Pregenerated sensors for CD44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005087Ensembl transcript IDs: ENSMUST00000005218.15, ENSMUST00000060516.14, ENSMUST00000099673.9, ENSMUST00000111190.9, ENSMUST00000111191.9, ENSMUST00000111192.3, ENSMUST00000111194.8, ENSMUST00000111198.9
Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGGGCATCAAGGGGTCATGGAGAGCTTGACAGAGCCCTTTTATaGCCAATCCCAGAGTGGCTTGCTGCATATAGGTTAAAGAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QRASRGHGELDRALL*PIPEWLAAYRLKSP Trigger: GGGGCTCTTTAACCTATATGCAGCAAGCCACTCTGGGATTGGTCATAAAAGGGCTCTGTCAAGCTCTCCATGACCCCTTGATGCCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR CCA 90 bp | AGTACACCTGATCTCCCACCCCGCTGGAAAGCAATGCCTAAGGATTaGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: STPDLPPRWKAMPKD*TAGEAIWTHSNFLP Trigger: TGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGGGTGGGAGATCAGGTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CCA 90 bp | CGCTGGAAAGCAATGCCTAAGGATTGGACTGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTCCCAGAGACCAATCTAGGTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: RWKAMPKDWTAGEAI*THSNFLPETNLGSG Trigger: CCCAGAACCTAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CCA 90 bp | AATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTAGGTTCTaGGGAAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: NMDPFKFPPRDQSRF*GKSLAGGCSLGLWV Trigger: TACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTTCCCCAGAACCTAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CCA 90 bp | GATGGGGGTTGTACATCACACCTCCTCCTCGTGGCAAGCTACTGCTaGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGA | + |
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Preference number: 1 (lower is better) Translates to: DGGCTSHLLLVASYC*MFTLSFLLASPFMR Trigger: TCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAGCTTGCCACGAGGAGGAGGTGTGATGTACAACCCCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR TCA 90 bp | CACACTGATGTGCTACAAAGACTCAGACTTTGCTTGTTTAGAAACTaGAGGATCACAGCACAACGGGTCAAGATGGAAGATGGACCGGTA | + |
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Preference number: 1 (lower is better) Translates to: HTDVLQRLRLCLFRN*RITAQRVKMEDGPV Trigger: TACCGGTCCATCTTCCATCTTGACCCGTTGTGCTGTGATCCTTCAGTTTCTAAACAAGCAAAGTCTGAGTCTTTGTAGCACATCAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CCA 90 bp | CCTATGGTAGCATACCCTGGTAATGCAAGGCCCCTAGGAAGGAACTaGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCTCATTT | + |
|
Preference number: 1 (lower is better) Translates to: PMVAYPGNARPLGRN*KSQILNGVLFGPSF Trigger: AAATGAGGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGGCCTTGCATTACCAGGGTATGCTACCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR TCA 90 bp | CTAGAACATACAAAATATGGACATGAAGGTATCTTTCACCTCATTTaGTTTTTACCCAAGGCAAAGAGAAGGAAAGCCTCCAGGATATAT | + |
|
Preference number: 1 (lower is better) Translates to: LEHTKYGHEGIFHLI*FLPKAKRRKASRIY Trigger: ATATATCCTGGAGGCTTTCCTTCTCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATTTTGTATGTTCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCAGCACATTGCATCTGTaGAGGGTCCCAGCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FNEIELGEPSRLRCSSMSSTLHL*RVPAPR Trigger: CCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCT...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACTCTCTCAGAAGCATCTaGAAATTTTCCAGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KSPREPVVGVVGQDSSKDSLRSI*KFSSRR Trigger: CCTTCTGCTGGAAAATTTTCAGATGCTTCTGAGAGA...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCCCCGCTGGAAAGCAATaGCTAAGGATTGGACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFPAGKQ*LRIGLL Trigger: CAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGG...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCTTTGAGAGCCTGGAATaGAAACAGTGCTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFFESLE*KQCSCP Trigger: GGGACAGGAGCACTGTTTTCATTCCAGGCTCTCAAA...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCAGCACATTGCATCTGTaGAGGGTCCCAGCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: APQVPTTMFCEITNKIILSTLHL*RVPAPR Trigger: CCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCT...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCGGGAAAATCCTTAGCTaGTGGATGTTCCCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFGKILS*WMFPGT Trigger: AGTCCCAGGGAACATCCACCAGCTAAGGATTTTCCC...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCTCAATGAGATTGAGCTaGGTGAACCCAGCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFSMRLS*VNPAGS Trigger: TGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGA...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCGGAGAGAAACCCCTTTaGGAGCCTGGAATGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFGEKPL*EPGMKT Trigger: TGTTTTCATTCCAGGCTCTCAAAGGGGTTTCTCTCC...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTGTACCAACTCGCTTGTaGAAGCACCAACAAACACAG | + |
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Preference number: 2 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLVPTRL*KHQQTQ Trigger: CTGTGTTTGTTGGTGCTTTCACAAGCGAGTTGGTAC...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCCCAGCAGGCTCAGATaGTCTAGCATGAGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: EKAPQVPTTMFCEITNKIPSRLR*SSMSLG Trigger: TCCTAAGCTCATGCTAGAGCATCTGAGCCTGCTGGG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCTGTTCCCTGGGACTTTaGGTAGGGATAAGGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: DWTAGEAIWTHSNFLPETCSLGL*VGIRFN Trigger: ATTGAACCTTATCCCTACCCAAAGTCCCAGGGAACA...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CAA 90 bp | CTTGCCTACTCTCACTTCAGATTCTTGAACAGGAGAGAAACCCCTTaGAGAGCCTGGAATGAAAACAGTGCTCCTGTCCCTGATCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LAYSHFRFLNRRETP*RAWNENSAPVPDLQ Trigger: TTGAAGATCAGGGACAGGAGCACTGTTTTCATTCCAGGCTCTCAAAGGGGTTTCTCTCCTGTTCAAGAATCTGAAGTGAGAGTAGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCATACTAAGGCCACACTaGTGTGCTACAAAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFILRPH*CATKTQ Trigger: CTGAGTCTTTGTAGCACATCAGTGTGGCCTTAGTAT...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTTGTTCCCTGGGACTTTaGGTAGGGATAAGGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLCSLGL*VGIRFN Trigger: ATTGAACCTTATCCCTACCCAAAGTCCCAGGGAACA...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFAGEAI*THSNFL Trigger: GAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGC...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCAGGACCTCCAGGGTTTaGTATTTCAAAAACAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FNEIELGEPSRLRCSSMSRTSRV*YFKNKD Trigger: ATCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCT...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTCCCGCTGGAAAGCAATaGCTAAGGATTGGACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCPAGKQ*LRIGLL Trigger: CAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGG...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTAAAGGGACTGAAGCTTaGCTACTCTCACTTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLKGTEA*LLSLQI Trigger: AATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTT...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACGGGAAAATCCTTAGCTaGTGGATGTTCCCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: WMFTLSFLLASPFMRRRHGKILS*WMFPGT Trigger: AGTCCCAGGGAACATCCACCAGCTAAGGATTTTCCC...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCTCAATGAGATTGAGCTaGGTGAACCCAGCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: CWMFTLSFLLASPFMRRRSMRLS*VNPAGS Trigger: TGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGA...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCACCCCTTTGAGAGCCTaGAATGAAAACAGTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EKAPQVPTTMFCEITNKITPLRA*NENSAP Trigger: AGGAGCACTGTTTTCATTCCAGGCTCTCAAAGGGGT...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGCACACCTCCTCCTCGTaGCAAGCTACTGCTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: YEGNSILLLLNHKPAYLMHTSSS*QATAGC Trigger: ACATCCAGCAGTAGCTTGCCACGAGGAGGAGGTGTG...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCTGCTTGTTTAGAAACTaGAGGATCACAGCACAACGG | + |
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Preference number: 2 (lower is better) Translates to: EKAPQVPTTMFCEITNKICLFRN*RITAQR Trigger: CCGTTGTGCTGTGATCCTTCAGTTTCTAAACAAGCA...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCGGAGAGAAACCCCTTTaGGAGCCTGGAATGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CWMFTLSFLLASPFMRRRGEKPL*EPGMKT Trigger: TGTTTTCATTCCAGGCTCTCAAAGGGGTTTCTCTCC...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGCCCGCTGGAAAGCAATaGCTAAGGATTGGACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKPAGKQ*LRIGLL Trigger: CAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGG...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGCCCAGCAGGCTCAGATaGTCTAGCATGAGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKPSRLR*SSMSLG Trigger: TCCTAAGCTCATGCTAGAGCATCTGAGCCTGCTGGG...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAAGGAAAGCCTCCAGGATATATGAGAAATTTATAGTTGATGGCAAAAGAAGCACATTGCATCTGTaGAGGGTCCCAGCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KRRKASRIYEKFIVDGKRSTLHL*RVPAPR Trigger: CCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCT...TCTTTTGCCATCAACTATAAATTTCTCATATATCCTGGAGGCTTTCCTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCTGTTCCCTGGGACTTTaGGTAGGGATAAGGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: EKAPQVPTTMFCEITNKICSLGL*VGIRFN Trigger: ATTGAACCTTATCCCTACCCAAAGTCCCAGGGAACA...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACGCAATGCCTAAGGATTaGACTGCTGGAGAGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: WMFTLSFLLASPFMRRRHAMPKD*TAGEAI Trigger: TATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGC...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTTTTGAGAGCCTGGAATaGAAACAGTGCTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TKSWSNSKSDCATRIITTFESLE*KQCSCP Trigger: GGGACAGGAGCACTGTTTTCATTCCAGGCTCTCAAA...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGTTTGAGAGCCTGGAATaGAAACAGTGCTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRFESLE*KQCSCP Trigger: GGGACAGGAGCACTGTTTTCATTCCAGGCTCTCAAA...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGTTTGAGAGCCTGGAATaGAAACAGTGCTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKFESLE*KQCSCP Trigger: GGGACAGGAGCACTGTTTTCATTCCAGGCTCTCAAA...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTAGGGAGGCTAGAATATaGGTAAGGAGAGCTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TKSWSNSKSDCATRIITTREARI*VRRAEA Trigger: AGCCTCAGCTCTCCTTACTCATATTCTAGCCTCCCT...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCAAGGCCACACTGATGTaGTACAAAGACTCAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: EKAPQVPTTMFCEITNKIKATLM*YKDSDF Trigger: AAAGTCTGAGTCTTTGTAGCACATCAGTGTGGCCTT...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGGGGAAAATCCTTAGCTaGTGGATGTTCCCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRGKILS*WMFPGT Trigger: AGTCCCAGGGAACATCCACCAGCTAAGGATTTTCCC...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WMFTLSFLLASPFMRRRHAGEAI*THSNFL Trigger: GAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGC...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCAAGGCCACACTGATGTaGTACAAAGACTCAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: CWMFTLSFLLASPFMRRRKATLM*YKDSDF Trigger: AAAGTCTGAGTCTTTGTAGCACATCAGTGTGGCCTT...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACAAAGGGACTGAAGCTTaGCTACTCTCACTTCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: WMFTLSFLLASPFMRRRHKGTEA*LLSLQI Trigger: AATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTT...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCAGEAI*THSNFL Trigger: GAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGC...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCAATGCCTAAGGATTaGACTGCTGGAGAGGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKAMPKD*TAGEAI Trigger: TATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGC...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGACCCCTTTGAGAGCCTaGAATGAAAACAGTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRTPLRA*NENSAP Trigger: AGGAGCACTGTTTTCATTCCAGGCTCTCAAAGGGGT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGTGCTTGTTTAGAAACTaGAGGATCACAGCACAACGG | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRCLFRN*RITAQR Trigger: CCGTTGTGCTGTGATCCTTCAGTTTCTAAACAAGCA...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGATACTAAGGCCACACTaGTGTGCTACAAAGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKILRPH*CATKTQ Trigger: CTGAGTCTTTGTAGCACATCAGTGTGGCCTTAGTAT...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTCTCGTGGCAAGCTACTaGTGGATGTTTACACTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TKSWSNSKSDCATRIITTLVASY*WMFTLS Trigger: TGAAAGTGTAAACATCCAGCAGTAGCTTGCCACGAG...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGTGTTCCCTGGGACTTTaGGTAGGGATAAGGTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKCSLGL*VGIRFN Trigger: ATTGAACCTTATCCCTACCCAAAGTCCCAGGGAACA...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGAAAATCCTTAGCTGGTaGATGTTCCCTGGGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKKILSW*MFPGTL Trigger: CAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKAGEAI*THSNFL Trigger: GAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGC...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAATAGCATCACCCTTTaGGGATCTCTCAGAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRNSITL*GSLRSI Trigger: GATGCTTCTGAGAGATCCCCAAAGGGTGATGCTATT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGTCTCTCAGAAGCATCTaGAAATTTTCCAGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRSLRSI*KFSSRR Trigger: CCTTCTGCTGGAAAATTTTCAGATGCTTCTGAGAGA...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR GCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAAAGGGACTGAAGCTTaGCTACTCTCACTTCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: YCWMFTLSFLLASPFMRRKGTEA*LLSLQI Trigger: AATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCCCCTAGGAAGGAACTaGAAAAGTCAAATTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: CWMFTLSFLLASPFMRRRPLGRN*KSQILN Trigger: ATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAAGTCCGTGTATCTCCTTTAAGGAACATCTTCACATCCACTTTTGATATAAGCAATGGGACATCCTaGCAGATGAATGAACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: QKVRVSPLRNIFTSTFDISNGTS*QMNEHL Trigger: CAAGTGTTCATTCATCTGCCAGGATGTCCCATTGCT...TATATCAAAAGTGGATGTGAAGATGTTCCTTAAAGGAGATACACGGACTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAAGTCCGTGTATCTCCTTTAAGGAACATCTTCACATCCACTTTTGATATATCTCTCAGAAGCATCTaGAAATTTTCCAGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QKVRVSPLRNIFTSTFDISLRSI*KFSSRR Trigger: CCTTCTGCTGGAAAATTTTCAGATGCTTCTGAGAGA...TATATCAAAAGTGGATGTGAAGATGTTCCTTAAAGGAGATACACGGACTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGATGCTTGTTTAGAAACTaGAGGATCACAGCACAACGG | + |
|
Preference number: 2 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRCLFRN*RITAQR Trigger: CCGTTGTGCTGTGATCCTTCAGTTTCTAAACAAGCA...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGAAAAATCCTTAGCTGGTaGATGTTCCCTGGGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRKILSW*MFPGTL Trigger: CAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGAGGACCTCCAGGGTTTaGTATTTCAAAAACAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YEGNSILLLLNHKPAYLMRTSRV*YFKNKD Trigger: ATCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCT...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGCCCCTAGGAAGGAACTaGAAAAGTCAAATTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLDVYTFISVGFSFYEKPLGRN*KSQILN Trigger: ATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR CAA 90 bp | ATTCTAATACCAGTGGAGAATAGCCAAGAATCATCTAGTGTCTATTaGAACAAGAAAACCAGGTGTCTAAATATGGAACTGGCTTATAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILIPVENSQESSSVY*NKKTRCLNMELAYS Trigger: ACTATAAGCCAGTTCCATATTTAGACACCTGGTTTTCTTGTTCAAATAGACACTAGATGATTCTTGGCTATTCTCCACTGGTATTAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACAGAGTGAGATGGGGGTaGTACATCACACCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSPREPVVGVVGQDSSKDRVRWG*YITPPP Trigger: AGGAGGAGGTGTGATGTACAACCCCCATCTCACTCT...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR TCA 72 bp | GTGCCCTCAAAGGGCATCAAGGGGTCATGGAGAGCTTaGCAGAGCCCTTTTATGACCAATCCCAGAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPSKGIKGSWRA*QSPFMTNPRVA Trigger: AGCCACTCTGGGATTGGTCATAAAAGGGCTCTGTCAAGCTCTCCATGACCCCTTGATGCCCTTTGAGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR GCA 72 bp | CCAGTACACCTGATCTCCCACCCCGCTGGAAAGCAATaGCTAAGGATTGGACTGCTGGAGAGGCAATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PVHLISHPAGKQ*LRIGLLERQYG Trigger: TCCATATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGGGTGGGAGATCAGGTGTACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | GAGTATGTAACCAGTACACCTGATCTCCCACCCCGCTaGAAAGCAATGCCTAAGGATTGGACTGCTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EYVTSTPDLPPR*KAMPKDWTAGE Trigger: CTCTCCAGCAGTCCAATCCTTAGGCATTGCTTTCCAGCGGGGTGGGAGATCAGGTGTACTGGTTACATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | AAAGCACCAACAAACACAGCCATGGCTAGAGTGAGATaGGGGTTGTACATCACACCTCCTCCTCGTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAPTNTAMARVR*GLYITPPPRGK Trigger: CTTGCCACGAGGAGGAGGTGTGATGTACAACCCCCATCTCACTCTAGCCATGGCTGTGTTTGTTGGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| 3UTR TCA 72 bp | CACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATaGCGTCTCCAATCGTGCTGTCTTTTCAAGTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: HIASVEGPSSQE*RLQSCCLFKLM Trigger: CATTAACTTGAAAAGACAGCACGATTGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | AACCATAAACCTGCTTATCTGATGATAAGATCCCAGTaGTGGGCAGTCCTGTGGCTTTTTGAGGGGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: NHKPAYLMIRSQ*WAVLWLFEGFP Trigger: GGGGAACCCCTCAAAAAGCCACAGGACTGCCCACCACTGGGATCTTATCATCAGATAAGCAGGTTTATGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR TCA 72 bp | TCAAGGGGTCATGGAGAGCTTGACAGAGCCCTTTTATaGCCAATCCCAGAGTGGCTTGCTGCATATAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SRGHGELDRALL*PIPEWLAAYRL Trigger: TAACCTATATGCAGCAAGCCACTCTGGGATTGGTCATAAAAGGGCTCTGTCAAGCTCTCCATGACCCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR GCA 72 bp | CTTCCATATTATTCAGACATCCAGACAATCACTTTCTaGCCCTCTCCACTTCCCAGACCCTTCACACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPYYSDIQTITF*PSPLPRPFTPE Trigger: CTCTGGTGTGAAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAATATGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | TCCCCAATAATAATAGTCAGTAGCACATTGCATCTGTaGAGGGTCCCAGCTCCCAGGAATGACGTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SPIIIVSSTLHL*RVPAPRNDVSN Trigger: ATTGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGACTATTATTATTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | CCATTCAAATTTCCTCCCAGAGACCAATCTAGGTTCTaGGGAAAATCCTTAGCTGGTGGATGTTCCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFKFPPRDQSRF*GKSLAGGCSLG Trigger: TCCCAGGGAACATCCACCAGCTAAGGATTTTCCCCAGAACCTAGATTGGTCTCTGGGAGGAAATTTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | AGTGAGATGGGGGTTGTACATCACACCTCCTCCTCGTaGCAAGCTACTGCTGGATGTTTACACTTTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SEMGVVHHTSSS*QATAGCLHFHF Trigger: GAAATGAAAGTGTAAACATCCAGCAGTAGCTTGCCACGAGGAGGAGGTGTGATGTACAACCCCCATCTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGAACCAAGAATGTGCATTaGGTAGAAGCCTATGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RIGLLERQYGPIQISSQRTKNVH*VEAYGS Trigger: GCTACCATAGGCTTCTACCAAATGCACATTCTTGGT...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR GCA 72 bp | AAGGGTGGTCACCAAAGCACAAAAGGGACTGAAGCTTaGCTACTCTCACTTCAGATTCTTGAACAGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KGGHQSTKGTEA*LLSLQILEQER Trigger: TCTCTCCTGTTCAAGAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | GGAAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTaGGTAGGGATAAGGTTCAATAGGGACCAAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: GKSLAGGCSLGL*VGIRFNRDQEC Trigger: ACATTCTTGGTCCCTATTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | GCAATGCCTAAGGATTGGACTGCTGGAGAGGCAATATaGACCCATTCAAATTTCCTCCCAGAGACCAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: AMPKDWTAGEAI*THSNFLPETNL Trigger: TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCTTAGGCATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | TGTACATCACACCTCCTCCTCGTGGCAAGCTACTGCTaGATGTTTACACTTTCATTTCTGTTGGCTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CTSHLLLVASYC*MFTLSFLLASP Trigger: AGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAGCTTGCCACGAGGAGGAGGTGTGATGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCATAGTCAGTAGCACATaGCATCTGTGGAGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLGRNWKSQILNGVLFGPIVSST*HLWRVP Trigger: TGGGACCCTCCACAGATGCAATGTGCTACTGACTAT...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACATAGTCAGTAGCACATaGCATCTGTGGAGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WMFTLSFLLASPFMRRRHIVSST*HLWRVP Trigger: TGGGACCCTCCACAGATGCAATGTGCTACTGACTAT...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCTTAATGGAGTATTATTaGGGCCCTCATTTCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FNEIELGEPSRLRCSSMSLMEYY*GPHFRK Trigger: CTTTCTGAAATGAGGGCCCAAATAATACTCCATTAA...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCAGGAGAGAAACCCCTTaGAGAGCCTGGAATGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: APQVPTTMFCEITNKIILRRETP*RAWNEN Trigger: GTTTTCATTCCAGGCTCTCAAAGGGGTTTCTCTCCT...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR TCA 72 bp | ATGGGTAGAGAATTATCTTTAGCTCTGAGTCTTGTATaGCTCTTCTTGTGCCCTCAAAGGGCATCAAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MGRELSLALSLV*LFLCPQRASRG Trigger: ACCCCTTGATGCCCTTTGAGGGCACAAGAAGAGTCATACAAGACTCAGAGCTAAAGATAATTCTCTACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGATAGTCAGTAGCACATaGCATCTGTGGAGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLDVYTFISVGFSFYEKIVSST*HLWRVP Trigger: TGGGACCCTCCACAGATGCAATGTGCTACTGACTAT...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCACCAAGAATGTGCATTaGGTAGAAGCCTATGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: CWMFTLSFLLASPFMRRRTKNVH*VEAYGS Trigger: GCTACCATAGGCTTCTACCAAATGCACATTCTTGGT...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR TCA 72 bp | GTGCTACAAAGACTCAGACTTTGCTTGTTTAGAAACTaGAGGATCACAGCACAACGGGTCAAGATGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLQRLRLCLFRN*RITAQRVKMED Trigger: ATCTTCCATCTTGACCCGTTGTGCTGTGATCCTTCAGTTTCTAAACAAGCAAAGTCTGAGTCTTTGTAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | GCATACCCTGGTAATGCAAGGCCCCTAGGAAGGAACTaGAAAAGTCAAATTCTTAATGGAGTATTATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AYPGNARPLGRN*KSQILNGVLFG Trigger: CCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGGCCTTGCATTACCAGGGTATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CCA 72 bp | CTGAAGGATCACAGCACAACGGGTCAAGATGGAAGATaGACCGGTACTTATTATGAATCAATTTATACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKDHSTTGQDGR*TGTYYESIYTL Trigger: CAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCGTTGTGCTGTGATCCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTAGGAGAGAAACCCCTTaGAGAGCCTGGAATGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TKSWSNSKSDCATRIITTRRETP*RAWNEN Trigger: GTTTTCATTCCAGGCTCTCAAAGGGGTTTCTCTCCT...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGACCAAGAATGTGCATTaGGTAGAAGCCTATGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: YEGNSILLLLNHKPAYLMTKNVH*VEAYGS Trigger: GCTACCATAGGCTTCTACCAAATGCACATTCTTGGT...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCAAGGACCTCCAGGGTTaGATATTTCAAAAACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: APQVPTTMFCEITNKIILKDLQG*IFQKQR Trigger: TCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCTT...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTAAGGACCTCCAGGGTTaGATATTTCAAAAACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCKDLQG*IFQKQR Trigger: TCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCTT...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGTTAATGGAGTATTATTaGGGCCCTCATTTCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YEGNSILLLLNHKPAYLMLMEYY*GPHFRK Trigger: CTTTCTGAAATGAGGGCCCAAATAATACTCCATTAA...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAAGGACCTCCAGGGTTaGATATTTCAAAAACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YCWMFTLSFLLASPFMRRKDLQG*IFQKQR Trigger: TCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCTT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGAAGGACCTCCAGGGTTaGATATTTCAAAAACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLDVYTFISVGFSFYEKKDLQG*IFQKQR Trigger: TCTTTGTTTTTGAAATATCAAACCCTGGAGGTCCTT...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTACACTTTCATTTCTGTaGGCTTCTCCTTTTATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TKSWSNSKSDCATRIITTTLSFL*ASPFMR Trigger: TCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGT...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTTCATCTAGTGTCTATTaGAACAAGAAAACCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TKSWSNSKSDCATRIITTSSSVY*NKKTRC Trigger: ACACCTGGTTTTCTTGTTCAAATAGACACTAGATGA...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR TCA 72 bp | AACGGGTCAAGATGGAAGATGGACCGGTACTTATTATaGATCAATTTATACCCTGTTATGCTTCTGATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NGSRWKMDRYLL*INLYPVMLLIK Trigger: CTTTATCAGAAGCATAACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR-3UTR CAA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGATCATCTAGTGTCTATTaGAACAAGAAAACCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRSSSVY*NKKTRC Trigger: ACACCTGGTTTTCTTGTTCAAATAGACACTAGATGA...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACTGCTGGCCTCCCCGTTaGGCTCACTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDCWPPR*AHWVSC Trigger: ACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCA...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACGCTAATTCGGATCCATaGGTCACAGTGCGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDANSDP*VTVREL Trigger: GAGTTCCCGCACTGTGACTCATGGATCCGAATTAGC...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCACCTGGAGTCCTTGGATaGGTCTCGATCTCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPPGVLG*VSISGG Trigger: GCCACCAGAGATCGAGACTCATCCAAGGACTCCAGG...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099673.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACAGCCATTCTGGAATCTaGGGTCTCCTCATAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDSHSGI*GLLIGP Trigger: TGGTCCTATGAGGAGACCTCAGATTCCAGAATGGCT...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCATGTGCCAGGCTCAACTaGAAGAGGCAAAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPCARLN*KRQSPQ Trigger: TTGGGGACTTTGCCTCTTGCAGTTGAGCCTGGCACA...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACCACATGGAATACACCTaGGTAGCGGCAGGTTACATT | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDHMEYT*VAAGYI Trigger: AATGTAACCTGCCGCTACGCAGGTGTATTCCATGTG...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACACTTCTGGGTTTGAATaGTTTGGCTTCCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDTSGFE*FGFHWV Trigger: GACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGT...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCTGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSCGNSP*SPWMSL Trigger: GAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCA...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CAA 72 bp | TGTGCCCTCAAAGGGCATCAAGGGGTCATGGAGAGCTaGACAGAGCCCTTTTATGACCAATCCCAGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CALKGHQGVMES*TEPFYDQSQSG Trigger: GCCACTCTGGGATTGGTCATAAAAGGGCTCTGTCAAGCTCTCCATGACCCCTTGATGCCCTTTGAGGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACCTGAGTTGTGGACTGTaGATTACCAAACCAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSPREPVVGVVGQDSSKDLSCGL*ITKPRP Trigger: TGGTCTTGGTTTGGTAATTCACAGTCCACAACTCAG...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR TCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCCTGGTCCGGGGTCTCTaGTGGTTCCTTGTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSLVRGL*WFLVHQ Trigger: TTGGTGAACAAGGAACCATCAGAGACCCCGGACCAG...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCACAGTGCCAGGAGAGATaGCAAGATGATGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPQCQER*QDDEPF Trigger: GAATGGCTCATCATCTTGGCATCTCTCCTGGCACTG...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCAGTCCAATTTTCTCCATaGGCACTGGTGCTGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPVQFSP*ALVLIL Trigger: CAGAATCAGCACCAGTGCTCATGGAGAAAATTGGAC...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCATCCCATTGCCACCGTTaGTCACCAGCTTTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPSHCHR*SPAFSS Trigger: AGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGA...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCTGTGCCAGGCTCAACTaGAAGAGGCAAAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSCARLN*KRQSPQ Trigger: TTGGGGACTTTGCCTCTTGCAGTTGAGCCTGGCACA...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACTGGTCCGGGGTCTCTaGTGGTTCCTTGTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIGLLERQYGPIQISSQRLVRGL*WFLVHQ Trigger: TTGGTGAACAAGGAACCATCAGAGACCCCGGACCAG...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTATGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAGEAIWTHSNFLPETNLCGNSP*SPWMSL Trigger: GAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCA...TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCACCACATTTCCTTCTATaGACCCATACCTGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPPHFLL*THTCMF Trigger: AAACATGCAGGTATGGGTTCATAGAAGGAAATGTGG...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCTGCTGGCCTCCCCGTTaGGCTCACTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILCWPPR*AHWVSC Trigger: ACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCA...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCATGTTATTCTTTGACTTaGATGGTTGTTGTGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPCYSLT*MVVVGR Trigger: TCGGCCCACAACAACCATCCAAGTCAAAGAATAACA...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCCACCAAATGGGTATTTaGAGCTGCAGTAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSHQMGI*SCSRLK Trigger: CTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTG...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCTGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKICGNSP*SPWMSL Trigger: GAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCA...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCGAGGGGCTGAGGCATTaGAGCAATATGTGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DWTAGEAIWTHSNFLPETEGLRH*SNMCHS Trigger: ACTATGACACATATTGCTTCAATGCCTCAGCCCCTC...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCATGTGTTGTTATTCTTTaGCTTGGATGGTTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPCVVIL*LGWLLW Trigger: CCACAACAACCATCCAAGTCAAAGAATAACAACACA...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCACAGGAAACATCCTCTTaGCTCTGTGTTGTTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVAHCICGGSQLPGMTSPQETSS*LCVVIL Trigger: AAGAATAACAACACAGAGTCAAGAGGATGTTTCCTG...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR TCA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACTGTGGAGTTGTCACTaGAAGTGGTCCTGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RIGLLERQYGPIQISSQRLWSCH*KWSCPV Trigger: AACAGGACAGGACCACTTTCAGTGACAACTCCACAG...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCAGCCATTCTGGAATCTaGGGTCTCCTCATAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFSHSGI*GLLIGP Trigger: TGGTCCTATGAGGAGACCTCAGATTCCAGAATGGCT...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTTGCTGGCCTCCCCGTTaGGCTCACTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCCWPPR*AHWVSC Trigger: ACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCA...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCAAATGCACCATTTCCTaGGACTTGCTGGCCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKIKCTIS*DLLASP Trigger: CGGGGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACAGTGCCAGGAGAGATaGCAAGATGATGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RIGLLERQYGPIQISSQRQCQER*QDDEPF Trigger: GAATGGCTCATCATCTTGGCATCTCTCCTGGCACTG...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTCAGTGCCAGGAGAGATaGCAAGATGATGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLQCQER*QDDEPF Trigger: GAATGGCTCATCATCTTGGCATCTCTCCTGGCACTG...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCCACCAAATGGGTATTTaGAGCTGCAGTAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DWTAGEAIWTHSNFLPETHQMGI*SCSRLK Trigger: CTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTG...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGATGATGAGCCATTCTaGAATCTGAGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSDDEPF*NLRSPH Trigger: ATGAGGAGACCTCAGATTCCAGAATGGCTCATCATC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCCCACATTTCCTTCTATaGACCCATACCTGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSPHFLL*THTCMF Trigger: AAACATGCAGGTATGGGTTCATAGAAGGAAATGTGG...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAACTGTGGAGTTGTCACTaGAAGTGGTCCTGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KILSWWMFPGTLGRDKVQLWSCH*KWSCPV Trigger: AACAGGACAGGACCACTTTCAGTGACAACTCCACAG...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCTCCCATTGCCACCGTTaGTCACCAGCTTTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFSHCHR*SPAFSS Trigger: AGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGA...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGTGCTGGCCTCCCCGTTaGGCTCACTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDVYTFISVGFSFYEKCWPPR*AHWVSC Trigger: ACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCA...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACAAATGCACCATTTCCTaGGACTTGCTGGCCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHKCTIS*DLLASP Trigger: CGGGGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCCTGGTCCGGGGTCTCTaGTGGTTCCTTGTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILLVRGL*WFLVHQ Trigger: TTGGTGAACAAGGAACCATCAGAGACCCCGGACCAG...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCCATGAAAACCAGTTCTaGGCTTCTTGCCTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFHENQF*ASCLLG Trigger: ACCCAAGAGGCAAGAAGCCCAGAACTGGTTTTCATG...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS-3UTR CCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCAACCACGTCTCCTGCTaGGTAGCTGCTGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILNHVSC*VAAASA Trigger: AGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTT...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCAACCACGTCTCCTGCTaGGTAGCTGCTGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CWMFTLSFLLASPFMRRRNHVSC*VAAASA Trigger: AGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTT...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACACCAAATGGGTATTTaGAGCTGCAGTAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RIGLLERQYGPIQISSQRHQMGI*SCSRLK Trigger: CTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTG...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCATAGAAGTTGTTGGATaGTTTTCGTCTTCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSIEVVG*FSSSSG Trigger: GCCGGAAGAAGACGAAAACCATCCAACAACTTCTAT...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
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| CDS-3UTR CCA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGCTCTTAGTGCTAGATaGCAGAATAGAAGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNEIELGEPSRLRCSSMSALSAR*QNRSCW Trigger: CCAACAACTTCTATTCTGCCATCTAGCACTAAGAGC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTATTCTTCAGGAGGGGCTaGGGCATTGAAGCAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: TAGEAIWTHSNFLPETNLFFRRG*GIEAIC Trigger: ACATATTGCTTCAATGCCTCAGCCCCTCCTGAAGAA...TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCGCTAATTCGGATCCATaGGTCACAGTGCGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILANSDP*VTVREL Trigger: GAGTTCCCGCACTGTGACTCATGGATCCGAATTAGC...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCGCTAATTCGGATCCATaGGTCACAGTGCGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPANSDP*VTVREL Trigger: GAGTTCCCGCACTGTGACTCATGGATCCGAATTAGC...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCTGTGCCAGGCTCAACTaGAAGAGGCAAAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPCARLN*KRQSPQ Trigger: TTGGGGACTTTGCCTCTTGCAGTTGAGCCTGGCACA...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCAGTGCCAGGAGAGATaGCAAGATGATGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKIQCQER*QDDEPF Trigger: GAATGGCTCATCATCTTGGCATCTCTCCTGGCACTG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAAAAGAATCAGAGCCAGTaGCAGGAGAGATGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KILSWWMFPGTLGRDKVQKNQSQ*QERCQD Trigger: ATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTT...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTCACTGGGTCCAGTCCTaGTTGTCTTCTGTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSWSNSKSDCATRIITTHWVQS*LSSVRA Trigger: TGCCCGCACAGAAGACAACCAGGACTGGACCCAGTG...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGTGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YEGNSILLLLNHKPAYLMCGNSP*SPWMSL Trigger: GAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCA...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCTCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPSAVIH*SGVSDG Trigger: ACCATCAGAGACCCCGGACCAGTGTATGACAGCTGA...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| 3UTR CAA 72 bp | AAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCTaGAACAGGAGAGAAACCCCTTTGAGAGCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLKLAYSHFRF*NRRETPLRAWN Trigger: ATTCCAGGCTCTCAAAGGGGTTTCTCTCCTGTTCAAGAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCCCACATTTCCTTCTATaGACCCATACCTGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFPHFLL*THTCMF Trigger: AAACATGCAGGTATGGGTTCATAGAAGGAAATGTGG...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTGCTAATTCGGATCCATaGGTCACAGTGCGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCANSDP*VTVREL Trigger: GAGTTCCCGCACTGTGACTCATGGATCCGAATTAGC...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACAGCCATTCTGGAATCTaGGGTCTCCTCATAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHSHSGI*GLLIGP Trigger: TGGTCCTATGAGGAGACCTCAGATTCCAGAATGGCT...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCAGCCATTCTGGAATCTaGGGTCTCCTCATAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPSHSGI*GLLIGP Trigger: TGGTCCTATGAGGAGACCTCAGATTCCAGAATGGCT...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCTCCCATTGCCACCGTTaGTCACCAGCTTTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKISHCHR*SPAFSS Trigger: AGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGA...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGAAATGCACCATTTCCTaGGACTTGCTGGCCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLDVYTFISVGFSFYEKKCTIS*DLLASP Trigger: CGGGGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCATGTTTCAAAACCCTTaGTCAGGGCCAACTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DWTAGEAIWTHSNFLPETMFQNP*SGPTSF Trigger: AAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACAT...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAACCACGTCTCCTGCTaGGTAGCTGCTGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCWMFTLSFLLASPFMRRNHVSC*VAAASA Trigger: AGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCGTCCCTTCTGTCACATaGGAGTCTTCACTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILVPSVT*ESSLGV Trigger: TACCCCAAGTGAAGACTCCCATGTGACAGAAGGGAC...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCGGGTTGTACTATGACTaGAGTCTGTATCCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFGLYYD*SLYPCF Trigger: AAAGCAAGGATACAGACTCCAGTCATAGTACAACCC...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCAAGTCTTCCACCAAATaGGTATTTGGAGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFKSSTK*VFGAAV Trigger: TACTGCAGCTCCAAATACCCATTTGGTGGAAGACTT...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCTTCTTCAGGAGGGGCTaGGGCATTGAAGCAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILFFRRG*GIEAIC Trigger: ACATATTGCTTCAATGCCTCAGCCCCTCCTGAAGAA...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCGCATGGCTTTTTGAGTaGACAGTTGAGGCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWMFTLSFLLASPFMRRRAWLFE*TVEAMV Trigger: CACCATTGCCTCAACTGTGCACTCAAAAAGCCATGC...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR GCA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGATGGAGTCTGTATCCTTaGTTTCTGTTTGATGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIGLLERQYGPIQISSQRWSLYP*FLFDDL Trigger: AAGGTCATCAAACAGAAAGCAAGGATACAGACTCCA...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGGAAAGCCTCCAGGATATATGAGAAATTTATAGTTGATGGCAAAAGAGGGCTTCTTGCCTCTTaGGTGGTGTTTCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRKASRIYEKFIVDGKRGLLAS*VVFQGW Trigger: CCACCCCTGAAACACCACCCAAGAGGCAAGAAGCCC...TCTTTTGCCATCAACTATAAATTTCTCATATATCCTGGAGGCTTTCCTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAATGTTATTCTTTGACTTaGATGGTTGTTGTGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KILSWWMFPGTLGRDKVQCYSLT*MVVVGR Trigger: TCGGCCCACAACAACCATCCAAGTCAAAGAATAACA...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTAAAGTCTTCCACCAAATaGGTATTTGGAGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TAGEAIWTHSNFLPETNLKSSTK*VFGAAV Trigger: TACTGCAGCTCCAAATACCCATTTGGTGGAAGACTT...TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGTCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDVYTFISVGFSFYEKSAVIH*SGVSDG Trigger: ACCATCAGAGACCCCGGACCAGTGTATGACAGCTGA...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTTCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKSWSNSKSDCATRIITTSAVIH*SGVSDG Trigger: ACCATCAGAGACCCCGGACCAGTGTATGACAGCTGA...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCCACATTTCCTTCTATaGACCCATACCTGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKIPHFLL*THTCMF Trigger: AAACATGCAGGTATGGGTTCATAGAAGGAAATGTGG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTTTCTTCAGGAGGGGCTaGGGCATTGAAGCAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCFFRRG*GIEAIC Trigger: ACATATTGCTTCAATGCCTCAGCCCCTCCTGAAGAA...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGCTGTGGAGTTGTCACTaGAAGTGGTCCTGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDVYTFISVGFSFYEKLWSCH*KWSCPV Trigger: AACAGGACAGGACCACTTTCAGTGACAACTCCACAG...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTAATGTTTCAAAACCCTTaGTCAGGGCCAACTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TAGEAIWTHSNFLPETNLMFQNP*SGPTSF Trigger: AAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACAT...TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTAAGAATCAGAGCCAGTaGCAGGAGAGATGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCKNQSQ*QERCQD Trigger: ATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTT...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACTATCAGCCATCCTGGTaGTTGTCTGGAGTAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHYQPSW*LSGVVL Trigger: AAGTACTACTCCAGACAACCACCAGGATGGCTGATA...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTGTCCCTTCTGTCACATaGGAGTCTTCACTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKSWSNSKSDCATRIITTVPSVT*ESSLGV Trigger: TACCCCAAGTGAAGACTCCCATGTGACAGAAGGGAC...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACGATGATGAGCCATTCTaGAATCTGAGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHDDEPF*NLRSPH Trigger: ATGAGGAGACCTCAGATTCCAGAATGGCTCATCATC...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGTTCTTCAGGAGGGGCTaGGGCATTGAAGCAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: YCWMFTLSFLLASPFMRRFFRRG*GIEAIC Trigger: ACATATTGCTTCAATGCCTCAGCCCCTCCTGAAGAA...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCAATCTACAATTATTTTGTTTCTaGGCTGCTGCATGGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAGEAIWTHSNFLPETNLQLFCF*AAAWLF Trigger: AAAAAGCCATGCAGCAGCTCAGAAACAAAATAATTG...TAGATTGGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCAGGAAACATCCTCTTaGCTCTGTGTTGTTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKIQETSS*LCVVIL Trigger: AAGAATAACAACACAGAGTCAAGAGGATGTTTCCTG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR GCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGATGTGCCAGGCTCAACTaGAAGAGGCAAAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRCARLN*KRQSPQ Trigger: TTGGGGACTTTGCCTCTTGCAGTTGAGCCTGGCACA...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTCCGTGTATCTCCTTTAAGGAACATCTTCACATCCACTTTTGATATACAGTTCTGGGCTTCTTaGCTCTTGGGTGGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKVRVSPLRNIFTSTFDIQFWAS*LLGGVS Trigger: TGAAACACCACCCAAGAGGCAAGAAGCCCAGAACTG...TATATCAAAAGTGGATGTGAAGATGTTCCTTAAAGGAGATACACGGACTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR GCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAAGAATCAGAGCCAGTaGCAGGAGAGATGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YCWMFTLSFLLASPFMRRKNQSQ*QERCQD Trigger: ATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGATGGTTTGGCTTCCACTaGGTCCAGTCCTGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRWFGFH*VQSWLS Trigger: AGACAACCAGGACTGGACCCAGTGGAAGCCAAACCA...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTCTATATCAGCCATCCTaGTGGTTGTCTGGAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCLYQPS*WLSGVV Trigger: TACTACTCCAGACAACCACCAGGATGGCTGATATAG...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCGGGTTGTACTATGACTaGAGTCTGTATCCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILGLYYD*SLYPCF Trigger: AAAGCAAGGATACAGACTCCAGTCATAGTACAACCC...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCATAGAAGTTGTTGGATaGTTTTCGTCTTCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILIEVVG*FSSSSG Trigger: GCCGGAAGAAGACGAAAACCATCCAACAACTTCTAT...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAACAGAATAGAAGTTGTTaGATGGTTTTCGTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KILSWWMFPGTLGRDKVQQNRSC*MVFVFF Trigger: GAAGAAGACGAAAACCATCCAACAACTTCTATTCTG...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGGAAAGCCTCCAGGATATATGAGAAATTTATAGTTGATGGCAAAAGATCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRKASRIYEKFIVDGKRSAVIH*SGVSDG Trigger: ACCATCAGAGACCCCGGACCAGTGTATGACAGCTGA...TCTTTTGCCATCAACTATAAATTTCTCATATATCCTGGAGGCTTTCCTTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EKAPQVPTTMFCEITNKIVIYNV*SIDVFL Trigger: CAAGAAGACATCGATGCTTCAAACATTATAGATGAC...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACTTGGACTCTGATGGTTaGAATAACCATGAAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHLDSDG*NNHENQ Trigger: CTGGTTTTCATGGTTATTTCAACCATCAGAGTCCAA...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR GCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACATGTTTCAAAACCCTTaGTCAGGGCCAACTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHMFQNP*SGPTSF Trigger: AAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACAT...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACCTTCATCATCATCAATaGCTGATCCAGAAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHLHHHQ*LIQKNW Trigger: CCAGTTTTTCTGGATCAGGCATTGATGATGATGAAG...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR GCA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACTGGAGTCTGTATCCTTaGTTTCTGTTTGATGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WMFTLSFLLASPFMRRRHWSLYP*FLFDDL Trigger: AAGGTCATCAAACAGAAAGCAAGGATACAGACTCCA...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGCCTGAGTCTGAGTTGTaGACTGTGAATTACCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: YEGNSILLLLNHKPAYLMPESEL*TVNYQT Trigger: GGTTTGGTAATTCACAGTCCACAACTCAGACTCAGG...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGAGTCCCTTCTGTCACATaGGAGTCTTCACTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRVPSVT*ESSLGV Trigger: TACCCCAAGTGAAGACTCCCATGTGACAGAAGGGAC...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTGATGATGAGCCATTCTaGAATCTGAGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSWSNSKSDCATRIITTDDEPF*NLRSPH Trigger: ATGAGGAGACCTCAGATTCCAGAATGGCTCATCATC...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPVIYNV*SIDVFL Trigger: CAAGAAGACATCGATGCTTCAAACATTATAGATGAC...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APQVPTTMFCEITNKIILVIYNV*SIDVFL Trigger: CAAGAAGACATCGATGCTTCAAACATTATAGATGAC...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGAAAGAATCAGAGCCAGTaGCAGGAGAGATGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRKNQSQ*QERCQD Trigger: ATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTT...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGAAGTCTTCCACCAAATaGGTATTTGGAGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YCWMFTLSFLLASPFMRRKSSTK*VFGAAV Trigger: TACTGCAGCTCCAAATACCCATTTGGTGGAAGACTT...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCCAGAATAGAAGTTGTTaGATGGTTTTCGTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGRNWKSQILNGVLFGPQNRSC*MVFVFF Trigger: GAAGAAGACGAAAACCATCCAACAACTTCTATTCTG...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCTCTTAGTGCTAGATaGCAGAATAGAAGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLDVYTFISVGFSFYEKALSAR*QNRSCW Trigger: CCAACAACTTCTATTCTGCCATCTAGCACTAAGAGC...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGTGTGTTGTTATTCTTTaGCTTGGATGGTTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YEGNSILLLLNHKPAYLMCVVIL*LGWLLW Trigger: CCACAACAACCATCCAAGTCAAAGAATAACAACACA...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGGAAAGCCTCCAGGATATATGAGAAATTTATAGTTGATGGCAAAAGAGATGATGAGCCATTCTaGAATCTGAGGTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRRKASRIYEKFIVDGKRDDEPF*NLRSPH Trigger: ATGAGGAGACCTCAGATTCCAGAATGGCTCATCATC...TCTTTTGCCATCAACTATAAATTTCTCATATATCCTGGAGGCTTTCCTTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| 3UTR CAA 72 bp | CCAGTGGAGAATAGCCAAGAATCATCTAGTGTCTATTaGAACAAGAAAACCAGGTGTCTAAATATGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVENSQESSSVY*NKKTRCLNMEL Trigger: CAGTTCCATATTTAGACACCTGGTTTTCTTGTTCAAATAGACACTAGATGATTCTTGGCTATTCTCCACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGGGTAACAGCATTCTCCTTTTGCTAAACCATAAACCTGCTTATCTGATGGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YEGNSILLLLNHKPAYLMVIYNV*SIDVFL Trigger: CAAGAAGACATCGATGCTTCAAACATTATAGATGAC...CATCAGATAAGCAGGTTTATGGTTTAGCAAAAGGAGAATGCTGTTACCCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGAATAGAAGTTGTTGGATaGTTTTCGTCTTCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRIEVVG*FSSSSG Trigger: GCCGGAAGAAGACGAAAACCATCCAACAACTTCTAT...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGAGCTCTTAGTGCTAGATaGCAGAATAGAAGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRALSAR*QNRSCW Trigger: CCAACAACTTCTATTCTGCCATCTAGCACTAAGAGC...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAGGAAAGCCTCCAGGATATATGAGAAATTTATAGTTGATGGCAAAAGAATGTTTCAAAACCCTTaGTCAGGGCCAACTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KRRKASRIYEKFIVDGKRMFQNP*SGPTSF Trigger: AAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACAT...TCTTTTGCCATCAACTATAAATTTCTCATATATCCTGGAGGCTTTCCTTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCATGGAGTAACTCAAAGTCAGATTGTGCTACCAGAATCATCACCACTTATGAAGATGACTCTTaGACTCTGATGGTTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TKSWSNSKSDCATRIITTYEDDS*TLMVEI Trigger: TATTTCAACCATCAGAGTCCAAGAGTCATCTTCATA...AGTGGTGATGATTCTGGTAGCACAATCTGACTTTGAGTTACTCCATGATTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS GCA 90 bp | CCCCTGCCATCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTGCTaGTTCTGCTGTACTATTAGGAGTGGTGGCCAAGGTGCTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLPSVLKPRLLLGSC*FCCTIRSGGQGAPD Trigger: ATCCGGAGCACCTTGGCCACCACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060516.14 |
||
| CDS CCA 90 bp | CCACTGGGTCCAGTCCTGGTTGTCTTCTGTGCGGGCAGAAACCCGTaGAGTACTTGCAATGGTGGCCAAGGTGCTCCGGATAAAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLGPVLVVFCAGRNP*STCNGGQGAPDKEG Trigger: TCCTTCTTTATCCGGAGCACCTTGGCCACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
||
| CDS TCA 90 bp | TGTTCACCAAATGCACCATTTCCTGAGACTTGCTGGCCTCCCCGTTaGGCTCACTGGGTTTCCTGTCTTCCACCGTCCCATTGCCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: CSPNAPFPETCWPPR*AHWVSCLPPSHCHR Trigger: ACGGTGGCAATGGGACGGTGGAAGACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | GGTTCGCACTTGAGTGTCCAGCTAATTCGGATCCATGAGTCACAGTaGGGGAACTCCCCCTGGAGTCCTTGGATGAGTCTCGATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSHLSVQLIRIHESQ*GNSPWSPWMSLDLL Trigger: CAGGAGATCGAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCACTGTGACTCATGGATCCGAATTAGCTGGACACTCAAGTGCGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | CCAGTCCTGGTTGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTTaGAATGGTGGCCAAGGTGCTCCGGATAAAGAAGGAGTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLVVFCAGRNPWST*NGGQGAPDKEGVIL Trigger: CAGGATGACTCCTTCTTTATCCGGAGCACCTTGGCCACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | TTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTGTaGGGGCAGAAACCCGTGGAGTACTTGCAATGGTGGCCAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LNGLASTGSSPGCLL*GQKPVEYLQWWPRC Trigger: GCACCTTGGCCACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACCTGCTGCATGGCTTTTaGAGTGCACAGTTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KSPREPVVGVVGQDSSKDLLHGF*SAQLRQ Trigger: TTGCCTCAACTGTGCACTCAAAAAGCCATGCAGCAG...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCCCAGGGAGCCTGTTGTGGGTGTGGTAGGCCAGGATAGCTCTAAGGACTGGAGTCTGTATCAGTaGTCCCTTCTGTCACATGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPREPVVGVVGQDSSKDWSLYQ*SLLSHG Trigger: CCCATGTGACAGAAGGGACAACTGATACAGACTCCA...GTCCTTAGAGCTATCCTGGCCTACCACACCCACAACAGGCTCCCTGGGGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111194.8 |
||
| CDS TCA 90 bp | TCCGGGGTCTCTGATGGTTCCTTGTTCACCAAATGCACCATTTCCTaGGACTTGCTGGCCTCCCCGTTGAGCTCACTGGGTTTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGVSDGSLFTKCTIS*DLLASPLSSLGFLS Trigger: AGACAGGAAACCCAGTGAGCTCAACGGGGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAACCATCAGAGACCCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | CCCCTGCCATCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTGCTaGTTCTGCTGTACTATTAGGAGTTGTGCTTGTAGCATGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPSVLKPRLLLGSC*FCCTIRSCACSMWG Trigger: ACCCCACATGCTACAAGCACAACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | GACCGCGATGCAGACGGCAAGAATCAGAGCCAGTGCCAGGAGAGATaGCAAGATGATGAGCCATTCTGGAATCTGAGGTCTCCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRDADGKNQSQCQER*QDDEPFWNLRSPHR Trigger: CCTATGAGGAGACCTCAGATTCCAGAATGGCTCATCATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTTGCCGTCTGCATCGCGGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | TCTTCCACCGTCCCATTGCCACCGTTGATCACCAGCTTTTTCTTCTaGCCACACCTTCTCCTACTATTGACCGCGATGCAGACGGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTVPLPPLITSFFF*PHLLLLLTAMQTAR Trigger: TCTTGCCGTCTGCATCGCGGTCAATAGTAGGAGAAGGTGTGGGCAGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGACGGTGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | CCATCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTGCTGCTTCTaGTGTACTATTAGGAGTGGTGGCCAAGGTGCTCCGGATAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSVLKPRLLLGSCCF*CTIRSGGQGAPDKE Trigger: TTCTTTATCCGGAGCACCTTGGCCACCACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060516.14 |
||
| CDS CCA 90 bp | GTTGTCTGGAGTAGTACTTCTGGGTTTGAATGGTTTGGCTTCCACTaGGTCCAGTCCTGGTTGTCTTCTGTGCGGGCAGAAACCCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVWSSTSGFEWFGFH*VQSWLSSVRAETRG Trigger: TCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS CCA 90 bp | TCAGCCATCCTGGTGGTTGTCTGGAGTAGTACTTCTGGGTTTGAATaGTTTGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAILVVVWSSTSGFE*FGFHWVQSWLSSVR Trigger: CCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCACCAGGATGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS TCA 90 bp | CAGATTCCGGGTCTCGTCAGCTGTCATACACTGGTCCGGGGTCTCTaGTGGTTCCTTGTTCACCAAATGCACCATTTCCTGAGACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QIPGLVSCHTLVRGL*WFLVHQMHHFLRLA Trigger: AGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAACCATCAGAGACCCCGGACCAGTGTATGACAGCTGACGAGACCCGGAATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS GCA 90 bp | TCTCCTACTATTGACCGCGATGCAGACGGCAAGAATCAGAGCCAGTaGCAGGAGAGATGCCAAGATGATGAGCCATTCTGGAATCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTIDRDADGKNQSQ*QERCQDDEPFWNLR Trigger: CCTCAGATTCCAGAATGGCTCATCATCTTGGCATCTCTCCTGGCACTGGCTCTGATTCTTGCCGTCTGCATCGCGGTCAATAGTAGGAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS CCA 90 bp | TACACCTGCGTAGCGGCAGGTTACATTCAAATCGATCTGCTGATGTaGATGTGCCAGGCTCAACTGCAAGAGGCAAAGTCCCCAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YTCVAAGYIQIDLLM*MCQAQLQEAKSPSC Trigger: ACAGCTTGGGGACTTTGCCTCTTGCAGTTGAGCCTGGCACATCCACATCAGCAGATCGATTTGAATGTAACCTGCCGCTACGCAGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS CCA 90 bp | AGTAGGCTGTTCAGTAGGAAGGTAGGTGTGCAAAATGTAGCTTTCTaGGGTGCTCTTCTCGATGGTGGAGCCGCTGCTGACATCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRLFSRKVGVQNVAF*GALLDGGAAADIVI Trigger: GATGACGATGTCAGCAGCGGCTCCACCATCGAGAAGAGCACCCCAGAAAGCTACATTTTGCACACCTACCTTCCTACTGAACAGCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS CCA 90 bp | AGTACTTCTGGGTTTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTaGTTGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: STSGFEWFGFHWVQS*LSSVRAETRGVLAM Trigger: CATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS CCA 90 bp | ATGTCCACACTCTGCAGATTCCGGGTCTCGTCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGTTCCTTGTTCACCAAATGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: MSTLCRFRVSSAVIH*SGVSDGSLFTKCTI Trigger: AATGGTGCATTTGGTGAACAAGGAACCATCAGAGACCCCGGACCAGTGTATGACAGCTGACGAGACCCGGAATCTGCAGAGTGTGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGTGGGTAAGGTACTGTaGAAAGCCTGGCAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSVGKVL*KAWQRS Trigger: TGACCTCTGCCAGGCTTTCAACAGTACCTTACCCAC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCAGCTCCTGAGTCTGAGTaGTGGACTGTGAATTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVAHCICGGSQLPGMTSPAPESE*WTVNYQ Trigger: TTGGTAATTCACAGTCCACAACTCAGACTCAGGAGC...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCTTGGCTCCCAGCCTGTaGGGTTGGTATTTGACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETLAPSL*GWYLTP Trigger: CGGAGTCAAATACCAACCCAACAGGCTGGGAGCCAA...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS TCA 90 bp | GAGGCTGTGGTTCCGGGGTCCAATTTTCTCCATGAGCACTGGTGCTaGTTCTGTCTATATCAGCCATCCTGGTGGTTGTCTGGAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EAVVPGSNFLHEHWC*FCLYQPSWWLSGVV Trigger: TACTACTCCAGACAACCACCAGGATGGCTGATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCACAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCGTGGGTAAGGTACTGTaGAAAGCCTGGCAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETVGKVL*KAWQRS Trigger: TGACCTCTGCCAGGCTTTCAACAGTACCTTACCCAC...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCTTTTTGAGTGCACAGTaGAGGCAATGGTGGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSFLSAQ*RQWWPR Trigger: CCTTGGCCACCATTGCCTCAACTGTGCACTCAAAAA...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTCCAGTTCTGGGCTTCTaGCCTCTTGGGTGGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLPVLGF*PLGWCF Trigger: GAAACACCACCCAAGAGGCAAGAAGCCCAGAACTGG...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGATGACCTTGTCCCATaGGATGTGAGATTGGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSDDLVP*DVRLGR Trigger: TCGACCCAATCTCACATCCAATGGGACAAGGTCATC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGCACATTGCATCTGTGGAGGGTCCCAGCTCCCAGGAATGACGTCTCCAATCCTTGCTTTCTGTTaGATGACCTTGTCCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVAHCICGGSQLPGMTSPILAFC*MTLSHW Trigger: CCAATGGGACAAGGTCATCAAACAGAAAGCAAGGAT...TGGAGACGTCATTCCTGGGAGCTGGGACCCTCCACAGATGCAATGTGCTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGTCCCATTGCCACCGTaGATCACCAGCTTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSVPLPP*ITSFFF Trigger: GAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGAC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS GCA 90 bp | CCGGGAGATACTGTAGCGGCCATTTTTCTCCACATGGAATACACCTaGGTAGCGGCAGGTTACATTCAAATCGATCTGCTGATGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGDTVAAIFLHMEYT*VAAGYIQIDLLMWM Trigger: CATCCACATCAGCAGATCGATTTGAATGTAACCTGCCGCTACGCAGGTGTATTCCATGTGGAGAAAAATGGCCGCTACAGTATCTCCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 90 bp | GGAGGTGTTGGACGTGACGAGGATATATACTCCTGTGTGGTTGGCTaGACAGATAGCGTTGGGATGAATCCTCGGAATTACCACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGVGRDEDIYSCVVG*TDSVGMNPRNYHIS Trigger: GGAAATGTGGTAATTCCGAGGATTCATCCCAACGCTATCTGTGCAGCCAACCACACAGGAGTATATATCCTCGTCACGTCCAACACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCGGTCCATCGAAGGAATaGGGTAGGTCTGTGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETGPSKE*GRSVTD Trigger: ATCAGTCACAGACCTACCCAATTCCTTCGATGGACC...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCGTCCCATTGCCACCGTaGATCACCAGCTTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETVPLPP*ITSFFF Trigger: GAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGAC...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS TCA 90 bp | TGGTTATTGAAAGGAGGCTGTGGTTCCGGGGTCCAATTTTCTCCATaGGCACTGGTGCTGATTCTGTCTATATCAGCCATCCTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLLKGGCGSGVQFSP*ALVLILSISAILVV Trigger: AACCACCAGGATGGCTGATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCACAGCCTCCTTTCAATAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCCCATCAACATTAACGTaGGAGTCAGTAGCAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSPSTLT*ESVARV Trigger: GACTCTTGCTACTGACTCCAACGTTAATGTTGATGG...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTGTCCCATTGCCACCGTaGATCACCAGCTTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLVPLPP*ITSFFF Trigger: GAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGAC...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTGAGCTGGGTGAACCCAGCAGGCTCAGATGCTCTAGCATGAGCGTCTCTGATGGTTCCTaGTTCACCAAATGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: FNEIELGEPSRLRCSSMSVSDGS*FTKCTI Trigger: AATGGTGCATTTGGTGAACAAGGAACCATCAGAGAC...GCTCATGCTAGAGCATCTGAGCCTGCTGGGTTCACCCAGCTCAATCTCATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS GCA 90 bp | TGGTCCTGTCCTGTTCAAGTCTTCCACCAAATGGGTATTTGGAGCTaGAGTAGGCTGAAGGGTTGTACTATGACTGGAGTCTGTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSCPVQVFHQMGIWS*SRLKGCTMTGVCIL Trigger: AAGGATACAGACTCCAGTCATAGTACAACCCTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTGGAAGACTTGAACAGGACAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS GCA 90 bp | TGGTCCTGTCCTGTTCAAGTCTTCCACCAAATGGGTATTTGGAGCTaGAGTAGGCTGAAGGGTTGTACTATGACTGGAGTCTGTATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WSCPVQVFHQMGIWS*SRLKGCTMTGVCIS Trigger: ACTGATACAGACTCCAGTCATAGTACAACCCTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTGGAAGACTTGAACAGGACAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111194.8 |
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| CDS GCA 90 bp | TGGTCCTGTCCTGTTCAAGTCTTCCACCAAATGGGTATTTGGAGCTaGAGTAGGCTGAAGGGTTGTACTATGACTGGAGTCTGTATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WSCPVQVFHQMGIWS*SRLKGCTMTGVCIG Trigger: ACCAATACAGACTCCAGTCATAGTACAACCCTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTGGAAGACTTGAACAGGACAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111191.9 |
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| CDS CCA 90 bp | ACTTCCACCTCTTCTTGCATCTTTAGCGCCGCTCTTAGTGCTAGATaGCAGAATAGAAGTTGTTGGATGGTTTTCGTCTTCTTCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSTSSCIFSAALSAR*QNRSCWMVFVFFRL Trigger: GAGCCGGAAGAAGACGAAAACCATCCAACAACTTCTATTCTGCCATCTAGCACTAAGAGCGGCGCTAAAGATGCAAGAAGAGGTGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCTCCCAGCCTGTTGGGTaGGTATTTGACTCCGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: EKAPQVPTTMFCEITNKISQPVG*VFDSVP Trigger: TGGTACGGAGTCAAATACCAACCCAACAGGCTGGGA...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCGTAGTACTTCTGGGTTaGAATGGTTTGGCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETVVLLG*NGLAST Trigger: AGTGGAAGCCAAACCATTCAAACCCAGAAGTACTAC...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGACCATCCTTGCTTTCTGTTaGATGACCTTGTCCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: DWTAGEAIWTHSNFLPETILAFC*MTLSHW Trigger: CCAATGGGACAAGGTCATCAAACAGAAAGCAAGGAT...GGTCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
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| CDS TCA 90 bp | CTTCTCGATGGTGGAGCCGCTGCTGACATCGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTGGTGTGTTCTATACTCGCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLDGGAAADIVIYNV*SIDVFLVCSILALL Trigger: AAGAAGGGCGAGTATAGAACACACCAAGAAGACATCGATGCTTCAAACATTATAGATGACGATGTCAGCAGCGGCTCCACCATCGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 90 bp | AGCTGCTGCTTCTGCTGTACTATTAGGAGTTGTGCTTGTAGCATGTaGGGTCTCCTCTTCATCCTGATACTCATGGTTATTGAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCFCCTIRSCACSM*GLLFILILMVIERR Trigger: CCTCCTTTCAATAACCATGAGTATCAGGATGAAGAGGAGACCCCACATGCTACAAGCACAACTCCTAATAGTACAGCAGAAGCAGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 90 bp | TGTCCAGGAAACATCCTCTTGACTCTGTGTTGTTATTCTTTGACTTaGATGGTTGTTGTGGGCCGAAGCAGTTGTCCCTTCTGTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: CPGNILLTLCCYSLT*MVVVGRSSCPFCHM Trigger: CATGTGACAGAAGGGACAACTGCTTCGGCCCACAACAACCATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGGATGTTTCCTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCGTGGGTAAGGTACTGTaGAAAGCCTGGCAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CWMFTLSFLLASPFMRRRVGKVL*KAWQRS Trigger: TGACCTCTGCCAGGCTTTCAACAGTACCTTACCCAC...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| CDS-3UTR CAA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCGTGGGTAAGGTACTGTaGAAAGCCTGGCAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGRNWKSQILNGVLFGPVGKVL*KAWQRS Trigger: TGACCTCTGCCAGGCTTTCAACAGTACCTTACCCAC...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| CDS-3UTR CAA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCCTGGGTTTGAATGGTTaGGCTTCCACTGGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGRNWKSQILNGVLFGPLGLNG*ASTGSS Trigger: ACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAG...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS-3UTR CAA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCAGCCATCCTGGTGGTaGTCTGGAGTAGTACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CWMFTLSFLLASPFMRRRQPSWW*SGVVLL Trigger: CAGAAGTACTACTCCAGACAACCACCAGGATGGCTG...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS-3UTR CAA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGAGAGTCCCATTTTCCATaGTGTCTGGGTATTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RIGLLERQYGPIQISSQRESHFP*CLGIER Trigger: CCTTTCAATACCCAGACACAATGGAAAATGGGACTC...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
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| CDS-3UTR CAA 90 bp | GTGGTCACCAAAGCACAAAAGGGACTGAAGCTTGCCTACTCTCACTTCAGATTCCCATCAACATTAACGTaGGAGTCAGTAGCAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVTKAQKGLKLAYSHFRFPSTLT*ESVARV Trigger: GACTCTTGCTACTGACTCCAACGTTAATGTTGATGG...GAATCTGAAGTGAGAGTAGGCAAGCTTCAGTCCCTTTTGTGCTTTGGTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
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| CDS-3UTR CAA 90 bp | AGGATTGGACTGCTGGAGAGGCAATATGGACCCATTCAAATTTCCTCCCAGAGAGTCTCTGATGGTTCCTaGTTCACCAAATGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: RIGLLERQYGPIQISSQRVSDGS*FTKCTI Trigger: AATGGTGCATTTGGTGAACAAGGAACCATCAGAGAC...TCTCTGGGAGGAAATTTGAATGGGTCCATATTGCCTCTCCAGCAGTCCAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
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| CDS TCA 90 bp | AGGATATATACTCCTGTGTGGTTGGCTGCACAGATAGCGTTGGGATaGATCCTCGGAATTACCACATTTCCTTCTATGAACCCATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RIYTPVWLAAQIALG*ILGITTFPSMNPYL Trigger: CAGGTATGGGTTCATAGAAGGAAATGTGGTAATTCCGAGGATTCATCCCAACGCTATCTGTGCAGCCAACCACACAGGAGTATATATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 90 bp | TTAGCGCCGCTCTTAGTGCTAGATGGCAGAATAGAAGTTGTTGGATaGTTTTCGTCTTCTTCCGGCTCTCCATGTAATGTAGAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAPLLVLDGRIEVVG*FSSSSGSPCNVEKF Trigger: GAACTTCTCTACATTACATGGAGAGCCGGAAGAAGACGAAAACCATCCAACAACTTCTATTCTGCCATCTAGCACTAAGAGCGGCGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS-3UTR CAA 90 bp | TTATTCAGACATCCAGACAATCACTTTCTGCCCCTCTCCACTTCCCAGACCCTTTACCAGGCATCTTCGTaGTTGTATGAAGATGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFRHPDNHFLPLSTSQTLYQASS*LYEDDS Trigger: AGAGTCATCTTCATACAACAACGAAGATGCCTGGTA...AAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTGATTGTCTGGATGTCTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS-3UTR CAA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAATTGTTATTCTTTGACTaGGATGGTTGTTGTGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KILSWWMFPGTLGRDKVQLLFFD*DGCCGP Trigger: CGGCCCACAACAACCATCCAAGTCAAAGAATAACAA...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCCATTGGATGTGAGATaGGGTCGAAGAAATCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKAPQVPTTMFCEITNKIPLDVR*GRRNLS Trigger: GGACAGATTTCTTCGACCCAATCTCACATCCAATGG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | GCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCATTCTCGATGACCTTGTCCCATaGGATGTGAGATTGGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: APQVPTTMFCEITNKIILDDLVP*DVRLGR Trigger: TCGACCCAATCTCACATCCAATGGGACAAGGTCATC...GAGAATGATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | AAAATCCTTAGCTGGTGGATGTTCCCTGGGACTTTGGGTAGGGATAAGGTTCAACCATCAACATTAACGTaGGAGTCAGTAGCAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KILSWWMFPGTLGRDKVQPSTLT*ESVARV Trigger: GACTCTTGCTACTGACTCCAACGTTAATGTTGATGG...TTGAACCTTATCCCTACCCAAAGTCCCAGGGAACATCCACCAGCTAAGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCGTCCCATTGCCACCGTaGATCACCAGCTTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGRNWKSQILNGVLFGPVPLPP*ITSFFF Trigger: GAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGAC...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS TCA 90 bp | GTCTGTATCCTTGCTTTCTGTTTGATGACCTTGTCCCATTGGATGTaGGATTGGGTCGAAGAAATCTGTCCAGGAAACATCCTCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VCILAFCLMTLSHWM*DWVEEICPGNILLT Trigger: AGTCAAGAGGATGTTTCCTGGACAGATTTCTTCGACCCAATCTCACATCCAATGGGACAAGGTCATCAAACAGAAAGCAAGGATACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCGAGTCCCATTTTCCATaGTGTCTGGGTATTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKAPQVPTTMFCEITNKIESHFP*CLGIER Trigger: CCTTTCAATACCCAGACACAATGGAAAATGGGACTC...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | CGGGTCAAGATGGAAGATGGACCGGTACTTATTATGAATCAATTTATACCCTGTCCATTGGATGTGAGATaGGGTCGAAGAAATCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVKMEDGPVLIMNQFIPCPLDVR*GRRNLS Trigger: GGACAGATTTCTTCGACCCAATCTCACATCCAATGG...ACAGGGTATAAATTGATTCATAATAAGTACCGGTCCATCTTCCATCTTGACCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | TGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCCACGAGTCCCATTTTCCATaGTGTCTGGGTATTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WMFTLSFLLASPFMRRRHESHFP*CLGIER Trigger: CCTTTCAATACCCAGACACAATGGAAAATGGGACTC...GTGGCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCGCGTCTCTGATGGTTCCTaGTTCACCAAATGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: CWMFTLSFLLASPFMRRRVSDGS*FTKCTI Trigger: AATGGTGCATTTGGTGAACAAGGAACCATCAGAGAC...GCGCCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111194.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGGCGCCACAAGTCCCCACCACAATGTTTTGTGAAATCACTAATAAGATCCCATATCCAATTATTTaGTTTCTGAGCTGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: EKAPQVPTTMFCEITNKIPYPII*FLSCCM Trigger: CATGCAGCAGCTCAGAAACAAAATAATTGGATATGG...GATCTTATTAGTGATTTCACAAAACATTGTGGTGGGGACTTGTGGCGCCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS-3UTR CAA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGTTGTTATTCTTTGACTaGGATGGTTGTTGTGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLDVYTFISVGFSFYEKLLFFD*DGCCGP Trigger: CGGCCCACAACAACCATCCAAGTCAAAGAATAACAA...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
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| CDS-3UTR CAA 90 bp | CCCCTAGGAAGGAACTGGAAAAGTCAAATTCTTAATGGAGTATTATTTGGGCCCCCTCTTGACTCTGTGTaGTTATTCTTTGACTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLGRNWKSQILNGVLFGPPLDSV*LFFDLD Trigger: ATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGG...GGGCCCAAATAATACTCCATTAAGAATTTGACTTTTCCAGTTCCTTCCTAGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
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| CDS-3UTR CAA 90 bp | CTACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGCCAGGAAACATCCTCTaGACTCTGTGTTGTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLDVYTFISVGFSFYEKPGNIL*TLCCYS Trigger: AGAATAACAACACAGAGTCAAGAGGATGTTTCCTGG...CTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
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| CDS-3UTR CAA 90 bp | TACTGCTGGATGTTTACACTTTCATTTCTGTTGGCTTCTCCTTTTATGAGAAGGCCAGGAAACATCCTCTaGACTCTGTGTTGTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: YCWMFTLSFLLASPFMRRPGNIL*TLCCYS Trigger: AGAATAACAACACAGAGTCAAGAGGATGTTTCCTGG...CCTTCTCATAAAAGGAGAAGCCAACAGAAATGAAAGTGTAAACATCCAGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 |
||
| CDS-3UTR CAA 90 bp | AATATGGACATGAAGGTATCTTTCACCTCATTTGATTTTTACCCAAGGCAAAGACCTCTTGACTCTGTGTaGTTATTCTTTGACTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NMDMKVSFTSFDFYPRQRPLDSV*LFFDLD Trigger: ATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGG...TCTTTGCCTTGGGTAAAAATCAAATGAGGTGAAAGATACCTTCATGTCCATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS TCA 72 bp | AGTCACAGTGCGGGAACTCCCCCTGGAGTCCTTGGATaGGTCTCGATCTCTGGTGGCCAAGGTGCTCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHSAGTPPGVLG*VSISGGQGAPD Trigger: ATCCGGAGCACCTTGGCCACCAGAGATCGAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCACTGTGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099673.9 |
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| CDS CCA 72 bp | CCAGTCCTGGTTGTCTTCTGTGCGGGCAGAAACCCGTaGAGTACTTGCAATGGTGGCCAAGGTGCTCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PVLVVFCAGRNP*STCNGGQGAPD Trigger: ATCCGGAGCACCTTGGCCACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
||
| CDS CAA 90 bp | GCCTCCCCGTTGAGCTCACTGGGTTTCCTGTCTTCCACCGTCCCATaGCCACCGTTGATCACCAGCTTTTTCTTCTGCCCACACCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASPLSSLGFLSSTVP*PPLITSFFFCPHLL Trigger: GAGAAGGTGTGGGCAGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGACGGTGGAAGACAGGAAACCCAGTGAGCTCAACGGGGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | CTGAAACCACGTCTCCTGCTGGGTAGCTGCTGCTTCTaGTGTACTATTAGGAGTGGTGGCCAAGGTGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LKPRLLLGSCCF*CTIRSGGQGAP Trigger: CGGAGCACCTTGGCCACCACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060516.14 |
||
| CDS GCA 72 bp | TTGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTGTaGGGGCAGAAACCCGTGGAGTACTTGCAATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LASTGSSPGCLL*GQKPVEYLQWW Trigger: CCACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
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| CDS CCA 72 bp | ATTCGGATCCATGAGTCACAGTGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTCGATCTCTGGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IRIHESQCGNSP*SPWMSLDLWWP Trigger: TGGCCACCAGAGATCGAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCACTGTGACTCATGGATCCGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099673.9 |
||
| CDS TCA 72 bp | TGGTTCGCACTTGAGTGTCCAGCTAATTCGGATCCATaGGTCACAGTGCGGGAACTCCCCCTGGAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WFALECPANSDP*VTVRELPLESL Trigger: CAAGGACTCCAGGGGGAGTTCCCGCACTGTGACTCATGGATCCGAATTAGCTGGACACTCAAGTGCGAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | TTGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTGTaGGGGCAGAAACCCGTGGAGTACTTGCAATGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LASTGSSPGCLL*GQKPVEYLQWY Trigger: GTACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS CCA 72 bp | GGGTTTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTaGTTGTCTTCTGTGCGGGCAGAAACCCGTGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GFEWFGFHWVQS*LSSVRAETRGV Trigger: TACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | ATTCGGATCCATGAGTCACAGTGCGGGAACTCCCCCTaGAGTCCTTGGATGAGTCTCGATCTCCTGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRIHESQCGNSP*SPWMSLDLLVR Trigger: CCTTACCAGGAGATCGAGACTCATCCAAGGACTCCAGGGGGAGTTCCCGCACTGTGACTCATGGATCCGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | CCATCCTGGTGGTTGTCTGGAGTAGTACTTCTGGGTTTGAATGGTTaGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTGTGCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSWWLSGVVLLGLNG*ASTGSSPGCLLCGQ Trigger: CTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCACCAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | TGGGTTTCCTGTCTTCCACCGTCCCATTGCCACCGTTaGTCACCAGCTTTTTCTTCTGCCCACACCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WVSCLPPSHCHR*SPAFSSAHTFS Trigger: GGAGAAGGTGTGGGCAGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGACGGTGGAAGACAGGAAACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | TCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTGCTaGTTCTGCTGTACTATTAGGAGTGGTGGCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVLKPRLLLGSC*FCCTIRSGGQG Trigger: ACCTTGGCCACCACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060516.14 |
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| CDS GCA 72 bp | CCATCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTaGTGCTTCTGCTGTACTATTAGGAGTGGTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSVLKPRLLLGS*CFCCTIRSGGQ Trigger: TTGGCCACCACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060516.14 |
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| CDS CCA 72 bp | CTCTGCAGATTCCGGGTCTCGTCAGCTGTCATACACTaGTCCGGGGTCTCTGATGGTTCCTTGTTCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LCRFRVSSAVIH*SGVSDGSLFTK Trigger: TTTGGTGAACAAGGAACCATCAGAGACCCCGGACCAGTGTATGACAGCTGACGAGACCCGGAATCTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | CTGGGTTTCCTGTCTTCCACCGTCCCATTGCCACCGTaGATCACCAGCTTTTTCTTCTGCCCACACCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGFLSSTVPLPP*ITSFFFCPHLL Trigger: GAGAAGGTGTGGGCAGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGACGGTGGAAGACAGGAAACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | ACTTCTGGGTTTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTGGTaGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTTGCAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSGFEWFGFHWVQSW*SSVRAETRGVLAMV Trigger: CACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111198.9 |
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| CDS TCA 72 bp | CCAGCTTTTTCTTCTGCCCACACCTTCTCCTACTATTaGCCGCGATGCAGACGGCAAGAATCAGAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PAFSSAHTFSYY*PRCRRQESEPV Trigger: CACTGGCTCTGATTCTTGCCGTCTGCATCGCGGTCAATAGTAGGAGAAGGTGTGGGCAGAAGAAAAAGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | GGTCTCGTCAGCTGTCATACACTGGTCCGGGGTCTCTaGTGGTTCCTTGTTCACCAAATGCACCATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLVSCHTLVRGL*WFLVHQMHHFL Trigger: CAGGAAATGGTGCATTTGGTGAACAAGGAACCATCAGAGACCCCGGACCAGTGTATGACAGCTGACGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | GTTCCGGGGTCCAATTTTCTCCATGAGCACTGGTGCTaGTTCTGTCTATATTGGTGGCCAAGGTGCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPGSNFLHEHWC*FCLYWWPRCSG Trigger: TCCGGAGCACCTTGGCCACCAATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111194.8 |
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| CDS CCA 72 bp | TTCAGTAGGAAGGTAGGTGTGCAAAATGTAGCTTTCTaGGGTGCTCTTCTCGATGGTGGAGCCGCTGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSRKVGVQNVAF*GALLDGGAAAD Trigger: GTCAGCAGCGGCTCCACCATCGAGAAGAGCACCCCAGAAAGCTACATTTTGCACACCTACCTTCCTACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TTTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTGGTaGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: FEWFGFHWVQSW*SSVRAETRGVL Trigger: AAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TTGAGCTCACTGGGTTTCCTGTCTTCCACCGTCCCATaGCCACCGTTGATCACCAGCTTTTTCTTCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSLGFLSSTVP*PPLITSFFFCP Trigger: TGGGCAGAAGAAAAAGCTGGTGATCAACGGTGGCAATGGGACGGTGGAAGACAGGAAACCCAGTGAGCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | ACTTCTGGGTTTGAATGGTTTGGCTTCCACTGGGTCCAGTCCTGGTaGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTTGCAATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TSGFEWFGFHWVQSW*SSVRAETRGVLAMV Trigger: TACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS TCA 72 bp | AAAGGAGGCTGTGGTTCCGGGGTCCAATTTTCTCCATaGGCACTGGTGCTGATTCTGTCTATATTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KGGCGSGVQFSP*ALVLILSILVA Trigger: GGCCACCAATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCACAGCCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111194.8 |
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| CDS GCA 72 bp | CTGAAACCACGTCTCCTGCTGGGTAGCTGCTGCTTCTaGTGTACTATTAGGAGTTGTGCTTGTAGCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPRLLLGSCCF*CTIRSCACSMW Trigger: CCACATGCTACAAGCACAACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | TCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTGCTaGTTCTGCTGTACTATTAGGAGTTGTGCTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVLKPRLLLGSC*FCCTIRSCACS Trigger: GCTACAAGCACAACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | CCATCCGTTCTGAAACCACGTCTCCTGCTGGGTAGCTaGTGCTTCTGCTGTACTATTAGGAGTTGTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSVLKPRLLLGS*CFCCTIRSCAC Trigger: ACAAGCACAACTCCTAATAGTACAGCAGAAGCAGCAGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | GTAGCGGCAGGTTACATTCAAATCGATCTGCTGATGTaGATGTGCCAGGCTCAACTGCAAGAGGCAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAAGYIQIDLLM*MCQAQLQEAKS Trigger: GGACTTTGCCTCTTGCAGTTGAGCCTGGCACATCCACATCAGCAGATCGATTTGAATGTAACCTGCCGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | CTGGTGGTTGTCTGGAGTAGTACTTCTGGGTTTGAATaGTTTGGCTTCCACTGGGTCCAGTCCTGGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVVVWSSTSGFE*FGFHWVQSWLS Trigger: AGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | CTCATAGGACCAGAAGTTGTGGTCACTCCACTGTCCTaGTTCGCACTTGAGTGTCCAGCTAATTCGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LIGPEVVVTPLS*FALECPANSDP Trigger: TGGATCCGAATTAGCTGGACACTCAAGTGCGAACCAGGACAGTGGAGTGACCACAACTTCTGGTCCTATGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | CAGAAGTTGTGGTCACTCCACTGTCCTGGTTCGCACTaGAGTGTCCAGCTAATTCGGATCCATGAGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QKLWSLHCPGSH*SVQLIRIHESQ Trigger: CTGTGACTCATGGATCCGAATTAGCTGGACACTCAAGTGCGAACCAGGACAGTGGAGTGACCACAACTTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | CTATATCAGCCATCCTGGTGGTTGTCTGGAGTAGTACTTCTGGGTTaGAATGGTTTGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LYQPSWWLSGVVLLG*NGLASTGSSPGCLL Trigger: CAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCACCAGGATGGCTGATATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS TCA 72 bp | GTTCCGGGGTCCAATTTTCTCCATGAGCACTGGTGCTaGTTCTGTCTATATCAGCCATCCTGGTGGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPGSNFLHEHWC*FCLYQPSWWLS Trigger: AGACAACCACCAGGATGGCTGATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS TCA 72 bp | AAAGGAGGCTGTGGTTCCGGGGTCCAATTTTCTCCATaGGCACTGGTGCTGATTCTGTCTATATCAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: KGGCGSGVQFSP*ALVLILSISAI Trigger: GATGGCTGATATAGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCACAGCCTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS GCA 72 bp | AGTAGTTGTATCTGTGGGAAGACTTCCACCTCTTCTTaGATCTTTAGCGCCGCTCTTAGTGGTGGCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCICGKTSTSS*IFSAALSGGQG Trigger: ACCTTGGCCACCACTAAGAGCGGCGCTAAAGATGCAAGAAGAGGTGGAAGTCTTCCCACAGATACAACTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111192.3 |
||
| CDS CCA 72 bp | CCAGTCCTGGTTGTCTTCTGTGCGGGCAGAAACCCGTaGAGTACTTGCAATGGTACTGGAGATAAAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLVVFCAGRNP*STCNGTGDKIF Trigger: GAAGATTTTATCTCCAGTACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAACCAGGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
||
| CDS CAA 72 bp | TGGTTGTCTGGAGTAGTACTTCTGGGTTTGAATGGTTaGGCTTCCACTGGGTCCAGTCCTGGTTGTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLSGVVLLGLNG*ASTGSSPGCLL Trigger: CAGAAGACAACCAGGACTGGACCCAGTGGAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
||
| CDS CAA 90 bp | CCATCACGGTTGACAATAGTTATGGTAACCGGTCCATCGAAGGAATaGGGTAGGTCTGTGACTGATGTACAGTCTTCTTCAGGAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PSRLTIVMVTGPSKE*GRSVTDVQSSSGGA Trigger: AGCCCCTCCTGAAGAAGACTGTACATCAGTCACAGACCTACCCAATTCCTTCGATGGACCGGTTACCATAACTATTGTCAACCGTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | TTCCTCATTTGGCTCCCAGCCTGTTGGGTTGGTATTTaGCTCCGTACCAGGCATCTTCGTTGTTGTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLIWLPACWVGI*LRTRHLRCCMK Trigger: CTTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACCCAACAGGCTGGGAGCCAAATGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS GCA 72 bp | ACTGTAGCGGCCATTTTTCTCCACATGGAATACACCTaGGTAGCGGCAGGTTACATTCAAATCGATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TVAAIFLHMEYT*VAAGYIQIDLL Trigger: CAGCAGATCGATTTGAATGTAACCTGCCGCTACGCAGGTGTATTCCATGTGGAGAAAAATGGCCGCTACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | CCTGTTCAAGTCTTCCACCAAATGGGTATTTGGAGCTaGAGTAGGCTGAAGGGTTGTACTATGACTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PVQVFHQMGIWS*SRLKGCTMTGV Trigger: GACTCCAGTCATAGTACAACCCTTCAGCCTACTGCAGCTCCAAATACCCATTTGGTGGAAGACTTGAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111191.9 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | AGTAGTTGTATCTGTGGGAAGACTTCCACCTCTTCTTaGATCTTTAGCGCCGCTCTTAGTGCTAGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSCICGKTSTSS*IFSAALSARWQ Trigger: CTGCCATCTAGCACTAAGAGCGGCGCTAAAGATGCAAGAAGAGGTGGAAGTCTTCCCACAGATACAACTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | CATGTTTCAAAACCCTTGCTCAGGGCCAACTTCATTTaGTCCATGGTGGGTAAGGTACTGTTGAAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HVSKPLLRANFI*SMVGKVLLKAW Trigger: CCAGGCTTTCAACAGTACCTTACCCACCATGGACCAAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | CCTTCTATGAACCCATACCTGCATGTTTCAAAACCCTaGCTCAGGGCCAACTTCATTTGGTCCATGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSMNPYLHVSKP*LRANFIWSMVG Trigger: ACCCACCATGGACCAAATGAAGTTGGCCCTGAGCAAGGGTTTTGAAACATGCAGGTATGGGTTCATAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | AATAACCATGAAAACCAGTTCTGGGCTTCTTGCCTCTaGGGTGGTGTTTCAGGGGTGGTCATCAAGGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: NNHENQFWASCL*GGVSGVVIKAV Trigger: TACAGCCTTGATGACCACCCCTGAAACACCACCCAAGAGGCAAGAAGCCCAGAACTGGTTTTCATGGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CAA 90 bp | CCCAGCCTGTTGGGTTGGTATTTGACTCCGTACCAGGCATCTTCGTaGTTGTATGAAGATGACTCTTGGACTCTGATGGTTGAAATAACC | + |
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Preference number: 6 (lower is better) Translates to: PSLLGWYLTPYQASS*LYEDDSWTLMVEIT Trigger: GGTTATTTCAACCATCAGAGTCCAAGAGTCATCTTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACCCAACAGGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS TCA 72 bp | ACTCCTGTGTGGTTGGCTGCACAGATAGCGTTGGGATaGATCCTCGGAATTACCACATTTCCTTCTATGAAC | + |
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Preference number: 6 (lower is better) Translates to: TPVWLAAQIALG*ILGITTFPSMN Trigger: GTTCATAGAAGGAAATGTGGTAATTCCGAGGATTCATCCCAACGCTATCTGTGCAGCCAACCACACAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CCA 72 bp | TTCATCCTGATACTCATGGTTATTGAAAGGAGGCTGTaGTTCCGGGGTCCAATTTTCTCCATGAGCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: FILILMVIERRL*FRGPIFSMSTG Trigger: ACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCACAGCCTCCTTTCAATAACCATGAGTATCAGGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TTTCCTCATTTGGCTCCCAGCCTGTTGGGTTGGTATTaGACTCCGTACCAGGCATCTTCGTTGTTGTATGAA | + |
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Preference number: 6 (lower is better) Translates to: FPHLAPSLLGWY*TPYQASSLLYE Trigger: TTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACCCAACAGGCTGGGAGCCAAATGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CAA 90 bp | GAAATCTGTCCAGGAAACATCCTCTTGACTCTGTGTTGTTATTCTTaGACTTGGATGGTTGTTGTGGGCCGAAGCAGTTGTCCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EICPGNILLTLCCYS*TWMVVVGRSSCPFC Trigger: ACAGAAGGGACAACTGCTTCGGCCCACAACAACCATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGGATGTTTCCTGGACAGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | TTGGGTCGAAGAAATCTGTCCAGGAAACATCCTCTTGACTCTGTGTaGTTATTCTTTGACTTGGATGGTTGTTGTGGGCCGAAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGRRNLSRKHPLDSV*LFFDLDGCCGPKQL Trigger: CAACTGCTTCGGCCCACAACAACCATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGGATGTTTCCTGGACAGATTTCTTCGACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | GGTGGAGCCGCTGCTGACATCGTCATCTATAATGTTTaGAGCATCGATGTCTTCTTGGTGTGTTCTATACTC | + |
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Preference number: 6 (lower is better) Translates to: GGAAADIVIYNV*SIDVFLVCSIL Trigger: GAGTATAGAACACACCAAGAAGACATCGATGCTTCAAACATTATAGATGACGATGTCAGCAGCGGCTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS TCA 72 bp | AGAGAAGTTCTGAGAATGACTCTGTGGAGTTGTCACTaGAAGTGGTCCTGTCCTGTTCAAGTCTTCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: REVLRMTLWSCH*KWSCPVQVFHQ Trigger: TTGGTGGAAGACTTGAACAGGACAGGACCACTTTCAGTGACAACTCCACAGAGTCATTCTCAGAACTTCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111191.9 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS GCA 72 bp | GTTGTCTTCTGTGCGGGCAGAAACCCGTGGAGTACTTaGAATGGTACTGGAGATAAAATCTTCATCATCATC | + |
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Preference number: 6 (lower is better) Translates to: VVFCAGRNPWST*NGTGDKIFIII Trigger: GATGATGATGAAGATTTTATCTCCAGTACCATTGCAAGTACTCCACGGGTTTCTGCCCGCACAGAAGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CCA 72 bp | CTGATTCTGTCTATATCAGCCATCCTGGTGGTTGTCTaGAGTAGTACTTCTGGGTTTGAATGGTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LILSISAILVVV*SSTSGFEWFGF Trigger: GAAGCCAAACCATTCAAACCCAGAAGTACTACTCCAGACAACCACCAGGATGGCTGATATAGACAGAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005218.15 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | CCAGGAAACATCCTCTTGACTCTGTGTTGTTATTCTTaGACTTGGATGGTTGTTGTGGGCCGAAGCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PGNILLTLCCYS*TWMVVVGRSSC Trigger: ACAACTGCTTCGGCCCACAACAACCATCCAAGTCAAAGAATAACAACACAGAGTCAAGAGGATGTTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TCTCGATCTCCTGGTAAGGAGCCATCAACATTAACGTaGGAGTCAGTAGCAAGAGTCACTTCAGTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SRSPGKEPSTLT*ESVARVTSVSP Trigger: TGGAGAAACTGAAGTGACTCTTGCTACTGACTCCAACGTTAATGTTGATGGCTCCTTACCAGGAGATCGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 90 bp | AGCCTGTTGGGTTGGTATTTGACTCCGTACCAGGCATCTTCGTTGTaGTATGAAGATGACTCTTGGACTCTGATGGTTGAAATAACCATG | + |
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Preference number: 6 (lower is better) Translates to: SLLGWYLTPYQASSL*YEDDSWTLMVEITM Trigger: CATGGTTATTTCAACCATCAGAGTCCAAGAGTCATCTTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACCCAACAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CAA 90 bp | TATCCTTGCTTTCTGTTTGATGACCTTGTCCCATTGGATGTGAGATaGGGTCGAAGAAATCTGTCCAGGAAACATCCTCTTGACTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: YPCFLFDDLVPLDVR*GRRNLSRKHPLDSV Trigger: CACAGAGTCAAGAGGATGTTTCCTGGACAGATTTCTTCGACCCAATCTCACATCCAATGGGACAAGGTCATCAAACAGAAAGCAAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | GGTTGGTATTTGACTCCGTACCAGGCATCTTCGTTGTaGTATGAAGATGACTCTTGGACTCTGATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GWYLTPYQASSL*YEDDSWTLMVE Trigger: TTCAACCATCAGAGTCCAAGAGTCATCTTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CAA 72 bp | TTGGGTTGGTATTTGACTCCGTACCAGGCATCTTCGTaGTTGTATGAAGATGACTCTTGGACTCTGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: LGWYLTPYQASS*LYEDDSWTLMV Trigger: AACCATCAGAGTCCAAGAGTCATCTTCATACAACAACGAAGATGCCTGGTACGGAGTCAAATACCAACCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS TCA 72 bp | ACTCGTTGTGGGCTCCTGAGTCTGAGTTGTGGACTGTaGATTACCAAACCAAGACCATATCCAATTATTTTG | + |
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Preference number: 6 (lower is better) Translates to: TRCGLLSLSCGL*ITKPRPYPIIL Trigger: CAAAATAATTGGATATGGTCTTGGTTTGGTAATTCACAGTCCACAACTCAGACTCAGGAGCCCACAACGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005218.15 |
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| CDS CCA 72 bp | TTCTGCTGTACTATTAGGAGTTGTGCTTGTAGCATGTaGGGTCTCCTCTTCATCCTGATACTCATGGTTATT | + |
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Preference number: 6 (lower is better) Translates to: FCCTIRSCACSM*GLLFILILMVI Trigger: AATAACCATGAGTATCAGGATGAAGAGGAGACCCCACATGCTACAAGCACAACTCCTAATAGTACAGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TTGACAATAGTTATGGTAACCGGTCCATCGAAGGAATaGGGTAGGTCTGTGACTGATGTACAGTCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LTIVMVTGPSKE*GRSVTDVQSSS Trigger: TGAAGAAGACTGTACATCAGTCACAGACCTACCCAATTCCTTCGATGGACCGGTTACCATAACTATTGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000099673.9 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TTTCTGTTTGATGACCTTGTCCCATTGGATGTGAGATaGGGTCGAAGAAATCTGTCCAGGAAACATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLFDDLVPLDVR*GRRNLSRKHPL Trigger: AAGAGGATGTTTCCTGGACAGATTTCTTCGACCCAATCTCACATCCAATGGGACAAGGTCATCAAACAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111198.9 |
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| CDS CAA 72 bp | TGGGAAGAGAGTCCCATTTTCCATTGTGTCTGGGTATaGAAAGGTGTAGCCTTCTACAGAAGTAGTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: WEESPIFHCVWV*KGVAFYRSSCI Trigger: GATACAACTACTTCTGTAGAAGGCTACACCTTTCAATACCCAGACACAATGGAAAATGGGACTCTCTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005218.15 ENSMUST00000060516.14 ENSMUST00000111190.9 ENSMUST00000111191.9 ENSMUST00000111192.3 ENSMUST00000111194.8 ENSMUST00000111198.9 |
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