Pregenerated sensors for CD38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029084Ensembl transcript IDs: ENSMUST00000030964.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTCTTCCATCTCTGGTGTTAACACTGTAGTAGAGGCTTCTCCCTaGCAGTTTCAGCTTTCCACCAGTGTTGCTTCTGAGCCCCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SSSISGVNTVVEASP*QFQLSTSVASEPLH Trigger: ATGAAGGGGCTCAGAAGCAACACTGGTGGAAAGCTGAAACTGTCAGGGAGAAGCCTCTACTACAGTGTTAACACCAGAGATGGAAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR CCA 90 bp | TACCATGACCAAAGCAAGTCTTTTATAAGGACAACAAATTGGGGCTaGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: YHDQSKSFIRTTNWG*LTGSEVQSIIIKVG Trigger: TCCCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTTGTTGTCCTTATAAAAGACTTGCTTTGGTCATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR CCA 90 bp | AACAGATACCATGACCAAAGCAAGTCTTTTATAAGGACAACAAATTaGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAG | + |
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Preference number: 1 (lower is better) Translates to: NRYHDQSKSFIRTTN*GWLTGSEVQSIIIK Trigger: CTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTTGTTGTCCTTATAAAAGACTTGCTTTGGTCATGGTATCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR TCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACGTAGAGGCTTCTCCCTaGCAGTTTCAGCTTTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SNPATHWVKHIQTIKVTNVEASP*QFQLST Trigger: GGTGGAAAGCTGAAACTGTCAGGGAGAAGCCTCTAC...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTGGAATAGTGGCCTCCAGGGCACCAAGAATGAAGTaGAAGAGAAAGAGGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LRVLYFHLKAVSGIVASRAPRMK*KRKRVQ Trigger: TTGCACCCTCTTTCTCTTCCACTTCATTCTTGGTGC...CCTGGAGGCCACTATTCCACTAACAGCCTTCAAATGAAAATATAAAACTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR TCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACCCTATAATGACCCTATaGCCTCAGGTTTACCATGTG | + |
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Preference number: 2 (lower is better) Translates to: SNPATHWVKHIQTIKVTNPIMTL*PQVYHV Trigger: CACATGGTAAACCTGAGGTCATAGGGTCATTATAGG...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR TCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACCTCAGGTTTACCATGTaGATATCTGTGGGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SNPATHWVKHIQTIKVTNLRFTM*ISVGRM Trigger: CATTCTTCCCACAGATATTCACATGGTAAACCTGAG...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAACTTATCCACCATGTATaGAAGTTCTCAGGTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKLIHHV*KFSGWI Trigger: AATCCAACCTGAGAACTTTCATACATGGTGGATAAG...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR TCA 72 bp | TCCCTGACAGTTTCAGCTTTCCACCAGTGTTGCTTCTaGGCCCCTTCATCTCAGTCCAGGCTACAGGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SLTVSAFHQCCF*APSSQSRLQVI Trigger: GATCACCTGTAGCCTGGACTGAGATGAAGGGGCTCAGAAGCAACACTGGTGGAAAGCTGAAACTGTCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR CAA 90 bp | ATACCTTCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAAGCTTTCCACCAGTGTaGCTTCTGAGCCCCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: IPSNPATHWVKHIQTIKVSFPPV*LLSPFI Trigger: GATGAAGGGGCTCAGAAGCAACACTGGTGGAAAGCT...TACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGAAGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR TCA 72 bp | TGTATGAAAGTTCTCAGGTTGGATTCTCAGCCTCATTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CMKVLRLDSQPH*EREREREREKR Trigger: TCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATGAGGCTGAGAATCCAACCTGAGAACTTTCATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR CCA 72 bp | TCCAGCAAGGCCATACCTTCTAATCCTGCCACTCACTaGGTCAAGCATATACAAACTATCAAAGTAACTAAC | + |
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Preference number: 3 (lower is better) Translates to: SSKAIPSNPATH*VKHIQTIKVTN Trigger: GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGAAGGTATGGCCTTGCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR TCA 72 bp | TTTAGCTCAGTGGTATATAGGCTTATCCACCATGTATaGAAGTTCTCAGGTTGGATTCTCAGCCTCATTGAG | + |
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Preference number: 3 (lower is better) Translates to: FSSVVYRLIHHV*KFSGWILSLIE Trigger: CTCAATGAGGCTGAGAATCCAACCTGAGAACTTTCATACATGGTGGATAAGCCTATATACCACTGAGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR CCA 72 bp | CAAAGCAAGTCTTTTATAAGGACAACAAATTGGGGCTaGCTTACAGGTTCAGAGGTTCAGTCCATTATCATC | + |
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Preference number: 3 (lower is better) Translates to: QSKSFIRTTNWG*LTGSEVQSIII Trigger: GATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTTGTTGTCCTTATAAAAGACTTGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR CAA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACTGTCTAATGGGAAGTTaGATTGGCCATTTTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SNPATHWVKHIQTIKVTNCLMGS*IGHFSA Trigger: TGCTGAAAAATGGCCAATCAAACTTCCCATTAGACA...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR-3UTR CAA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAACAGGCTACTACCAATTaGGCAATAAAAGCTCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKQATTN*AIKARK Trigger: TTTCCGAGCTTTTATTGCCAAATTGGTAGTAGCCTG...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR TCA 72 bp | TATATTGTTCAACAATCACAAACTGGTGTCAAAACATaGATACAGAAGCACCTGGCTCTGTTTATGCTATTT | + |
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Preference number: 3 (lower is better) Translates to: YIVQQSQTGVKT*IQKHLALFMLF Trigger: AAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCATGTTTTGACACCAGTTTGTGATTGTTGAACAATATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | CTCCCTGACAGTTTCAGCTTTCCACCAGTGTTGCTTCTGAGCCCCTTCATCTCACCATTGAGCATCACTTaGACCACACCACAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LPDSFSFPPVLLLSPFISPLSIT*TTPQAS Trigger: AGATGCCTGTGGTGTGGTCCAAGTGATGCTCAATGG...TGAGATGAAGGGGCTCAGAAGCAACACTGGTGGAAAGCTGAAACTGTCAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | CCACCAGTGTTGCTTCTGAGCCCCTTCATCTCAGTCCAGGCTACAGGTGATCTAATTAAGTCTACACGATaGGTGCTCAGGGTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PPVLLLSPFISVQATGDLIKSTR*VLRVLH Trigger: GTGAAGAACCCTGAGCACCCATCGTGTAGACTTAAT...TAGATCACCTGTAGCCTGGACTGAGATGAAGGGGCTCAGAAGCAACACTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR TCA 90 bp | CTCCCTGACAGTTTCAGCTTTCCACCAGTGTTGCTTCTGAGCCCCTTCATCTCACAGGCCTGTAGTTTATaGACCTTATTTGGGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LPDSFSFPPVLLLSPFISQACSL*TLFGSK Trigger: TTTGGACCCAAATAAGGTTCATAAACTACAGGCCTG...TGAGATGAAGGGGCTCAGAAGCAACACTGGTGGAAAGCTGAAACTGTCAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR GCA 90 bp | CCACCAGTGTTGCTTCTGAGCCCCTTCATCTCAGTCCAGGCTACAGGTGATCTAATCATATTCCTTTTCTaGACAATCATCTTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PPVLLLSPFISVQATGDLIIFLF*TIIFSS Trigger: TGAGCTGAAGATGATTGTGCAGAAAAGGAATATGAT...TAGATCACCTGTAGCCTGGACTGAGATGAAGGGGCTCAGAAGCAACACTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR GCA 90 bp | GGCATGGCACAGGCAGAGCTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTAGTCTACACGATGGGTaGTCAGGGTTCTTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: GMAQAELRVLYFHLKAVSSLHDG*SGFFTH Trigger: GTGTGTGAAGAACCCTGAGCACCCATCGTGTAGACT...ACTAACAGCCTTCAAATGAAAATATAAAACTCTCAGCTCTGCCTGTGCCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| 3UTR CAA 72 bp | ATGGCACAGGCAGAGCTGAGAGTTTTATATTTTCATTaGAAGGCTGTTAGTGGAATAGTGGCCTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: MAQAELRVLYFH*KAVSGIVASRQ Trigger: CTGCCTGGAGGCCACTATTCCACTAACAGCCTTCAAATGAAAATATAAAACTCTCAGCTCTGCCTGTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR TCA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAAGGGTGTCCTCCAGGGTaGACATCTTTCCCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKGCPPG*TSFPGS Trigger: GGATCCAGGGAAAGATGTTCACCCTGGAGGACACCC...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGCACAGGCAGAGCTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTGCTGTTTTTGTAAAATaGCTCACGGAGGGACCCATT | + |
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Preference number: 4 (lower is better) Translates to: GMAQAELRVLYFHLKAVSAVFVK*LTEGPI Trigger: AATGGGTCCCTCCGTGAGCCATTTTACAAAAACAGC...ACTAACAGCCTTCAAATGAAAATATAAAACTCTCAGCTCTGCCTGTGCCATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTGGAATAGTGGCCTCCAGGCACACTGAAGAAACCTaGCAGGCCTGTAGTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: LRVLYFHLKAVSGIVASRHTEET*QACSYP Trigger: TGGATAACTACAGGCCTGCCAGGTTTCTTCAGTGTG...CCTGGAGGCCACTATTCCACTAACAGCCTTCAAATGAAAATATAAAACTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACGATGGGCCAGGTGTTTaGATTTGCTCCAAAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SNPATHWVKHIQTIKVTNDGPGV*ICSKRE Trigger: CTCTCTTTTGGAGCAAATCCAAACACCTGGCCCATC...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGCACAGGCAGAGCTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTGAGAGTCTTGTTACATaGTATGGTTTGAGTGACCAA | + |
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Preference number: 4 (lower is better) Translates to: GMAQAELRVLYFHLKAVSESLVT*YGLSDQ Trigger: TTGGTCACTCAAACCATACCATGTAACAAGACTCTC...ACTAACAGCCTTCAAATGAAAATATAAAACTCTCAGCTCTGCCTGTGCCATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR TCA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAACGTAGTCTTCTCTTGTaGTGTTGCAAGGGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKRSLLL*CCKGSW Trigger: CCAAGAACCCTTGCAACATCACAAGAGAAGACTACG...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR GCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACACCACAGGCATCTTCTaGAAACTTTTGGGAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: SNPATHWVKHIQTIKVTNTTGIF*KLLGNH Trigger: GTGATTTCCCAAAAGTTTGCAGAAGATGCCTGTGGT...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTGGAATAGTGGCCTCCAGGCCACACTTCCAAAGGTaGTGTTTTTGTAAAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRVLYFHLKAVSGIVASRPHFQR*CFCKMA Trigger: AGCCATTTTACAAAAACAGCACCTTTGGAAGTGTGG...CCTGGAGGCCACTATTCCACTAACAGCCTTCAAATGAAAATATAAAACTCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR GCA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACGTTCTTGGAAACAAATaGTCCTTTGAATGTACTCAG | + |
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Preference number: 4 (lower is better) Translates to: SNPATHWVKHIQTIKVTNVLGNK*SFECTQ Trigger: CTGAGTACATTCAAAGGAGCATTTGTTTCCAAGAAC...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | AATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAATACGTTTTCACTCCAATGTaGGCAAGAGACATAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: NTEAPGSVYAIFNKPSKYVFTPM*ARDIVH Trigger: ATGAACTATGTCTCTTGCCCACATTGGAGTGAAAAC...GTATTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CCA 90 bp | AATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAATACTCTTCTGCAAACTTTTaGGAAATCACTTTCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: NTEAPGSVYAIFNKPSKYSSANF*EITFQN Trigger: GTTCTGGAAAGTGATTTCCCAAAAGTTTGCAGAAGA...GTATTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 90 bp | ACTACCAAGGCGATCAGGACCAGGAGACCCACTCCGAGACCGATCTaGGCTTTCCTAGAGAGGCGGCAGCCAGGTCTGTCCCCAGACACC | + |
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Preference number: 5 (lower is better) Translates to: TTKAIRTRRPTPRPI*AFLERRQPGLSPDT Trigger: GGTGTCTGGGGACAGACCTGGCTGCCGCCTCTCTAGGAAAGCCCAGATCGGTCTCGGAGTGGGTCTCCTGGTCCTGATCGCCTTGGTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 90 bp | GTCTACACGATGGGTGCTCAGGGTTCTTCACACACTGAAGAAACCTaGCAGGCCTGTAGTTATCCACGCAGGCAAATATCATATTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: VYTMGAQGSSHTEET*QACSYPRRQISYSF Trigger: AAAGGAATATGATATTTGCCTGCGTGGATAACTACAGGCCTGCCAGGTTTCTTCAGTGTGTGAAGAACCCTGAGCACCCATCGTGTAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 90 bp | AGGGTGTCCTCCAGGGTGAACATCTTTCCCTGGATCCAAGTATATTaGTGGGCCAGGTGTTTGGATTTGCTCCAAAAGAGAGTCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RVSSRVNIFPWIQVY*WARCLDLLQKRVLL Trigger: TAACAAGACTCTCTTTTGGAGCAAATCCAAACACCTGGCCCATCAATATACTTGGATCCAGGGAAAGATGTTCACCCTGGAGGACACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 90 bp | TTCCAAAGGTGCTGTTTTTGTAAAATGGCTCACGGAGGGACCCATTaGGCATCACTTGGACCACACCACAGGCATCTTCTGCAAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: FQRCCFCKMAHGGTH*ASLGPHHRHLLQTF Trigger: AAAAGTTTGCAGAAGATGCCTGTGGTGTGGTCCAAGTGATGCTCAATGGGTCCCTCCGTGAGCCATTTTACAAAAACAGCACCTTTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 90 bp | CTGGAAGCTCCTTCGATGTCGTGCATCACCCAGGCCTGTAGTTTATaGACCTTATTTGGGTCCAAACTAAAGACTTCCACACTTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LEAPSMSCITQACSL*TLFGSKLKTSTLPK Trigger: CTTTGGAAGTGTGGAAGTCTTTAGTTTGGACCCAAATAAGGTTCATAAACTACAGGCCTGGGTGATGCACGACATCGAAGGAGCTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 90 bp | CAAACTAAAGACTTCCACACTTCCAAAGGTGCTGTTTTTGTAAAATaGCTCACGGAGGGACCCATTGAGCATCACTTGGACCACACCACA | + |
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Preference number: 5 (lower is better) Translates to: QTKDFHTSKGAVFVK*LTEGPIEHHLDHTT Trigger: TGTGGTGTGGTCCAAGTGATGCTCAATGGGTCCCTCCGTGAGCCATTTTACAAAAACAGCACCTTTGGAAGTGTGGAAGTCTTTAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 90 bp | TTGAGCATCACTTGGACCACACCACAGGCATCTTCTGCAAACTTTTaGGAAATCACTTTCCAGAACACAGTAATAGGGTTGTTGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: LSITWTTPQASSANF*EITFQNTVIGLLGQ Trigger: CTGTCCCAACAACCCTATTACTGTGTTCTGGAAAGTGATTTCCCAAAAGTTTGCAGAAGATGCCTGTGGTGTGGTCCAAGTGATGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 90 bp | GAGAGTCTTGTTACATGGTATGGTTTGAGTGACCAATTTAACAAGTaGGGCGTAGTCTTCTCTTGTGATGTTGCAAGGGTTCTTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: ESLVTWYGLSDQFNK*GVVFSCDVARVLGN Trigger: GTTTCCAAGAACCCTTGCAACATCACAAGAGAAGACTACGCCCCACTTGTTAAATTGGTCACTCAAACCATACCATGTAACAAGACTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAACCCATTGAGCATCACTaGGACCACACCACAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKPIEHH*DHTTGI Trigger: GATGCCTGTGGTGTGGTCCAAGTGATGCTCAATGGG...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | ATGAATACAGAAGCACCTGGCTCTGTTTATGCTATTTTCAATAAACCAAGCAAATCACGGAGGGACCCATaGAGCATCACTTGGACCACA | + |
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Preference number: 5 (lower is better) Translates to: MNTEAPGSVYAIFNKPSKSRRDP*SITWTT Trigger: TGTGGTCCAAGTGATGCTCAATGGGTCCCTCCGTGA...TTTGCTTGGTTTATTGAAAATAGCATAAACAGAGCCAGGTGCTTCTGTATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | GGCATGGCACAGGCAGAGCTGAGAGTTTTATATTTTCATTTGAAGGCTGTTAGTTCTTCTCTTGTGATGTaGCAAGGGTTCTTGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: GMAQAELRVLYFHLKAVSSSLVM*QGFLET Trigger: TGTTTCCAAGAACCCTTGCAACATCACAAGAGAAGA...ACTAACAGCCTTCAAATGAAAATATAAAACTCTCAGCTCTGCCTGTGCCATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | ATACCTTCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTACATTTAAGGAGGAGCTaGAACATGCGTTACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IPSNPATHWVKHIQTIKVHLRRS*NMRYWK Trigger: CTTCCAGTAACGCATGTTCAAGCTCCTCCTTAAATG...TACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGAAGGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | ATACCTTCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAATGTTGCAAGGGTTCTaGGAAACAAATGCTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: IPSNPATHWVKHIQTIKVMLQGF*ETNAPL Trigger: CAAAGGAGCATTTGTTTCCAAGAACCCTTGCAACAT...TACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGAAGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | TCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAACTAACACAGTAATAGGGTTGTaGGGACAGTTTTCACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SNPATHWVKHIQTIKVTNTVIGL*GQFSLQ Trigger: TTGGAGTGAAAACTGTCCCAACAACCCTATTACTGT...GTTAGTTACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS-3UTR CAA 90 bp | ATACCTTCTAATCCTGCCACTCACTGGGTCAAGCATATACAAACTATCAAAGTAGAAACAAATGCTCCTTaGAATGTACTCAGTATCTCC | + |
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Preference number: 5 (lower is better) Translates to: IPSNPATHWVKHIQTIKVETNAP*NVLSIS Trigger: GGAGATACTGAGTACATTCAAAGGAGCATTTGTTTC...TACTTTGATAGTTTGTATATGCTTGACCCAGTGAGTGGCAGGATTAGAAGGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 72 bp | GCGATCAGGACCAGGAGACCCACTCCGAGACCGATCTaGGCTTTCCTAGAGAGGCGGCAGCCAGGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AIRTRRPTPRPI*AFLERRQPGLS Trigger: GGACAGACCTGGCTGCCGCCTCTCTAGGAAAGCCCAGATCGGTCTCGGAGTGGGTCTCCTGGTCCTGATCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 72 bp | GTGCTTCGTGGTAGGCTCTCCAGTCCACACCAGGAGTaGGCGCGGCCTCAGAAGTATGACCACGATCCCTAC | + |
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Preference number: 6 (lower is better) Translates to: VLRGRLSSPHQE*ARPQKYDHDPY Trigger: GTAGGGATCGTGGTCATACTTCTGAGGCCGCGCTCACTCCTGGTGTGGACTGGAGAGCCTACCACGAAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 72 bp | ATGGGTGCTCAGGGTTCTTCACACACTGAAGAAACCTaGCAGGCCTGTAGTTATCCACGCAGGCAAATATCA | + |
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Preference number: 6 (lower is better) Translates to: MGAQGSSHTEET*QACSYPRRQIS Trigger: TGATATTTGCCTGCGTGGATAACTACAGGCCTGCCAGGTTTCTTCAGTGTGTGAAGAACCCTGAGCACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CAA 72 bp | GTAAAATGGCTCACGGAGGGACCCATTGAGCATCACTaGGACCACACCACAGGCATCTTCTGCAAACTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VKWLTEGPIEHH*DHTTGIFCKLL Trigger: CAAAAGTTTGCAGAAGATGCCTGTGGTGTGGTCCAAGTGATGCTCAATGGGTCCCTCCGTGAGCCATTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CAA 90 bp | CAGGGTGTCCTCCAGGGTGAACATCTTTCCCTGGATCCAAGTATATaGATGGGCCAGGTGTTTGGATTTGCTCCAAAAGAGAGTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QGVLQGEHLSLDPSI*MGQVFGFAPKESLV Trigger: AACAAGACTCTCTTTTGGAGCAAATCCAAACACCTGGCCCATCAATATACTTGGATCCAGGGAAAGATGTTCACCCTGGAGGACACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 72 bp | TCCAGGGTGAACATCTTTCCCTGGATCCAAGTATATTaGTGGGCCAGGTGTTTGGATTTGCTCCAAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SRVNIFPWIQVY*WARCLDLLQKR Trigger: TCTCTTTTGGAGCAAATCCAAACACCTGGCCCATCAATATACTTGGATCCAGGGAAAGATGTTCACCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS TCA 72 bp | CCTTCGATGTCGTGCATCACCCAGGCCTGTAGTTTATaGACCTTATTTGGGTCCAAACTAAAGACTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: PSMSCITQACSL*TLFGSKLKTST Trigger: TGTGGAAGTCTTTAGTTTGGACCCAAATAAGGTTCATAAACTACAGGCCTGGGTGATGCACGACATCGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CAA 72 bp | TGGGAAATCACTTTCCAGAACACAGTAATAGGGTTGTaGGGACAGTTTTCACTCCAATGTGGGCAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: WEITFQNTVIGL*GQFSLQCGQET Trigger: TGTCTCTTGCCCACATTGGAGTGAAAACTGTCCCAACAACCCTATTACTGTGTTCTGGAAAGTGATTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 72 bp | GTTACATGGTATGGTTTGAGTGACCAATTTAACAAGTaGGGCGTAGTCTTCTCTTGTGATGTTGCAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VTWYGLSDQFNK*GVVFSCDVARV Trigger: AACCCTTGCAACATCACAAGAGAAGACTACGCCCCACTTGTTAAATTGGTCACTCAAACCATACCATGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CAA 72 bp | TTTTGGGAAATCACTTTCCAGAACACAGTAATAGGGTaGTTGGGACAGTTTTCACTCCAATGTGGGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FWEITFQNTVIG*LGQFSLQCGQE Trigger: CTCTTGCCCACATTGGAGTGAAAACTGTCCCAACAACCCTATTACTGTGTTCTGGAAAGTGATTTCCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS GCA 72 bp | TTCTCTTGTGATGTTGCAAGGGTTCTTGGAAACAAATaGTCCTTTGAATGTACTCAGTATCTCCTGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FSCDVARVLGNK*SFECTQYLLAV Trigger: AACTGCCAGGAGATACTGAGTACATTCAAAGGAGCATTTGTTTCCAAGAACCCTTGCAACATCACAAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS GCA 72 bp | GGATCCAAGTATATTGATGGGCCAGGTGTTTGGATTTaGTCCAAAAGAGAGTCTTGTTACATGGTATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GSKYIDGPGVWI*SKRESCYMVWF Trigger: AAACCATACCATGTAACAAGACTCTCTTTTGGAGCAAATCCAAACACCTGGCCCATCAATATACTTGGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CCA 72 bp | AGTAATAGGGTTGTTGGGACAGTTTTCACTCCAATGTaGGCAAGAGACATAGTTCATATCAGAAGTACTAGG | + |
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Preference number: 6 (lower is better) Translates to: SNRVVGTVFTPM*ARDIVHIRSTR Trigger: CCTAGTACTTCTGATATGAACTATGTCTCTTGCCCACATTGGAGTGAAAACTGTCCCAACAACCCTATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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| CDS CAA 72 bp | TTTGCTCCAAAAGAGAGTCTTGTTACATGGTATGGTTaGAGTGACCAATTTAACAAGTGGGGCGTAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FAPKESLVTWYG*SDQFNKWGVVF Trigger: GAAGACTACGCCCCACTTGTTAAATTGGTCACTCAAACCATACCATGTAACAAGACTCTCTTTTGGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030964.6 |
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