNQKNDSE
Trigger: CTCACTATCATTCTTCTGGTTGTGATTCAGATACAAACAGGATCCTTGGGACAAGCCACTACGGCCGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000696.7