Pregenerated sensors for CD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023274Ensembl transcript IDs: ENSMUST00000024044.7
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGTGTCTaGTACATTCATCTGGTCCCCAGGCCTCGGGCGATGAGACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GRLWKRRAEGRRQRV*YIHLVPRPRAMRQD Trigger: GTCCTGTCTCATCGCCCGAGGCCTGGGGACCAGATGAATGTAGCAGACACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 90 bp | CCCGCAGCCTCTCAGTCTTCATTTGCCCCTGACATGCTTCATGTGTaGCATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PAASQSSFAPDMLHV*HAQPPGPPCPTQLG Trigger: ACCAAGCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGTCAGGGGCAAATGAAGACTGAGAGGCTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | CTCCCTGCCCCACTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTaGTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LPAPLSLVPEPSRKL*CVFPDTSPTIRARC Trigger: GCACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 90 bp | GACAGACAGGCTTGGGAACAGAGGGAGGGAAACCGTGGCCGGTTGTaGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGTGTCTGCTACATT | + |
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Preference number: 1 (lower is better) Translates to: DRQAWEQREGNRGRL*KRRAEGRRQRVCYI Trigger: AATGTAGCAGACACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGTTCCCAAGCCTGTCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | AGAGCCCTTAGACCCCTGACCTCCTGGATGGAAGGCACAGCCACCTaGCACAATGCTCTCTCCATAAAGGACCCCAGCATGGTCCACTTC | + |
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Preference number: 1 (lower is better) Translates to: RALRPLTSWMEGTAT*HNALSIKDPSMVHF Trigger: GAAGTGGACCATGCTGGGGTCCTTTATGGAGAGAGCATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 90 bp | TGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTTaGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: CVTCTTSRPSLPHSA*SQSPLVNCAVYFQT Trigger: TGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | CATAAAGGACCCCAGCATGGTCCACTTCCCAGGCTCTGCACACACTaGGGCAGGTCTCTGTGCATCTCTCCCAGCCTCACTCTAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: HKGPQHGPLPRLCTH*GRSLCISPSLTLRE Trigger: TTCTCTTAGAGTGAGGCTGGGAGAGATGCACAGAGACCTGCCGCAGTGTGTGCAGAGCCTGGGAAGTGGACCATGCTGGGGTCCTTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 90 bp | AGACACCAGTCCCACCATCCGTGCCAGGTGCTATACACTGCCCTTTaGTCCAAGCAGACAGCTGGAAAAAGGTTCCAGGACCTTAGTCCG | + |
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Preference number: 1 (lower is better) Translates to: RHQSHHPCQVLYTAL*SKQTAGKRFQDLSP Trigger: CGGACTAAGGTCCTGGAACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | GAGGGATTTGAAACCAGAATGGCTCCTCCATCCTCTCAAGATCTCTaGCAGGGGCTGCGCTCCAGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: EGFETRMAPPSSQDL*QGLRSSVCVCVCVC Trigger: ACACACACACACACACACACACACACTGGAGCGCAGCCCCTGGCAGAGATCTTGAGAGGATGGAGGAGCCATTCTGGTTTCAAATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 90 bp | AACAGATCAAGACTCTCAGGGAGAGCCCTTAGACCCCTGACCTCCTaGATGGAAGGCACAGCCACCTGCCACAATGCTCTCTCCATAAAG | + |
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Preference number: 1 (lower is better) Translates to: NRSRLSGRALRPLTS*MEGTATCHNALSIK Trigger: CTTTATGGAGAGAGCATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCTCCCTGAGAGTCTTGATCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | TATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGCTATACACTaGCCTTTGATCCAAGCAGACAGCTGGAAAAAGGTTCCAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: YFQTPVPPSVPGAIH*PLIQADSWKKVPGP Trigger: AGGTCCTGGAACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 90 bp | CTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTaGTATACACTGCCCTTTGATCCAAGCAGACAGCTGGAAAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LCCVFPDTSPTIRAR*YTLPFDPSRQLEKG Trigger: ACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 90 bp | TTCGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTGTGTACACATaGGGGTCATGGTACATACATAGGGGACAACTTTCAAGAGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: FVCVCVCVCVCVVYT*GSWYIHRGQLSRVN Trigger: ATTAACTCTTGAAAGTTGTCCCCTATGTATGTACCATGACCCTCATGTGTACACAACACACACACACACACACACACATACACACACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | ACATGCTTCATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCGAGACAGGACGCAGGTaGTGGGCTGCAGGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TCFMCDMHNLPALPAPLSETGRR*WAAGGA Trigger: GGCCCCACCTGCAGCCCACCACCTGCGTCCTGTCTC...GCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CAA 90 bp | GCAGACAGACAGGCTTGGGAACAGAGGGAGGGAAACCGTGGCCGGTaGTGGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGTGTCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ADRQAWEQREGNRGR*WKRRAEGRRQRVCY Trigger: GTAGCAGACACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGTTCCCAAGCCTGTCTGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CAA 90 bp | ATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTaGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: MCDMHNLPALPAPLS*VPEPSRKLCCVFPD Trigger: GTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGAGGGAGGGAAACCGTaGCCGGTTGTGGAAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGEGGKP*PVVEEE Trigger: CTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTC...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTAACCGTGGCCGGTTGTaGAAGAGGAGAGCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGNRGRL*KRRAEG Trigger: GCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTT...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CAA 90 bp | TGTGTTCCATGTAGTGGCTTGGCTCTAGGGATCAGGAGCCCTGGGTaGGCCCTGACATCAGCACTTGTTAGCTGGGTAACCTTGGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: CVPCSGLALGIRSPG*ALTSALVSWVTLGS Trigger: ACTACCCAAGGTTACCCAGCTAACAAGTGCTGATGTCAGGGCCAACCCAGGGCTCCTGATCCCTAGAGCCAAGCCACTACATGGAACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR TCA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGTGTGCTTGAGTGTCTaGAACGCAGAGGGCAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGVCLSV*NAEGKL Trigger: GAGCTTGCCCTCTGCGTTTCAGACACTCAAGCACAC...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCCTTAGACCCCTGACCTCCTGGATGGAAGGCACAGCCACCTGCCACAATCTCCAGAGATCTGTGTaGTATTCATCCCTGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RALRPLTSWMEGTATCHNLQRSV*YSSLCS Trigger: GGAACACAGGGATGAATACCACACAGATCTCTGGAG...ATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCATCTCTCCCAGCCTCACTCTAAGAGAACTAGGGTTTTGGGGGAAGGAGGGATCCAAGCAGACAGCTaGAAAAAGGTTCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: VHLSQPHSKRTRVLGEGGIQADS*KKVPGP Trigger: AGGTCCTGGAACCTTTTTCCAGCTGTCTGCTTGGAT...CCCTCCTTCCCCCAAAACCCTAGTTCTCTTAGAGTGAGGCTGGGAGAGATGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTGTGTACACATGAGGGTCATGGTTCTGCTACATTCATCTaGTCCCCAGGCCTCGGGCGA | + |
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Preference number: 2 (lower is better) Translates to: CVYVCVCVCVLCTHEGHGSATFI*SPGLGR Trigger: TCGCCCGAGGCCTGGGGACCAGATGAATGTAGCAGA...ACCATGACCCTCATGTGTACACAACACACACACACACACACACACATACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR GCA 90 bp | AACGACAGAGGCAGAGGAGGCTGTGGATCTATGAGAAACAGATCAAGACTCTCAGAAGGCACAGCCACCTaGCACAATGCTCTCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: NDRGRGGCGSMRNRSRLSEGTAT*HNALSI Trigger: TATGGAGAGAGCATTGTGGCAGGTGGCTGTGCCTTC...TGAGAGTCTTGATCTGTTTCTCATAGATCCACAGCCTCCTCTGCCTCTGTCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR GCA 90 bp | GATCTGTGTGGTATTCATCCCTGTGTTCCATGTAGTGGCTTGGCTCTAGGGATCCATTTGCCCCTGACATaGTTCATGTGTGACATGCAC | + |
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Preference number: 2 (lower is better) Translates to: DLCGIHPCVPCSGLALGIHLPLT*FMCDMH Trigger: GTGCATGTCACACATGAAGCATGTCAGGGGCAAATG...GATCCCTAGAGCCAAGCCACTACATGGAACACAGGGATGAATACCACACAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR GCA 90 bp | AACGACAGAGGCAGAGGAGGCTGTGGATCTATGAGAAACAGATCAAGACTCTCAGGATTTCAGCGTGCATaGATGTGTGCAACATGCGTG | + |
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Preference number: 2 (lower is better) Translates to: NDRGRGGCGSMRNRSRLSGFQRA*MCATCV Trigger: CACGCATGTTGCACACATGCATGCACGCTGAAATCC...TGAGAGTCTTGATCTGTTTCTCATAGATCCACAGCCTCCTCTGCCTCTGTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CCA 90 bp | GATCTGTGTGGTATTCATCCCTGTGTTCCATGTAGTGGCTTGGCTCTAGGGATCTTAAGATATGCTGTTTaGATATATGGACAGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DLCGIHPCVPCSGLALGILRYAV*IYGQVC Trigger: ACACACCTGTCCATATATCCAAACAGCATATCTTAA...GATCCCTAGAGCCAAGCCACTACATGGAACACAGGGATGAATACCACACAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CAA 90 bp | ATATGCTGTTTGGATATATGGACAGGTGTGTGGCTTGGATGTGTGTaGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCAAATTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ICCLDIWTGVWLGCV*VHWLECESGLANSK Trigger: TTTTGAATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCACACACCTGTCCATATATCCAAACAGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 72 bp | TCTGCTACATTCATCTGGTCCCCAGGCCTCGGGCGATaGGACAGGACGCAGGTGGTGGGCTGCAGGTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SATFIWSPGLGR*DRTQVVGCRWG Trigger: GCCCCACCTGCAGCCCACCACCTGCGTCCTGTCTCATCGCCCGAGGCCTGGGGACCAGATGAATGTAGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | GCTTGGGAACAGAGGGAGGGAAACCGTGGCCGGTTGTaGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AWEQREGNRGRL*KRRAEGRRQRV Trigger: GACACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGTTCCCAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CAA 90 bp | AGAGCCCTTAGACCCCTGACCTCCTGGATGGAAGGCACAGCCACCTGCCACAATCCTGCCCCACTCAGCTaGGTCCCAGAGCCCTCTCGT | + |
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Preference number: 3 (lower is better) Translates to: RALRPLTSWMEGTATCHNPAPLS*VPEPSR Trigger: ACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGG...ATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | TGGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGTGTCTaGTACATTCATCTGGTCCCCAGGCCTCGGGCGATG | + |
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Preference number: 3 (lower is better) Translates to: WKRRAEGRRQRV*YIHLVPRPRAM Trigger: CATCGCCCGAGGCCTGGGGACCAGATGAATGTAGCAGACACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | CCCCAGCATGGTCCACTTCCCAGGCTCTGCACACACTaGGGCAGGTCTCTGTGCATCTCTCCCAGCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: PQHGPLPRLCTH*GRSLCISPSLT Trigger: AGTGAGGCTGGGAGAGATGCACAGAGACCTGCCGCAGTGTGTGCAGAGCCTGGGAAGTGGACCATGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | AGACAGACAGGCTTGGGAACAGAGGGAGGGAAACCGTaGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAG | + |
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Preference number: 3 (lower is better) Translates to: RQTGLGTEGGKP*PVVEEESRRPE Trigger: CTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGTTCCCAAGCCTGTCTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | TGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTTaGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: CTTSRPSLPHSA*SQSPLVNCAVY Trigger: ATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | AGACTCTCAGGGAGAGCCCTTAGACCCCTGACCTCCTaGATGGAAGGCACAGCCACCTGCCACAATGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RLSGRALRPLTS*MEGTATCHNAL Trigger: GAGAGCATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCTCCCTGAGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CAA 90 bp | AGAGCCCTTAGACCCCTGACCTCCTGGATGGAAGGCACAGCCACCTGCCACAATGGACAGGTGTGTGGCTaGGATGTGTGTTGGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: RALRPLTSWMEGTATCHNGQVCG*DVCWCT Trigger: AGTGCACCAACACACATCCAAGCCACACACCTGTCC...ATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 72 bp | TCTCAGTCTTCATTTGCCCCTGACATGCTTCATGTGTaGCATGCACAACCTCCCGGCCCTCCCTGCCCCACT | + |
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Preference number: 3 (lower is better) Translates to: SQSSFAPDMLHV*HAQPPGPPCPT Trigger: AGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGTCAGGGGCAAATGAAGACTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 72 bp | GCTGACTCCCGCAGCCTCTCAGTCTTCATTTGCCCCTaGCATGCTTCATGTGTGACATGCACAACCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: ADSRSLSVFICP*HASCVTCTTSR Trigger: CCGGGAGGTTGTGCATGTCACACATGAAGCATGTCAGGGGCAAATGAAGACTGAGAGGCTGCGGGAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | GAAACCAGAATGGCTCCTCCATCCTCTCAAGATCTCTaGCAGGGGCTGCGCTCCAGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ETRMAPPSSQDL*QGLRSSVCVCV Trigger: CACACACACACACACACTGGAGCGCAGCCCCTGGCAGAGATCTTGAGAGGATGGAGGAGCCATTCTGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | GACCTCCTGGATGGAAGGCACAGCCACCTGCCACAATaGTCTCTCCATAAAGGACCCCAGCATGGTCCACTT | + |
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Preference number: 3 (lower is better) Translates to: DLLDGRHSHLPQ*SLHKGPQHGPL Trigger: AAGTGGACCATGCTGGGGTCCTTTATGGAGAGAGCATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | CCACTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTaGTGTGTATTTCCAGACACCAGTCCCACCATCCGT | + |
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Preference number: 3 (lower is better) Translates to: PLSLVPEPSRKL*CVFPDTSPTIR Trigger: ACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR-3UTR CAA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTTGCAGACAGACAGGCTaGGGAACAGAGGGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGCRQTG*GTEGGK Trigger: TTTCCCTCCCTCTGTTCCCAAGCCTGTCTGTCTGCA...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 72 bp | TCCCACCATCCGTGCCAGGTGCTATACACTGCCCTTTaGTCCAAGCAGACAGCTGGAAAAAGGTTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SHHPCQVLYTAL*SKQTAGKRFQD Trigger: GTCCTGGAACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | GTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTaGTATACACTGCCCTTTGATCCAAGCAGACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VFPDTSPTIRAR*YTLPFDPSRQL Trigger: CAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR GCA 72 bp | ACACCAGTCCCACCATCCGTGCCAGGTGCTATACACTaGCCTTTGATCCAAGCAGACAGCTGGAAAAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: TPVPPSVPGAIH*PLIQADSWKKV Trigger: AACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | GCTGAAGCAGGCAAACGACAGAGGCAGAGGAGGCTGTaGATCTATGAGAAACAGATCAAGACTCTCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: AEAGKRQRQRRL*IYEKQIKTLRE Trigger: CTCCCTGAGAGTCTTGATCTGTTTCTCATAGATCCACAGCCTCCTCTGCCTCTGTCGTTTGCCTGCTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR TCA 72 bp | CAGCAGCGAAGAATAAATAAGCTGATGGGGTGTGCTTaGGTGTCTGAAACGCAGAGGGCAAGCTCTGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: QQRRINKLMGCA*VSETQRASSAD Trigger: GTCTGCAGAGCTTGCCCTCTGCGTTTCAGACACTCAAGCACACCCCATCAGCTTATTTATTCTTCGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| 3UTR CCA 72 bp | AGCCCTGGGTTGGCCCTGACATCAGCACTTGTTAGCTaGGTAACCTTGGGTAGTCATTCAACCAAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPGLALTSALVS*VTLGSHSTKFH Trigger: ATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAGTGCTGATGTCAGGGCCAACCCAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTAGCTGGGTAACCTTGGGTAGTCATTCAACCAAGTTCCATTTCACTAGGCCTCTCAGTCTTCATTaGCCCCTGACATGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LVSWVTLGSHSTKFHFTRPLSLH*PLTCFM Trigger: CATGAAGCATGTCAGGGGCAAATGAAGACTGAGAGG...CCTAGTGAAATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTGTGTACACATGAGGGTCATGGTTGGCTTGGATGTGTGTaGGTGCACTGGTTAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: CVYVCVCVCVLCTHEGHGWLGCV*VHWLEC Trigger: ACATTCTAACCAGTGCACCAACACACATCCAAGCCA...ACCATGACCCTCATGTGTACACAACACACACACACACACACACACATACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CCA 72 bp | TGGACAGGTGTGTGGCTTGGATGTGTGTTGGTGCACTaGTTAGAATGTGAGTCTGGTCTTGCAAATTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: WTGVWLGCVLVH*LECESGLANSK Trigger: TTTTGAATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCACACACCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR TCA 72 bp | GTATGTGTGTGTGTGTGTGTGTGTGTTGTGTACACATaGGGGTCATGGTACATACATAGGGGACAACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVVYT*GSWYIHRGQLS Trigger: TGAAAGTTGTCCCCTATGTATGTACCATGACCCTCATGTGTACACAACACACACACACACACACACACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR GCA 72 bp | CCAAGTTCCATTTCACTAGGGATGACTGGTTATCTCTaGCATCTTAGTCATCACTGTCAGCTTGTAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: PSSISLGMTGYL*HLSHHCQLVGF Trigger: AAATCCTACAAGCTGACAGTGATGACTAAGATGGCAGAGATAACCAGTCATCCCTAGTGAAATGGAACTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTAGCTGGGTAACCTTGGGTAGTCATTCAACCAAGTTCCATTTCACTAGGAATGTGAGTCTGGTCTaGCAAATTCAAAAGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVSWVTLGSHSTKFHFTRNVSLV*QIQKRS Trigger: GCTTCTCTTTTGAATTTGCAAGACCAGACTCACATT...CCTAGTGAAATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CCA 72 bp | ATTAAGATATGCTGTTTGGATATATGGACAGGTGTGTaGCTTGGATGTGTGTTGGTGCACTGGTTAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: IKICCLDIWTGV*LGCVLVHWLEC Trigger: ACATTCTAACCAGTGCACCAACACACATCCAAGCCACACACCTGTCCATATATCCAAACAGCATATCTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | CAGGCTTGGGAACAGAGGGAGGGAAACCGTGGCCGGTaGTGGAAGAGGAGAGCAGAAGGCCGGAGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QAWEQREGNRGR*WKRRAEGRRQR Trigger: ACGCTGCCTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGTTCCCAAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGGAGGGAAACCGTGGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAGGTCAGGCTCTGCCCTTaGAACAGGCTGGTACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEGGKPWPVVEEESRRPEVRLCP*NRLVPG Trigger: TCCGGGTACCAGCCTGTTGCAAGGGCAGAGCCTGAC...CTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | TCCATAAAGGACCCCAGCATGGTCCACTTCCCAGGCTCTGCACACACTGCGGCAGCTGCCTGGCGCTGTTaGTGCCGGCACCTGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIKDPSMVHFPGSAHTAAAAWRC*CRHLTQ Trigger: CTGTGTCAGGTGCCGGCACCAACAGCGCCAGGCAGC...TGCCGCAGTGTGTGCAGAGCCTGGGAAGTGGACCATGCTGGGGTCCTTTATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | ATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTaGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MHNLPALPAPLS*VPEPSRKLCCV Trigger: TACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | TCCATAAAGGACCCCAGCATGGTCCACTTCCCAGGCTCTGCACACACTGCGGCAGCAGGGCAGTTCTGCTaGTTCCCCTTCCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIKDPSMVHFPGSAHTAAAGQFC*FPFLPQ Trigger: CTGGGGAAGGAAGGGGAATCAGCAGAACTGCCCTGC...TGCCGCAGTGTGTGCAGAGCCTGGGAAGTGGACCATGCTGGGGTCCTTTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAGAAGCAGGCATCATGGGAAGCTGAGGCTGACTCCCGCAGCCTCTCAGGAGACCCTGGCCTCCTaGTTCTCCTGCTTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRSRHHGKLRLTPAASQETLAS*FSCFRV Trigger: GACCCTGAAGCAGGAGAACCAGGAGGCCAGGGTCTC...CTGAGAGGCTGCGGGAGTCAGCCTCAGCTTCCCATGATGCCTGCTTCTCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | GCCCCACTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGTTGGTGCCGGCACCTaGCACAGCAGAGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APLSLVPEPSRKLCCVFPVGAGT*HSRGCR Trigger: TCTGCATCCTCTGCTGTGTCAGGTGCCGGCACCAAC...TGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | TCCATAAAGGACCCCAGCATGGTCCACTTCCCAGGCTCTGCACACACTGCGGCAGCCTCCTGGTTCTCCTaGTTCAGGGTCAGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SIKDPSMVHFPGSAHTAAASWFS*FRVSLI Trigger: GATGAGACTGACCCTGAAGCAGGAGAACCAGGAGGC...TGCCGCAGTGTGTGCAGAGCCTGGGAAGTGGACCATGCTGGGGTCCTTTATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | GCCCCACTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCACTGAGACATTCGTGCTaGCTGGCGCTGTTGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: APLSLVPEPSRKLCCVFPLRHSC*LALLVP Trigger: CGGCACCAACAGCGCCAGGCAGCACGAATGTCTCAG...TGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | ACATGCTTCATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCTTTCCTCTGCAAAGTTaGGTGGGAAGGAGAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCFMCDMHNLPALPAPLSFPLQS*VGRRTP Trigger: CGGAGTTCTCCTTCCCACTCAACTTTGCAGAGGAAA...GCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTCATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCCCCAGAATCTTCCTCTaGTCAGAGAACTTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCFMCDMHNLPALPAPLSPRIFL*SENFQV Trigger: CACCTGGAAGTTCTCTGACCAGAGGAAGATTCTGGG...GCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGGAGGGAAACCGTGGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAGCCTGAACCCTTAGGTTaGACATGGAGAGAACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEGGKPWPVVEEESRRPEPEPLG*TWRELW Trigger: CCAAAGTTCTCTCCATGTCCAACCTAAGGGTTCAGG...CTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | CTGTGTGGTATTCATCCCTGTGTTCCATGTAGTGGCTaGGCTCTAGGGATCAGGAGCCCTGGGTTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGIHPCVPCSG*ALGIRSPGLAL Trigger: CAGGGCCAACCCAGGGCTCCTGATCCCTAGAGCCAAGCCACTACATGGAACACAGGGATGAATACCACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | GTGCATCTCTCCCAGCCTCACTCTAAGAGAACTAGGGTTTTGGGGGAAGGAGGGGATCTGAGACATTCGTaGTGCCTGGCGCTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLSQPHSKRTRVLGEGGDLRHS*CLALLV Trigger: CACCAACAGCGCCAGGCAGCACGAATGTCTCAGATC...CCCTCCTTCCCCCAAAACCCTAGTTCTCTTAGAGTGAGGCTGGGAGAGATGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTCATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCCCCTTAGGTTGGACATaGAGAGAACTTTGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCFMCDMHNLPALPAPLSPLGWT*RELWNH Trigger: GTGGTTCCAAAGTTCTCTCCATGTCCAACCTAAGGG...GCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | CTACATTCATCTGGTCCCCAGGCCTCGGGCGATGAGACAGGACGCAGGTGGTGGCCTCTTTGTTCTTTATaGAGAAGGAGATCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSSGPQASGDETGRRWWPLCSL*RRRSRA Trigger: AGCCCTGGATCTCCTTCTCCATAAAGAACAAAGAGG...CCACCACCTGCGTCCTGTCTCATCGCCCGAGGCCTGGGGACCAGATGAATGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | TGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCAATCCGGTGGGGGCACTaGCAGGTCTTCTTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WSQSPLVNCAVYFQTPVPIRWGH*QVFFSL Trigger: CAGTGAGAAGAAGACCTGCCAGTGCCCCCACCGGAT...TGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTCTCCCAGCCTCACTCTAAGAGAACTAGGGTTTTGGGGGAAGGAGGGACCAGGTTCACTTCCTaGTGCAGTGTCCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLSQPHSKRTRVLGEGGTRFTS*CSVPLS Trigger: GGACAAAGGGACACTGCATCAGGAAGTGAACCTGGT...CCCTCCTTCCCCCAAAACCCTAGTTCTCTTAGAGTGAGGCTGGGAGAGATGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | CTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGACACCAGGAGTTGTGACAGCTaGAGCAGCAGCAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVPEPSRKLCCVFPDTRSCDS*SSSSSK Trigger: CTTGCTGCTGCTGCTGCTGCAGCTGTCACAACTCCT...GGTGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | GTGCATCTCTCCCAGCCTCACTCTAAGAGAACTAGGGTTTTGGGGGAAGGAGGGACACCTTTGCCATGCTaGCCCAGAATCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLSQPHSKRTRVLGEGGTPLPC*PRIFLW Trigger: CCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGT...CCCTCCTTCCCCCAAAACCCTAGTTCTCTTAGAGTGAGGCTGGGAGAGATGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCTTAGACCCCTGACCTCCTGGATGGAAGGCACAGCCACCTGCCACAATGAGTCAGAGTCAGGTTaGCAGAACCAGCAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RALRPLTSWMEGTATCHNESESG*QNQQTE Trigger: TTCAGTTTGCTGGTTCTGGCAACCTGACTCTGACTC...ATTGTGGCAGGTGGCTGTGCCTTCCATCCAGGAGGTCAGGGGTCTAAGGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | AATTCAAAAGAGAAGCAGGCATCATGGGAAGCTGAGGCTGACTCCCGCAGCCTCTCACTCAGTAGACACTaGCACAGCCCTGTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKEKQASWEAEADSRSLSLSRH*HSPVSG Trigger: CCCTGAGACAGGGCTGTGGCAGTGTCTACTGAGTGA...GAGGCTGCGGGAGTCAGCCTCAGCTTCCCATGATGCCTGCTTCTCTTTTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | GTCCCACCATCCGTGCCAGGTGCTATACACTGCCCTTaGATCCAAGCAGACAGCTGGAAAAAGGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPPSVPGAIHCP*IQADSWKKVPG Trigger: TCCTGGAACCTTTTTCCAGCTGTCTGCTTGGATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | CTACATTCATCTGGTCCCCAGGCCTCGGGCGATGAGACAGGACGCAGGTGGTGGGAACTTTGGAACCACTaGCAACTTTACCCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHSSGPQASGDETGRRWWELWNH*QLYPFC Trigger: ACAAAAAGGGTAAAGTTGTCAGTGGTTCCAAAGTTC...CCACCACCTGCGTCCTGTCTCATCGCCCGAGGCCTGGGGACCAGATGAATGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGAAGGAGAACTCCGCTaGCTCTCCCTCACTCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGEGELR*LSLTLI Trigger: TATAAGAGTGAGGGAGAGTCAGCGGAGTTCTCCTTC...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTCTCCCAGCCTCACTCTAAGAGAACTAGGGTTTTGGGGGAAGGAGGGAAAGTATTGTTGAGCTaGGCCACTTTCATCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VHLSQPHSKRTRVLGEGGKVLLS*ATFITT Trigger: GGTGGTGATGAAAGTGGCTCAGCTCAACAATACTTT...CCCTCCTTCCCCCAAAACCCTAGTTCTCTTAGAGTGAGGCTGGGAGAGATGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | CTCGTAAACTGTGCTGTGTATTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGAAAGAATCCTTCTCTaGCTTCCACATCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVNCAVYFQTPVPPSVPGERILL*LPHQLS Trigger: GGAGAGCTGATGTGGAAGGCAGAGAAGGATTCTTTC...ACCTGGCACGGATGGTGGGACTGGTGTCTGGAAATACACAGCACAGTTTACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGACACCAGTCCCACCATCCGTGCCAGGTGCTATACACTGCCCTTTGATGCACTGAGAGTGTCATaGCGAACCAGTTCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPDTSPTIRARCYTLPFDALRVS*RTSSFS Trigger: AGAAAAAGAACTGGTTCGGCATGACACTCTCAGTGC...ATCAAAGGGCAGTGTATAGCACCTGGCACGGATGGTGGGACTGGTGTCTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTTGGTCCCAGAGCCCTCTCGTAAACTGTGCTGTGTATTTCCAGACACCAAGGAGATCCAGGGCTaGAAGAAAGAATCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVPEPSRKLCCVFPDTKEIQG*KKESFS Trigger: AGAGAAGGATTCTTTCTTCCAGCCCTGGATCTCCTT...GGTGTCTGGAAATACACAGCACAGTTTACGAGAGGGCTCTGGGACCAAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGGATGTGTGTTGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCAAATGTGATAGCTGTGCTCTaGAAACCCAGCACTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGCVLVHWLECESGLANVIAVL*KPSTES Trigger: ACTCTCAGTGCTGGGTTTTCAGAGCACAGCTATCAC...ATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTTAGCTGGGTAACCTTGGGTAGTCATTCAACCAAGTTCCATTTCACTAGGCCTTCAGCTGGAGCTTaGGGTCTTTGGTGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSWVTLGSHSTKFHFTRPSAGA*GLWWTF Trigger: AAAAGTCCACCAAAGACCTCAAGCTCCAGCTGAAGG...CCTAGTGAAATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGGATGTGTGTTGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCAAATTCCTGGAGTCCATCTTaGCCTTATCACCTTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLGCVLVHWLECESGLANSWSPS*PYHLHS Trigger: TGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGA...ATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTTAGCTGGGTAACCTTGGGTAGTCATTCAACCAAGTTCCATTTCACTAGGAGCGTTTCCTTCAGCTaGAGCTTGAGGTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSWVTLGSHSTKFHFTRSVSFS*SLRSLV Trigger: CACCAAAGACCTCAAGCTCCAGCTGAAGGAAACGCT...CCTAGTGAAATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGATGTGTGTTGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCAAATCCTCTGGATAAAACCTaGATCCTGGAGTCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLGCVLVHWLECESGLANPLDKT*ILESIL Trigger: CAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGG...ATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | TTGGATATATGGACAGGTGTGTGGCTTGGATGTGTGTaGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDIWTGVWLGCV*VHWLECESGLA Trigger: TGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCACACACCTGTCCATATATCCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | TTGGCCCTGACATCAGCACTTGTTAGCTGGGTAACCTaGGGTAGTCATTCAACCAAGTTCCATTTCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LALTSALVSWVT*GSHSTKFHFTR Trigger: CCTAGTGAAATGGAACTTGGTTGAATGACTACCCAAGGTTACCCAGCTAACAAGTGCTGATGTCAGGGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| 3UTR CAA 72 bp | TGTTCGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTaGTGTACACATGAGGGTCATGGTACATACATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSCVYVCVCVCV*CTHEGHGTYIG Trigger: CCCTATGTATGTACCATGACCCTCATGTGTACACAACACACACACACACACACACACATACACACACGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | TGGGGGCACTGGCAGGTCTTCTTCTCACTGAGGAGCCTCTTGATCTaGGACATTCGTGCTGCCTGGCGCTGTTGGTGCCGGCACCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: WGHWQVFFSLRSLLI*DIRAAWRCWCRHLT Trigger: TGTCAGGTGCCGGCACCAACAGCGCCAGGCAGCACGAATGTCTCAGATCAAGAGGCTCCTCAGTGAGAAGAAGACCTGCCAGTGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | CTGCTGATTCCCCTTCCTTCCCCAGCACCAGCGTCTTCCCTTGAGTaGCAGCTAGGAGTTGTGACAGCTGCAGCAGCAGCAGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLIPLPSPAPASSLE*QLGVVTAAAAAAAS Trigger: GCTTGCTGCTGCTGCTGCTGCAGCTGTCACAACTCCTAGCTGTCACTCAAGGGAAGACGCTGGTGCTGGGGAAGGAAGGGGAATCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | AATTCAAAAGAGAAGCAGGCATCATGGGAAGCTGAGGCTGACTCCCGCAGCCTCTGCTGCCTGGCGCTGTaGGTGCCGGCACCTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: NSKEKQASWEAEADSRSLCCLAL*VPAPDT Trigger: TGTGTCAGGTGCCGGCACCAACAGCGCCAGGCAGCA...GAGGCTGCGGGAGTCAGCCTCAGCTTCCCATGATGCCTGCTTCTCTTTTGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | AGTTCTGCTGATTCCCCTTCCTTCCCCAGCACCAGCGTCTTCCCTTaGGTGACAGCTAGGAGTTGTGACAGCTGCAGCAGCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSADSPSFPSTSVFP*VTARSCDSCSSSSS Trigger: GCTGCTGCTGCTGCTGCAGCTGTCACAACTCCTAGCTGTCACTCAAGGGAAGACGCTGGTGCTGGGGAAGGAAGGGGAATCAGCAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGGAGGGAAACCGTGGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAGATCCTGGAGTCCATCTaGACCTTATCACCTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TEGGKPWPVVEEESRRPEILESI*TLSPSL Trigger: GAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGAT...CTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | GTCCCTTTGTCCAGAGTCAGAGTCAGGTTGCCAGAACCAGCAAACTaGAGCGAGACCTGGGGTATCTTGAGGGTGAGTGGGAGCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPLSRVRVRLPEPAN*SETWGILRVSGSVS Trigger: GGAAACGCTCCCACTCACCCTCAAGATACCCCAGGTCTCGCTTCAGTTTGCTGGTTCTGGCAACCTGACTCTGACTCTGGACAAAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 90 bp | AGAAAGCCGAAGGAGCCACCCAGCACGCAAGCCAGGAACACTGTCTaGTTCACCCCTCTGGATAAAACCTGGATCCTGGAGTCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKPKEPPSTQARNTV*FTPLDKTWILESIL Trigger: CAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGACAGTGTTCCTGGCTTGCGTGCTGGGTGGCTCCTTCGGCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGGAGGGAAACCGTGGCCGGTTGTGGAAGAGGAGAGCAGAAGGCCGGAGCTAATTAATACACCTTaGCCATGCTGCCCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: TEGGKPWPVVEEESRRPELINTP*PCCPRI Trigger: GATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAG...CTCCGGCCTTCTGCTCTCCTCTTCCACAACCGGCCACGGTTTCCCTCCCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | CTGCCTTCCACATCAGCTCTCCCCACCCGTTTTCCTCTGCAAAGTTaGGTGGGAAGGAGAACTCCGCTGACTCTCCCTCACTCTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSTSALPTRFPLQS*VGRRTPLTLPHSYR Trigger: CCTATAAGAGTGAGGGAGAGTCAGCGGAGTTCTCCTTCCCACTCAACTTTGCAGAGGAAAACGGGTGGGGAGAGCTGATGTGGAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 90 bp | GGGTTAGAGACCTTAGAGTTGCTATCCAAGGTCAGGGTCAGGCTCTaGCCTTGCAACAGGCTGGTACCCGGACTGAAGGTCACTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLETLELLSKVRVRL*PCNRLVPGLKVTLN Trigger: GTTCAAAGTGACCTTCAGTCCGGGTACCAGCCTGTTGCAAGGGCAGAGCCTGACCCTGACCTTGGATAGCAACTCTAAGGTCTCTAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGGATGTGTGTTGGTGCACTGGTTAGAATGTGAGTCTGGTCTTGCAAATGGTCAGGCTCTGCCCTaGCAACAGGCTGGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WLGCVLVHWLECESGLANGQALP*QQAGTR Trigger: CCGGGTACCAGCCTGTTGCAAGGGCAGAGCCTGACC...ATTTGCAAGACCAGACTCACATTCTAACCAGTGCACCAACACACATCCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 90 bp | TTCCTCTGGTCAGAGAACTTCCAGGTGAAGACTGTGATCTTCTTCTaGGAACTCTCGCAGGGCAGTTCTGCTGATTCCCCTTCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLWSENFQVKTVIFF*ELSQGSSADSPSFP Trigger: GGGGAAGGAAGGGGAATCAGCAGAACTGCCCTGCGAGAGTTCCCAGAAGAAGATCACAGTCTTCACCTGGAAGTTCTCTGACCAGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | CCACCCGTTTTCCTCTGCAAAGTTGAGTGGGAAGGAGAACTCCGCTaGCTCTCCCTCACTCTTATAGGCCGTGATAGCTGTGCTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPVFLCKVEWEGELR*LSLTLIGRDSCALK Trigger: TTTCAGAGCACAGCTATCACGGCCTATAAGAGTGAGGGAGAGTCAGCGGAGTTCTCCTTCCCACTCAACTTTGCAGAGGAAAACGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | ACATGCTTCATGTGTGACATGCACAACCTCCCGGCCCTCCCTGCCCCACTCAGCACAACTTTACCCTTTTaGTGTTTGCACTCTGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TCFMCDMHNLPALPAPLSTTLPF*CLHSVK Trigger: CTTGACAGAGTGCAAACACAAAAAGGGTAAAGTTGT...GCTGAGTGGGGCAGGGAGGGCCGGGAGGTTGTGCATGTCACACATGAAGCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 90 bp | TCTGGTTCACCCCTCTGGATAAAACCTGGATCCTGGAGTCCATCTTaGCCTTATCACCTTCACTCAGTAGACACTGCCACAGCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSPLWIKPGSWSPS*PYHLHSVDTATALS Trigger: AGACAGGGCTGTGGCAGTGTCTACTGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | CAAAAGAGAAGCAGGCATCATGGGAAGCTGAGGCTGACTCCCGCAGCCTCTCAGTTACCCTTTTTGTGTTaGCACTCTGTCAAGGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QKRSRHHGKLRLTPAASQLPFLC*HSVKGL Trigger: TAACCCCTTGACAGAGTGCAAACACAAAAAGGGTAA...CTGAGAGGCTGCGGGAGTCAGCCTCAGCTTCCCATGATGCCTGCTTCTCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTTGTGTACACATGAGGGTCATGGTGAGACCTGGGGTATCTaGAGGGTGAGTGGGAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CVYVCVCVCVLCTHEGHGETWGI*RVSGSV Trigger: AACGCTCCCACTCACCCTCAAGATACCCCAGGTCTC...ACCATGACCCTCATGTGTACACAACACACACACACACACACACACATACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 90 bp | CTTTATGGAGAAGGAGATCCAGGGCTGGAAGAAAGAATCCTTCTCTaGCTTCCACATCAGCTCTCCCCACCCGTTTTCCTCTGCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LYGEGDPGLEERILL*LPHQLSPPVFLCKV Trigger: AACTTTGCAGAGGAAAACGGGTGGGGAGAGCTGATGTGGAAGGCAGAGAAGGATTCTTTCTTCCAGCCCTGGATCTCCTTCTCCATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 90 bp | TGTACGGACACCTCTTTGTTCTTTATGGAGAAGGAGATCCAGGGCTaGAAGAAAGAATCCTTCTCTGCCTTCCACATCAGCTCTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CTDTSLFFMEKEIQG*KKESFSAFHISSPH Trigger: GTGGGGAGAGCTGATGTGGAAGGCAGAGAAGGATTCTTTCTTCCAGCCCTGGATCTCCTTCTCCATAAAGAACAAAGAGGTGTCCGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 90 bp | ACGCAAGCCAGGAACACTGTCTGGTTCACCCCTCTGGATAAAACCTaGATCCTGGAGTCCATCTTGACCTTATCACCTTCACTCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TQARNTVWFTPLDKT*ILESILTLSPSLSR Trigger: TCTACTGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGACAGTGTTCCTGGCTTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 90 bp | AACTGCGAAGGCGAACCTCCTCTAATTAATACACCTTTGCCATGCTaGCCCAGAATCTTCCTCTGGTCAGAGAACTTCCAGGTGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NCEGEPPLINTPLPC*PRIFLWSENFQVKT Trigger: AGTCTTCACCTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCCTTCGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 90 bp | TCAAACTGCGAAGGCGAACCTCCTCTAATTAATACACCTTTGCCATaGTGCCCCAGAATCTTCCTCTGGTCAGAGAACTTCCAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNCEGEPPLINTPLP*CPRIFLWSENFQVK Trigger: CTTCACCTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCCTTCGCAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 90 bp | CCTCTAATTAATACACCTTTGCCATGCTGCCCCAGAATCTTCCTCTaGTCAGAGAACTTCCAGGTGAAGACTGTGATCTTCTTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLINTPLPCCPRIFL*SENFQVKTVIFFWE Trigger: TTCCCAGAAGAAGATCACAGTCTTCACCTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | CTCACTGAGGAGCCTCTTGATCTGAGACATTCGTGCTaGCTGGCGCTGTTGGTGCCGGCACCTGACACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTEEPLDLRHSC*LALLVPAPDTA Trigger: TGCTGTGTCAGGTGCCGGCACCAACAGCGCCAGGCAGCACGAATGTCTCAGATCAAGAGGCTCCTCAGTGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 72 bp | TGGCAGGTCTTCTTCTCACTGAGGAGCCTCTTGATCTaGGACATTCGTGCTGCCTGGCGCTGTTGGTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WQVFFSLRSLLI*DIRAAWRCWCR Trigger: CCGGCACCAACAGCGCCAGGCAGCACGAATGTCTCAGATCAAGAGGCTCCTCAGTGAGAAGAAGACCTGCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | CTTCTCACTGAGGAGCCTCTTGATCTGAGACATTCGTaGTGCCTGGCGCTGTTGGTGCCGGCACCTGACACA | + |
|
Preference number: 6 (lower is better) Translates to: LLTEEPLDLRHS*CLALLVPAPDT Trigger: TGTGTCAGGTGCCGGCACCAACAGCGCCAGGCAGCACGAATGTCTCAGATCAAGAGGCTCCTCAGTGAGAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | ACCTTAGAGTTGCTATCCAAGGTCAGGGTCAGGCTCTaGCCTTGCAACAGGCTGGTACCCGGACTGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLELLSKVRVRL*PCNRLVPGLKV Trigger: GACCTTCAGTCCGGGTACCAGCCTGTTGCAAGGGCAGAGCCTGACCCTGACCTTGGATAGCAACTCTAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | AAGGAGCCACCCAGCACGCAAGCCAGGAACACTGTCTaGTTCACCCCTCTGGATAAAACCTGGATCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KEPPSTQARNTV*FTPLDKTWILE Trigger: CTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGACAGTGTTCCTGGCTTGCGTGCTGGGTGGCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 72 bp | ACATCAGCTCTCCCCACCCGTTTTCCTCTGCAAAGTTaGGTGGGAAGGAGAACTCCGCTGACTCTCCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSALPTRFPLQS*VGRRTPLTLPH Trigger: GTGAGGGAGAGTCAGCGGAGTTCTCCTTCCCACTCAACTTTGCAGAGGAAAACGGGTGGGGAGAGCTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 72 bp | AGAGTTGCTATCCAAGGTCAGGGTCAGGCTCTGCCCTaGCAACAGGCTGGTACCCGGACTGAAGGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVAIQGQGQALP*QQAGTRTEGHF Trigger: AAAGTGACCTTCAGTCCGGGTACCAGCCTGTTGCAAGGGCAGAGCCTGACCCTGACCTTGGATAGCAACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | TGCCGAACCAGTTCTTTTTCTGGTCCAGGGTCACGGTaGAGTTCCAGAAGTCGCTGTCCTGAACCCTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRTSSFSGPGSR*SSRSRCPEPLG Trigger: ACCTAAGGGTTCAGGACAGCGACTTCTGGAACTGCACCGTGACCCTGGACCAGAAAAAGAACTGGTTCGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | GAAGGAGATCCAGGGCTGGAAGAAAGAATCCTTCTCTaGCTTCCACATCAGCTCTCCCCACCCGTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGDPGLEERILL*LPHQLSPPVFL Trigger: GAGGAAAACGGGTGGGGAGAGCTGATGTGGAAGGCAGAGAAGGATTCTTTCTTCCAGCCCTGGATCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | GATGCAGTGTCCCTTTGTCCAGAGTCAGAGTCAGGTTaGCAGAACCAGCAAACTGAAGCGAGACCTGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DAVSLCPESESG*QNQQTEARPGV Trigger: TACCCCAGGTCTCGCTTCAGTTTGCTGGTTCTGGCAACCTGACTCTGACTCTGGACAAAGGGACACTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | ATGAGATTATGGCTCTTCTGCATCCGGTGGGGGCACTaGCAGGTCTTCTTCTCACTGAGGAGCCTCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: MRLWLFCIRWGH*QVFFSLRSLLI Trigger: GATCAAGAGGCTCCTCAGTGAGAAGAAGACCTGCCAGTGCCCCCACCGGATGCAGAAGAGCCATAATCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 72 bp | CCTTGCAACAGGCTGGTACCCGGACTGAAGGTCACTTaGAACACCCACAACTCCACCTCCTCTTTCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PCNRLVPGLKVT*NTHNSTSSFLF Trigger: GAACAGGAAAGAGGAGGTGGAGTTGTGGGTGTTCAAAGTGACCTTCAGTCCGGGTACCAGCCTGTTGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 90 bp | GTCTGGTTCACCCCTCTGGATAAAACCTGGATCCTGGAGTCCATCTaGACCTTATCACCTTCACTCAGTAGACACTGCCACAGCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VWFTPLDKTWILESI*TLSPSLSRHCHSPV Trigger: GACAGGGCTGTGGCAGTGTCTACTGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 72 bp | TTCCTCTGCAAAGTTGAGTGGGAAGGAGAACTCCGCTaGCTCTCCCTCACTCTTATAGGCCGTGATAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLCKVEWEGELR*LSLTLIGRDSC Trigger: ACAGCTATCACGGCCTATAAGAGTGAGGGAGAGTCAGCGGAGTTCTCCTTCCCACTCAACTTTGCAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | TCAGAGAACTTCCAGGTGAAGACTGTGATCTTCTTCTaGGAACTCTCGCAGGGCAGTTCTGCTGATTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SENFQVKTVIFF*ELSQGSSADSP Trigger: AGGGGAATCAGCAGAACTGCCCTGCGAGAGTTCCCAGAAGAAGATCACAGTCTTCACCTGGAAGTTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 90 bp | TGGGAGCGTTTCCTTCAGCTGGAGCTTGAGGTCTTTGGTGGACTTTaGTACGGACACCTCTTTGTTCTTTATGGAGAAGGAGATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WERFLQLELEVFGGL*YGHLFVLYGEGDPG Trigger: CCCTGGATCTCCTTCTCCATAAAGAACAAAGAGGTGTCCGTACAAAAGTCCACCAAAGACCTCAAGCTCCAGCTGAAGGAAACGCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 72 bp | CCCCTCTGGATAAAACCTGGATCCTGGAGTCCATCTTaGCCTTATCACCTTCACTCAGTAGACACTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PLWIKPGSWSPS*PYHLHSVDTAT Trigger: TGTGGCAGTGTCTACTGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | GGCGAACCTCCTCTAATTAATACACCTTTGCCATGCTaGCCCAGAATCTTCCTCTGGTCAGAGAACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEPPLINTPLPC*PRIFLWSENFQ Trigger: CTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 72 bp | AACTGCGAAGGCGAACCTCCTCTAATTAATACACCTTaGCCATGCTGCCCCAGAATCTTCCTCTGGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NCEGEPPLINTP*PCCPRIFLWSE Trigger: CTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCCTTCGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 72 bp | ACCCCTCTGGATAAAACCTGGATCCTGGAGTCCATCTaGACCTTATCACCTTCACTCAGTAGACACTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPLDKTWILESI*TLSPSLSRHCH Trigger: GTGGCAGTGTCTACTGAGTGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 90 bp | TTGAGGGTGAGTGGGAGCGTTTCCTTCAGCTGGAGCTTGAGGTCTTaGGTGGACTTTTGTACGGACACCTCTTTGTTCTTTATGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRVSGSVSFSWSLRS*VDFCTDTSLFFMEK Trigger: CTTCTCCATAAAGAACAAAGAGGTGTCCGTACAAAAGTCCACCAAAGACCTCAAGCTCCAGCTGAAGGAAACGCTCCCACTCACCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS GCA 72 bp | GAAGGCGAACCTCCTCTAATTAATACACCTTTGCCATaGTGCCCCAGAATCTTCCTCTGGTCAGAGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: EGEPPLINTPLP*CPRIFLWSENF Trigger: GAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | AATACACCTTTGCCATGCTGCCCCAGAATCTTCCTCTaGTCAGAGAACTTCCAGGTGAAGACTGTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NTPLPCCPRIFL*SENFQVKTVIF Trigger: GAAGATCACAGTCTTCACCTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | AGGAACACTGTCTGGTTCACCCCTCTGGATAAAACCTaGATCCTGGAGTCCATCTTGACCTTATCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RNTVWFTPLDKT*ILESILTLSPS Trigger: TGAAGGTGATAAGGTCAAGATGGACTCCAGGATCCAGGTTTTATCCAGAGGGGTGAACCAGACAGTGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 90 bp | AAACGATCAAACTGCGAAGGCGAACCTCCTCTAATTAATACACCTTaGCCATGCTGCCCCAGAATCTTCCTCTGGTCAGAGAACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KRSNCEGEPPLINTP*PCCPRIFLWSENFQ Trigger: CTGGAAGTTCTCTGACCAGAGGAAGATTCTGGGGCAGCATGGCAAAGGTGTATTAATTAGAGGAGGTTCGCCTTCGCAGTTTGATCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CCA 72 bp | ACCTCTTTGTTCTTTATGGAGAAGGAGATCCAGGGCTaGAAGAAAGAATCCTTCTCTGCCTTCCACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSLFFMEKEIQG*KKESFSAFHIS Trigger: GCTGATGTGGAAGGCAGAGAAGGATTCTTTCTTCCAGCCCTGGATCTCCTTCTCCATAAAGAACAAAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS CAA 72 bp | TTGAGGTCTTTGGTGGACTTTTGTACGGACACCTCTTaGTTCTTTATGGAGAAGGAGATCCAGGGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSLVDFCTDTS*FFMEKEIQGWK Trigger: CTTCCAGCCCTGGATCTCCTTCTCCATAAAGAACAAAGAGGTGTCCGTACAAAAGTCCACCAAAGACCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
||
| CDS TCA 72 bp | CCCTTAGGTTGGACATGGAGAGAACTTTGGAACCACTaGCAACTTTACCCTTTTTGTGTTTGCACTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLGWTWRELWNH*QLYPFCVCTLS Trigger: TGACAGAGTGCAAACACAAAAAGGGTAAAGTTGTCAGTGGTTCCAAAGTTCTCTCCATGTCCAACCTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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| CDS CAA 72 bp | GAGAGAACTTTGGAACCACTGACAACTTTACCCTTTTaGTGTTTGCACTCTGTCAAGGGGTTAGAGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: ERTLEPLTTLPF*CLHSVKGLETL Trigger: TAAGGTCTCTAACCCCTTGACAGAGTGCAAACACAAAAAGGGTAAAGTTGTCAGTGGTTCCAAAGTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024044.7 |
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