Pregenerated sensors for CD3E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032093Ensembl transcript IDs: ENSMUST00000102832.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTGTGGAGTCTGCAGTCTGTCCAGAGAACAAGGAGTAGCAGGGTaGTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGATGTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SCGVCSLSREQGVAG*SEGWIWVHRRRCLS Trigger: GGAGAGACATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGTTCTCTGGACAGACTGCAGACTCCACAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR TCA 90 bp | AGGAAAGGGCTTAGCTATGAGGGCCAATTAGGAGAGGAAAGGAACTaGGGCAGAGAGGACACTGGTGAGGCAGCGGGGAGCTGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RKGLSYEGQLGEERN*GREDTGEAAGSWQQ Trigger: CTGCTGCCAGCTCCCCGCTGCCTCACCAGTGTCCTCTCTGCCTCAGTTCCTTTCCTCTCCTAATTGGCCCTCATAGCTAAGCCCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR TCA 90 bp | GTGGCTGGCAGACAATCTGAGCAGCCTGATTCTTTCAAAGGCTGTTaGGTCAGCAATGTCCCAGCACTGGCTACTAGCAGAGGAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VAGRQSEQPDSFKGC*VSNVPALATSRGGR Trigger: CCTGCCTCCTCTGCTAGTAGCCAGTGCTGGGACATTGCTGACTCAACAGCCTTTGAAAGAATCAGGCTGCTCAGATTGTCTGCCAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGGCAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGATGGGCCGGGAACAGAGAGGACACTGGTaGGGCAGCGGGGAGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KGAGRRYGVCNSRRMGREQRGHW*GSGELA Trigger: TGCCAGCTCCCCGCTGCCTCACCAGTGTCCTCTCTG...TTCCCGGCCCATCCTCCGACTGTTACACACCCCATACCTCCTCCCTGCCCCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTAGAGACAAGGGGGCAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGCAAGGAGTAGCAGGGTaGTCGGAGGGCTGGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRRDKGAGRRYGVCNSRRQGVAG*SEGWIW Trigger: CCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTG...CCTCCGACTGTTACACACCCCATACCTCCTCCCTGCCCCCTTGTCTCTACGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGTTCACCAGGAGGCTGAAGAGCAAGCTGTGGAGTCTGCAGTCTGTCCAGGGTGCTCGGAGGGCTaGATCTGGGTCCACAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TRVHQEAEEQAVESAVCPGCSEG*IWVHRR Trigger: CCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCC...TGGACAGACTGCAGACTCCACAGCTTGCTCTTCAGCCTCCTGGTGAACACGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR TCA 90 bp | CCATCCGAGGATCTAAGGGGAAATCTGGAGAGGCACCTGTGGCAGGGGCTGGGCCAGGACCTGTGCCAATaGTTACAGAATCCATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSEDLRGNLERHLWQGLGQDLCQ*LQNPSQ Trigger: CTGGGATGGATTCTGTAATCATTGGCACAGGTCCTG...GCCCAGCCCCTGCCACAGGTGCCTCTCCAGATTTCCCCTTAGATCCTCGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTAGAGACAAGGGGGCAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGGCAAGCTGTGGAGTCTaGAGTCTGTCCAGAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SRRDKGAGRRYGVCNSRRASCGV*SLSREQ Trigger: TTGTTCTCTGGACAGACTGCAGACTCCACAGCTTGC...CCTCCGACTGTTACACACCCCATACCTCCTCCCTGCCCCCTTGTCTCTACGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGTGTGTAACAGTCGGAGGATGGGCCGGGAAGGGAATAAAATCTGGAGTGGGAGAGGAAAGGAACTaGGGCAGAGAGGACACTGGT | + |
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Preference number: 2 (lower is better) Translates to: MGCVTVGGWAGKGIKSGVGEERN*GREDTG Trigger: ACCAGTGTCCTCTCTGCCTCAGTTCCTTTCCTCTCC...CACTCCAGATTTTATTCCCTTCCCGGCCCATCCTCCGACTGTTACACACCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGGGCTGGTGTATTCATGGAGATGGAGATGACCATCCGAGGATCTAAGTCGGAGGGCTGGATCTaGGTCCACAGAAGGCGATGT | + |
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Preference number: 2 (lower is better) Translates to: REGAGVFMEMEMTIRGSKSEGWI*VHRRRC Trigger: ACATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGA...CTTAGATCCTCGGATGGTCATCTCCATCTCCATGAATACACCAGCCCCCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCAGCCTGATTCTTTCAAAGGCTGTTGAGTCAGCAATGTCCCAGCACTGGTGTTCACCAGGAGGCTaGAGAGCAAGCTGTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSSLILSKAVESAMSQHWCSPGG*RASCGV Trigger: GACTCCACAGCTTGCTCTTCAGCCTCCTGGTGAACA...CCAGTGCTGGGACATTGCTGACTCAACAGCCTTTGAAAGAATCAGGCTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR CCA 90 bp | CAATACACTTTATTGCCTTTTGCATTAGCAGAGAGGGGGCTGGTGTATTCATGGGCAATGTCCCAGCACTaGCTACTAGCAGAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QYTLLPFALAERGLVYSWAMSQH*LLAEEA Trigger: TGCCTCCTCTGCTAGTAGCCAGTGCTGGGACATTGC...CCATGAATACACCAGCCCCCTCTCTGCTAATGCAAAAGGCAATAAAGTGTATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR CCA 90 bp | CAATACACTTTATTGCCTTTTGCATTAGCAGAGAGGGGGCTGGTGTATTCATGGACCTGTGGCAGGGGCTaGGCCAGGATCTATAAATGG | + |
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Preference number: 2 (lower is better) Translates to: QYTLLPFALAERGLVYSWTCGRG*ARIYKW Trigger: CCATTTATAGATCCTGGCCCAGCCCCTGCCACAGGT...CCATGAATACACCAGCCCCCTCTCTGCTAATGCAAAAGGCAATAAAGTGTATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR TCA 90 bp | CAATACACTTTATTGCCTTTTGCATTAGCAGAGAGGGGGCTGGTGTATTCATGGTCTTTCAAAGGCTGTTaGGTCAGCAATGTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QYTLLPFALAERGLVYSWSFKGC*VSNVPA Trigger: TGCTGGGACATTGCTGACTCAACAGCCTTTGAAAGA...CCATGAATACACCAGCCCCCTCTCTGCTAATGCAAAAGGCAATAAAGTGTATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR GCA 72 bp | GTCTGCAGTCTGTCCAGAGAACAAGGAGTAGCAGGGTaGTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: VCSLSREQGVAG*SEGWIWVHRRR Trigger: TCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGTTCTCTGGACAGACTGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR CCA 72 bp | TCCAGAGAACAAGGAGTAGCAGGGTGCTCGGAGGGCTaGATCTGGGTCCACAGAAGGCGATGTCTCTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: SREQGVAGCSEG*IWVHRRRCLSY Trigger: ATAGGAGAGACATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGTTCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR CCA 72 bp | CAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGATaGGCCGGGAAGGGAATAAAATCTGGAGTGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: QGGGMGCVTVGG*AGKGIKSGVFK Trigger: TTTAAACACTCCAGATTTTATTCCCTTCCCGGCCCATCCTCCGACTGTTACACACCCCATACCTCCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR TCA 72 bp | AGACAATCTGAGCAGCCTGATTCTTTCAAAGGCTGTTaGGTCAGCAATGTCCCAGCACTGGCTACTAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RQSEQPDSFKGC*VSNVPALATSR Trigger: TCTGCTAGTAGCCAGTGCTGGGACATTGCTGACTCAACAGCCTTTGAAAGAATCAGGCTGCTCAGATTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCAGGATCTATAAATGGGGCAGGACCTGTGCCAATGATTACAGAATCCATTTCTTTCAAAGGCTGTaGAGTCAGCAATGTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: WARIYKWGRTCANDYRIHFFQRL*SQQCPS Trigger: GCTGGGACATTGCTGACTCAACAGCCTTTGAAAGAA...ATGGATTCTGTAATCATTGGCACAGGTCCTGCCCCATTTATAGATCCTGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR GCA 90 bp | AAGGGGGCAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGATGGGCCGGGAAGGTCCCGCTGGCCTTTaGGGATGGGCTCATAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KGAGRRYGVCNSRRMGREGPAGL*GWAHSL Trigger: CAGACTATGAGCCCATCCGCAAAGGCCAGCGGGACC...TTCCCGGCCCATCCTCCGACTGTTACACACCCCATACCTCCTCCCTGCCCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | ATCCGAGGATCTAAGGGGAAATCTGGAGAGGCACCTGTGGCAGGGGCTGGGCCAGCTCATAGTCTGGGTTaGGAACAGGTGGTGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: IRGSKGKSGEAPVAGAGPAHSLG*EQVVAA Trigger: AGCGGCCACCACCTGTTCCCAACCCAGACTATGAGC...TGGCCCAGCCCCTGCCACAGGTGCCTCTCCAGATTTCCCCTTAGATCCTCGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | CCATCCGAGGATCTAAGGGGAAATCTGGAGAGGCACCTGTGGCAGGGGCTGGGCTCACAGGCTTGGCCTTaGCCTTCCTATTCTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSEDLRGNLERHLWQGLGSQAWP*PSYSCS Trigger: GGAGCAAGAATAGGAAGGCCAAGGCCAAGCCTGTGA...GCCCAGCCCCTGCCACAGGTGCCTCTCCAGATTTCCCCTTAGATCCTCGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | TCTCGTAGAGACAAGGGGGCAGGGAGGAGGTATGGGGTGTGTAACAGTCGGAGGGTTGGGAACAGGTGGTaGCCGCTCCTTGTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRRDKGAGRRYGVCNSRRVGNRW*PLLVLP Trigger: GGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAAC...CCTCCGACTGTTACACACCCCATACCTCCTCCCTGCCCCCTTGTCTCTACGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | ACAAGGAGTAGCAGGGTGCTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGATGTGGGTTGGGAACAGGTaGTGGCCGCTCCTTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TRSSRVLGGLDLGPQKAMWVGNR*WPLLVL Trigger: CAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCA...CATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | AGGGTGCTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGATGTCTCTCCTATCTGAATACAGGTCCCGCTaGCCTTTGCGGATGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RVLGGLDLGPQKAMSLLSEYRSR*PLRMGS Trigger: TGAGCCCATCCGCAAAGGCCAGCGGGACCTGTATTC...AGATAGGAGAGACATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR TCA 90 bp | ACAAGGAGTAGCAGGGTGCTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGATGTGCTCCAGTAATAAATaGCCATCAGCAAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TRSSRVLGGLDLGPQKAMCSSNK*PSASPE Trigger: CTCTGGGCTTGCTGATGGTCATTTATTACTGGAGCA...CATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | ACACGTGTTCACCAGGAGGCTGAAGAGCAAGCTGTGGAGTCTGCAGTCTGTCCACTCGGGTCACAGGCTTaGCCTTGGCCTTCCTATTCT | + |
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Preference number: 4 (lower is better) Translates to: TRVHQEAEEQAVESAVCPLGSQA*PWPSYS Trigger: AGAATAGGAAGGCCAAGGCCAAGCCTGTGACCCGAG...TGGACAGACTGCAGACTCCACAGCTTGCTCTTCAGCCTCCTGGTGAACACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGCAGTCTGTCCAGAGAACAAGGAGTAGCAGGGTGCTCGGAGGGCTGGATACGTCAACTCTACACTaGTTCCTGAGATGGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: SLQSVQRTRSSRVLGGLDTSTLH*FLRWRL Trigger: AAGTCTCCATCTCAGGAACCAGTGTAGAGTTGACGT...ATCCAGCCCTCCGAGCACCCTGCTACTCCTTGTTCTCTGGACAGACTGCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR GCA 90 bp | CAATACACTTTATTGCCTTTTGCATTAGCAGAGAGGGGGCTGGTGTATTCATGGTTTGCCCTCTGGGCCTaGTACCAGCACCGGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QYTLLPFALAERGLVYSWFALWA*YQHRFL Trigger: GAGGAACCGGTGCTGGTAGCAGGCCCAGAGGGCAAA...CCATGAATACACCAGCCCCCTCTCTGCTAATGCAAAAGGCAATAAAGTGTATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGGGCTGGTGTATTCATGGAGATGGAGATGACCATCCGAGGATCTAAGTGCTTATCATGCTTCTaGGGCAGCTCTTGGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: REGAGVFMEMEMTIRGSKCLSCF*GSSWPF Trigger: AAATGGCCAAGAGCTGCCTCAGAAGCATGATAAGCA...CTTAGATCCTCGGATGGTCATCTCCATCTCCATGAATACACCAGCCCCCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 90 bp | CCGCTGGCCTTTGCGGATGGGCTCATAGTCTGGGTTGGGAACAGGTaGTGGCCGCTCCTTGTTTTGCCCTCTGGGCCTGCTACCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: PLAFADGLIVWVGNR*WPLLVLPSGPATST Trigger: GGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCCATCCGCAAAGGCCAGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 90 bp | CTGGCCTTTGCGGATGGGCTCATAGTCTGGGTTGGGAACAGGTGGTaGCCGCTCCTTGTTTTGCCCTCTGGGCCTGCTACCAGCACCGGT | + |
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Preference number: 5 (lower is better) Translates to: LAFADGLIVWVGNRW*PLLVLPSGPATSTG Trigger: ACCGGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCCATCCGCAAAGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CAA 90 bp | CTGAGCAGCCTGATTCTTTCAAAGGCTGTTGAGTCAGCAATGTCCCAGCACTGGGGTGGTGGCCGCTCCTaGTTTTGCCCTCTGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LSSLILSKAVESAMSQHWGGGRS*FCPLGL Trigger: CAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACC...CCAGTGCTGGGACATTGCTGACTCAACAGCCTTTGAAAGAATCAGGCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CAA 90 bp | AGTCTGCAGTCTGTCCAGAGAACAAGGAGTAGCAGGGTGCTCGGAGGGCTGGATGTCACAGGCTTGGCCTaGGCCTTCCTATTCTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLQSVQRTRSSRVLGGLDVTGLA*AFLFLL Trigger: GAGCAAGAATAGGAAGGCCAAGGCCAAGCCTGTGAC...ATCCAGCCCTCCGAGCACCCTGCTACTCCTTGTTCTCTGGACAGACTGCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CAA 90 bp | ATGGGGTGTGTAACAGTCGGAGGATGGGCCGGGAAGGGAATAAAATCTGGAGTGCCTCGGGTCACAGGCTaGGCCTTGGCCTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: MGCVTVGGWAGKGIKSGVPRVTG*ALAFLF Trigger: GAATAGGAAGGCCAAGGCCAAGCCTGTGACCCGAGG...CACTCCAGATTTTATTCCCTTCCCGGCCCATCCTCCGACTGTTACACACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGTAGCAGGGTGCTCGGAGGGCTGGATCTGGGTCCACAGAAGGCGATGAGTACGTGTTTTTATTaGAGGCTGGTGTGTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: TRSSRVLGGLDLGPQKAMSTCFY*RLVCSR Trigger: TCTGCTACACACCAGCCTCAAATAAAAACACGTACT...CATCGCCTTCTGTGGACCCAGATCCAGCCCTCCGAGCACCCTGCTACTCCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGGGCTGGTGTATTCATGGAGATGGAGATGACCATCCGAGGATCTAAGCCTGAGATGGAGACTTaGTATTCAATGTTCTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: REGAGVFMEMEMTIRGSKPEMET*YSMFSA Trigger: TGCCGAGAACATTGAATACAAAGTCTCCATCTCAGG...CTTAGATCCTCGGATGGTCATCTCCATCTCCATGAATACACCAGCCCCCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS TCA 90 bp | GTACTCACACACTCGAGCTTTCAGGTACAAGTACGTGTTTTTATTTaGGGCTGGTGTGTAGCAGACGTAGTAGCCACTGTCCTCGACTTC | + |
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Preference number: 5 (lower is better) Translates to: VLTHSSFQVQVRVFI*GWCVADVVATVLDF Trigger: GAAGTCGAGGACAGTGGCTACTACGTCTGCTACACACCAGCCTCAAATAAAAACACGTACTTGTACCTGAAAGCTCGAGTGTGTGAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 90 bp | ATTTTAAGTTCTCGTCACTGTCTAGAGGGCACGTCAACTCTACACTaGTTCCTGAGATGGAGACTTTGTATTCAATGTTCTCGGCATCGT | + |
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Preference number: 5 (lower is better) Translates to: ILSSRHCLEGTSTLH*FLRWRLCIQCSRHR Trigger: ACGATGCCGAGAACATTGAATACAAAGTCTCCATCTCAGGAACCAGTGTAGAGTTGACGTGCCCTCTAGACAGTGACGAGAACTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS GCA 72 bp | TCTGGGTTGGGAACAGGTGGTGGCCGCTCCTTGTTTTaGCCTCTGGGCCTGCTACCAGCACCGGTTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SGLGTGGGRSLF*PLGLLPAPVPR Trigger: CCGAGGAACCGGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | TGGGAACAGGTGGTGGCCGCTCCTTGTTTTGCCCTCTaGGCCTGCTACCAGCACCGGTTCCTCGGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: WEQVVAAPCFAL*ACYQHRFLGSQ Trigger: CTGTGACCCGAGGAACCGGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CAA 72 bp | GTCTGGGTTGGGAACAGGTGGTGGCCGCTCCTTGTTTaGCCCTCTGGGCCTGCTACCAGCACCGGTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VWVGNRWWPLLV*PSGPATSTGSS Trigger: CGAGGAACCGGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CAA 90 bp | GGGCTCATAGTCTGGGTTGGGAACAGGTGGTGGCCGCTCCTTGTTTaGCCCTCTGGGCCTGCTACCAGCACCGGTTCCTCGGGTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: GLIVWVGNRWWPLLV*PSGPATSTGSSGHR Trigger: CCTGTGACCCGAGGAACCGGTGCTGGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | GCGGATGGGCTCATAGTCTGGGTTGGGAACAGGTGGTaGCCGCTCCTTGTTTTGCCCTCTGGGCCTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: ADGLIVWVGNRW*PLLVLPSGPAT Trigger: GGTAGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCCATCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | CCCGCTGGCCTTTGCGGATGGGCTCATAGTCTGGGTTaGGAACAGGTGGTGGCCGCTCCTTGTTTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PAGLCGWAHSLG*EQVVAAPCFAL Trigger: GAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCCATCCGCAAAGGCCAGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | TTTGCGGATGGGCTCATAGTCTGGGTTGGGAACAGGTaGTGGCCGCTCCTTGTTTTGCCCTCTGGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FADGLIVWVGNR*WPLLVLPSGPA Trigger: AGCAGGCCCAGAGGGCAAAACAAGGAGCGGCCACCACCTGTTCCCAACCCAGACTATGAGCCCATCCGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | GCCTGCTACCAGCACCGGTTCCTCGGGTCACAGGCTTaGCCTTGGCCTTCCTATTCTTGCTCCAGTAATAAA | + |
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Preference number: 6 (lower is better) Translates to: ACYQHRFLGSQA*PWPSYSCSSNK Trigger: TTTATTACTGGAGCAAGAATAGGAAGGCCAAGGCCAAGCCTGTGACCCGAGGAACCGGTGCTGGTAGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CCA 72 bp | ATGGAGACTTTGTATTCAATGTTCTCGGCATCGTCCTaGCAAGTGCCAACAGCTAGGAGGCTGAGGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: METLYSMFSASS*QVPTARRLRHR Trigger: CCTGTGCCTCAGCCTCCTAGCTGTTGGCACTTGCCAGGACGATGCCGAGAACATTGAATACAAAGTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CAA 90 bp | AGTACTCACACACTCGAGCTTTCAGGTACAAGTACGTGTTTTTATTaGAGGCTGGTGTGTAGCAGACGTAGTAGCCACTGTCCTCGACTT | + |
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Preference number: 6 (lower is better) Translates to: STHTLELSGTSTCFY*RLVCSRRSSHCPRL Trigger: AAGTCGAGGACAGTGGCTACTACGTCTGCTACACACCAGCCTCAAATAAAAACACGTACTTGTACCTGAAAGCTCGAGTGTGTGAGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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| CDS CAA 72 bp | ACACTCGAGCTTTCAGGTACAAGTACGTGTTTTTATTaGAGGCTGGTGTGTAGCAGACGTAGTAGCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: TLELSGTSTCFY*RLVCSRRSSHC Trigger: ACAGTGGCTACTACGTCTGCTACACACCAGCCTCAAATAAAAACACGTACTTGTACCTGAAAGCTCGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102832.3 |
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