Pregenerated sensors for CD3EAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047649Ensembl transcript IDs: ENSMUST00000047036.10
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCCCGCAGGCTCTTTaGAGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGC | + |
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Preference number: 1 (lower is better) Translates to: MTGSLLPLPPGPQAL*STTRTLPQSASMTC Trigger: GCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCTGGGGGCAAGGGGAGAAGAGAACCTGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 90 bp | CGAAATCCACCTGCCTTTGCCTCCCGAATGCTGGGATCAAAGGCGTaGGCCACCACGCCCAGCGATGTACTAGTTTTTAGGTCCATTTCC | + |
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Preference number: 1 (lower is better) Translates to: RNPPAFASRMLGSKA*ATTPSDVLVFRSIS Trigger: GGAAATGGACCTAAAAACTAGTACATCGCTGGGCGTGGTGGCGCACGCCTTTGATCCCAGCATTCGGGAGGCAAAGGCAGGTGGATTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 90 bp | GGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCTTaGGTCAATCACCTTAGACCCGGGCTCCATTGCTTTCTGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GGSLTGLGLWFLGLS*VNHLRPGLHCFLSS Trigger: AGAGGACAGAAAGCAATGGAGCCCGGGTCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 90 bp | ATCCCTCTTTTTCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTaGTTCCTCGGATTGTCTTGGGTCAATCACCTTAGACCCGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: IPLFLLGGSLTGLGL*FLGLSWVNHLRPGL Trigger: GAGCCCGGGTCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 90 bp | TATTACGGCTCCTGTGCAAGTCTCCTCTGCTGCTTCTCCTGTCCGTaGAAGACATCTCTCATTGGGGAATGGTGTCTTGCACCTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: YYGSCASLLCCFSCP*KTSLIGEWCLAPQF Trigger: AAACTGAGGTGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGACTTGCACAGGAGCCGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 90 bp | CCTCAGTTTCCTGATCCCTCTTTTTCTTCTTGGAGGATCTTTGACTaGCCTTGGGCTCTGGTTCCTCGGATTGTCTTGGGTCAATCACCT | + |
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Preference number: 1 (lower is better) Translates to: PQFPDPSFSSWRIFD*PWALVPRIVLGQSP Trigger: AGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 90 bp | GAATGGTGTCTTGCACCTCAGTTTCCTGATCCCTCTTTTTCTTCTTaGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTC | + |
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Preference number: 1 (lower is better) Translates to: EWCLAPQFPDPSFSS*RIFDWPWALVPRIV Trigger: GACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACTGAGGTGCAAGACACCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | GGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCGTGGCTCTGCGTGTTTaGTTGGGGGAGGGGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGPATALMTGSLLPLPPGVALRV*LGEGQG Trigger: TCCCTGCCCCTCCCCCAAGCAAACACGCAGAGCCAC...GCCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | AACAGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCCTCTGCGTGTTTGCTTaGGGGAGGGGCAGGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: NRRASDSFNDRFSSPLAPLCVFA*GRGREC Trigger: ACACTCCCTGCCCCTCCCCCAAGCAAACACGCAGAG...GGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCTGTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | GGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCAACCCTTCCTCAAAGTaGCTCGATGACCTGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GGPATALMTGSLLPLPPGNPSSK*LDDLLP Trigger: TGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTT...GCCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGACTGGCCTTGGGCTCTaGTTCCTCGGATTGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RRASDSFNDRFSSPLAPRTGLGL*FLGLSW Trigger: CCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGT...CCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCATGCCCAGGCTCCAGTaGCTCTGCGTGTTTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QTGGPATALMTGSLLPLPMPRLQ*LCVFAW Trigger: CCAAGCAAACACGCAGAGCCACTGGAGCCTGGGCAT...GGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | ACCACGCCCAGCGATGTACTAGTTTTTAGGTCCATTTCCATCCACCTCCGGGCCTTTCTGACCTCAGCCTaGCGAGTCCCTCCTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TTPSDVLVFRSISIHLRAFLTSA*RVPPSP Trigger: GGGAGAAGGAGGGACTCGCCAGGCTGAGGTCAGAAA...GGCCCGGAGGTGGATGGAAATGGACCTAAAAACTAGTACATCGCTGGGCGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 90 bp | AATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCCCGCAGGCTCTTaGAAGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTG | + |
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Preference number: 2 (lower is better) Translates to: NDRFSSPLAPRPAGS*KYYTNPSSKCLDDL Trigger: CAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCTGGGGGCAAGGGGAGAAGAGAACCTGTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | GACACCCGAAGCTCCTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAACTCAGAAATCTGCCTaGCTCTGCCTGCCCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: DTRSSSARRIRGRTPFQTTQKSA*LCLPSA Trigger: AGCACTGGGCAGGCAGAGGCAGGCAGATTTCTGAGT...TGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAGGAGCTTCGGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCGCAGGCTCTTTGAAGTACTACACGAACCCTTCCTCAAAGTGCCTCGATTCGAACTCAGAAATCTaGCTGCCTCTGCCTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RPAGSLKYYTNPSSKCLDSNSEI*LPLPAQ Trigger: CTGGGCAGGCAGAGGCAGGCAGATTTCTGAGTTCGA...ATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGATAAAGAATTTTCCATaGCCAGGCTCCAGTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRASDSFNDRFSSPLAPRIKNFP*PGSSGS Trigger: AGAGCCACTGGAGCCTGGGCATGGAAAATTCTTTAT...CCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 90 bp | CTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATaGTCTTGGGTCAATCACCTTAGACCCGGGCTCCATTGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLGGSLTGLGLWFLG*SWVNHLRPGLHCFL Trigger: CAGAAAGCAATGGAGCCCGGGTCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCATCTTTGACTGGCCTTaGGCTCTGGTTCCTCGGATT | + |
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Preference number: 2 (lower is better) Translates to: STTRTLPQSASMTCCHLGIFDWP*ALVPRI Trigger: AATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGAT...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCTGCTTCTCCTGTCCGTaGAAGACATCTCTCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: STTRTLPQSASMTCCHLGCFSCP*KTSLIG Trigger: CCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCA...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR GCA 90 bp | GATGACCTGCTGCCACCTAGGCCCAGTGTCACAATAAAGAATTTTCCATGCCCATGTGCAAGTCTCCTCTaGTGCTTCTCCTGTCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: DDLLPPRPSVTIKNFPCPCASLL*CFSCPW Trigger: CCACGGACAGGAGAAGCAGCAGAGGAGACTTGCACA...TGGGCATGGAAAATTCTTTATTGTGACACTGGGCCTAGGTGGCAGCAGGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CCA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCCCCTCTTTTTCTTCTTaGAGGATCTTTGACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: STTRTLPQSASMTCCHLGPSFSS*RIFDWP Trigger: AGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGG...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 90 bp | CAAGTCTCCTCTGCTGCTTCTCCTGTCCGTGGAAGACATCTCTCATaGGGGAATGGTGTCTTGCACCTCAGTTTCCTGATCCCTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: QVSSAASPVRGRHLS*GNGVLHLSFLIPLF Trigger: AAAAAGAGGGATCAGGAAACTGAGGTGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 90 bp | TTGCACCTCAGTTTCCTGATCCCTCTTTTTCTTCTTGGAGGATCTTaGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCTTGGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LHLSFLIPLFLLGGS*TGLGLWFLGLSWVN Trigger: ATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACTGAGGTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 90 bp | GCTTCTCCTGTCCGTGGAAGACATCTCTCATTGGGGAATGGTGTCTaGCACCTCAGTTTCCTGATCCCTCTTTTTCTTCTTGGAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: ASPVRGRHLSLGNGV*HLSFLIPLFLLGGS Trigger: AGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACTGAGGTGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | CTTGCACTTCCGATCCTCCTGCCTCAGCTTCCCGAGTaGTGGGATCAAAGGTGTGCACCACCACCGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LALPILLPQLPE*WDQRCAPPPPS Trigger: GCTGGGCGGTGGTGGTGCACACCTTTGATCCCAGCACTCGGGAAGCTGAGGCAGGAGGATCGGAAGTGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR TCA 72 bp | TCTCTTCTCCCCTTGCCCCCAGGCCCGCAGGCTCTTTaGAGTACTACACGAACCCTTCCTCAAAGTGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: SLLPLPPGPQAL*STTRTLPQSAS Trigger: CGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCTGGGGGCAAGGGGAGAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | CCTGCCTTTGCCTCCCGAATGCTGGGATCAAAGGCGTaGGCCACCACGCCCAGCGATGTACTAGTTTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: PAFASRMLGSKA*ATTPSDVLVFR Trigger: CCTAAAAACTAGTACATCGCTGGGCGTGGTGGCGCACGCCTTTGATCCCAGCATTCGGGAGGCAAAGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | CCTGCCTCAGCTTCCCGAGTGCTGGGATCAAAGGTGTaGACCACCACCGCCCAGCGATGTACTAGTTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: PASASRVLGSKV*TTTAQRCTSFC Trigger: ACAAAAACTAGTACATCGCTGGGCGGTGGTGGTGCACACCTTTGATCCCAGCACTCGGGAAGCTGAGGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CAA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCCTTCTTGGAGGATCTTaGACTGGCCTTGGGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: STTRTLPQSASMTCCHLGLLGGS*TGLGLW Trigger: CCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAG...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | GGCTCTTTGAAGTACTACACGAACCCTTCCTCAAAGTaGCTCGATGACCTGCTGCCACCTAGGCCCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: GSLKYYTNPSSK*LDDLLPPRPSV Trigger: GACACTGGGCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR TCA 72 bp | TTTGAGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTaGACTCCGAAATCCACCTGCCTTTGCCTCCCGAAT | + |
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Preference number: 3 (lower is better) Translates to: FETGFLGRPGWP*TPKSTCLCLPN Trigger: ATTCGGGAGGCAAAGGCAGGTGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | CCACCTAGGCCCAGTGTCACAATAAAGAATTTTCCATaGCCAGGCTCCAGTGGCTCTGCGTGTTTGCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PPRPSVTIKNFP*PGSSGSACLLG Trigger: CCCAAGCAAACACGCAGAGCCACTGGAGCCTGGGCATGGAAAATTCTTTATTGTGACACTGGGCCTAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 72 bp | TTGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCTTaGGTCAATCACCTTAGACCCGGGCTCCATTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LTGLGLWFLGLS*VNHLRPGLHCF Trigger: AAAGCAATGGAGCCCGGGTCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR-3UTR CAA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCTTGGGGAATGGTGTCTaGCACCTCAGTTTCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: STTRTLPQSASMTCCHLGLGNGV*HLSFLI Trigger: GATCAGGAAACTGAGGTGCAAGACACCATTCCCCAA...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR GCA 72 bp | CCAGGGTGTTATTACGGCTCCTGTGCAAGTCTCCTCTaGTGCTTCTCCTGTCCGTGGAAGACATCTCTCATT | + |
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Preference number: 3 (lower is better) Translates to: PGCYYGSCASLL*CFSCPWKTSLI Trigger: AATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGACTTGCACAGGAGCCGTAATAACACCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 72 bp | TCCTGTGCAAGTCTCCTCTGCTGCTTCTCCTGTCCGTaGAAGACATCTCTCATTGGGGAATGGTGTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: SCASLLCCFSCP*KTSLIGEWCLA Trigger: TGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGACTTGCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 72 bp | CCCTCTTTTTCTTCTTGGAGGATCTTTGACTGGCCTTaGGCTCTGGTTCCTCGGATTGTCTTGGGTCAATCA | + |
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Preference number: 3 (lower is better) Translates to: PSFSSWRIFDWP*ALVPRIVLGQS Trigger: TGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 72 bp | CTTGCACCTCAGTTTCCTGATCCCTCTTTTTCTTCTTaGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LAPQFPDPSFSS*RIFDWPWALVP Trigger: AGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACTGAGGTGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CCA 72 bp | TTTCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTaGTTCCTCGGATTGTCTTGGGTCAATCACCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: FLLGGSLTGLGL*FLGLSWVNHLR Trigger: TCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | GGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCCTGAACCTGGCCCCGTaGCGGGAGGGCTGCCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GGPATALMTGSLLPLPPGLNLAP*REGCRQ Trigger: TTGGCGGCAGCCCTCCCGTCACGGGGCCAGGTTCAG...GCCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | CTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAGGCGGGCCAGCGACGGGCCGGGGCGCAGGTaGGTCTGCCACCTGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSQENKRQNPIPNRRASDGPGRR*VCHLPL Trigger: CAGAGGCAGGTGGCAGACTCACCTGCGCCCCGGCCC...GTCGCTGGCCCGCCTGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | AACAGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCCTGGCGACATCTCCGTaGAGTGGGGAGGGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NRRASDSFNDRFSSPLAPLATSP*SGEGRR Trigger: TCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAG...GGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCTGTT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | AGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGAGGCCAGCAGGGATCTaGGGTGGCAGACTTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: RRASDSFNDRFSSPLAPRRPAGI*GGRLVG Trigger: CCCTACAAGTCTGCCACCTCAGATCCCTGCTGGCCT...CCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | GGCGAGTCCCTCCTTCTCCCCTTCCCCAGGGTGTTATTACGGCTCCTGTGCAAGCCTGGGCTTCCACAATaGCCTGTGGCTGAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GESLLLPFPRVLLRLLCKPGLPQ*PVAESQ Trigger: CTGACTCTCAGCCACAGGTCATTGTGGAAGCCCAGG...CTTGCACAGGAGCCGTAATAACACCCTGGGGAAGGGGAGAAGGAGGGACTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | TTTGCTTGGGGGAGGGGCAGGGAGTGTCTATACAGCTGGTTTCTGACCTCAGCCGCTGCTGGTGGCAGATaGGACTGGCAGCTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FAWGRGRECLYSWFLTSAAAGGR*DWQLCH Trigger: GTGGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGC...GGCTGAGGTCAGAAACCAGCTGTATAGACACTCCCTGCCCCTCCCCCAAGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR GCA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCAGAACCGAGTGGCACTaGAGGCCTGGGTACCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: STTRTLPQSASMTCCHLGRTEWH*RPGYPP Trigger: TGGCGGGTACCCAGGCCTGCAGTGCCACTCGGTTCT...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR GCA 90 bp | GGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGCACTTCTTCCTCTTCTTaGTGCTGGTGGCAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGPATALMTGSLLPLPPGTSSSS*CWWQMG Trigger: TCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGT...GCCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | AGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTGAACTCCGAAATCCACCTGCCTGGGGGACAGGAGGATaGTTTCCTCCTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGFWVDQAGLELRNPPAWGTGG*FPPGLP Trigger: TGGAAGCCCAGGAGGAAACCATCCTCCTGTCCCCCA...GGCAGGTGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | CGTGTTTGCTTGGGGGAGGGGCAGGGAGTGTCTATACAGCTGGTTTCTGACCTCAGCCTCCTGAGTGTCTaGGGAGGCATCTGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVCLGEGQGVSIQLVSDLSLLSV*GGICTL Trigger: AAGGGTACAGATGCCTCCTCAGACACTCAGGAGGCT...GAGGTCAGAAACCAGCTGTATAGACACTCCCTGCCCCTCCCCCAAGCAAACACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR GCA 90 bp | AGGCGGGCCAGCGACAGCTTTAATGACAGGTTCTCTTCTCCCCTTGCCCCCAGGAAAGTCATCTGGAAGTaGAGCCTCTGTCTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRASDSFNDRFSSPLAPRKVIWK*SLCLTH Trigger: GTGGGTGAGACAGAGGCTGCACTTCCAGATGACTTT...CCTGGGGGCAAGGGGAGAAGAGAACCTGTCATTAAAGCTGTCGCTGGCCCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | TTTGCTTGGGGGAGGGGCAGGGAGTGTCTATACAGCTGGTTTCTGACCTCAGCCTCTTCTTGCTGCTGGTaGCAGATGGGACTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FAWGRGRECLYSWFLTSASSCCW*QMGLAA Trigger: AGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGA...GGCTGAGGTCAGAAACCAGCTGTATAGACACTCCCTGCCCCTCCCCCAAGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 72 bp | TTCTCTTCTCCCCTTGCCCCCAGGCCCGCAGGCTCTTaGAAGTACTACACGAACCCTTCCTCAAAGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSSPLAPRPAGS*KYYTNPSSKCL Trigger: GAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCTGGGGGCAAGGGGAGAAGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | GACACCCGAAGCTCCTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAGTACACGCCGCCCATTaGGACATTGTGGGGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSSARRIRGRTPFQTVHAAH*DIVGRS Trigger: ACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTAC...TGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAGGAGCTTCGGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | CTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAGGCGGGCCAGCGACACAATGACCTGTGGCTaGGAGTCAGCCACTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQENKRQNPIPNRRASDTMTCG*ESATIP Trigger: TGGTATAGTGGCTGACTCTCAGCCACAGGTCATTGT...GTCGCTGGCCCGCCTGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | CTGATCCCTCTTTTTCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCGGCAGGAGAACCGAGTaGCACTGCAGGCCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIPLFLLGGSLTGLGLWFGRRTE*HCRPGY Trigger: GTACCCAGGCCTGCAGTGCCACTCGGTTCTCCTGCC...GAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 72 bp | GGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATaGTCTTGGGTCAATCACCTTAGACCCGGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSLTGLGLWFLG*SWVNHLRPGLH Trigger: ATGGAGCCCGGGTCTAAGGTGATTGACCCAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTGCTGCTTCTCCTGTCCGTGGAAGACATCTCTCATTGGGGAATGGTGTCTGTGTGCTCCACCTaGGATGTCTCTGTCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLLLLSVEDISHWGMVSVCST*DVSVPL Trigger: CAAGGGGACAGAGACATCCCAGGTGGAGCACACAGA...CACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR GCA 90 bp | CTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAGGCGGGCCAGCGACGCTTCCATCTCCTCCTaGATGAAATACCTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQENKRQNPIPNRRASDASISS*MKYLFL Trigger: GAGAAAGAGGTATTTCATGCAGGAGGAGATGGAAGC...GTCGCTGGCCCGCCTGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | GATGACCTGCTGCCACCTAGGCCCAGTGTCACAATAAAGAATTTTCCATGCCCAGACATCTCCGTGAAGTaGGGAGGGCAGGAGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: DDLLPPRPSVTIKNFPCPDISVK*GGQENR Trigger: TCGGTTCTCCTGCCCTCCCCACTTCACGGAGATGTC...TGGGCATGGAAAATTCTTTATTGTGACACTGGGCCTAGGTGGCAGCAGGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTGCTGCTTCTCCTGTCCGTGGAAGACATCTCTCATTGGGGAATGGTGAGCAGGGATCTGAGGTaGCAGACTTGTAGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLLLLSVEDISHWGMVSRDLR*QTCRDQ Trigger: CTGATCCCTACAAGTCTGCCACCTCAGATCCCTGCT...CACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | TTTGCTTGGGGGAGGGGCAGGGAGTGTCTATACAGCTGGTTTCTGACCTCAGCCAGAGCTACTTCAGCCTaGAGCCCATGTTCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FAWGRGRECLYSWFLTSARATSA*SPCSEC Trigger: ACATTCAGAACATGGGCTCCAGGCTGAAGTAGCTCT...GGCTGAGGTCAGAAACCAGCTGTATAGACACTCCCTGCCCCTCCCCCAAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | TTTTTGAGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTGAACTCCGAAATCCATCAGGAGGCTCTGTTTaGGCCACAGGTTCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRQGFWVDQAGLELRNPSGGSV*ATGSVC Trigger: GCACACAGAACCTGTGGCTCAAACAGAGCCTCCTGA...TGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCTCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR GCA 90 bp | GATGACCTGCTGCCACCTAGGCCCAGTGTCACAATAAAGAATTTTCCATGCCCATTGTGGGGCGAAGTCTaGAGGGGCTTGGATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DDLLPPRPSVTIKNFPCPLWGEV*RGLDKP Trigger: TGGCTTATCCAAGCCCCTGCAGACTTCGCCCCACAA...TGGGCATGGAAAATTCTTTATTGTGACACTGGGCCTAGGTGGCAGCAGGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCTTGTCTTCCTCTTCTTGCTaGTGGTGGCAGATGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSWRIFDWPWALVPRIVLSSSSC*WWQMGL Trigger: CAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGA...CAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGAGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTGAACTCCGAAATCCACGGGCTCCATTGTCTTaGCTTCCATCTCCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLRQGFWVDQAGLELRNPRAPLS*LPSPPA Trigger: TGCAGGAGGAGATGGAAGCCAAGACAATGGAGCCCG...TGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCTCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | GACACCCGAAGCTCCTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACATCTTCCTCTTTTTGGTaGGGAACAGGAAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSSARRIRGRTPFQTSSSFW*GTGRSP Trigger: AGGGGACCTTCCTGTTCCCCACCAAAAAGAGGAAGA...TGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAGGAGCTTCGGGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | AGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCTGCCACCTAGGCTTCTCCTCTTCTTTGTaGGGGACAGGAGGATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STTRTLPQSASMTCCHLGFSSSL*GTGGWF Trigger: AAACCATCCTCCTGTCCCCCACAAAGAAGAGGAGAA...GCCTAGGTGGCAGCAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | AATAAAGAATTTTCCATGCCCAGGCTCCAGTGGCTCTGCGTGTTTGCTTGGGGGGGGCTCAAAGTCATCTaGAAGTGCAGCCTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKEFSMPRLQWLCVFAWGGLKVI*KCSLCL Trigger: GAGACAGAGGCTGCACTTCCAGATGACTTTGAGCCC...CCCCCAAGCAAACACGCAGAGCCACTGGAGCCTGGGCATGGAAAATTCTTTATT 52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | GACACCCGAAGCTCCTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACATTCCACAATGACCTGTaGCTGAGAGTCAGCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSSARRIRGRTPFQTFHNDL*LRVSHY Trigger: ATAGTGGCTGACTCTCAGCCACAGGTCATTGTGGAA...TGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAGGAGCTTCGGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 72 bp | TCTGCTGCTTCTCCTGTCCGTGGAAGACATCTCTCATaGGGGAATGGTGTCTTGCACCTCAGTTTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SAASPVRGRHLS*GNGVLHLSFLI Trigger: GATCAGGAAACTGAGGTGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | AGGCCCGCAGGCTCTTTGAAGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGAGAGAAGATATTCTTaGGGACCCTCCATGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPAGSLKYYTNPSSKCLDERRYS*GPSMIL Trigger: AAGGATCATGGAGGGTCCTCAAGAATATCTTCTCTC...ATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGCGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | AATAAAGAATTTTCCATGCCCAGGCTCCAGTGGCTCTGCGTGTTTGCTTGGGGGAAGTCTGCAGGGGCTTaGATAAGCCACAGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKEFSMPRLQWLCVFAWGKSAGA*ISHSSV Trigger: TACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTT...CCCCCAAGCAAACACGCAGAGCCACTGGAGCCTGGGCATGGAAAATTCTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR TCA 90 bp | TCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCTTGCCATCTCCTCCTGCATaGAATACCTCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSWRIFDWPWALVPRIVLPSPPA*NTSFSS Trigger: AGAAGAGAAAGAGGTATTTCATGCAGGAGGAGATGG...CAAGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 72 bp | AGTTTCCTGATCCCTCTTTTTCTTCTTGGAGGATCTTaGACTGGCCTTGGGCTCTGGTTCCTCGGATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLIPLFLLGGS*TGLGLWFLGLS Trigger: AGACAATCCGAGGAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAGGAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CCA 90 bp | GATGACCTGCTGCCACCTAGGCCCAGTGTCACAATAAAGAATTTTCCATGCCCATCTTCTTTGTCTTCTTaGGGGACACAAGAGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: DDLLPPRPSVTIKNFPCPSSLSS*GTQELL Trigger: AAGTAGCTCTTGTGTCCCCCAAGAAGACAAAGAAGA...TGGGCATGGAAAATTCTTTATTGTGACACTGGGCCTAGGTGGCAGCAGGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| 3UTR CAA 72 bp | GTCCGTGGAAGACATCTCTCATTGGGGAATGGTGTCTaGCACCTCAGTTTCCTGATCCCTCTTTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRGRHLSLGNGV*HLSFLIPLFLL Trigger: AAGAAGAAAAAGAGGGATCAGGAAACTGAGGTGCAAGACACCATTCCCCAATGAGAGATGTCTTCCACGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 90 bp | TCCCTGAAGTTGGTGACCTCAGAGCTGAGGCTGAACCTGGCCCCGTaGCGGGAGGGCTGCCGCCAAAGGCGGAGAAGCGAGGCCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLKLVTSELRLNLAP*REGCRQRRRSEAAG Trigger: GCCTGCGGCCTCGCTTCTCCGCCTTTGGCGGCAGCCCTCCCGTCACGGGGCCAGGTTCAGCCTCAGCTCTGAGGTCACCAACTTCAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 90 bp | CTGCCGCCAAAGGCGGAGAAGCGAGGCCGCAGGCCAGCAGGGATCTaGGGTGGCAGACTTGTAGGGATCAGCTGCAGGGGGACCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPKAEKRGRRPAGI*GGRLVGISCRGTRE Trigger: CTCTCGGGTCCCCCTGCAGCTGATCCCTACAAGTCTGCCACCTCAGATCCCTGCTGGCCTGCGGCCTCGCTTCTCCGCCTTTGGCGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | AAGGAGAAACGGGAGGGTTCCGAGTCTGGCGACATCTCCGTGAAGTaGGGAGGGCAGGAGAACCGAGTGGCACTGCAGGCCTGGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: KEKREGSESGDISVK*GGQENRVALQAWVP Trigger: GGGTACCCAGGCCTGCAGTGCCACTCGGTTCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAGACTCGGAACCCTCCCGTTTCTCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | TGGACCTGTAAGCGCCTCCAAGGAGAAACGGGAGGGTTCCGAGTCTaGCGACATCTCCGTGAAGTGGGGAGGGCAGGAGAACCGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WTCKRLQGETGGFRV*RHLREVGRAGEPSG Trigger: GCCACTCGGTTCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAGACTCGGAACCCTCCCGTTTCTCCTTGGAGGCGCTTACAGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS GCA 90 bp | GCTCCACCTGGGATGTCTCTGTCCCCTTGGACTTCTTCCTCTTCTTaGTGCTGGTGGCAGATGGGACTGGCAGCTCTGCCACGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: APPGMSLSPWTSSSS*CWWQMGLAALPRAP Trigger: TGGAGCCCGTGGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGTCCAAGGGGACAGAGACATCCCAGGTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | CCTGGGATGTCTCTGTCCCCTTGGACTTCTTCCTCTTCTTGCTGCTaGTGGCAGATGGGACTGGCAGCTCTGCCACGGGCTCCATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGMSLSPWTSSSSCC*WQMGLAALPRAPLS Trigger: AGACAATGGAGCCCGTGGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGTCCAAGGGGACAGAGACATCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | TGGGGCGAAGTCTGCAGGGGCTTGGATAAGCCACAGTTCTGTATCTaGACCTGTAAGCGCCTCCAAGGAGAAACGGGAGGGTTCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WGEVCRGLDKPQFCI*TCKRLQGETGGFRV Trigger: GACTCGGAACCCTCCCGTTTCTCCTTGGAGGCGCTTACAGGTCCAGATACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTTCGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CAA 90 bp | AGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTGAACTCCGAAATCCACCTGCCCTGCCACGGGCTCCATaGTCTTGGCTTCCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQGFWVDQAGLELRNPPALPRAP*SWLPSP Trigger: AGGAGATGGAAGCCAAGACAATGGAGCCCGTGGCAG...GGCAGGTGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | GGGGGACAGGAGGATGGTTTCCTCCTGGGCTTCCACAATGACCTGTaGCTGAGAGTCAGCCACTATACCATCCACTTCCTCTGTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GGQEDGFLLGFHNDL*LRVSHYTIHFLCPI Trigger: GATGGGACAGAGGAAGTGGATGGTATAGTGGCTGACTCTCAGCCACAGGTCATTGTGGAAGCCCAGGAGGAAACCATCCTCCTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGGGTGTTATTACGGCTCCTGTGCAAGTCTCCTCTGCTGCTTCTCCTGTGACTTCTTCCTCTTCTaGCTGCTGGTGGCAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGCYYGSCASLLCCFSCDFFLF*LLVADG Trigger: CCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGTC...ACAGGAGAAGCAGCAGAGGAGACTTGCACAGGAGCCGTAATAACACCCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 90 bp | TCTTTGTGGGGGACAGGAGGATGGTTTCCTCCTGGGCTTCCACAATaGCCTGTGGCTGAGAGTCAGCCACTATACCATCCACTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLWGTGGWFPPGLPQ*PVAESQPLYHPLPL Trigger: CAGAGGAAGTGGATGGTATAGTGGCTGACTCTCAGCCACAGGTCATTGTGGAAGCCCAGGAGGAAACCATCCTCCTGTCCCCCACAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTGCTGCTTCTCCTGTCCGTGGAAGACATCTCTCATTGGGGAATGGTGCTCAGGAGGCTCTGTTaGAGCCACAGGTTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLLLLLSVEDISHWGMVLRRLC*SHRFCV Trigger: CACACAGAACCTGTGGCTCAAACAGAGCCTCCTGAG...CACCATTCCCCAATGAGAGATGTCTTCCACGGACAGGAGAAGCAGCAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS GCA 90 bp | AGAAAGAGGTACACGCCGCCCATTGAGACATTGTGGGGCGAAGTCTaGAGGGGCTTGGATAAGCCACAGTTCTGTATCTGGACCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKRYTPPIETLWGEV*RGLDKPQFCIWTCK Trigger: CTTACAGGTCCAGATACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTACCTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 90 bp | TCTTCACACTCACTCCTAGGTTACCCAAGGCTGTTTTTACTTCCATaGCCCCGTGCCTGTTCACAGCCTCCTGAGTGTCTGAGGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSHSLLGYPRLFLLP*PRACSQPPECLRRH Trigger: ATGCCTCCTCAGACACTCAGGAGGCTGTGAACAGGCACGGGGCCATGGAAGTAAAAACAGCCTTGGGTAACCTAGGAGTGAGTGTGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CAA 90 bp | GACACCCGAAGCTCCTCAGCCAGGAGAATAAGAGGCAGAACCCCATTCCAAACAGAAGTCTGCAGGGGCTaGGATAAGCCACAGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DTRSSSARRIRGRTPFQTEVCRG*DKPQFC Trigger: ACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTTC...TGTTTGGAATGGGGTTCTGCCTCTTATTCTCCTGGCTGAGGAGCTTCGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGTTTCTGGGTAGACCAGGCTGGCCTTGAACTCCGAAATCCACCTGCCTTCTTCTTTGTCTTCTaGGGGGACACAAGAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: RQGFWVDQAGLELRNPPAFFFVF*GDTRAT Trigger: AGTAGCTCTTGTGTCCCCCAAGAAGACAAAGAAGAA...GGCAGGTGGATTTCGGAGTTCAAGGCCAGCCTGGTCTACCCAGAAACCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
||
| CDS-3UTR CAA 90 bp | CTGATCCCTCTTTTTCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCTGCCTCTTCCTCTTTTaGGTGGGGAACAGGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LIPLFLLGGSLTGLGLWFCLFLF*VGNRKV Trigger: GACCTTCCTGTTCCCCACCAAAAAGAGGAAGAGGCA...GAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CAA 90 bp | TCCCCAGGGTGTTATTACGGCTCCTGTGCAAGTCTCCTCTGCTGCTTCTCCTGTTTCCCTTTTTCTTCTTaGTCTTCTTGGGGGACACAA | + |
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Preference number: 5 (lower is better) Translates to: SPGCYYGSCASLLCCFSCFPFSS*SSWGTQ Trigger: TTGTGTCCCCCAAGAAGACAAAGAAGAAAAAGGGAA...ACAGGAGAAGCAGCAGAGGAGACTTGCACAGGAGCCGTAATAACACCCTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CAA 90 bp | GCAGGCTCTTTGAAGTACTACACGAACCCTTCCTCAAAGTGCCTCGATGACCTGCATCTGTACCCTTTCTaGTACTTTTCCTCTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: AGSLKYYTNPSSKCLDDLHLYPF*YFSSSL Trigger: CAGGGAAGAGGAAAAGTACAAGAAAGGGTACAGATG...CAGGTCATCGAGGCACTTTGAGGAAGGGTTCGTGTAGTACTTCAAAGAGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS-3UTR CAA 90 bp | CTGATCCCTCTTTTTCTTCTTGGAGGATCTTTGACTGGCCTTGGGCTCTGGTTCAGAGAGAAGATATTCTaGAGGACCCTCCATGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LIPLFLLGGSLTGLGLWFREKIF*RTLHDP Trigger: AGGATCATGGAGGGTCCTCAAGAATATCTTCTCTCT...GAACCAGAGCCCAAGGCCAGTCAAAGATCCTCCAAGAAGAAAAAGAGGGATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | TTGGTGACCTCAGAGCTGAGGCTGAACCTGGCCCCGTaGCGGGAGGGCTGCCGCCAAAGGCGGAGAAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LVTSELRLNLAP*REGCRQRRRSE Trigger: CTCGCTTCTCCGCCTTTGGCGGCAGCCCTCCCGTCACGGGGCCAGGTTCAGCCTCAGCTCTGAGGTCACCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | CGGGAGGGTTCCGAGTCTGGCGACATCTCCGTGAAGTaGGGAGGGCAGGAGAACCGAGTGGCACTGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: REGSESGDISVK*GGQENRVALQA Trigger: GGCCTGCAGTGCCACTCGGTTCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAGACTCGGAACCCTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | GGAGAAGCGAGGCCGCAGGCCAGCAGGGATCTGAGGTaGCAGACTTGTAGGGATCAGCTGCAGGGGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: GEARPQASRDLR*QTCRDQLQGDP Trigger: CGGGTCCCCCTGCAGCTGATCCCTACAAGTCTGCCACCTCAGATCCCTGCTGGCCTGCGGCCTCGCTTCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | AAGGCGGAGAAGCGAGGCCGCAGGCCAGCAGGGATCTaGGGTGGCAGACTTGTAGGGATCAGCTGCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: KAEKRGRRPAGI*GGRLVGISCRG Trigger: CCCCCTGCAGCTGATCCCTACAAGTCTGCCACCTCAGATCCCTGCTGGCCTGCGGCCTCGCTTCTCCGCCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | AGAAACGGGAGGGTTCCGAGTCTGGCGACATCTCCGTaGAGTGGGGAGGGCAGGAGAACCGAGTGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: RNGRVPSLATSP*SGEGRRTEWHC Trigger: GCAGTGCCACTCGGTTCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAGACTCGGAACCCTCCCGTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | TGCTCCACCTGGGATGTCTCTGTCCCCTTGGACTTCTTCCTCTTCTaGCTGCTGGTGGCAGATGGGACTGGCAGCTCTGCCACGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSTWDVSVPLDFFLF*LLVADGTGSSATGS Trigger: GGAGCCCGTGGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGTCCAAGGGGACAGAGACATCCCAGGTGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | GGACCCGAGAGAGAAGATATTCTTGAGGACCCTCCATaGTCCTTAAGCTCCCACTGGGGGCCGGGGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GPEREDILEDPP*SLSSHWGPGRR Trigger: CCTGCGCCCCGGCCCCCAGTGGGAGCTTAAGGATCATGGAGGGTCCTCAAGAATATCTTCTCTCTCGGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | AAGCGCCTCCAAGGAGAAACGGGAGGGTTCCGAGTCTaGCGACATCTCCGTGAAGTGGGGAGGGCAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: KRLQGETGGFRV*RHLREVGRAGE Trigger: TTCTCCTGCCCTCCCCACTTCACGGAGATGTCGCCAGACTCGGAACCCTCCCGTTTCTCCTTGGAGGCGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | GTGGGGAACAGGAAGGTCCCCTCAGGAGGCTCTGTTTaGGCCACAGGTTCTGTGTGCTCCACCTGGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: VGNRKVPSGGSV*ATGSVCSTWDV Trigger: GACATCCCAGGTGGAGCACACAGAACCTGTGGCTCAAACAGAGCCTCCTGAGGGGACCTTCCTGTTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | CAGCCTGGAGCCCATGTTCTGAATGTTCGGTCACCATaGGTACTCCAGGGGGCCCCATCTCTGCCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: QPGAHVLNVRSP*VLQGAPSLPPS Trigger: GGATGGAGGCAGAGATGGGGCCCCCTGGAGTACTCATGGTGACCGAACATTCAGAACATGGGCTCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | CAGTCTTGGAGCCAGAAAGAGGTACACGCCGCCCATTaGGACATTGTGGGGCGAAGTCTGCAGGGGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSWSQKEVHAAH*DIVGRSLQGLG Trigger: TCCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTACCTCTTTCTGGCTCCAAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | CTTCTTCCTCTTCTTGCTGCTGGTGGCAGATGGGACTaGCAGCTCTGCCACGGGCTCCATTGTCTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLPLLAAGGRWD*QLCHGLHCLGF Trigger: GAAGCCAAGACAATGGAGCCCGTGGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | ACAGTCTTGGAGCCAGAAAGAGGTACACGCCGCCCATaGAGACATTGTGGGGCGAAGTCTGCAGGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TVLEPERGTRRP*RHCGAKSAGAW Trigger: CCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTACCTCTTTCTGGCTCCAAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | TGGGATGTCTCTGTCCCCTTGGACTTCTTCCTCTTCTaGCTGCTGGTGGCAGATGGGACTGGCAGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: WDVSVPLDFFLF*LLVADGTGSSA Trigger: GGCAGAGCTGCCAGTCCCATCTGCCACCAGCAGCAAGAAGAGGAAGAAGTCCAAGGGGACAGAGACATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | GGACACAAGAGCTACTTCAGCCTGGAGCCCATGTTCTaGATGTTCGGTCACCATGAGTACTCCAGGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GHKSYFSLEPMF*MFGHHEYSRGP Trigger: GGGCCCCCTGGAGTACTCATGGTGACCGAACATTCAGAACATGGGCTCCAGGCTGAAGTAGCTCTTGTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | TACACGCCGCCCATTGAGACATTGTGGGGCGAAGTCTGCAGGGGCTaGGATAAGCCACAGTTCTGTATCTGGACCTGTAAGCGCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: YTPPIETLWGEVCRG*DKPQFCIWTCKRLQ Trigger: TTGGAGGCGCTTACAGGTCCAGATACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | TTGCCCTTAACAGTCTTGGAGCCAGAAAGAGGTACACGCCGCCCATaGAGACATTGTGGGGCGAAGTCTGCAGGGGCTTGGATAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPLTVLEPERGTRRP*RHCGAKSAGAWISH Trigger: GTGGCTTATCCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGGCGGCGTGTACCTCTTTCTGGCTCCAAGACTGTTAAGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS GCA 72 bp | CGGGCCTGGGGACTGCTGGTAAATACCCGGTATCGGTaGTTCTTGCCATCCAGTTTGCCCTTAACAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RAWGLLVNTRYR*FLPSSLPLTVL Trigger: CAAGACTGTTAAGGGCAAACTGGATGGCAAGAAGCACCGATACCGGGTATTTACCAGCAGTCCCCAGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | ACCCGGTATCGGTGCTTCTTGCCATCCAGTTTGCCCTTAACAGTCTaGGAGCCAGAAAGAGGTACACGCCGCCCATTGAGACATTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TRYRCFLPSSLPLTV*EPERGTRRPLRHCG Trigger: CCCACAATGTCTCAATGGGCGGCGTGTACCTCTTTCTGGCTCCAAGACTGTTAAGGGCAAACTGGATGGCAAGAAGCACCGATACCGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | CTGGTGGCAGATGGGACTGGCAGCTCTGCCACGGGCTCCATTGTCTaGGCTTCCATCTCCTCCTGCATGAAATACCTCTTTCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVADGTGSSATGSIV*ASISSCMKYLFLFF Trigger: GAAGAAGAGAAAGAGGTATTTCATGCAGGAGGAGATGGAAGCCAAGACAATGGAGCCCGTGGCAGAGCTGCCAGTCCCATCTGCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | CATGGCCCCGTGCCTGTTCACAGCCTCCTGAGTGTCTaGGGAGGCATCTGTACCCTTTCTTGTACTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: HGPVPVHSLLSV*GGICTLSCTFP Trigger: AGGAAAAGTACAAGAAAGGGTACAGATGCCTCCTCAGACACTCAGGAGGCTGTGAACAGGCACGGGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | GAGGATGGTTTCCTCCTGGGCTTCCACAATGACCTGTaGCTGAGAGTCAGCCACTATACCATCCACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: EDGFLLGFHNDL*LRVSHYTIHFL Trigger: GAGGAAGTGGATGGTATAGTGGCTGACTCTCAGCCACAGGTCATTGTGGAAGCCCAGGAGGAAACCATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | CGGTGCTTCTTGCCATCCAGTTTGCCCTTAACAGTCTaGGAGCCAGAAAGAGGTACACGCCGCCCATTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RCFLPSSLPLTV*EPERGTRRPLR Trigger: TCTCAATGGGCGGCGTGTACCTCTTTCTGGCTCCAAGACTGTTAAGGGCAAACTGGATGGCAAGAAGCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | GATGGGACTGGCAGCTCTGCCACGGGCTCCATTGTCTaGGCTTCCATCTCCTCCTGCATGAAATACCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: DGTGSSATGSIV*ASISSCMKYLF Trigger: AAAGAGGTATTTCATGCAGGAGGAGATGGAAGCCAAGACAATGGAGCCCGTGGCAGAGCTGCCAGTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 90 bp | GAAGTGCAGCCTCTGTCTCACCCACCCGCTTTCCCTTTTTCTTCTTaGTCTTCTTGGGGGACACAAGAGCTACTTCAGCCTGGAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: EVQPLSHPPAFPFSS*SSWGTQELLQPGAH Trigger: ATGGGCTCCAGGCTGAAGTAGCTCTTGTGTCCCCCAAGAAGACAAAGAAGAAAAAGGGAAAGCGGGTGGGTGAGACAGAGGCTGCACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS TCA 72 bp | TTTACTTCCATGGCCCCGTGCCTGTTCACAGCCTCCTaGGTGTCTGAGGAGGCATCTGTACCCTTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: FTSMAPCLFTAS*VSEEASVPFLV Trigger: TACAAGAAAGGGTACAGATGCCTCCTCAGACACTCAGGAGGCTGTGAACAGGCACGGGGCCATGGAAGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | CCCATTGAGACATTGTGGGGCGAAGTCTGCAGGGGCTaGGATAAGCCACAGTTCTGTATCTGGACCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PIETLWGEVCRG*DKPQFCIWTCK Trigger: CTTACAGGTCCAGATACAGAACTGTGGCTTATCCAAGCCCCTGCAGACTTCGCCCCACAATGTCTCAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | TGGGGACTGCTGGTAAATACCCGGTATCGGTGCTTCTaGCCATCCAGTTTGCCCTTAACAGTCTTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: WGLLVNTRYRCF*PSSLPLTVLEP Trigger: TGGCTCCAAGACTGTTAAGGGCAAACTGGATGGCAAGAAGCACCGATACCGGGTATTTACCAGCAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | TCACCCACCCGCTTTCCCTTTTTCTTCTTTGTCTTCTaGGGGGACACAAGAGCTACTTCAGCCTGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPTRFPFFFFVF*GDTRATSAWSP Trigger: TGGGCTCCAGGCTGAAGTAGCTCTTGTGTCCCCCAAGAAGACAAAGAAGAAAAAGGGAAAGCGGGTGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CAA 72 bp | CCTCTGTCTCACCCACCCGCTTTCCCTTTTTCTTCTTaGTCTTCTTGGGGGACACAAGAGCTACTTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLSHPPAFPFSS*SSWGTQELLQP Trigger: AGGCTGAAGTAGCTCTTGTGTCCCCCAAGAAGACAAAGAAGAAAAAGGGAAAGCGGGTGGGTGAGACAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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| CDS CCA 72 bp | TTTGTCTTCTTGGGGGACACAAGAGCTACTTCAGCCTaGAGCCCATGTTCTGAATGTTCGGTCACCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: FVFLGDTRATSA*SPCSECSVTMS Trigger: ACTCATGGTGACCGAACATTCAGAACATGGGCTCCAGGCTGAAGTAGCTCTTGTGTCCCCCAAGAAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047036.10 |
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