Pregenerated sensors for CD3G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002033Ensembl transcript IDs: ENSMUST00000002101.12, ENSMUST00000160886.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTTTCTTCCTCTCTGCTTaGAGTCTACCTGTAGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NKVDKCSTSESYHWLLQAFFLSA*SLPVGL Trigger: CAACCCTACAGGTAGACTGCAAGCAGAGAGGAAGAA...AGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAGTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGAACAAGGTTGACAAGTaGTCCACTTCTGAGTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: FPVGGTLQTPHCACFPSLNKVDK*STSESY Trigger: GTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTT...CAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTACTGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGAATTTTGGGCTCTCTCCAAAATaGATTGTTTTGATTCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VGGTLQTPHCACFPSLNFGLSPK*IVLILG Trigger: ACCCAGAATCAAAACAATGCATTTTGGAGAGAGCCC...AAAATTCAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTGTTCTTCCTCTCTGCTaGCAGTCTACCTGTAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NKVDKCSTSESYHWLLQAVLPLC*QSTCRV Trigger: AACCCTACAGGTAGACTGCAAGCAGAGAGGAAGAAC...AGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR TCA 90 bp | GTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGAATTTTCATATTCCCGGTCCTTaGGGGGCTGGTACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGGTLQTPHCACFPSLNFHIPGP*GAGTAV Trigger: AACAGCTGTACCAGCCCCTCAAGGACCGGGAATATG...AAAATTCAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR TCA 90 bp | CAGTCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTTGGGCTACAGTGCCTTaGAGAAGAGAGATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTCRVENLSTGLSPKCIWATVP*RREITR Trigger: CCTGGTGATCTCTCTTCTTCAAGGCACTGTAGCCCA...AATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTTTGTCTGGGCTACAGTaGCTTGAAGAAGAGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: NKVDKCSTSESYHWLLQALSGLQ*LEEERS Trigger: TGATCTCTCTTCTTCAAGGCACTGTAGCCCAGACAA...AGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CCA 90 bp | TTTACAATTTTCCCAGTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTTGCCTCGAGGGTCTTTaGCATTGTTGCCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTIFPVGGTLQTPHCACFCLEGL*HCCPDS Trigger: GGAATCTGGGCAACAATGCCAAAGACCCTCGAGGCA...AAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTACTGGGAAAATTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CCA 90 bp | CTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTTTCTGAAGCTCTTGACTaGCGAACTCCATCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPVGLKISLLGSLQNALFSEALD*RTPSCP Trigger: GGGACAGGATGGAGTTCGCCAGTCAAGAGCTTCAGA...AAACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTTACAGCTGTTCATTTTaGAACAGAGTCTGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKVDKCSTSESYHWLLQAYSCSF*NRVCLS Trigger: AGACAAGCAGACTCTGTTGCAAAATGAACAGCTGTA...AGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTTTTATTTTATTTTCGGTCCTTGAGGGGCTaGTACAGCTGTTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPLLSHTTGSSKLLFYFRSLRG*YSCSFC Trigger: GCAAAATGAACAGCTGTACCAGCCCCTCAAGGACCG...AAAATAAAATAAAAGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR TCA 90 bp | CTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTTCATCCTGTCCCGCAATaGGATATACACCAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPVGLKISLLGSLQNALFHPVPQ*DIHQEQ Trigger: TTGCTCTTGGTGTATATCTCATTGCGGGACAGGATG...AAACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTGACAGTTCTTCCTCTCTGCTTGCAGTCTACCTGTAGGGTTGAAAATCTCTGGTTTCCTTGGAGATaGCTGTACTGGTCATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTVLPLCLQSTCRVENLWFPWR*LYWSYS Trigger: GGAATATGACCAGTACAGCCATCTCCAAGGAAACCA...GAGATTTTCAACCCTACAGGTAGACTGCAAGCAGAGAGGAAGAACTGTCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTCCACTTCTGAGTCATACCACTGGCTCCTCCAAGCTTTTATTTTATTTTTTTTGCAACAGAGTCTaGTTGTCTGAAGCTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAPLLSHTTGSSKLLFYFFCNRV*LSEALD Trigger: GTCAAGAGCTTCAGACAAGCAGACTCTGTTGCAAAA...AAAATAAAATAAAAGCTTGGAGGAGCCAGTGGTATGACTCAGAAGTGGAGCACT 41% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR GCA 90 bp | TCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTTTGTACCAAATTCTTTaGTTTATTTGTCTGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STCRVENLSTGLSPKCIVLYQIL*FICLGY Trigger: GTAGCCCAGACAAATAAAGCAAAGAATTTGGTACAA...AACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR GCA 90 bp | CTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTTCTATGTTTAGCTCAATaGAGTTTTCACACATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVGLKISLLGSLQNALFLCLAQ*SFHTFC Trigger: ACAGAATGTGTGAAAACTGCATTGAGCTAAACATAG...AAACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS TCA 90 bp | GAACCGTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTTGCTTaGAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGACCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPSPRLPSTCTKFFA*RREITRKRPARPFL Trigger: GAGGAAGGGTCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTGAGAACCCCAAACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACGTGCCTCGAGGGTCTTaGGCATTGTTGCCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRTPNKVDKCSTSESYHVPRGS*ALLPRF Trigger: GAATCTGGGCAACAATGCCAAAGACCCTCGAGGCAC...GTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTTTGGGGTTCTCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS GCA 90 bp | TACAGAACCGTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTTaGTTGAAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YRTVSSAAIHLYQIL*LKKRDHQEEASQTL Trigger: AAGGGTCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTGAGAACCCCAAACAAGGTTGACAAGTGCTCCACTTCTGAGTCATACCACCCTCAGTTGGTTTCCTaGGAGATGGCTGTACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRTPNKVDKCSTSESYHPQLVS*EMAVLV Trigger: GACCAGTACAGCCATCTCCAAGGAAACCAACTGAGG...GTGGTATGACTCAGAAGTGGAGCACTTGTCAACCTTGTTTGGGGTTCTCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS GCA 90 bp | CTTGCAGGGGGTTTGATGTCTCCTTTGCTCCTTGACACTGATACGTaGCTCGAGGGTCTTTGGCATTGTTGCCCAGATTCCATGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAGGLMSPLLLDTDT*LEGLWHCCPDSMCF Trigger: AAAACACATGGAATCTGGGCAACAATGCCAAAGACCCTCGAGGCACGTATCAGTGTCAAGGAGCAAAGGAGACATCAAACCCCCTGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGTCGGCTGCCATCCACTaGTACCAAATTCTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPVGGTLQTPHCACFPSLSAAIH*YQILCF Trigger: AAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGA...CAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTACTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGCCGTCTTTAAGCCACTaGATAGTCTTGTCAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPVGGTLQTPHCACFPSLPSLSH*IVLSVK Trigger: CTTGACTGACAAGACTATCAAGTGGCTTAAAGACGG...CAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTACTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | GTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGAATTTTGCTTGTCTGAAGCTCTaGACTGGCGAACTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGGTLQTPHCACFPSLNFACLKL*TGELHP Trigger: AGGATGGAGTTCGCCAGTCAAGAGCTTCAGACAAGC...AAAATTCAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS TCA 90 bp | ACTTGTACCAAATTCTTTGCTTTATTTGTCTGGGCTACAGTGCCTTaGAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGACCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCTKFFALFVWATVP*RREITRKRPARPFL Trigger: GAGGAAGGGTCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATTTGGTACAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS GCA 90 bp | TGTCAGTCAAGCCACAAGTCAGAAGTACAGAACCGTCTCCTCGGCTaGCATCCACTTGTACCAAATTCTTTGCTTGAAGAAGAGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CQSSHKSEVQNRLLG*HPLVPNSLLEEERS Trigger: TGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTACTTCTGACTTGTGGCTTGACTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS-3UTR CAA 90 bp | TCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTCTGGGCTACAGTGCCTaGAAGAAGAGAGATCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: STCRVENLSTGLSPKCIVLGYSA*KKRDHQ Trigger: CTGGTGATCTCTCTTCTTCAAGGCACTGTAGCCCAG...AACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | CTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTTTGCAACAGAGTCTGCTaGTCTGAAGCTCTTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVGLKISLLGSLQNALFCNRVC*SEALDW Trigger: CCAGTCAAGAGCTTCAGACAAGCAGACTCTGTTGCA...AAACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | TCTTTGACAGTTCTTCCTCTCTGCTTGCAGTCTACCTGTAGGGTTGAAAATCTCTCACTTCTTCCTCAGTaGGTTTCCTTGGAGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLTVLPLCLQSTCRVENLSLLPQ*VSLEMA Trigger: AGCCATCTCCAAGGAAACCAACTGAGGAAGAAGTGA...GAGATTTTCAACCCTACAGGTAGACTGCAAGCAGAGAGGAAGAACTGTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | TCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGTTGGTTTGATGTCTCCTTaGCTCCTTGACACTGATACG | + |
|
Preference number: 5 (lower is better) Translates to: STCRVENLSTGLSPKCIVGLMSP*LLDTDT Trigger: CGTATCAGTGTCAAGGAGCAAAGGAGACATCAAACC...AACAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | AGTCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGGTACAGCTGTTCATTTaGCAACAGAGTCTGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPVGLKISLLGSLQNALVQLFI*QQSLLV Trigger: GACAAGCAGACTCTGTTGCAAAATGAACAGCTGTAC...CAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | AGTCTACCTGTAGGGTTGAAAATCTCTCTACTGGGCTCTCTCCAAAATGCATTGAATTCTTTGCTTTATTaGTCTGGGCTACAGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPVGLKISLLGSLQNALNSLLY*SGLQCL Trigger: AAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATT...CAATGCATTTTGGAGAGAGCCCAGTAGAGAGATTTTCAACCCTACAGGTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS-3UTR CAA 90 bp | GTAGGGGGCACTCTGCAAACACCACACTGTGCTTGTTTTCCTTCACTGAATTTTCTTGTACCAAATTCTTaGCTTTATTTGTCTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VGGTLQTPHCACFPSLNFLVPNS*LYLSGL Trigger: TAGCCCAGACAAATAAAGCAAAGAATTTGGTACAAG...AAAATTCAGTGAAGGAAAACAAGCACAGTGTGGTGTTTGCAGAGTGCCCCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 90 bp | AGAACCGTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTTGCTaGAAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGACCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RTVSSAAIHLYQILC*KKRDHQEEASQTLP Trigger: AGGAAGGGTCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS CAA 90 bp | GTACAGAACCGTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTaGCTTGAAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: VQNRLLGCHPLVPNS*LEEERSPGRGQPDP Trigger: AGGGTCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS TCA 72 bp | CTTGGAGATGGCTGTACTGGTCATATTCCCGGTCCTTaGGGGGCTGGTACAGCTGTTCATTTTGCAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGDGCTGHIPGP*GAGTAVHFATE Trigger: CTCTGTTGCAAAATGAACAGCTGTACCAGCCCCTCAAGGACCGGGAATATGACCAGTACAGCCATCTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS TCA 72 bp | CCTCGGCTGCCATCCACTTGTACCAAATTCTTTGCTTaGAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRLPSTCTKFFA*RREITRKRPAR Trigger: TCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS GCA 72 bp | GGTTTGATGTCTCCTTTGCTCCTTGACACTGATACGTaGCTCGAGGGTCTTTGGCATTGTTGCCCAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLMSPLLLDTDT*LEGLWHCCPDS Trigger: GGAATCTGGGCAACAATGCCAAAGACCCTCGAGGCACGTATCAGTGTCAAGGAGCAAAGGAGACATCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||
| CDS GCA 72 bp | AGGGGCTGGTACAGCTGTTCATTTTGCAACAGAGTCTaGTTGTCTGAAGCTCTTGACTGGCGAACTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RGWYSCSFCNRV*LSEALDWRTPS Trigger: GGATGGAGTTCGCCAGTCAAGAGCTTCAGACAAGCAGACTCTGTTGCAAAATGAACAGCTGTACCAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS GCA 72 bp | GTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTTaGTTGAAGAAGAGAGATCACCAGGAAGAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSSAAIHLYQIL*LKKRDHQEEAS Trigger: GCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS CAA 72 bp | CCTTGGAGATGGCTGTACTGGTCATATTCCCGGTCCTaGAGGGGCTGGTACAGCTGTTCATTTTGCAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PWRWLYWSYSRS*RGWYSCSFCNR Trigger: TCTGTTGCAAAATGAACAGCTGTACCAGCCCCTCAAGGACCGGGAATATGACCAGTACAGCCATCTCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 72 bp | TCCTCGGCTGCCATCCACTTGTACCAAATTCTTTGCTaGAAGAAGAGAGATCACCAGGAAGAGGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAAIHLYQILC*KKRDHQEEASQ Trigger: CTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS CAA 90 bp | GCCACAAGTCAGAAGTACAGAACCGTCTCCTCGGCTGCCATCCACTaGTACCAAATTCTTTGCTTGAAGAAGAGAGATCACCAGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATSQKYRTVSSAAIH*YQILCLKKRDHQEE Trigger: CTCTTCCTGGTGATCTCTCTTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTACTTCTGACTTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS CAA 90 bp | TTTCACACATTCTGTAATACACTTGCAGGGGGTTTGATGTCTCCTTaGCTCCTTGACACTGATACGTGCCTCGAGGGTCTTTGGCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: FHTFCNTLAGGLMSP*LLDTDTCLEGLWHC Trigger: ACAATGCCAAAGACCCTCGAGGCACGTATCAGTGTCAAGGAGCAAAGGAGACATCAAACCCCCTGCAAGTGTATTACAGAATGTGTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||
| CDS GCA 72 bp | AGCCACAAGTCAGAAGTACAGAACCGTCTCCTCGGCTaGCATCCACTTGTACCAAATTCTTTGCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SHKSEVQNRLLG*HPLVPNSLLEE Trigger: TTCTTCAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTACTTCTGACTTGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160886.2 |
||
| CDS CAA 72 bp | CAAATTCTTTGCTTTATTTGTCTGGGCTACAGTGCCTaGAAGAAGAGAGATCACCAGGAAGAGGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QILCFICLGYSA*KKRDHQEEASQ Trigger: CTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 72 bp | CGTCTCCTCGGCTGCCATCCACTTGTACCAAATTCTTaGCTTTATTTGTCTGGGCTACAGTGCCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLLGCHPLVPNS*LYLSGLQCLEE Trigger: TTCTTCAAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 72 bp | CAGAAGTACAGAACCGTCTCCTCGGCTGCCATCCACTaGTACCAAATTCTTTGCTTTATTTGTCTGGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QKYRTVSSAAIH*YQILCFICLGY Trigger: GTAGCCCAGACAAATAAAGCAAAGAATTTGGTACAAGTGGATGGCAGCCGAGGAGACGGTTCTGTACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 90 bp | TTTAGAGGACTTATTATGCTCCCGTCTTTAAGCCACTTGATAGTCTaGTCAGTCAAGCCACAAGTCAGAAGTACAGAACCGTCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FRGLIMLPSLSHLIV*SVKPQVRSTEPSPR Trigger: CCGAGGAGACGGTTCTGTACTTCTGACTTGTGGCTTGACTGACAAGACTATCAAGTGGCTTAAAGACGGGAGCATAATAAGTCCTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||
| CDS TCA 72 bp | AAATTCTTTGCTTTATTTGTCTGGGCTACAGTGCCTTaGAGAAGAGAGATCACCAGGAAGAGGCCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KFFALFVWATVP*RREITRKRPAR Trigger: TCTGGCTGGCCTCTTCCTGGTGATCTCTCTTCTTCAAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 72 bp | GGCTGCCATCCACTTGTACCAAATTCTTTGCTTTATTaGTCTGGGCTACAGTGCCTTGAAGAAGAGAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GCHPLVPNSLLY*SGLQCLEEERS Trigger: TGATCTCTCTTCTTCAAGGCACTGTAGCCCAGACAAATAAAGCAAAGAATTTGGTACAAGTGGATGGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002101.12 |
||
| CDS CAA 72 bp | CTTATTATGCTCCCGTCTTTAAGCCACTTGATAGTCTaGTCAGTCAAGCCACAAGTCAGAAGTACAGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: LIMLPSLSHLIV*SVKPQVRSTEP Trigger: CGGTTCTGTACTTCTGACTTGTGGCTTGACTGACAAGACTATCAAGTGGCTTAAAGACGGGAGCATAATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||
| CDS CAA 72 bp | AGTTTTCACACATTCTGTAATACACTTGCAGGGGGTTaGATGTCTCCTTTGCTCCTTGACACTGATACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFHTFCNTLAGG*MSPLLLDTDTC Trigger: GCACGTATCAGTGTCAAGGAGCAAAGGAGACATCAAACCCCCTGCAAGTGTATTACAGAATGTGTGAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002101.12 ENSMUST00000160886.2 |
||