Pregenerated sensors for CD48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015355Ensembl transcript IDs: ENSMUST00000015499.14, ENSMUST00000068584.7
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCTTGTTTCATCCAGAGTTGCTTCGCTaGCTAGGAACACTGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGTQVSGGALYKVLCLFHPELLR*LGTLLG Trigger: CCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTCTGG...ATGAAACAAGCACAGGACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| 3UTR-3UTR GCA 90 bp | TGTAAAGGACTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCTTGTTTCATAGAGCATaGATGCAAACTCTCGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: CKGLGTQVSGGALYKVLCLFHRA*MQTLAD Trigger: GTCTGCGAGAGTTTGCATGCATGCTCTATGAAACAA...GCACAGGACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAGTCCTTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| 3UTR GCA 72 bp | GCTAGGAACACTGCTAGGGATGAAGGCAAGACTCTGTaGTTCCAAGTTGCCTTCTTGGGTGAGAAGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ARNTARDEGKTL*FQVAFLGEKSS Trigger: AGAACTCTTCTCACCCAAGAAGGCAACTTGGAAGCACAGAGTCTTGCCTTCATCCCTAGCAGTGTTCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| 3UTR CCA 72 bp | ATTTTCCTTTGTCCAATAGAGCCAGAGTTGCTTCGCTaGCTAGGAACACTGCTAGGGATGAAGGCAAGACTC | + |
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Preference number: 3 (lower is better) Translates to: IFLCPIEPELLR*LGTLLGMKARL Trigger: GAGTCTTGCCTTCATCCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTCTGGCTCTATTGGACAAAGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| 3UTR GCA 72 bp | TGTACAAGGTCCTGTGCTTGTTTCATAGAGCATGCATaGAAACTCTCGCAGACGTTCAGTAACACATTTTCC | + |
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Preference number: 3 (lower is better) Translates to: CTRSCACFIEHA*KLSQTFSNTFS Trigger: GGAAAATGTGTTACTGAACGTCTGCGAGAGTTTGCATGCATGCTCTATGAAACAAGCACAGGACCTTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR GCA 90 bp | TGTAAAGGACTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCTCAGGGTTACATTGCTaGCGGTGGTGGCATTTATAT | + |
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Preference number: 4 (lower is better) Translates to: CKGLGTQVSGGALYKVLCSGLHC*RWWHLY Trigger: ATATAAATGCCACCACCGGCAGCAATGTAACCCTGA...GCACAGGACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAGTCCTTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| 3UTR CAA 72 bp | CAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCTaGTTTCATAGAGCATGCATGCAAACTCTCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: QVSGGALYKVLC*FHRACMQTLAD Trigger: GTCTGCGAGAGTTTGCATGCATGCTCTATGAAACAAGCACAGGACCTTGTACAGTGCTCCACCACTGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | ATAGAGCCAGAGTTGCTTCGCTGGCTAGGAACACTGCTAGGGATGAAGGCAAGAGTTAACAGGATCCTGTaGATGATGAGTGTTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: IEPELLRWLGTLLGMKARVNRIL*MMSVVT Trigger: GGTCACAACACTCATCATTCACAGGATCCTGTTAAC...TCTTGCCTTCATCCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTCTGGCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | ACACTGCTAGGGATGAAGGCAAGACTCTGTGCTTCCAAGTTGCCTTCTTGGGTGTGCTTACAGGATTGCTaGCTTGGCAGGTGTAAAATG | + |
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Preference number: 4 (lower is better) Translates to: TLLGMKARLCASKLPSWVCLQDC*LGRCKM Trigger: CATTTTACACCTGCCAAGTCAGCAATCCTGTAAGCA...CACCCAAGAAGGCAACTTGGAAGCACAGAGTCTTGCCTTCATCCCTAGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | CCTTTGTCCAATAGAGCCAGAGTTGCTTCGCTGGCTAGGAACACTGCTAGGGATCATTGCTGCCGGTGGTaGCATTTATATCTGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PLSNRARVASLARNTARDHCCRW*HLYLVL Trigger: CAATACCAGATATAAATGCCACCACCGGCAGCAATG...ATCCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTCTGGCTCTATTGGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | TGTCCAATAGAGCCAGAGTTGCTTCGCTGGCTAGGAACACTGCTAGGGATGAAGCATTGCTGCCGGTGGTaGCATTTATATCTGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: CPIEPELLRWLGTLLGMKHCCRW*HLYLVL Trigger: CAATACCAGATATAAATGCCACCACCGGCAGCAATG...CTTCATCCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTCTGGCTCTATTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | GCTAGGAACACTGCTAGGGATGAAGGCAAGACTCTGTGCTTCCAAGTTGCCTTCCGGACATTAGAGATATaGAGTGCACCATTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARNTARDEGKTLCFQVAFRTLEI*SAPLFS Trigger: AGAAAACAATGGTGCACTTCATATCTCTAATGTCCG...GAAGGCAACTTGGAAGCACAGAGTCTTGCCTTCATCCCTAGCAGTGTTCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | GGAGCACTGTACAAGGTCCTGTGCTTGTTTCATAGAGCATGCATGCAAACTCTCGTTAACAGGATCCTGTaGATGATGAGTGTTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: GALYKVLCLFHRACMQTLVNRIL*MMSVVT Trigger: GGTCACAACACTCATCATTCACAGGATCCTGTTAAC...GAGAGTTTGCATGCATGCTCTATGAAACAAGCACAGGACCTTGTACAGTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTTCGCTGGCTAGGAACACTGCTAGGGATGAAGGCAAGACTCTGTGCTTTTATATGGTCCAAGTaGGTCCTTATGGATTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ELLRWLGTLLGMKARLCAFIWSK*VLMDFQ Trigger: CTGAAAATCCATAAGGACCCACTTGGACCATATAAA...AGCACAGAGTCTTGCCTTCATCCCTAGCAGTGTTCCTAGCCAGCGAAGCAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | GGAGCACTGTACAAGGTCCTGTGCTTGTTTCATAGAGCATGCATGCAAACTCTCACGCTTCAGTCTTATTaGTTTCTATGGAAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GALYKVLCLFHRACMQTLTLQSY*FLWKAW Trigger: CCAAGCCTTCCATAGAAATCAATAAGACTGAAGCGT...GAGAGTTTGCATGCATGCTCTATGAAACAAGCACAGGACCTTGTACAGTGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | TACAAGGTCCTGTGCTTGTTTCATAGAGCATGCATGCAAACTCTCGCAGACGTTTGTAGACTTGTTCTGTaGTGTGACGATGAGATCGAG | + |
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Preference number: 4 (lower is better) Translates to: YKVLCLFHRACMQTLADVCRLVL*CDDEIE Trigger: CTCGATCTCATCGTCACACCACAGAACAAGTCTACA...AACGTCTGCGAGAGTTTGCATGCATGCTCTATGAAACAAGCACAGGACCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS-3UTR GCA 90 bp | TCTCGCAGACGTTCAGTAACACATTTTCCTTTGTCCAATAGAGCCAGAGTTGCTTCAGGGTTACATTGCTaGCGGTGGTGGCATTTATAT | + |
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Preference number: 4 (lower is better) Translates to: SRRRSVTHFPLSNRARVASGLHC*RWWHLY Trigger: ATATAAATGCCACCACCGGCAGCAATGTAACCCTGA...AGCAACTCTGGCTCTATTGGACAAAGGAAAATGTGTTACTGAACGTCTGCGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | AATCTTTGTAAAGGACTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCTTTATATGGTCCAAGTaGGTCCTTATGGATTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: NLCKGLGTQVSGGALYKVFIWSK*VLMDFQ Trigger: CTGAAAATCCATAAGGACCCACTTGGACCATATAAA...GACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAGTCCTTTACAAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CCA 90 bp | TCTCGCAGACGTTCAGTAACACATTTTCCTTTGTCCAATAGAGCCAGAGTTGCTATCGAGCACATATCCTaGACTCTTTTTGGGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SRRRSVTHFPLSNRARVAIEHIS*TLFGER Trigger: CCTTTCCCCAAAAAGAGTCCAGGATATGTGCTCGAT...AGCAACTCTGGCTCTATTGGACAAAGGAAAATGTGTTACTGAACGTCTGCGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS-3UTR TCA 90 bp | ATGAAGGCAAGACTCTGTGCTTCCAAGTTGCCTTCTTGGGTGAGAAGAGTTCTTCGGACATTAGAGATATaGAGTGCACCATTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: MKARLCASKLPSWVRRVLRTLEI*SAPLFS Trigger: AGAAAACAATGGTGCACTTCATATCTCTAATGTCCG...AAGAACTCTTCTCACCCAAGAAGGCAACTTGGAAGCACAGAGTCTTGCCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CAA 90 bp | TGTAAAGGACTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCATTTTCAGGGTTACATaGCTGCCGGTGGTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: CKGLGTQVSGGALYKVLCIFRVT*LPVVAF Trigger: AAATGCCACCACCGGCAGCAATGTAACCCTGAAAAT...GCACAGGACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAGTCCTTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CAA 90 bp | GCTAGGAACACTGCTAGGGATGAAGGCAAGACTCTGTGCTTCCAAGTTGCCTTCTACACTGTGTCGTTCTaGCTGCTTACAGGATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ARNTARDEGKTLCFQVAFYTVSF*LLTGLL Trigger: CAGCAATCCTGTAAGCAGCAAGAACGACACAGTGTA...GAAGGCAACTTGGAAGCACAGAGTCTTGCCTTCATCCCTAGCAGTGTTCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS-3UTR CAA 90 bp | AATCTTTGTAAAGGACTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCATTTTCAGGGTTACATaGCTGCCGGTGGTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: NLCKGLGTQVSGGALYKVIFRVT*LPVVAF Trigger: AAATGCCACCACCGGCAGCAATGTAACCCTGAAAAT...GACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAGTCCTTTACAAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS-3UTR CAA 90 bp | CTGGGCACACAGGTCAGTGGTGGAGCACTGTACAAGGTCCTGTGCTTGTTTCATGACGCTTCAGTCTTATaGATTTCTATGGAAGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGTQVSGGALYKVLCLFHDASVL*ISMEGL Trigger: CAAGCCTTCCATAGAAATCAATAAGACTGAAGCGTC...ATGAAACAAGCACAGGACCTTGTACAGTGCTCCACCACTGACCTGTGTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS GCA 90 bp | TATATGGTCCAAGTGGGTCCTTATGGATTTTCAGGGTTACATTGCTaGCGGTGGTGGCATTTATATCTGGTATTGAATGACCTTGAAATC | + |
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Preference number: 5 (lower is better) Translates to: YMVQVGPYGFSGLHC*RWWHLYLVLNDLEI Trigger: GATTTCAAGGTCATTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGACCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS GCA 90 bp | GTTTATATGGTCCAAGTGGGTCCTTATGGATTTTCAGGGTTACATTaGTGCCGGTGGTGGCATTTATATCTGGTATTGAATGACCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VYMVQVGPYGFSGLH*CRWWHLYLVLNDLE Trigger: TTCAAGGTCATTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGACCATATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS CCA 72 bp | GTTCTGTGGTGTGACGATGAGATCGAGCACATATCCTaGACTCTTTTTGGGGAAAGGTCCCGAGCTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: VLWCDDEIEHIS*TLFGERSRALI Trigger: TATGAGAGCTCGGGACCTTTCCCCAAAAAGAGTCCAGGATATGTGCTCGATCTCATCGTCACACCACAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS CCA 72 bp | CAGGTGATACGTTTATATGGTCCAAGTGGGTCCTTATaGATTTTCAGGGTTACATTGCTGCCGGTGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QVIRLYGPSGSL*IFRVTLLPVVA Trigger: TGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGACCATATAAACGTATCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS CAA 72 bp | GGTCCAAGTGGGTCCTTATGGATTTTCAGGGTTACATaGCTGCCGGTGGTGGCATTTATATCTGGTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: GPSGSLWIFRVT*LPVVAFISGIE Trigger: TTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS TCA 72 bp | TCAGGTGACAGGAATCAGTCGACGCTTCAGTCTTATTaGTTTCTATGGAAGGCTTGGGCACAGGATCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SGDRNQSTLQSY*FLWKAWAQDQI Trigger: TATTTGATCCTGTGCCCAAGCCTTCCATAGAAATCAATAAGACTGAAGCGTCGACTGATTCCTGTCACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS GCA 72 bp | CAAGTGGGTCCTTATGGATTTTCAGGGTTACATTGCTaGCGGTGGTGGCATTTATATCTGGTATTGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: QVGPYGFSGLHC*RWWHLYLVLND Trigger: GTCATTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS GCA 72 bp | GTCCAAGTGGGTCCTTATGGATTTTCAGGGTTACATTaGTGCCGGTGGTGGCATTTATATCTGGTATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VQVGPYGFSGLH*CRWWHLYLVLN Trigger: ATTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS CCA 72 bp | AGTATGAAGCCAGGTGATACGTTTATATGGTCCAAGTaGGTCCTTATGGATTTTCAGGGTTACATTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SMKPGDTFIWSK*VLMDFQGYIAA Trigger: GGCAGCAATGTAACCCTGAAAATCCATAAGGACCCACTTGGACCATATAAACGTATCACCTGGCTTCATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS CAA 72 bp | GTCGACGCTTCAGTCTTATTGATTTCTATGGAAGGCTaGGGCACAGGATCAAATACTTCCAGGGTTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VDASVLLISMEG*GTGSNTSRVIF Trigger: GAAGATAACCCTGGAAGTATTTGATCCTGTGCCCAAGCCTTCCATAGAAATCAATAAGACTGAAGCGTCGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068584.7 |
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| CDS CCA 72 bp | CCTTATGGATTTTCAGGGTTACATTGCTGCCGGTGGTaGCATTTATATCTGGTATTGAATGACCTTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PYGFSGLHCCRW*HLYLVLNDLEI Trigger: GATTTCAAGGTCATTCAATACCAGATATAAATGCCACCACCGGCAGCAATGTAACCCTGAAAATCCATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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| CDS GCA 72 bp | ACCTTTGTCCTCTTTCCGGACATTAGAGATATGAAGTaGACCATTGTTTTCTTCAAGATAAACCCTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TFVLFPDIRDMK*TIVFFKINPAF Trigger: AAAGGCAGGGTTTATCTTGAAGAAAACAATGGTGCACTTCATATCTCTAATGTCCGGAAAGAGGACAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015499.14 ENSMUST00000068584.7 |
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