Pregenerated sensors for CD46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016493Ensembl transcript IDs: ENSMUST00000159563.8, ENSMUST00000162650.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGCCTTGCCCATTTTGCTGGAAGTGGGAGGCTGTTGGAGAATTTaGTGGAAAGACTTCCCAGCGACTATGATGCATCCTGCAGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: AALPILLEVGGCWRI*WKDFPATMMHPAAA Trigger: TGCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | CCTTCATCCCAGTTGCCTTACCCCAGATGGCTGCCTTGCCCATTTTaGTGGAAGTGGGAGGCTGTTGGAGAATTTGCTGGAAAGACTTCC | + |
|
Preference number: 1 (lower is better) Translates to: PSSQLPYPRWLPCPF*WKWEAVGEFAGKTS Trigger: GGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | GCAAATCAGCTGCTCAGGAAGCTTCTTCTAAGCCTTCATCCCAGTTaGCTTACCCCAGATGGCTGCCTTGCCCATTTTGCTGGAAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: ANQLLRKLLLSLHPS*LTPDGCLAHFAGSG Trigger: CCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGGCTTAGAAGAAGCTTCCTGAGCAGCTGATTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 90 bp | CAGTTGCCTTACCCCAGATGGCTGCCTTGCCCATTTTGCTGGAAGTaGGAGGCTGTTGGAGAATTTGCTGGAAAGACTTCCCAGCGACTA | + |
|
Preference number: 1 (lower is better) Translates to: QLPYPRWLPCPFCWK*EAVGEFAGKTSQRL Trigger: TAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 90 bp | TCATCCCAGTTGCCTTACCCCAGATGGCTGCCTTGCCCATTTTGCTaGAAGTGGGAGGCTGTTGGAGAATTTGCTGGAAAGACTTCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SSQLPYPRWLPCPFC*KWEAVGEFAGKTSQ Trigger: CTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | TCTTCTAAGCCTTCATCCCAGTTGCCTTACCCCAGATGGCTGCCTTaGCCATTTTGCTGGAAGTGGGAGGCTGTTGGAGAATTTGCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: SSKPSSQLPYPRWLP*PFCWKWEAVGEFAG Trigger: TCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGGCTTAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 90 bp | GCCTTGCCCATTTTGCTGGAAGTGGGAGGCTGTTGGAGAATTTGCTaGAAAGACTTCCCAGCGACTATGATGCATCCTGCAGCTGCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: ALPILLEVGGCWRIC*KDFPATMMHPAAAK Trigger: CTTTGCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | TCAGTCCTGGTTGCAGCACAGCTGAAATCAGACTGTCACCTGCCTTaGGATTCAGACCTGAAGAACACCACCAGTCGGTCCATCTCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: SVLVAAQLKSDCHLP*DSDLKNTTSRSISY Trigger: GTAAGAGATGGACCGACTGGTGGTGTTCTTCAGGTCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACCAGGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | TCAGACCTGAAGAACACCACCAGTCGGTCCATCTCTTACACAGGCTaGCCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACC | + |
|
Preference number: 1 (lower is better) Translates to: SDLKNTTSRSISYTG*PISPGVQSLFLSST Trigger: GGTGCTAGACAAAAACAGACTCTGAACACCAGGAGAAATCGGTCAGCCTGTGTAAGAGATGGACCGACTGGTGGTGTTCTTCAGGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | CTCTGTATGTGGAGGACTGCTTCATTCACATCAGTATGGCTCGTCTaGACCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTGCAG | + |
|
Preference number: 1 (lower is better) Translates to: LCMWRTASFTSVWLV*TWKIHGALIQSWLQ Trigger: CTGCAACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGAGCCATACTGATGTGAATGAAGCAGTCCTCCACATACAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | TCGTCTGAACCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTaGAGCACAGCTGAAATCAGACTGTCACCTGCCTTGAGATTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: SSEPGRSMEHSFSPG*STAEIRLSPALRFR Trigger: TCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 90 bp | GGCATGGGGATAAGAGCTCCAACTGGACAGGGTTTGGTGTCTGCTTaGAAATGTGACCTTCTTCCTGCAAATACCATGTCACAGGCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: GMGIRAPTGQGLVSA*KCDLLPANTMSQAE Trigger: TTCTGCCTGTGACATGGTATTTGCAGGAAGAAGGTCACATTTCCAAGCAGACACCAAACCCTGTCCAGTTGGAGCTCTTATCCCCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | GGCACAGATGTGGTTAATTCACAGCCATTATGTGCAGTGAAAGTGTaGGGCATGGGGATAAGAGCTCCAACTGGACAGGGTTTGGTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: GTDVVNSQPLCAVKV*GMGIRAPTGQGLVS Trigger: AGACACCAAACCCTGTCCAGTTGGAGCTCTTATCCCCATGCCTCACACTTTCACTGCACATAATGGCTGTGAATTAACCACATCTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | CTGACAGGCAAAATGATTCTCAGGGCTGAGGCTGGTTCTTCTGACTaGACATCTCTGCTTTCTTCAGTGAGATCCTCTTCTTCTGGAAGC | + |
|
Preference number: 1 (lower is better) Translates to: LTGKMILRAEAGSSD*TSLLSSVRSSSSGS Trigger: GCTTCCAGAAGAAGAGGATCTCACTGAAGAAAGCAGAGATGTGCAGTCAGAAGAACCAGCCTCAGCCCTGAGAATCATTTTGCCTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | ACTAAATGGGAAGACTATTCTTGGTTCCAAGGGAACTGTGGACTCTaGCCCTCCTCCTGTCAGTTGCTGCAGGGAACTTACTTAACTGCA | + |
|
Preference number: 1 (lower is better) Translates to: TKWEDYSWFQGNCGL*PSSCQLLQGTYLTA Trigger: TGCAGTTAAGTAAGTTCCCTGCAGCAACTGACAGGAGGAGGGTCAGAGTCCACAGTTCCCTTGGAACCAAGAATAGTCTTCCCATTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | TGGGAGGCTGTTGGAGAATTTGCTGGAAAGACTTCCCAGCGACTATaGTGCATCCTGCAGCTGCAAAGCTATTTCAAGCCTTTGATTGAA | + |
|
Preference number: 1 (lower is better) Translates to: WEAVGEFAGKTSQRL*CILQLQSYFKPLIE Trigger: TTCAATCAAAGGCTTGAAATAGCTTTGCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | CCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTaGCGATGTGGCCACAATGTCTTCTCTAATCAGTCATCACATTTT | + |
|
Preference number: 1 (lower is better) Translates to: PCSFPQASKASRISF*RCGHNVFSNQSSHF Trigger: AAAATGTGATGACTGATTAGAGAAGACATTGTGGCCACATCGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | GTAGTTGTCTTGCTTCTTTCTGTAAACAGGCTGTGTTCTTTGCCTTaGTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: VVVLLLSVNRLCSLP*SFPQASKASRISFC Trigger: GCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGTTTACAGAAAGAAGCAAGACAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | ATTAATTGTAGCAAGGAAGGGGTAAGAGCTCTGTATGTGGAGGACTaGTTCATTCACATCAGTATGGCTCGTCTGAACCTGGAAGATCCA | + |
|
Preference number: 1 (lower is better) Translates to: INCSKEGVRALYVED*FIHISMARLNLEDP Trigger: TGGATCTTCCAGGTTCAGACGAGCCATACTGATGTGAATGAAGCAGTCCTCCACATACAGAGCTCTTACCCCTTCCTTGCTACAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | TTCTACCTCAGTACCACATTACTGTGGCTTTGGTCACCAAAAGAGTaGTCCTCAGGTTCAGGTCCCATTCCTGCAAGCAAATACTATTTT | + |
|
Preference number: 1 (lower is better) Translates to: FYLSTTLLWLWSPKE*SSGSGPIPASKYYF Trigger: AAAATAGTATTTGCTTGCAGGAATGGGACCTGAACCTGAGGATCACTCTTTTGGTGACCAAAGCCACAGTAATGTGGTACTGAGGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | AGCGACTATGATGCATCCTGCAGCTGCAAAGCTATTTCAAGCCTTTaGTTGAAGAATCCATGTTCTAAGTCACATCTAAGGATGTGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: SDYDASCSCKAISSL*LKNPCSKSHLRMCW Trigger: CCAGCACATCCTTAGATGTGACTTAGAACATGGATTCTTCAATCAAAGGCTTGAAATAGCTTTGCAGCTGCAGGATGCATCATAGTCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 90 bp | GTCATGTCGGGAATCAAGGTGGATAGTTTTTCAGCATTGTCTGTGTaGCAATATGTTCACCTGCTGTATGTAAACAAGCAAGAAGGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: VMSGIKVDSFSALSV*QYVHLLYVNKQEGK Trigger: TTTCCCTTCTTGCTTGTTTACATACAGCAGGTGAACATATTGCCACACAGACAATGCTGAAAAACTATCCACCTTGATTCCCGACATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 90 bp | GTTCTACTTTCCACTGATAGTTTATTTCAACCCTTCAGTAGGCGGTaGAAAAGTTCTATAAAACTGTTCAGAGATTTGCCAGCATTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: VLLSTDSLFQPFSRR*KSSIKLFRDLPALG Trigger: CCCCAATGCTGGCAAATCTCTGAACAGTTTTATAGAACTTTTTCACCGCCTACTGAAGGGTTGAAATAAACTATCAGTGGAAAGTAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 90 bp | GGAAAGTTAATTTGCTGTGCCAATCATAAGGAATTGGAAGTAGGTTaGTGCATGCAGACATTAAAAATGAAGGTCATTAAGACAGGAATG | + |
|
Preference number: 1 (lower is better) Translates to: GKLICCANHKELEVG*CMQTLKMKVIKTGM Trigger: CATTCCTGTCTTAATGACCTTCATTTTTAATGTCTGCATGCAGCAACCTACTTCCAATTCCTTATGATTGGCACAGCAAATTAACTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGGAGATTTGCCAGCATTaGGGGTGGTGGAGGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PASEPCGVSISISLSLPTEICQH*GWWRGR Trigger: CCTGCCCCTCCACCACCCCCAATGCTGGCAAATCTC...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | GGCTGCCTTGCCCATTTTGCTGGAAGTGGGAGGCTGTTGGAGAATTaGCTGGAAAGACTTCCCAGCGACTATGATGCATCCTGCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GCLAHFAGSGRLLEN*LERLPSDYDASCSC Trigger: GCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGACTGAGAACCCTTGGTaGGCTGCAGGGGCTGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: PASEPCGVSISISLSLPTTENPW*AAGAEM Trigger: CATTTCAGCCCCTGCAGCTCACCAAGGGTTCTCAGT...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | GCCTTCATCCCAGTTGCCTTACCCCAGATGGCTGCCTTGCCCATTTaGCTGGAAGTGGGAGGCTGTTGGAGAATTTGCTGGAAAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: AFIPVALPQMAALPI*LEVGGCWRICWKDF Trigger: GAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGCTCATGGTTGGATACTaGGAACCCTTGGTGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PASEPCGVSISISLSLPTLMVGY*EPLVSC Trigger: GCAGCTCACCAAGGGTTCTCAGTATCCAACCATGAG...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGAGTTCCAAGGGAACTGTaGACTCTGACCCTCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRVPREL*TLTLLL Trigger: CAGGAGGAGGGTCAGAGTCCACAGTTCCCTTGGAAC...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGAAGGGCAGCAGTGCTATaGTCTCAAAGGCTGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRRAAVL*SQRLTA Trigger: AGCTGTCAGCCTTTGAGATCATAGCACTGCTGCCCT...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGATTTCAGGTGACAGACTaGGTGTGGAAGGCACAGATG | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRFQVTD*VWKAQM Trigger: CATCTGTGCCTTCCACACTCAGTCTGTCACCTGAAA...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | TTCAGTCCTGGTTGCAGCACAGCTGAAATCAGACTGTCACCTGCCTaGAGATTCAGACCTGAAGAACACCACCAGTCGGTCCATCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: FSPGCSTAEIRLSPA*RFRPEEHHQSVHLL Trigger: TAAGAGATGGACCGACTGGTGGTGTTCTTCAGGTCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACCAGGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCATGATTGGGGAACTTTCAGGAAGAAAGCAGGTGGCCCCTTCCATAGGAGTTGGGTCTTGTACATGCTaGGCAAGCTTTCTGCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FMIGELSGRKQVAPSIGVGSCTC*ASFLLS Trigger: GCTCAGCAGAAAGCTTGCTCAGCATGTACAAGACCC...AACTCCTATGGAAGGGGCCACCTGCTTTCTTCCTGAAAGTTCCCCAATCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGAGAAGTGGGAGGCTGTTaGAGAATTTGCTGGAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSREVGGC*RICWKD Trigger: GTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTC...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCTGCCAGCATTGGGGGTaGTGGAGGGGCAGGGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: EVTQETSFALFLSAQSVGCQHWG*WRGRVH Trigger: ATGAACCCTGCCCCTCCACCACCCCCAATGCTGGCA...GCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGAATGACAATGTCACAGTaGAGAGGCAGAAGACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRMTMSQ*RGRRLS Trigger: TGACAGTCTTCTGCCTCTTCACTGTGACATTGTCAT...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTATGGCTCGTCTGAACCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTACAGGCTGTGTTCTTTaGCTTGCTCTTTCCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SMARLNLEDPWSTHSVLVTGCVL*LALSLK Trigger: CTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGT...AACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGAGCCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGTACATGCTGAGCAAGCTTTCTGCTGAGCTTCATCCCCAACCCATGAACACAGGCACTCATGGTTaGATACTGAGAACCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VLYMLSKLSAELHPQPMNTGTHG*ILRTLG Trigger: ACCAAGGGTTCTCAGTATCCAACCATGAGTGCCTGT...GTTCATGGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTCAGCATGTACAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTATGGCTCGTCTGAACCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTGTACACAGGCACTCATaGTTGGATACTGAGAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: SMARLNLEDPWSTHSVLVVHRHS*LDTENP Trigger: AGGGTTCTCAGTATCCAACCATGAGTGCCTGTGTAC...AACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGAGCCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGGGTCTTGTACATGCTGAGCAAGCTTTCTGCTGAGCTTCATCCCCAACCCGGTTTGGTGTCTGCTTaGAAATGTGACCTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FRVLYMLSKLSAELHPQPGLVSA*KCDLLP Trigger: AGGAAGAAGGTCACATTTCCAAGCAGACACCAAACC...GGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTCAGCATGTACAAGACCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGACCATTTTGCTGGAAGTaGGAGGCTGTTGGAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRPFCWK*EAVGEF Trigger: AAATTCTCCAACAGCCTCCCACTTCCAGCAAAATGG...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTGCCGCCCAGTGCTAAGGAATaGATTCAGGGTCTTGTACAT | + |
|
Preference number: 2 (lower is better) Translates to: FALLFPSSFKGQQDLILPPSAKE*IQGLVH Trigger: ATGTACAAGACCCTGAATTCATTCCTTAGCACTGGG...CGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTATGGCTCGTCTGAACCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTTGTTGGAGAATTTGCTaGAAAGACTTCCCAGCGACT | + |
|
Preference number: 2 (lower is better) Translates to: SMARLNLEDPWSTHSVLVCWRIC*KDFPAT Trigger: AGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACA...AACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGAGCCATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGAGCTCTTGAGTCTGTTTaGTTTAGAGGCAGTGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRALESV*FRGSDS Trigger: ACTATCACTGCCTCTAAACCAAACAGACTCAAGAGC...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTTTAAGAAGTTGGTCTAGGCCTTCTGTTTGGAAGCTGGCATATAGTCTCTGTGCAGTGAAAGTGTaGGGCATGGGGATAAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ASLRSWSRPSVWKLAYSLCAVKV*GMGIRA Trigger: AGCTCTTATCCCCATGCCTCACACTTTCACTGCACA...GAGACTATATGCCAGCTTCCAAACAGAAGGCCTAGACCAACTTCTTAAAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCGAGCAAGCTTTCTGCTaGGCTTCATCCCCAACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: EVTQETSFALFLSAQSVGEQAFC*ASSPTH Trigger: ATGGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTC...GCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GATTGGGGAACTTTCAGGAAGAAAGCAGGTGGCCCCTTCCATAGGAGTTGCATATTTGTACTGAAAATTTaGTTGAAACTCCCCCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: DWGTFRKKAGGPFHRSCIFVLKI*LKLPQA Trigger: GGCCTGGGGGAGTTTCAATCAAATTTTCAGTACAAA...TATGCAACTCCTATGGAAGGGGCCACCTGCTTTCTTCCTGAAAGTTCCCCAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGGAATTGGAAGTAGGTTaGTGCATGCAGACATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PASEPCGVSISISLSLPTELEVG*CMQTLK Trigger: TTTTAATGTCTGCATGCAGCAACCTACTTCCAATTC...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTTGGTCTAGGCCTTCTGTTTGGAAGCTGGCATATAGTCTCAGGAATAGATGATAAGAGCTCCAACTaGACAGGGTTTGGTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: EVGLGLLFGSWHIVSGIDDKSSN*TGFGVC Trigger: GCAGACACCAAACCCTGTCCAGTTGGAGCTCTTATC...ATCTATTCCTGAGACTATATGCCAGCTTCCAAACAGAAGGCCTAGACCAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGATGGAAGGCACAGATGTaGTTAATTCACAGCCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRWKAQM*LIHSHY Trigger: ATAATGGCTGTGAATTAACCACATCTGTGCCTTCCA...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | TTAATGACTGTTTTCTTCCCAGTGCTAAGGAATGAATTCAGGGTCTaGTACATGCTGAGCAAGCTTTCTGCTGAGCTTCATCCCCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LMTVFFPVLRNEFRV*YMLSKLSAELHPQP Trigger: GGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTCAGCATGTACAAGACCCTGAATTCATTCCTTAGCACTGGGAAGAAAACAGTCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | GGAAAAGTAGTTGTCTTGCTTCTTTCTGTAAACAGGCTGTGTTCTTaGCCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GKVVVLLLSVNRLCS*PCSFPQASKASRIS Trigger: TGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGTTTACAGAAAGAAGCAAGACAACTACTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCCTTGAGATTCAGACCTaGAGAACACCACCAGTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: EVTQETSFALFLSAQSVGLEIQT*RTPPVG Trigger: ACCGACTGGTGGTGTTCTTCAGGTCTGAATCTCAAG...GCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTAGGACCGTAAACCACGGTACAGGCTGCTACTaGTGCTTTCTAATGCACATC | + |
|
Preference number: 2 (lower is better) Translates to: IIINWRLGRMSRPRTVNHGTGCY*CFLMHI Trigger: GATGTGCATTAGAAAGCAGCAGTAGCAGCCTGTACC...GTGGTTTACGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTGCCGTGTCGGGAATCAAGGTaGATAGTTTTTCAGCATTGT | + |
|
Preference number: 2 (lower is better) Translates to: FALLFPSSFKGQQDLILPCRESR*IVFQHC Trigger: ACAATGCTGAAAAACTATCCACCTTGATTCCCGACA...CGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGAACAAAATCACAATGTaGTTAACCTGCACATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PASEPCGVSISISLSLPTNKITM*LTCTSV Trigger: AACTGATGTGCAGGTTAACCACATTGTGATTTTGTT...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 90 bp | AGTAGTTGTCTTGCTTCTTTCTGTAAACAGGCTGTGTTCTTTGCCTaGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SSCLASFCKQAVFFA*LFPSSFKGQQDLIL Trigger: CAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGTTTACAGAAAGAAGCAAGACAACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCAGGACTGGTAGGACATaGATTGGCGTTAGAGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: EVTQETSFALFLSAQSVGRTGRT*IGVRGT Trigger: TGTACCTCTAACGCCAATGCATGTCCTACCAGTCCT...GCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTTGGTCTAGGCCTTCTGTTTGGAAGCTGGCATATAGTCTCAGGAATAGATTTCACAGCCATTATGTaGAGTGAAAGTGTGAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: EVGLGLLFGSWHIVSGIDFTAIM*SESVRH Trigger: ATGCCTCACACTTTCACTGCACATAATGGCTGTGAA...ATCTATTCCTGAGACTATATGCCAGCTTCCAAACAGAAGGCCTAGACCAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCGCTGGTTCTTCTGACTaGACATCTCTGCTTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: EVTQETSFALFLSAQSVGAGSSD*TSLLSS Trigger: TGAAGAAAGCAGAGATGTGCAGTCAGAAGAACCAGC...GCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTTGGTCTAGGCCTTCTGTTTGGAAGCTGGCATATAGTCTCAGGAATAGATGTACTCAGGTTTTACTaGGTTTTGTCCAGTCATGTC | + |
|
Preference number: 2 (lower is better) Translates to: EVGLGLLFGSWHIVSGIDVLRFY*VLSSHV Trigger: GACATGACTGGACAAAACCCAGTAAAACCTGAGTAC...ATCTATTCCTGAGACTATATGCCAGCTTCCAAACAGAAGGCCTAGACCAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTAGGATATCCTGTATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTACAGGCTGCTACTGCTaGTTTCTAATGCACATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TRISCIIINWRLGRMSRPTGCYC*FLMHIF Trigger: AAAGATGTGCATTAGAAAGCAGCAGTAGCAGCCTGT...AGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACAGGATATCCTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR CAA 90 bp | GAAGTGGTCCCTGGAAAGTTAATTTGCTGTGCCAATCATAAGGAATaGGAAGTAGGTTGCTGCATGCAGACATTAAAAATGAAGGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: EVVPGKLICCANHKE*EVGCCMQTLKMKVI Trigger: AATGACCTTCATTTTTAATGTCTGCATGCAGCAACCTACTTCCAATTCCTTATGATTGGCACAGCAAATTAACTTTCCAGGGACCACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGGCTGCCTTGCCCATTTaGCTGGAAGTGGGAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PASEPCGVSISISLSLPTAALPI*LEVGGC Trigger: ACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGC...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | CCTTCATCCCAGTTGCCTTACCCCAGATGGCTGCCTTaGCCATTTTGCTGGAAGTGGGAGGCTGTTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSSQLPYPRWLP*PFCWKWEAVGE Trigger: TTCTCCAACAGCCTCCCACTTCCAGCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGCCCTCCTCCTGTCAGTaGCTGCAGGGAACTTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: PASEPCGVSISISLSLPTPSSCQ*LQGTYL Trigger: TAAGTAAGTTCCCTGCAGCAACTGACAGGAGGAGGG...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | GTTGCAGCACAGCTGAAATCAGACTGTCACCTGCCTTaGGATTCAGACCTGAAGAACACCACCAGTCGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAAQLKSDCHLP*DSDLKNTTSRS Trigger: GGACCGACTGGTGGTGTTCTTCAGGTCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | CTCCTCCTGTCAGTTGCTGCAGGGAACTTACTTAACTaGACTGTCATGTGGCCCTTAAAGGGGAGCAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LLLSVAAGNLLN*TVMWPLKGSRL Trigger: TAGCCTGCTCCCCTTTAAGGGCCACATGACAGTGCAGTTAAGTAAGTTCCCTGCAGCAACTGACAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | CCTGGAAGATCCATGGAGCACTCATTCAGTCCTGGTTaGAGCACAGCTGAAATCAGACTGTCACCTGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PGRSMEHSFSPG*STAEIRLSPAL Trigger: CAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACCAGGACTGAATGAGTGCTCCATGGATCTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | GAAGACTATTCTTGGTTCCAAGGGAACTGTGGACTCTaGCCCTCCTCCTGTCAGTTGCTGCAGGGAACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: EDYSWFQGNCGL*PSSCQLLQGTY Trigger: GTAAGTTCCCTGCAGCAACTGACAGGAGGAGGGTCAGAGTCCACAGTTCCCTTGGAACCAAGAATAGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | CATGGAGCACTCATTCAGTCCTGGTTGCAGCACAGCTaGAATCAGACTGTCACCTGCCTTGAGATTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: HGALIQSWLQHS*NQTVTCLEIQT Trigger: GGTCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACCAGGACTGAATGAGTGCTCCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGGCCAATCATAAGGAATaGGAAGTAGGTTGCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PASEPCGVSISISLSLPTANHKE*EVGCCM Trigger: CATGCAGCAACCTACTTCCAATTCCTTATGATTGGC...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | TGGAGGACTGCTTCATTCACATCAGTATGGCTCGTCTaGACCTGGAAGATCCATGGAGCACTCATTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WRTASFTSVWLV*TWKIHGALIQS Trigger: GGACTGAATGAGTGCTCCATGGATCTTCCAGGTTCAGACGAGCCATACTGATGTGAATGAAGCAGTCCTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | AGCAAGGAAGGGGTAAGAGCTCTGTATGTGGAGGACTaGTTCATTCACATCAGTATGGCTCGTCTGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKEGVRALYVED*FIHISMARLNL Trigger: CAGGTTCAGACGAGCCATACTGATGTGAATGAAGCAGTCCTCCACATACAGAGCTCTTACCCCTTCCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | CTTGGTAGGATGAGTAGGCCTAGGACCGTAAACCACTaGTACAGGCTGCTACTGCTGCTTTCTAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGRMSRPRTVNH*YRLLLLLSNAH Trigger: ATGTGCATTAGAAAGCAGCAGTAGCAGCCTGTACCAGTGGTTTACGGTCCTAGGCCTACTCATCCTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR TCA 72 bp | TCCAACTGGACAGGGTTTGGTGTCTGCTTGGAAATGTaGCCTTCTTCCTGCAAATACCATGTCACAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNWTGFGVCLEM*PSSCKYHVTGR Trigger: TCTGCCTGTGACATGGTATTTGCAGGAAGAAGGTCACATTTCCAAGCAGACACCAAACCCTGTCCAGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | AAGAACACCACCAGTCGGTCCATCTCTTACACAGGCTaGCCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KNTTSRSISYTG*PISPGVQSLFL Trigger: CAAAAACAGACTCTGAACACCAGGAGAAATCGGTCAGCCTGTGTAAGAGATGGACCGACTGGTGGTGTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | ATTTTGCTGGAAGTGGGAGGCTGTTGGAGAATTTGCTaGAAAGACTTCCCAGCGACTATGATGCATCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILLEVGGCWRIC*KDFPATMMHPA Trigger: TGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAACAGCCTCCCACTTCCAGCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGAACCTGCACATCAGTTaGAGAAGTATATTGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PASEPCGVSISISLSLPTNLHIS*RSILIA Trigger: AGCAATCAATATACTTCTCAAACTGATGTGCAGGTT...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | GTTGGAGAATTTGCTGGAAAGACTTCCCAGCGACTATaGTGCATCCTGCAGCTGCAAAGCTATTTCAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGEFAGKTSQRL*CILQLQSYFKP Trigger: AGGCTTGAAATAGCTTTGCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCTCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | TTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTaGCGATGTGGCCACAATGTCTTCTCTAATCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FPQASKASRISF*RCGHNVFSNQS Trigger: TGACTGATTAGAGAAGACATTGTGGCCACATCGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | TTGCTTCTTTCTGTAAACAGGCTGTGTTCTTTGCCTTaGTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LLLSVNRLCSLP*SFPQASKASRI Trigger: GATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGTTTACAGAAAGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | ATAATCAGGAAGTGGTCTACTTTATTCAGCATTCCATaGGTGGAAGAGGGTTCCTTGGGCCTGCACTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IIRKWSTLFSIP*VEEGSLGLHCS Trigger: TGAACAGTGCAGGCCCAAGGAACCCTCTTCCACCCATGGAATGCTGAATAAAGTAGACCACTTCCTGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | TCTTCCTGCAAATACCATGTCACAGGCAGAACATTCTaGTTAGTACACAGGCACTCATGGTTGGATACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSCKYHVTGRTF*LVHRHSWLDTE Trigger: CTCAGTATCCAACCATGAGTGCCTGTGTACTAAGCAGAATGTTCTGCCTGTGACATGGTATTTGCAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | TTCACGGGGACTAGGATATCCTGTATAATTATAAACTaGAGGCTTGGTAGGATGAGTAGGCCTAGGACCGTA | + |
|
Preference number: 3 (lower is better) Translates to: FTGTRISCIIIN*RLGRMSRPRTV Trigger: TACGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACAGGATATCCTAGTCCCCGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR CCA 72 bp | ATAAGAGCTCCAACTGGACAGGGTTTGGTGTCTGCTTaGAAATGTGACCTTCTTCCTGCAAATACCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IRAPTGQGLVSA*KCDLLPANTMS Trigger: TGACATGGTATTTGCAGGAAGAAGGTCACATTTCCAAGCAGACACCAAACCCTGTCCAGTTGGAGCTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTGCCGGATAGTTTTTCAGCATaGTCTGTGTGGCAATATGTT | + |
|
Preference number: 3 (lower is better) Translates to: FALLFPSSFKGQQDLILPDSFSA*SVWQYV Trigger: AACATATTGCCACACAGACAATGCTGAAAAACTATC...CGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTGCTGGAAAGACTTCCCAGCGACTATGATGCATCCTGCAGCTGCAAAGAGTTTGAGAAGTATATaGATTGCTATGGGAGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RICWKDFPATMMHPAAAKSLRSI*IAMGAY Trigger: GTAGGCTCCCATAGCAATCAATATACTTCTCAAACT...CTTTGCAGCTGCAGGATGCATCATAGTCGCTGGGAAGTCTTTCCAGCAAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | AGTCACACAGGAAACAAGCTTTGCATTGTTTTTGTCTaGTCAAAGTGTTGGCTGTATGGCTGTCATCTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SHTGNKLCIVFV*SKCWLYGCHLR Trigger: ACGCAGATGACAGCCATACAGCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | CTCACATTGGTCTTAATACCTGTACTCAGGTTTTACTaGGTTTTGTCCAGTCATGTCGGGAATCAAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTLVLIPVLRFY*VLSSHVGNQGG Trigger: TCCACCTTGATTCCCGACATGACTGGACAAAACCCAGTAAAACCTGAGTACAGGTATTAAGACCAATGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | AACAAGCTTTGCATTGTTTTTGTCTGCTCAAAGTGTTaGCTGTATGGCTGTCATCTGCGTCTGACAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NKLCIVFVCSKC*LYGCHLRLTGK Trigger: TTTGCCTGTCAGACGCAGATGACAGCCATACAGCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | TTACTGGGTTTTGTCCAGTCATGTCGGGAATCAAGGTaGATAGTTTTTCAGCATTGTCTGTGTGGCAATATG | + |
|
Preference number: 3 (lower is better) Translates to: LLGFVQSCRESR*IVFQHCLCGNM Trigger: CATATTGCCACACAGACAATGCTGAAAAACTATCCACCTTGATTCCCGACATGACTGGACAAAACCCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | TTGCATTGTTTTTGTCTGCTCAAAGTGTTGGCTGTATaGCTGTCATCTGCGTCTGACAGGCAAAATGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHCFCLLKVLAV*LSSASDRQNDS Trigger: AGAATCATTTTGCCTGTCAGACGCAGATGACAGCCATACAGCCAACACTTTGAGCAGACAAAAACAATGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCACAGTGAAGAGGCAGAAGACTGTCAGATACTTAAACAGTCCACAGGAGAGCTCTCTGGTAGAATaGCTTATTTCCCTTAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: NVTVKRQKTVRYLNSPQESSLVE*LISLKP Trigger: AGGTTTAAGGGAAATAAGCAATTCTACCAGAGAGCT...CTCCTGTGGACTGTTTAAGTATCTGACAGTCTTCTGCCTCTTCACTGTGACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | GGAATCAAGGTGGATAGTTTTTCAGCATTGTCTGTGTaGCAATATGTTCACCTGCTGTATGTAAACAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIKVDSFSALSV*QYVHLLYVNKQ Trigger: TTGCTTGTTTACATACAGCAGGTGAACATATTGCCACACAGACAATGCTGAAAAACTATCCACCTTGATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CCA 72 bp | AATTCTAAAGATGAAAGATTAGCAGAGACAGAAGGTTaGAGCTCTAGGCTGAGGGATGTTACTAAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSKDERLAETEG*SSRLRDVTKWE Trigger: TTCCCATTTAGTAACATCCCTCAGCCTAGAGCTCCAACCTTCTGTCTCTGCTAATCTTTCATCTTTAGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | GTTCAACTAAGCATTAGATACGCCCTAAATTCCCAATaGACTCCAAACACTAGAGTTCCTGTTTATAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VQLSIRYALNSQ*TPNTRVPVYSG Trigger: ACCACTATAAACAGGAACTCTAGTGTTTGGAGTTCATTGGGAATTTAGGGCGTATCTAATGCTTAGTTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | CACCTGCTGTATGTAAACAAGCAAGAAGGGAAATTATaGATTCACTTGTTCCACCAAGTATTATATATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HLLYVNKQEGKL*IHLFHQVLYIP Trigger: GGGGATATATAATACTTGGTGGAACAAGTGAATGCATAATTTCCCTTCTTGCTTGTTTACATACAGCAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | CAAACACTAGAGTTCCTGTTTATAGTGGTTCAGCATTaGAATGTACAACAGTTTTCAGAGCTATTCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QTLEFLFIVVQH*NVQQFSELFLT Trigger: TGTGAGGAATAGCTCTGAAAACTGTTGTACATTGCAATGCTGAACCACTATAAACAGGAACTCTAGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | TCCACTGATAGTTTATTTCAACCCTTCAGTAGGCGGTaGAAAAGTTCTATAAAACTGTTCAGAGATTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: STDSLFQPFSRR*KSSIKLFRDLP Trigger: TGGCAAATCTCTGAACAGTTTTATAGAACTTTTTCACCGCCTACTGAAGGGTTGAAATAAACTATCAGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR GCA 72 bp | ATTTGCTGTGCCAATCATAAGGAATTGGAAGTAGGTTaGTGCATGCAGACATTAAAAATGAAGGTCATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ICCANHKELEVG*CMQTLKMKVIK Trigger: CTTAATGACCTTCATTTTTAATGTCTGCATGCAGCAACCTACTTCCAATTCCTTATGATTGGCACAGCAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | ATCAAGGTACTATCAGACACAAACGCTTCAGAAATATaGAGGAAAAGTAGTTGTCTTGCTTCTTTCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKVLSDTNASEI*RKSSCLASFCK Trigger: TTTACAGAAAGAAGCAAGACAACTACTTTTCCTTCATATTTCTGAAGCGTTTGTGTCTGATAGTACCTTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR TCA 72 bp | AATATTCTCATTGAATACTTAAACTTTGCCATATCCTaGTGTCCTGAGAAGCAAATTGAAACCAGAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: NILIEYLNFAIS*CPEKQIETRTP Trigger: AGGTGTTCTGGTTTCAATTTGCTTCTCAGGACATCAGGATATGGCAAAGTTTAAGTATTCAATGAGAATATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 72 bp | GCTGCTCAGGAAGCTTCTTCTAAGCCTTCATCCCAGTaGCCTTACCCCAGATGGCTGCCTTGCCCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAQEASSKPSSQ*PYPRWLPCPFC Trigger: GCAAAATGGGCAAGGCAGCCATCTGGGGTAAGGCAACTGGGATGAAGGCTTAGAAGAAGCTTCCTGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 72 bp | GGTTGCAGCACAGCTGAAATCAGACTGTCACCTGCCTaGAGATTCAGACCTGAAGAACACCACCAGTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSTAEIRLSPA*RFRPEEHHQSV Trigger: GACCGACTGGTGGTGTTCTTCAGGTCTGAATCTCAAGGCAGGTGACAGTCTGATTTCAGCTGTGCTGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGACCGTAAACCACTGGTACAGGCTGCTACTGCTGCTTTCTAATGCACATCTTCTGCGACAGGGGTaGGTTGAGTCTGGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRTVNHWYRLLLLLSNAHLLRQG*VESGIR Trigger: TCTTATGCCAGACTCAACGCACCCCTGTCGCAGAAG...ATGTGCATTAGAAAGCAGCAGTAGCAGCCTGTACCAGTGGTTTACGGTCCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTTGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGATCTCATTTTGCCGAGCTCGAGCACCCCATaGAAAGCTGCCATCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FALLFPSSFKGQQDLILPSSSTP*KAAIYV Trigger: TACATAGATGGCAGCTTTTCATGGGGTGCTCGAGCT...CGGCAAAATGAGATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGGTAGGATGAGTAGGCCTAGGACCGTAAACCACTGGTACAGGCTGCTAAAACTTATCTGGCCCTaGGGTAGGATCACAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLGRMSRPRTVNHWYRLLKLIWP*GRITTV Trigger: TACAGTTGTGATCCTACCCCAGGGCCAGATAAGTTT...TAGCAGCCTGTACCAGTGGTTTACGGTCCTAGGCCTACTCATCCTACCAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTAGACTACAGAGGAACAGCTGTACACAGAACTGGCTCTCTCCTTCGAGACAGGCATCAGATAAATaGGACAGCAGAAACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRLQRNSCTQNWLSPSRQASDK*DSRNRR Trigger: CCTTCTGTTTCTGCTGTCTCATTTATCTGATGCCTG...TCTCGAAGGAGAGAGCCAGTTCTGTGTACAGCTGTTCCTCTGTAGTCTACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCAGAACCTTGTGGTGTCAGCATCAGCATCAGCCTATCACTTCCTACGGACCCATGTATGATTTaGCTCACAGGTAGCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PASEPCGVSISISLSLPTDPCMI*LTGSNH Trigger: ATGATTGCTACCTGTGAGCCAAATCATACATGGGTC...CGTAGGAAGTGATAGGCTGATGCTGATGCTGACACCACAAGGTTCTGAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGTACATGCTGAGCAAGCTTTCTGCTGAGCTTCATCCCCAACCCATGAACAAGGGAAAACTTATCTaGCCCTGGGGTAGGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLYMLSKLSAELHPQPMNKGKLI*PWGRIT Trigger: TGTGATCCTACCCCAGGGCCAGATAAGTTTTCCCTT...GTTCATGGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTCAGCATGTACAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGTCTTGTACATGCTGAGCAAGCTTTCTGCTGAGCTTCATCCCCAACCCTTTGTTTTCTTCCTGTaGTCAAAACACCTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FRVLYMLSKLSAELHPQPFVFFL*SKHLST Trigger: TGTGCTCAGGTGTTTTGAGCACAGGAAGAAAACAAA...GGGTTGGGGATGAAGCTCAGCAGAAAGCTTGCTCAGCATGTACAAGACCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| 3UTR CAA 72 bp | CTTGCTTCTTTCTGTAAACAGGCTGTGTTCTTTGCCTaGCTCTTTCCCTCAAGCTTCAAAGGCCAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LASFCKQAVFFA*LFPSSFKGQQD Trigger: ATCCTGCTGGCCTTTGAAGCTTGAGGGAAAGAGCAAGGCAAAGAACACAGCCTGTTTACAGAAAGAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGATTGGGGAACTTTCAGGAAGAAAGCAGGTGGCCCCTTCCATAGGAGTTAGCAATCATCAGGTATaGAGACAGATACAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: FMIGELSGRKQVAPSIGVSNHQV*RQIQVS Trigger: GGATACCTGTATCTGTCTCCATACCTGATGATTGCT...AACTCCTATGGAAGGGGCCACCTGCTTTCTTCCTGAAAGTTCCCCAATCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCCTGTGCTCAAAACACCTGAGCACAATGAGACAAAGTATAAAAACTCCAGCTCGAGCACCCCATaGAAAGCTGCCATCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLPVLKTPEHNETKYKNSSSSTP*KAAIYV Trigger: TACATAGATGGCAGCTTTTCATGGGGTGCTCGAGCT...GGAGTTTTTATACTTTGTCTCATTGTGCTCAGGTGTTTTGAGCACAGGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR GCA 90 bp | TTTATAGTGGTTCAGCATTGCAATGTACAACAGTTTTCAGAGCTATTCCTCACACTTCTGCGACAGGGGTaGGTTGAGTCTGGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIVVQHCNVQQFSELFLTLLRQG*VESGIR Trigger: TCTTATGCCAGACTCAACGCACCCCTGTCGCAGAAG...TGTGAGGAATAGCTCTGAAAACTGTTGTACATTGCAATGCTGAACCACTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTAGGACCGTAAACCACGACCCATGTATGATTTaGCTCACAGGTAGCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIINWRLGRMSRPRTVNHDPCMI*LTGSNH Trigger: ATGATTGCTACCTGTGAGCCAAATCATACATGGGTC...GTGGTTTACGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR CAA 72 bp | TGTGAAGTCACACAGGAAACAAGCTTTGCATTGTTTTaGTCTGCTCAAAGTGTTGGCTGTATGGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CEVTQETSFALF*SAQSVGCMAVI Trigger: GATGACAGCCATACAGCCAACACTTTGAGCAGACAAAAACAATGCAAAGCTTGTTTCCTGTGTGACTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | TGTATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTAGGACCGTAAACAGCAATCATCAGGTATaGAGACAGATACAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: CIIINWRLGRMSRPRTVNSNHQV*RQIQVS Trigger: GGATACCTGTATCTGTCTCCATACCTGATGATTGCT...GTTTACGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR GCA 90 bp | TGTATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTAGGACCGTAAACCACCCCATGAAAAGCTaGCATCTATGTAGTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: CIIINWRLGRMSRPRTVNHPMKS*HLCSIL Trigger: AAGTATACTACATAGATGGCAGCTTTTCATGGGGTG...GTTTACGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGTATAATTATAAACTGGAGGCTTGGTAGGATGAGTAGGCCTAGGACCAGATCACCATGCTACTaGCTTCCATGTAAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCIIINWRLGRMSRPRTRSPCY*LPCKIL Trigger: AAGGATTTTACATGGAAGGCAGTAGCATGGTGATCT...GGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACAGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTTGGTCTAGGCCTTCTGTTTGGAAGCTGGCATATAGTCTCAGGAATAGATCTATGTAGTATACTTTaGCAAATGAAGGGTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVGLGLLFGSWHIVSGIDLCSIL*QMKGLV Trigger: TACAAGACCCTTCATTTGGCAAAGTATACTACATAG...ATCTATTCCTGAGACTATATGCCAGCTTCCAAACAGAAGGCCTAGACCAACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGATCCAGTTTTCAAAAATGGAACAGTAATGACTTCCACACATGAGATTAAGGGAAAACTTATCTaGCCCTGGGGTAGGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: LEDPVFKNGTVMTSTHEIKGKLI*PWGRIT Trigger: TGTGATCCTACCCCAGGGCCAGATAAGTTTTCCCTT...AATCTCATGTGTGGAAGTCATTACTGTTCCATTTTTGAAAACTGGATCTTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGAACAGTAATGACTTCCACACATGAGATTTTCATCTTGCTGCAGATACAGGCATCAGATAAATaGGACAGCAGAAACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTVMTSTHEIFILLQIQASDK*DSRNRR Trigger: CCTTCTGTTTCTGCTGTCTCATTTATCTGATGCCTG...TATCTGCAGCAAGATGAAAATCTCATGTGTGGAAGTCATTACTGTTCCATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| 3UTR CAA 72 bp | TGCAATGTACAACAGTTTTCAGAGCTATTCCTCACATaGGTCTTAATACCTGTACTCAGGTTTTACTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CNVQQFSELFLT*VLIPVLRFYWV Trigger: AACCCAGTAAAACCTGAGTACAGGTATTAAGACCAATGTGAGGAATAGCTCTGAAAACTGTTGTACATTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGAACAGTAATGACTTCCACACATGAGATTTTCATCTTGCTGCAGATATATTTCGCCAGCTCCTaGTATCAGTCTTCCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTVMTSTHEIFILLQIYFASS*YQSSIL Trigger: CAAAATGGAAGACTGATATCAGGAGCTGGCGAAATA...TATCTGCAGCAAGATGAAAATCTCATGTGTGGAAGTCATTACTGTTCCATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAGAAGTATATTGATTGCTATGGGAGCCTACAGAAGGAATTCTTCATGGTTACCTTTAAGACATTTTaGGATAGATGGCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FEKYIDCYGSLQKEFFMVTFKTF*DRWLPR Trigger: TCTTGGGAGCCATCTATCCCAAAATGTCTTAAAGGT...AACCATGAAGAATTCCTTCTGTAGGCTCCCATAGCAATCAATATACTTCTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAAACACACACATTACCACAAATGAAGCTCCTGCAAATATATAATTTTGCGAGATCACCATGCTACTaGCTTCCATGTAAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LETHTLPQMKLLQIYNFARSPCY*LPCKIL Trigger: AAGGATTTTACATGGAAGGCAGTAGCATGGTGATCT...CGCAAAATTATATATTTGCAGGAGCTTCATTTGTGGTAATGTGTGTGTTTCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCAAATATATAATTTTGCGTTTGCCAGACTTGAAGATCCAGTTTTCAAAGACTTTAAGACATTTTaGGATAGATGGCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQIYNFAFARLEDPVFKDFKTF*DRWLPR Trigger: TCTTGGGAGCCATCTATCCCAAAATGTCTTAAAGTC...TTTGAAAACTGGATCTTCAAGTCTGGCAAACGCAAAATTATATATTTGCAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGAACAGTAATGACTTCCACACATGAGATTTTCATCTTGCTGCAGATACTATGTAGTATACTTTaGCAAATGAAGGGTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNGTVMTSTHEIFILLQILCSIL*QMKGLV Trigger: TACAAGACCCTTCATTTGGCAAAGTATACTACATAG...TATCTGCAGCAAGATGAAAATCTCATGTGTGGAAGTCATTACTGTTCCATTTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||
| CDS CCA 90 bp | AAATATTCCTTCACGGGGACTAGGATATCCTGTATAATTATAAACTaGAGGCTTGGTAGGATGAGTAGGCCTAGGACCTTTAAGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: KYSFTGTRISCIIIN*RLGRMSRPRTFKTF Trigger: AAATGTCTTAAAGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACAGGATATCCTAGTCCCCGTGAAGGAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCAAATATATAATTTTGCGTTTGCCAGACTTGAAGATCCAGTTTTCAAATTCCATGTAAAATCCTaGCAAACACTCAAACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQIYNFAFARLEDPVFKFHVKS*QTLKHH Trigger: GTGATGTTTGAGTGTTTGCAAGGATTTTACATGGAA...TTTGAAAACTGGATCTTCAAGTCTGGCAAACGCAAAATTATATATTTGCAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGATCCAGTTTTCAAAAATGGAACAGTAATGACTTCCACACATGAGATTTTCCATGTAAAATCCTaGCAAACACTCAAACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEDPVFKNGTVMTSTHEIFHVKS*QTLKHH Trigger: GTGATGTTTGAGTGTTTGCAAGGATTTTACATGGAA...AATCTCATGTGTGGAAGTCATTACTGTTCCATTTTTGAAAACTGGATCTTCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS CAA 72 bp | TACTCCAGGTGTTATGGCCAGCACAGAATATCATGCTaGTTCCAACAAGGGAAAACTTATCTGGCCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: YSRCYGQHRISC*FQQGKTYLALG Trigger: CCCCAGGGCCAGATAAGTTTTCCCTTGTTGGAACAAGCATGATATTCTGTGCTGGCCATAACACCTGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS CAA 90 bp | TTTCGCCAGCTCCTGATATCAGTCTTCCATTTTGTAGTACTGGATTaGGACATTTTACCACTTTACACTCCGGAGGGCTGTTACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRQLLISVFHFVVLD*DILPLYTPEGCYSR Trigger: CCTGGAGTAACAGCCCTCCGGAGTGTAAAGTGGTAAAATGTCCAAATCCAGTACTACAAAATGGAAGACTGATATCAGGAGCTGGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS GCA 72 bp | TGTTACTCCAGGTGTTATGGCCAGCACAGAATATCATaGTTGTTCCAACAAGGGAAAACTTATCTGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CYSRCYGQHRIS*LFQQGKTYLAL Trigger: CAGGGCCAGATAAGTTTTCCCTTGTTGGAACAAGCATGATATTCTGTGCTGGCCATAACACCTGGAGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159563.8 ENSMUST00000162650.8 |
||
| CDS CCA 72 bp | TTCACGGGGACTAGGATATCCTGTATAATTATAAACTaGAGGCTTGGTAGGATGAGTAGGCCTAGGACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FTGTRISCIIIN*RLGRMSRPRTF Trigger: AAAGGTCCTAGGCCTACTCATCCTACCAAGCCTCCAGTTTATAATTATACAGGATATCCTAGTCCCCGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162650.8 |
||
| CDS CCA 72 bp | TCAATAAAAAGTGACTTTAAGACATTTTGGGATAGATaGCTCCCAAGAGTTATTAGCACTACAGATCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: SIKSDFKTFWDR*LPRVISTTDHH Trigger: ATGGTGATCTGTAGTGCTAATAACTCTTGGGAGCCATCTATCCCAAAATGTCTTAAAGTCACTTTTTATTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159563.8 |
||