Pregenerated sensors for CD47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055447Ensembl transcript IDs: ENSMUST00000084838.14, ENSMUST00000114496.3, ENSMUST00000229101.2, ENSMUST00000229104.2, ENSMUST00000229206.2, ENSMUST00000229640.2, ENSMUST00000230281.2, ENSMUST00000230641.2, ENSMUST00000230836.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGACAAGAGGCGTAGAACCCCCTCCCCGGGCCTTGCGAGGGCCTaGCGGAGACACGTGTTGCCATGCAGGAGACACAGTTCAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: RDKRRRTPSPGLARA*RRHVLPCRRHSSDF Trigger: GAAATCTGAACTGTGTCTCCTGCATGGCAACACGTGTCTCCGTCAGGCCCTCGCAAGGCCCGGGGAGGGGGTTCTACGCCTCTTGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 90 bp | ACGAGAACTGGGAGCCACTGCGGGTTTGATTTAAAGAGGGTGAACTaGCCCAATAATGCCCAGGCAGGAGGACTCTTAATGCTGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: TRTGSHCGFDLKRVN*PNNAQAGGLLMLPS Trigger: GGATGGCAGCATTAAGAGTCCTCCTGCCTGGGCATTATTGGGCCAGTTCACCCTCTTTAAATCAAACCCGCAGTGGCTCCCAGTTCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 90 bp | CAGATGGATGGGATGACTGTACGGACAGCCGTGCGGGAGGAGCAATaGAGCAAACAGTTTGAAAGAGAAGAAAAATGGGATTCAGCCATA | + |
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Preference number: 1 (lower is better) Translates to: QMDGMTVRTAVREEQ*SKQFEREEKWDSAI Trigger: TATGGCTGAATCCCATTTTTCTTCTCTTTCAAACTGTTTGCTCCATTGCTCCTCCCGCACGGCTGTCCGTACAGTCATCCCATCCATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | TGCTGCCATCCTTCATACAGAGAGTTGATTATTAGGAGCAAGAGTTaGGTTCGTCTTTCGTTTCCCTGGCTACCACCGATGGGACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: CCHPSYRELIIRSKS*VRLSFPWLPPMGLS Trigger: AGACAGTCCCATCGGTGGTAGCCAGGGAAACGAAAGACGAACTCAACTCTTGCTCCTAATAATCAACTCTCTGTATGAAGGATGGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | CCAGGCAGGAGGACTCTTAATGCTGCCATCCTTCATACAGAGAGTTaGTTATTAGGAGCAAGAGTTGAGTTCGTCTTTCGTTTCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PGRRTLNAAILHTES*LLGARVEFVFRFPG Trigger: GCCAGGGAAACGAAAGACGAACTCAACTCTTGCTCCTAATAATCAACTCTCTGTATGAAGGATGGCAGCATTAAGAGTCCTCCTGCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR GCA 90 bp | GAGACACGTGTTGCCATGCAGGAGACACAGTTCAGATTTCAGTCTTaGTTTGTCATGCCTCCGATCAGAAAACATGAGAAGAAACACTGT | + |
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Preference number: 1 (lower is better) Translates to: ETRVAMQETQFRFQS*FVMPPIRKHEKKHC Trigger: ACAGTGTTTCTTCTCATGTTTTCTGATCGGAGGCATGACAAAGCAAGACTGAAATCTGAACTGTGTCTCCTGCATGGCAACACGTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | ATTTGCCCAACCACATTCGTTTTTCTACTTCAGTCTCTATCACTATaGCCCAGAAGTGGCAGTCTTGTTATTCAGCTAGCAGCGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: ICPTTFVFLLQSLSL*PRSGSLVIQLAAEV Trigger: CACTTCCGCTGCTAGCTGAATAACAAGACTGCCACTTCTGGGTCATAGTGATAGAGACTGAAGTAGAAAAACGAATGTGGTTGGGCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | CTGCTCATCTCTTTCAAGTTAACTTGGATCATATCTGTGAGCCACTaGAGATGGCAAAACAAGACCCTCTGTGGGTTGTGGCAGTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LLISFKLTWIISVSH*RWQNKTLCGLWQLR Trigger: TCTTAACTGCCACAACCCACAGAGGGTCTTGTTTTGCCATCTTCAGTGGCTCACAGATATGATCCAAGTTAACTTGAAAGAGATGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 90 bp | TACTCCATGCGATCACAACTGTCAGGACGGTGGTTTTCTTCTAACTaGGTAGGGAATGTGGTAGTTTTGTTTGACCTTTCAAACTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: YSMRSQLSGRWFSSN*VGNVVVLFDLSNLE Trigger: CTCCAAGTTTGAAAGGTCAAACAAAACTACCACATTCCCTACCCAGTTAGAAGAAAACCACCGTCCTGACAGTTGTGATCGCATGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | GTCATAGGTTTAGGTTTGCCACAGACAAACCATTTGGTCCCCACATaGAAGATGACAAAAAGTTTGGCATACGAGAGGCACATGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: VIGLGLPQTNHLVPT*KMTKSLAYERHMET Trigger: TGTTTCCATGTGCCTCTCGTATGCCAAACTTTTTGTCATCTTTCATGTGGGGACCAAATGGTTTGTCTGTGGCAAACCTAAACCTATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | TACTTTTCTTTGCGAAGTACTATCTTGGTACTGTGGTCAGTTTTCTaGGAGGCCTCAGCAGGTCATAGGTTTAGGTTTGCCACAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: YFSLRSTILVLWSVF*EASAGHRFRFATDK Trigger: TTTGTCTGTGGCAAACCTAAACCTATGACCTGCTGAGGCCTCTCAGAAAACTGACCACAGTACCAAGATAGTACTTCGCAAAGAAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 90 bp | GTTTTTCATAGGTATCTCTGGGTAACTAACCCTCAGGTTAGTGCTTaGCGAGTCTCACTCGGAATCAATTTAAACTCAGTGTTCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VFHRYLWVTNPQVSA*RVSLGINLNSVFRD Trigger: GTCTCTGAACACTGAGTTTAAATTGATTCCGAGTGAGACTCGCCAAGCACTAACCTGAGGGTTAGTTACCCAGAGATACCTATGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | TTTGAGCACAGTGCTTTGCGAATAAGTCTGGCTCCTTTCTGCAACTaGCTATTGTGTCACAGGACCATGTTTAAAGAGGAGAAAAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: FEHSALRISLAPFCN*LLCHRTMFKEEKRY Trigger: ATACCTTTTCTCCTCTTTAAACATGGTCCTGTGACACAATAGTCAGTTGCAGAAAGGAGCCAGACTTATTCGCAAAGCACTGTGCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 90 bp | GCTCTCTACGATTGTATAAGTGGAGGGCAGACAATAAATAAAAATTaGATAGAGGCTATGACAGCAGAAATCGGGATTTGGGAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: ALYDCISGGQTINKN*IEAMTAEIGIWERK Trigger: TTTTCTCTCCCAAATCCCGATTTCTGCTGTCATAGCCTCTATTCAATTTTTATTTATTGTCTGCCCTCCACTTATACAATCGTAGAGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR GCA 90 bp | CAACATGATCCGAGTGTAAATATTTTCAGAACTAAAAGCATCAGGTaGCATCAGATTTATATAAAGGCGTTCAGCTCCTTGGAATTACGC | + |
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Preference number: 1 (lower is better) Translates to: QHDPSVNIFRTKSIR*HQIYIKAFSSLELR Trigger: GCGTAATTCCAAGGAGCTGAACGCCTTTATATAAATCTGATGGCACCTGATGCTTTTAGTTCTGAAAATATTTACACTCGGATCATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 90 bp | TGCTTTGAATATAAACTTAGTAATCATTTATGTGACATGTTTTCCTaGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAGCTGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: CFEYKLSNHLCDMFS*MEVSYCCLFLPAVS Trigger: ACTCACAGCTGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAAGTTTATATTCAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| 3UTR CAA 90 bp | GCATGCAACAAAGAGACAAGAGGCGTAGAACCCCCTCCCCGGGCCTaGCGAGGGCCTGACGGAGACACGTGTTGCCATGCAGGAGACACA | + |
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Preference number: 2 (lower is better) Translates to: ACNKETRGVEPPPRA*RGPDGDTCCHAGDT Trigger: TGTGTCTCCTGCATGGCAACACGTGTCTCCGTCAGGCCCTCGCAAGGCCCGGGGAGGGGGTTCTACGCCTCTTGTCTCTTTGTTGCATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR GCA 90 bp | GGGATGACTGTACGGACAGCCGTGCGGGAGGAGCAATGGAGCAAACAGTTTGAAGATGAGTGTTCAGCATaGAACAAAGAGACAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GMTVRTAVREEQWSKQFEDECSA*NKETRG Trigger: GCCTCTTGTCTCTTTGTTGCATGCTGAACACTCATC...TTCAAACTGTTTGCTCCATTGCTCCTCCCGCACGGCTGTCCGTACAGTCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | GGGATGACTGTACGGACAGCCGTGCGGGAGGAGCAATGGAGCAAACAGTTTGAAGTATTCTTCCATTTCTaGCTTCCAAGTTACAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: GMTVRTAVREEQWSKQFEVFFHF*LPSYSP Trigger: CGGACTGTAACTTGGAAGTCAGAAATGGAAGAATAC...TTCAAACTGTTTGCTCCATTGCTCCTCCCGCACGGCTGTCCGTACAGTCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | GGGATGACTGTACGGACAGCCGTGCGGGAGGAGCAATGGAGCAAACAGTTTGAATCCCCACATGAAAGATaGCAAAAAGTTTGGCATACG | + |
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Preference number: 2 (lower is better) Translates to: GMTVRTAVREEQWSKQFESPHER*QKVWHT Trigger: CGTATGCCAAACTTTTTGTCATCTTTCATGTGGGGA...TTCAAACTGTTTGCTCCATTGCTCCTCCCGCACGGCTGTCCGTACAGTCATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCACGCCTCTGCCCATACAGAAGGTGCATGTGCCGACTTCATACATGTGCACAGTCTTGCTTTGTCATaGCTCCGATCAGAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: CHASAHTEGACADFIHVHSLALS*LRSENM Trigger: CATGTTTTCTGATCGGAGGCATGACAAAGCAAGACT...GTGCACATGTATGAAGTCGGCACATGCACCTTCTGTATGGGCAGAGGCGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | TATGACAGCAGAAATCGGGATTTGGGAGAGAAAAGCGCATTGTGGGACAAAACATGTTCCTTCCAGCTGTaGGTCGTGAAGACCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: YDSRNRDLGEKSALWDKTCSFQL*VVKTWC Trigger: GCACCAGGTCTTCACGACTCACAGCTGGAAGGAACA...TGTTTTGTCCCACAATGCGCTTTTCTCTCCCAAATCCCGATTTCTGCTGTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | TATGACAGCAGAAATCGGGATTTGGGAGAGAAAAGCGCATTGTGGGACAAAACATTCAGAGGGCACTGGTaGGCAGTCCTAAAAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: YDSRNRDLGEKSALWDKTFRGHW*AVLKAW Trigger: CCAAGCTTTTAGGACTGCTCACCAGTGCCCTCTGAA...TGTTTTGTCCCACAATGCGCTTTTCTCTCCCAAATCCCGATTTCTGCTGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CAA 90 bp | TCAGGACGGTGGTTTTCTTCTAACTGGGTAGGGAATGTGGTAGTTTaGTTTGACCTTTCAAACTTGGAGGAAGAGGAGGAGGAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGRWFSSNWVGNVVV*FDLSNLEEEEEEEE Trigger: TTCCTCCTCCTCCTCCTCTTCCTCCAAGTTTGAAAGGTCAAACAAAACTACCACATTCCCTACCCAGTTAGAAGAAAACCACCGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTGCGAAGTACTATCTTGGTACTGTGGTCAGTTTTCTGAGAGGCCTCAGAGACACGTGTTGCCATaGAGGAGACACAGTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: FLCEVLSWYCGQFSERPQRHVLP*RRHSSD Trigger: ATCTGAACTGTGTCTCCTGCATGGCAACACGTGTCT...CTGAGGCCTCTCAGAAAACTGACCACAGTACCAAGATAGTACTTCGCAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR CCA 90 bp | AATATCATAGCACACAGAGGGGCCACACGGGATTTGCCCAACCACATTCGTTTTACTATGACCCAGAAGTaGCAGTCTTGTTATTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NIIAHRGATRDLPNHIRFTMTQK*QSCYSA Trigger: AGCTGAATAACAAGACTGCCACTTCTGGGTCATAGT...AAAACGAATGTGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTGCTATGATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CAA 90 bp | CACGTGTTGCCATGCAGGAGACACAGTTCAGATTTCAGTCTTGCTTaGTCATGCCTCCGATCAGAAAACATGAGAAGAAACACTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: HVLPCRRHSSDFSLA*SCLRSENMRRNTVD Trigger: ATCTACAGTGTTTCTTCTCATGTTTTCTGATCGGAGGCATGACAAAGCAAGACTGAAATCTGAACTGTGTCTCCTGCATGGCAACACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR GCA 90 bp | AATATCATAGCACACAGAGGGGCCACACGGGATTTGCCCAACCACATTCGTTTTGAGTTTACTAAGGCTTaGTGGATACCACTGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: NIIAHRGATRDLPNHIRFEFTKA*WIPLFF Trigger: GAAAAACAGTGGTATCCAGCAAGCCTTAGTAAACTC...AAAACGAATGTGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTGCTATGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAGCTGTaGGTCGTGAAGACCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVCSFQL*VVKTWC Trigger: GCACCAGGTCTTCACGACTCACAGCTGGAAGGAACA...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTGCTGGCAACCTGAGTTTACTAAGGCTTGCTGGATACCACTGTTTTTCAACGTTTGCCCCTAGTTaGGTAGAAACAATAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: KAAGNLSLLRLAGYHCFSTFAPS*VETIEK Trigger: TTTTTCTATTGTTTCTACTCAACTAGGGGCAAACGT...TGAAAAACAGTGGTATCCAGCAAGCCTTAGTAAACTCAGGTTGCCAGCAGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR CCA 90 bp | AATAGCAGAGTGGGTGCATCAGTTTTTGAGCTTTATAAACTCAAGTATGGTTCATTGACCTTTCAAACTTaGAGGAAGAGGAGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NSRVGASVFELYKLKYGSLTFQT*RKRRRR Trigger: CCTCCTCCTCCTCTTCCTCCAAGTTTGAAAGGTCAA...TGAACCATACTTGAGTTTATAAAGCTCAAAAACTGATGCACCCACTCTGCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTGTATTCTTCCATTTCTaGCTTCCAAGTTACAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLVFFHF*LPSYSP Trigger: CGGACTGTAACTTGGAAGTCAGAAATGGAAGAATAC...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGCAGAGTGGGTGCATCAGTTTTTGAGCTTTATAAACTCAAGTATGGTTCAAACAGACCAGACCTGTaGTTTTCAGGTGAACTGTCA | + |
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Preference number: 2 (lower is better) Translates to: NSRVGASVFELYKLKYGSNRPDL*FSGELS Trigger: TGACAGTTCACCTGAAAATCACAGGTCTGGTCTGTT...TGAACCATACTTGAGTTTATAAAGCTCAAAAACTGATGCACCCACTCTGCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCGTATTCTTCCATTTCTaGCTTCCAAGTTACAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFVFFHF*LPSYSP Trigger: CGGACTGTAACTTGGAAGTCAGAAATGGAAGAATAC...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGCAGAGTGGGTGCATCAGTTTTTGAGCTTTATAAACTCAAGTATGGTTCATGTGGTAGTTTTGTTTaGCCTTTCAAACTTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NSRVGASVFELYKLKYGSCGSFV*PFKLGG Trigger: TCCTCCAAGTTTGAAAGGTCAAACAAAACTACCACA...TGAACCATACTTGAGTTTATAAAGCTCAAAAACTGATGCACCCACTCTGCTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCACAAGACTTTTAATCGGATATTTCTCAACAATTTAAACAGACCAGACAAATGGGATTCCAATTaGTTACACAGCACATCATAT | + |
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Preference number: 2 (lower is better) Translates to: HSHKTFNRIFLNNLNRPDKWDSN*LHSTSY Trigger: ATATGATGTGCTGTGTAACCAATTGGAATCCCATTT...GTCTGGTCTGTTTAAATTGTTGAGAAATATCCGATTAAAAGTCTTGTGGCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 72 bp | AGGCGTAGAACCCCCTCCCCGGGCCTTGCGAGGGCCTaGCGGAGACACGTGTTGCCATGCAGGAGACACAGT | + |
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Preference number: 3 (lower is better) Translates to: RRRTPSPGLARA*RRHVLPCRRHS Trigger: ACTGTGTCTCCTGCATGGCAACACGTGTCTCCGTCAGGCCCTCGCAAGGCCCGGGGAGGGGGTTCTACGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 72 bp | GCCTCAAGTGGCAGGCAGCATAGAGAACATGACAGCTaGTTAAGACCCAAAACTGAACCCCGAGCAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: ASSGRQHREHDS*LRPKTEPRAEG Trigger: CCCCTCTGCTCGGGGTTCAGTTTTGGGTCTTAACCAGCTGTCATGTTCTCTATGCTGCCTGCCACTTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 72 bp | GGAGGCTGCAGGAGGCAGGATACAGTAGGAAGGCGATaGGTGTTCAGCATGCAACAAAGAGACAAGAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: GGCRRQDTVGRR*VFSMQQRDKRR Trigger: ACGCCTCTTGTCTCTTTGTTGCATGCTGAACACTCATCGCCTTCCTACTGTATCCTGCCTCCTGCAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR CAA 90 bp | GGGATGACTGTACGGACAGCCGTGCGGGAGGAGCAATGGAGCAAACAGTTTGAACATCATTCTTGGAAGTaGCCCCTGAAACGTTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: GMTVRTAVREEQWSKQFEHHSWK*PLKRLP Trigger: GGGCAAACGTTTCAGGGGCAACTTCCAAGAATGATG...TTCAAACTGTTTGCTCCATTGCTCCTCCCGCACGGCTGTCCGTACAGTCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 72 bp | GGGAGCCACTGCGGGTTTGATTTAAAGAGGGTGAACTaGCCCAATAATGCCCAGGCAGGAGGACTCTTAATG | + |
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Preference number: 3 (lower is better) Translates to: GSHCGFDLKRVN*PNNAQAGGLLM Trigger: CATTAAGAGTCCTCCTGCCTGGGCATTATTGGGCCAGTTCACCCTCTTTAAATCAAACCCGCAGTGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR GCA 72 bp | CTAAAAGCACAAAGTTGGCATCTGCTCTTCTGTAGATaGCACGCCTCTGCCCATACAGAAGGTGCATGTGCC | + |
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Preference number: 3 (lower is better) Translates to: LKAQSWHLLFCR*HASAHTEGACA Trigger: GGCACATGCACCTTCTGTATGGGCAGAGGCGTGGCATCTACAGAAGAGCAGATGCCAACTTTGTGCTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR-3UTR CAA 90 bp | TGCCACGCCTCTGCCCATACAGAAGGTGCATGTGCCGACTTCATACATGTGCACGGGAATGTGGTAGTTTaGTTTGACCTTTCAAACTTG | + |
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Preference number: 3 (lower is better) Translates to: CHASAHTEGACADFIHVHGNVVV*FDLSNL Trigger: CAAGTTTGAAAGGTCAAACAAAACTACCACATTCCC...GTGCACATGTATGAAGTCGGCACATGCACCTTCTGTATGGGCAGAGGCGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR CCA 72 bp | GGCTTGCTGGATACCACTGTTTTTCATAGGTATCTCTaGGTAACTAACCCTCAGGTTAGTGCTTGGCGAGTC | + |
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Preference number: 3 (lower is better) Translates to: GLLDTTVFHRYL*VTNPQVSAWRV Trigger: GACTCGCCAAGCACTAACCTGAGGGTTAGTTACCCAGAGATACCTATGAAAAACAGTGGTATCCAGCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| 3UTR TCA 72 bp | AAAGGGGTGTGTGTGAATGATGGCAACCCCCAAGAATaGAGACACCAGTGCCATCAATATCATAGCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: KGVCVNDGNPQE*RHQCHQYHSTQ Trigger: CTGTGTGCTATGATATTGATGGCACTGGTGTCTTCATTCTTGGGGGTTGCCATCATTCACACACACCCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR GCA 72 bp | TGGCAAAGCTGCTGGCAACCTGAGTTTACTAAGGCTTaGTGGATACCACTGTTTTTCATAGGTATCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WQSCWQPEFTKA*WIPLFFIGISG Trigger: CCCAGAGATACCTATGAAAAACAGTGGTATCCAGCAAGCCTTAGTAAACTCAGGTTGCCAGCAGCTTTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR CCA 72 bp | TGTTCAGAGACTCTAGGATCTAACAAGCATCATTCTTaGAAGTTGCCCCTGAAACGTTTGCCCCTAGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSETLGSNKHHS*KLPLKRLPLVE Trigger: CTCAACTAGGGGCAAACGTTTCAGGGGCAACTTCCAAGAATGATGCTTGTTAGATCCTAGAGTCTCTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR CCA 72 bp | AGGTATCTCTGGGTAACTAACCCTCAGGTTAGTGCTTaGCGAGTCTCACTCGGAATCAATTTAAACTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RYLWVTNPQVSA*RVSLGINLNSV Trigger: CACTGAGTTTAAATTGATTCCGAGTGAGACTCGCCAAGCACTAACCTGAGGGTTAGTTACCCAGAGATACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | AGTGCTTTGCGAATAAGTCTGGCTCCTTTCTGCAACTaGCTATTGTGTCACAGGACCATGTTTAAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SALRISLAPFCN*LLCHRTMFKEE Trigger: CTCCTCTTTAAACATGGTCCTGTGACACAATAGTCAGTTGCAGAAAGGAGCCAGACTTATTCGCAAAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | TGCCACAGACAAACCATTTGGTCCCCACATGAAAGATaGCAAAAAGTTTGGCATACGAGAGGCACATGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHRQTIWSPHER*QKVWHTRGTWK Trigger: TTTCCATGTGCCTCTCGTATGCCAAACTTTTTGTCATCTTTCATGTGGGGACCAAATGGTTTGTCTGTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | TTAGGTTTGCCACAGACAAACCATTTGGTCCCCACATaGAAGATGACAAAAAGTTTGGCATACGAGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGLPQTNHLVPT*KMTKSLAYERH Trigger: GTGCCTCTCGTATGCCAAACTTTTTGTCATCTTTCATGTGGGGACCAAATGGTTTGTCTGTGGCAAACCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | TCTTTCAAGTTAACTTGGATCATATCTGTGAGCCACTaGAGATGGCAAAACAAGACCCTCTGTGGGTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFKLTWIISVSH*RWQNKTLCGLW Trigger: CCACAACCCACAGAGGGTCTTGTTTTGCCATCTTCAGTGGCTCACAGATATGATCCAAGTTAACTTGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | ACCACATTCGTTTTTCTACTTCAGTCTCTATCACTATaGCCCAGAAGTGGCAGTCTTGTTATTCAGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTFVFLLQSLSL*PRSGSLVIQLA Trigger: TGCTAGCTGAATAACAAGACTGCCACTTCTGGGTCATAGTGATAGAGACTGAAGTAGAAAAACGAATGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | AGGACTCTTAATGCTGCCATCCTTCATACAGAGAGTTaGTTATTAGGAGCAAGAGTTGAGTTCGTCTTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: RTLNAAILHTES*LLGARVEFVFR Trigger: ACGAAAGACGAACTCAACTCTTGCTCCTAATAATCAACTCTCTGTATGAAGGATGGCAGCATTAAGAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR-3UTR CAA 90 bp | TATGACAGCAGAAATCGGGATTTGGGAGAGAAAAGCGCATTGTGGGACAAAACAAAAATGGGATTCCAATaGGTTACACAGCACATCATA | + |
|
Preference number: 3 (lower is better) Translates to: YDSRNRDLGEKSALWDKTKMGFQ*VTQHII Trigger: TATGATGTGCTGTGTAACCAATTGGAATCCCATTTT...TGTTTTGTCCCACAATGCGCTTTTCTCTCCCAAATCCCGATTTCTGCTGTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCCACAAGACTTTTAATCGGATATTTCTCAACAATTTAAACAGACCAGACTTTGACCTTTCAAACTaGGAGGAAGAGGAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSHKTFNRIFLNNLNRPDFDLSN*EEEEEE Trigger: CTCCTCCTCCTCTTCCTCCAAGTTTGAAAGGTCAAA...GTCTGGTCTGTTTAAATTGTTGAGAAATATCCGATTAAAAGTCTTGTGGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCCACAAGACTTTTAATCGGATATTTCTCAACAATTTAAACAGACCAGACCCTTCATACAGAGAGTaGATTATTAGGAGCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSHKTFNRIFLNNLNRPDPSYRE*IIRSKS Trigger: ACTCTTGCTCCTAATAATCAACTCTCTGTATGAAGG...GTCTGGTCTGTTTAAATTGTTGAGAAATATCCGATTAAAAGTCTTGTGGCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR TCA 72 bp | GATTGTATAAGTGGAGGGCAGACAATAAATAAAAATTaGATAGAGGCTATGACAGCAGAAATCGGGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DCISGGQTINKN*IEAMTAEIGIW Trigger: CCAAATCCCGATTTCTGCTGTCATAGCCTCTATTCAATTTTTATTTATTGTCTGCCCTCCACTTATACAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR CCA 90 bp | GTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVKTWCLDNCILPFLTSKHGLFS*DEKDGS Trigger: GGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTG...CTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | GTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGGAACAGGCTGATCCTTaGTCAGTGTTGAAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVKTWCLDNCILPFLTSKEQADP*SVLKAV Trigger: CACGGCCTTCAACACTGACCAAGGATCAGCCTGTTC...CTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCTGGCAACCTGAGTTTACTAAGGCTTGCTGGATACCACTGTTTTTCAGCTTTTCTCCTGGGATaGGAAGGATGGCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KAAGNLSLLRLAGYHCFSAFLLG*EGWLQQ Trigger: TTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGC...TGAAAAACAGTGGTATCCAGCAAGCCTTAGTAAACTCAGGTTGCCAGCAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR CCA 90 bp | AATATCATAGCACACAGAGGGGCCACACGGGATTTGCCCAACCACATTCGTTTTCTATTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIIAHRGATRDLPNHIRFLFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAATAG...AAAACGAATGTGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTGCTATGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| 3UTR CAA 72 bp | GTAGGGAATGTGGTAGTTTTGTTTGACCTTTCAAACTaGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGNVVVLFDLSN*EEEEEEEEEEE Trigger: TTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCAAGTTTGAAAGGTCAAACAAAACTACCACATTCCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR GCA 90 bp | AATATCATAGCACACAGAGGGGCCACACGGGATTTGCCCAACCACATTCGTTTTACCACGAAACTAATTTaGAACCTCCTTTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIIAHRGATRDLPNHIRFTTKLI*NLLSPP Trigger: AGGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGT...AAAACGAATGTGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTGCTATGATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR CCA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAGAACAGGCTGATCCTTaGTCAGTGTTGAAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPEQADP*SVLKAV Trigger: CACGGCCTTCAACACTGACCAAGGATCAGCCTGTTC...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCTGGCAACCTGAGTTTACTAAGGCTTGCTGGATACCACTGTTTTTCAGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KAAGNLSLLRLAGYHCFSVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...TGAAAAACAGTGGTATCCAGCAAGCCTTAGTAAACTCAGGTTGCCAGCAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR CCA 90 bp | ATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCGAACAGGCTGATCCTTaGTCAGTGTTGAAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYVTCFPGWKSVTVVCSFEQADP*SVLKAV Trigger: CACGGCCTTCAACACTGACCAAGGATCAGCCTGTTC...GAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR CCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLHGLFS*DEKDGS Trigger: GGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTG...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCHGLFS*DEKDGS Trigger: GGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTG...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFHGLFS*DEKDGS Trigger: GGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTG...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| 3UTR CAA 72 bp | CCATGCAGGAGACACAGTTCAGATTTCAGTCTTGCTTaGTCATGCCTCCGATCAGAAAACATGAGAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCRRHSSDFSLA*SCLRSENMRRN Trigger: GTTTCTTCTCATGTTTTCTGATCGGAGGCATGACAAAGCAAGACTGAAATCTGAACTGTGTCTCCTGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR TCA 90 bp | GTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVKTWCLDNCILPFLTSKKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...CTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVHGLFS*DEKDGS Trigger: GGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTG...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGTTAGCTTTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKTWCLDNCILPFLTSKLAFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGC...TAACTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAGCTTTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPAFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGC...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 |
||
| 3UTR CAA 72 bp | TGGTTTTCTTCTAACTGGGTAGGGAATGTGGTAGTTTaGTTTGACCTTTCAAACTTGGAGGAAGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WFSSNWVGNVVV*FDLSNLEEEEE Trigger: CTCCTCCTCTTCCTCCAAGTTTGAAAGGTCAAACAAAACTACCACATTCCCTACCCAGTTAGAAGAAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR TCA 90 bp | TATGACAGCAGAAATCGGGATTTGGGAGAGAAAAGCGCATTGTGGGACAAAACACACAGTTTCATTGCATaGAGTGAACTCTATGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YDSRNRDLGEKSALWDKTHSFIA*SELYGV Trigger: AACTCCATAGAGTTCACTTCATGCAATGAAACTGTG...TGTTTTGTCCCACAATGCGCTTTTCTCTCCCAAATCCCGATTTCTGCTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCGCTTTTCTCCTGGGATaGGAAGGATGGCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFAFLLG*EGWLQQ Trigger: TTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGC...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR TCA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTGCTTTTCTCCTGGGATaGGAAGGATGGCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCAFLLG*EGWLQQ Trigger: TTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGC...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGGCTTTTCTCCTGGGATaGGAAGGATGGCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLAFLLG*EGWLQQ Trigger: TTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGC...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGTTAGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VKTWCLDNCILPFLTSKLVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...TAACTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAACCACGAAACTAATTTaGAACCTCCTTTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SREDLVLRQLYSSISDFQTTKLI*NLLSPP Trigger: AGGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGT...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGTTACTGTTTTGCCTTCTCTaGATAACTCTGTCACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKTWCLDNCILPFLTSKLLFCLL*ITLSLR Trigger: GCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAG...TAACTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCGAACAGGCTGATCCTTaGTCAGTGTTGAAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVEQADP*SVLKAV Trigger: CACGGCCTTCAACACTGACCAAGGATCAGCCTGTTC...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCACTATTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPLFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAATAG...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229640.2 ENSMUST00000230836.2 |
||
| CDS-3UTR TCA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR TCA 90 bp | CAACTGTATTCTTCCATTTCTGACTTCCAAGTTACAGTCCGTCACTTCCCTTCATCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLYSSISDFQVTVRHFPSSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...TGAAGGGAAGTGACGGACTGTAACTTGGAAGTCAGAAATGGAAGAATACAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229101.2 ENSMUST00000229206.2 |
||
| CDS-3UTR TCA 90 bp | ATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: IYVTCFPGWKSVTVVCSFVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...GAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR TCA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CCA 90 bp | ATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCTGTTTTGCCTTCTCTaGATAACTCTGTCACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVTCFPGWKSVTVVCSFLFCLL*ITLSLR Trigger: GCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAG...GAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CCA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCTGTTTTGCCTTCTCTaGATAACTCTGTCACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLLFCLL*ITLSLR Trigger: GCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAG...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGGCTTTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLAFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGC...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGAGGATCTTTTCATTTaGAGAAAACCACGAAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SREDLVLRQLYSSISDFQEDLFI*RKPRNR Trigger: ACGGTTTCGTGGTTTTCTCCAAATGAAAAGATCCTC...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR TCA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGCACTGGTAAAGTTTTaGTCTGTAGTAGTGCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SREDLVLRQLYSSISDFQALVKF*SVVVLF Trigger: AAATAGCACTACTACAGATCAAAACTTTACCAGTGC...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCCTCCAGTTCTCAACAACAGGCAAATACAGGTGCTTATATTTACACATAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPPVLNNRQIQVLIFTHKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...ATGTGTAAATATAAGCACCTGTATTTGCCTGTTGTTGAGAACTGGAGGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR TCA 90 bp | ATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYVTCFPGWKSVTVVCSFKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...GAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCATCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGGTTCTGCTAGAGCTATaGTCCCCAAACCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLVLLEL*SPNLKS Trigger: TGATTTCAGGTTTGGGGATCATAGCTCTAGCAGAAC...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR GCA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTACCACGAAACTAATTTaGAACCTCCTTTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLTTKLI*NLLSPP Trigger: AGGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGT...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
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| CDS-3UTR CCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGCTGTTTTGCCTTCTCTaGATAACTCTGTCACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLLFCLL*ITLSLR Trigger: GCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAG...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| 3UTR CAA 72 bp | ACTAACACGATAATAGCAGAGTGGGTGCATCAGTTTTaGAGCTTTATAAACTCAAGTATGGTTCAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TNTIIAEWVHQF*SFINSSMVQPL Trigger: GAGTGGCTGAACCATACTTGAGTTTATAAAGCTCAAAAACTGATGCACCCACTCTGCTATTATCGTGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR TCA 90 bp | ATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCACAGTTTCATTGCATaGAGTGAACTCTATGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYVTCFPGWKSVTVVCSFHSFIA*SELYGV Trigger: AACTCCATAGAGTTCACTTCATGCAATGAAACTGTG...GAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCAAGAGGCAATGCCATTaGTTAAGTCTGAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFKRQCH*LSLRLR Trigger: TCTCAGTCTCAGACTTAATCAATGGCATTGCCTCTT...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTTCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCCTGTTTTGCCTTCTCTaGATAACTCTGTCACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVLFCLL*ITLSLR Trigger: GCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAG...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCCTATTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVLFLGG*IVLWLE Trigger: TTCCAACCAGAGGACTATCCAACCTCCTAGGAATAG...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229640.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGCACAGTTTCATTGCATaGAGTGAACTCTATGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLHSFIA*SELYGV Trigger: AACTCCATAGAGTTCACTTCATGCAATGAAACTGTG...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCTCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTCAATATGGCAATGGTaGAAGAGGTCATTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLSIWQW*KRSFQK Trigger: CTTTTGGAATGACCTCTTTCACCATTGCCATATTGA...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CCA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTGAGGATCTTTTCATTTaGAGAAAACCACGAAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCEDLFI*RKPRNR Trigger: ACGGTTTCGTGGTTTTCTCCAAATGAAAAGATCCTC...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCGCACTGGTAAAGTTTTaGTCTGTAGTAGTGCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NHLCDMFSWMEVSYCCLFALVKF*SVVVLF Trigger: AAATAGCACTACTACAGATCAAAACTTTACCAGTGC...GAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CCA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCGAGGATCTTTTCATTTaGAGAAAACCACGAAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVEDLFI*RKPRNR Trigger: ACGGTTTCGTGGTTTTCTCCAAATGAAAAGATCCTC...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS TCA 90 bp | CCAAACCTGAAATCAAAAGGGGGCCGTGCACTGGCTCACATGCCATaGTGCAGAGACACAGCCCGACCAAAGCAAGGACGTAGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNLKSKGGRALAHMP*CRDTARPKQGRSPA Trigger: TGCTGGGCTACGTCCTTGCTTTGGTCGGGCTGTGTCTCTGCATCATGGCATGTGAGCCAGTGCACGGCCCCCTTTTGATTTCAGGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CCA 90 bp | TACAATGAGGCCAAGTCCAGAAGCATTCTTCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCCAACAACCACGATGACTGTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YNEAKSRSILHGLFS*DEKDGSNNHDDCEH Trigger: GTGCTCACAGTCATCGTGGTTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTGAAGAATGCTTCTGGACTTGGCCTCATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 |
||
| CDS-3UTR CAA 90 bp | CACACAGAGGGGCCACACGGGATTTGCCCAACCACATTCGTTTTTCTACTTCAGAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTEGPHGICPTTFVFLLQSSITV*PSLDNS Trigger: AGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCT...CTGAAGTAGAAAAACGAATGTGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS GCA 90 bp | TACGATTTGTTCAACTTCCACTTCACAAACATTTCTTCGGTGCTTTaGGCCTCCACATTACGGACGATGCAAGGGATGACCACAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YDLFNFHFTNISSVL*ASTLRTMQGMTTVS Trigger: TGAAACTGTGGTCATCCCTTGCATCGTCCGTAATGTGGAGGCGCAAAGCACCGAAGAAATGTTTGTGAAGTGGAAGTTGAACAAATCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CAA 90 bp | GTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGAACCACGAAACTAATTaGCAACCTCCTTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVKTWCLDNCILPFLTSKNHETN*QPPFSS Trigger: GGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGTT...CTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
||
| CDS-3UTR CAA 90 bp | GTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGTGGATAGTCCTCTGGTaGGAAGCGACAAACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VVKTWCLDNCILPFLTSKWIVLW*EATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCA...CTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTTGCGAAGTACTATCTTGGTACTGTGGTCAGTTTTCTGAGAGGCCTCAGAAAGAGGCAATGCCATaGATTAAGTCTGAGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLCEVLSWYCGQFSERPQKEAMP*IKSETE Trigger: CTCAGTCTCAGACTTAATCAATGGCATTGCCTCTTT...CTGAGGCCTCTCAGAAAACTGACCACAGTACCAAGATAGTACTTCGCAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
||
| CDS-3UTR CAA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAAACCACGAAACTAATTaGCAACCTCCTTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SREDLVLRQLYSSISDFQNHETN*QPPFSS Trigger: GGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGTT...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
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| CDS-3UTR CAA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAATGGATAGTCCTCTGGTaGGAAGCGACAAACTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SREDLVLRQLYSSISDFQWIVLW*EATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCA...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGCGAAGTACTATCTTGGTACTGTGGTCAGTTTTCTGAGAGGCCTCAGATGACCACAGTTTCATaGCATGAAGTGAACTCTATG | + |
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Preference number: 5 (lower is better) Translates to: FLCEVLSWYCGQFSERPQMTTVS*HEVNSM Trigger: CATAGAGTTCACTTCATGCAATGAAACTGTGGTCAT...CTGAGGCCTCTCAGAAAACTGACCACAGTACCAAGATAGTACTTCGCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084838.14 |
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| CDS-3UTR CAA 90 bp | GTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAGTTATGGATAGTCCTCTGGTaGGAAGCGACAAACTTCATA | + |
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Preference number: 5 (lower is better) Translates to: VKTWCLDNCILPFLTSKLWIVLW*EATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCA...TAACTTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCATGGATAGTCCTCTGGTaGGAAGCGACAAACTTCATA | + |
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Preference number: 5 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPWIVLW*EATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCA...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | CAACTGTATTCTTCCATTTCTGACTTCCAAGTTACAGTCCGTCACTTCCCTTCAATGACCACAGTTTCATaGCATGAAGTGAACTCTATG | + |
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Preference number: 5 (lower is better) Translates to: QLYSSISDFQVTVRHFPSMTTVS*HEVNSM Trigger: CATAGAGTTCACTTCATGCAATGAAACTGTGGTCAT...TGAAGGGAAGTGACGGACTGTAACTTGGAAGTCAGAAATGGAAGAATACAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229206.2 |
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| CDS-3UTR CAA 90 bp | AGTCGTGAAGACCTGGTGCTTAGACAACTGTATTCTTCCATTTCTGACTTCCAAAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCT | + |
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Preference number: 5 (lower is better) Translates to: SREDLVLRQLYSSISDFQSSITV*PSLDNS Trigger: AGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCT...TTGGAAGTCAGAAATGGAAGAATACAGTTGTCTAAGCACCAGGTCTTCACGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | CATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTAACCACGAAACTAATTaGCAACCTCCTTTCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: HLCDMFSWMEVSYCCLFLNHETN*QPPFSS Trigger: GGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGTT...AAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
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| CDS-3UTR CAA 90 bp | TTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTCCTTCCAAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCT | + |
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Preference number: 5 (lower is better) Translates to: LCDMFSWMEVSYCCLFLPSSITV*PSLDNS Trigger: AGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCT...TGGAAGGAACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGAACCACGAAACTAATTaGCAACCTCCTTTCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLNHETN*QPPFSS Trigger: GGAGGAGAAAGGAGGTTGCAAATTAGTTTCGTGGTT...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 |
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| CDS-3UTR CAA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTTGGATAGTCCTCTGGTaGGAAGCGACAAACTTCATA | + |
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Preference number: 5 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCWIVLW*EATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCA...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS TCA 90 bp | ATGGTGAAAGAGGTCATTCCAAAAGCTGTCATAAACACATTGTACTaGAGTAGTATTAATATCCCCGTAGAGATTACAATGAGGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: MVKEVIPKAVINTLY*SSINIPVEITMRPS Trigger: ACTTGGCCTCATTGTAATCTCTACGGGGATATTAATACTACTTCAGTACAATGTGTTTATGACAGCTTTTGGAATGACCTCTTTCACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGATGACCACAGTTTCATaGCATGAAGTGAACTCTATG | + |
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Preference number: 5 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLMTTVS*HEVNSM Trigger: CATAGAGTTCACTTCATGCAATGAAACTGTGGTCAT...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | TTAGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCAAAGAGGCAATGCCATaGATTAAGTCTGAGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: LVIIYVTCFPGWKSVTVVKEAMP*IKSETE Trigger: CTCAGTCTCAGACTTAATCAATGGCATTGCCTCTTT...GACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | AGTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCT | + |
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Preference number: 5 (lower is better) Translates to: SNHLCDMFSWMEVSYCCLSSITV*PSLDNS Trigger: AGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCT...CAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS-3UTR CAA 90 bp | GTAATCATTTATGTGACATGTTTTCCTGGATGGAAGTCAGTTACTGTTGTCTGTAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCT | + |
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Preference number: 5 (lower is better) Translates to: VIIYVTCFPGWKSVTVVCSSITV*PSLDNS Trigger: AGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCT...ACAGACAACAGTAACTGACTTCCATCCAGGAAAACATGTCACATAAATGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS CCA 72 bp | GCCAAGTCCAGAAGCATTCTTCACGGGCTTTTCTCCTaGGATGAGAAGGATGGCTCCAACAACCACGATGAC | + |
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Preference number: 6 (lower is better) Translates to: AKSRSILHGLFS*DEKDGSNNHDD Trigger: GTCATCGTGGTTGTTGGAGCCATCCTTCTCATCCCAGGAGAAAAGCCCGTGAAGAATGCTTCTGGACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 |
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| CDS TCA 72 bp | GTGAACTCTATGGAGTTGACGTTACTAAACAGTAGTTaGGCTGAACCGCAGCAGCAGGAGCCCAGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: VNSMELTLLNSS*AEPQQQEPSNS Trigger: GCTGTTGCTGGGCTCCTGCTGCTGCGGTTCAGCTCAACTACTGTTTAGTAACGTCAACTCCATAGAGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CAA 90 bp | GATGCAGAGACACAGCCCGACCAAAGCAAGGACGTAGCCCAGCACTaGAGTGATCAATATGGCAATGGTGAAAGAGGTCATTCCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: DAETQPDQSKDVAQH*SDQYGNGERGHSKS Trigger: GCTTTTGGAATGACCTCTTTCACCATTGCCATATTGATCACTCAAGTGCTGGGCTACGTCCTTGCTTTGGTCGGGCTGTGTCTCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CAA 72 bp | ACACAGCCCGACCAAAGCAAGGACGTAGCCCAGCACTaGAGTGATCAATATGGCAATGGTGAAAGAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: TQPDQSKDVAQH*SDQYGNGERGH Trigger: ATGACCTCTTTCACCATTGCCATATTGATCACTCAAGTGCTGGGCTACGTCCTTGCTTTGGTCGGGCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS GCA 72 bp | TTCAACTTCCACTTCACAAACATTTCTTCGGTGCTTTaGGCCTCCACATTACGGACGATGCAAGGGATGACC | + |
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Preference number: 6 (lower is better) Translates to: FNFHFTNISSVL*ASTLRTMQGMT Trigger: GGTCATCCCTTGCATCGTCCGTAATGTGGAGGCGCAAAGCACCGAAGAAATGTTTGTGAAGTGGAAGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CCA 72 bp | GCGTTAAGGGGTTCCTCTACAGCTTTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAAGCGACAAACTTCATA | + |
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Preference number: 6 (lower is better) Translates to: ALRGSSTAFLGG*IVLWLEATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229206.2 ENSMUST00000230641.2 |
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| CDS CAA 72 bp | GTTCAACTTCCACTTCACAAACATTTCTTCGGTGCTTaGCGCCTCCACATTACGGACGATGCAAGGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: VQLPLHKHFFGA*RLHITDDARDD Trigger: GTCATCCCTTGCATCGTCCGTAATGTGGAGGCGCAAAGCACCGAAGAAATGTTTGTGAAGTGGAAGTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CAA 72 bp | TGCGTTAAGGGGTTCCTCTACAGCTTTCCTAGGAGGTaGGATAGTCCTCTGGTTGGAAGCGACAAACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: CVKGFLYSFPRR*DSPLVGSDKLH Trigger: ATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229206.2 ENSMUST00000230641.2 |
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| CDS CAA 72 bp | ACCGTTAAGGGGTTCCTCTACAGCTTTCCTAGGAGGTaGGATAGTCCTCTGGTTGGAAGCGACAAACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TVKGFLYSFPRR*DSPLVGSDKLH Trigger: ATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229104.2 ENSMUST00000230281.2 |
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| CDS CCA 72 bp | TCGTTAAGGGGTTCCTCTACAGCTTTCCTAGGAGGTTaGATAGTCCTCTGGTTGGAAGCGACAAACTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SLRGSSTAFLGG*IVLWLEATNFI Trigger: TATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229101.2 |
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| CDS CAA 72 bp | TTCGTTAAGGGGTTCCTCTACAGCTTTCCTAGGAGGTaGGATAGTCCTCTGGTTGGAAGCGACAAACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: FVKGFLYSFPRR*DSPLVGSDKLH Trigger: ATGAAGTTTGTCGCTTCCAACCAGAGGACTATCCAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229101.2 |
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| CDS CAA 90 bp | ATACGATTTGTTCAACTTCCACTTCACAAACATTTCTTCGGTGCTTaGCGCCTCCACATTACGGACGATGCAAGGGATGACCACAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: IRFVQLPLHKHFFGA*RLHITDDARDDHSF Trigger: GAAACTGTGGTCATCCCTTGCATCGTCCGTAATGTGGAGGCGCAAAGCACCGAAGAAATGTTTGTGAAGTGGAAGTTGAACAAATCGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS GCA 72 bp | ATTTGTTCAACTTCCACTTCACAAACATTTCTTCGGTaGTTTGCGCCTCCACATTACGGACGATGCAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ICSTSTSQTFLR*FAPPHYGRCKG Trigger: TCCCTTGCATCGTCCGTAATGTGGAGGCGCAAAGCACCGAAGAAATGTTTGTGAAGTGGAAGTTGAACAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CCA 72 bp | ATAACTCTGTCACTTCGCAAGTGTAGTTTCCCACCATaGCATCGCGCTTATCCATTTTCAAAGAGGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: ITLSLRKCSFPP*HRAYPFSKRQC Trigger: GCATTGCCTCTTTGAAAATGGATAAGCGCGATGCCATGGTGGGAAACTACACTTGCGAAGTGACAGAGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS CAA 72 bp | TTGAAGGCCGTGCGGTTTTTCAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCTGTCACTTCGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LKAVRFFSSITV*PSLDNSVTSQV Trigger: CACTTGCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCTGAAAAACCGCACGGCCTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229640.2 ENSMUST00000230641.2 |
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| CDS CAA 72 bp | CACGAAACCGTGCGGTTTTTCAGCTCTATAACTGTTTaGCCTTCTCTGGATAACTCTGTCACTTCGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: HETVRFFSSITV*PSLDNSVTSQV Trigger: CACTTGCGAAGTGACAGAGTTATCCAGAGAAGGCAAAACAGTTATAGAGCTGAAAAACCGCACGGTTTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000230281.2 ENSMUST00000230836.2 |
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| CDS TCA 72 bp | ACGGACGATGCAAGGGATGACCACAGTTTCATTGCATaGAGTGAACTCTATGGAGTTGACGTTACTAAACAG | + |
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Preference number: 6 (lower is better) Translates to: TDDARDDHSFIA*SELYGVDVTKQ Trigger: CTGTTTAGTAACGTCAACTCCATAGAGTTCACTTCATGCAATGAAACTGTGGTCATCCCTTGCATCGTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084838.14 ENSMUST00000229206.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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| CDS TCA 72 bp | GAGGTCATTCCAAAAGCTGTCATAAACACATTGTACTaGAGTAGTATTAATATCCCCGTAGAGATTACAATG | + |
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Preference number: 6 (lower is better) Translates to: EVIPKAVINTLY*SSINIPVEITM Trigger: CATTGTAATCTCTACGGGGATATTAATACTACTTCAGTACAATGTGTTTATGACAGCTTTTGGAATGACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000084838.14 ENSMUST00000114496.3 ENSMUST00000229101.2 ENSMUST00000229104.2 ENSMUST00000229206.2 ENSMUST00000229640.2 ENSMUST00000230281.2 ENSMUST00000230641.2 ENSMUST00000230836.2 |
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