Pregenerated sensors for CD34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016494Ensembl transcript IDs: ENSMUST00000016638.8, ENSMUST00000110815.9, ENSMUST00000194036.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCAGCCACCACATGTTGTCTTGCTGAATGGCCGTTTCTGGAAGTaGCCTGGCCGGTCCCGTTCTCCTGAGCCCCTCGGGTCACATTGG | + |
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Preference number: 1 (lower is better) Translates to: CQPPHVVLLNGRFWK*PGRSRSPEPLGSHW Trigger: CCAATGTGACCCGAGGGGCTCAGGAGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR TCA 90 bp | CCAACCAAATCACAGTTCTGTGTCAGCCACCACATGTTGTCTTGCTaGATGGCCGTTTCTGGAAGTGGCCTGGCCGGTCCCGTTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTKSQFCVSHHMLSC*MAVSGSGLAGPVLL Trigger: CAGGAGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACTGTGATTTGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR TCA 90 bp | CGTAATTTAGAGAAGGCCAAGGGCCTCAGAGCAAGAGTATTCCTTTaGAGAGCTCAGGTCAGGAGGTTTAGCTCAGCTGGGCCTGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: RNLEKAKGLRARVFL*RAQVRRFSSAGPGS Trigger: GCTACCAGGCCCAGCTGAGCTAAACCTCCTGACCTGAGCTCTTCAAAGGAATACTCTTGCTCTGAGGCCCTTGGCCTTCTCTAAATTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR CCA 90 bp | AACTCCTCACAACTAGATGCTTCACTTAGTTCCAGGCAGATACCCTaGGCCAACCTCACTTCTCGGATTCCAGAGCATTTGATTTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: NSSQLDASLSSRQIP*ANLTSRIPEHLISP Trigger: GGGAGAAATCAAATGCTCTGGAATCCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGAACTAAGTGAAGCATCTAGTTGTGAGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| 3UTR TCA 90 bp | CCAGGAACAGTTTCAGAAGTGTATGTAATAGGAGAAGGCCGGACATaGGCTGAAGGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTC | + |
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Preference number: 1 (lower is better) Translates to: PGTVSEVYVIGEGRT*AEGSMKSETRDATF Trigger: GAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCCTTCAGCTCATGTCCGGCCTTCTCCTATTACATACACTTCTGAAACTGTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR TCA 90 bp | AGGAAGTTGAATGTGCAGAAGGCAGTTTATCTGCCTTCCCCAAGGTaGAGAGTCCCAGGAACAGTTTCAGAAGTGTATGTAATAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: RKLNVQKAVYLPSPR*RVPGTVSEVYVIGE Trigger: TTCTCCTATTACATACACTTCTGAAACTGTTCCTGGGACTCTTCACCTTGGGGAAGGCAGATAAACTGCCTTCTGCACATTCAACTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGCCGGTCCCGTTCTCCTGAGCCCCTCGGGTCACATTGGCCTTTCCCTGAGGCCGGACATGAGCTaGAGGCAGCATGAAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GLAGPVLLSPSGHIGLSLRPDMS*RQHEVR Trigger: TCTGACTTCATGCTGCCTTCAGCTCATGTCCGGCCT...CAGGGAAAGGCCAATGTGACCCGAGGGGCTCAGGAGAACGGGACCGGCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTTGCCCACCCAACCAAATCACAGTTCTGTGTCAGCCACCACATGTTGTCGGCCGTTTCTGGAAGTaGCCTGGCCGGTCCCGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSCPPNQITVLCQPPHVVGRFWK*PGRSRS Trigger: AGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCC...GACAACATGTGGTGGCTGACACAGAACTGTGATTTGGTTGGGTGGGCAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR CAA 90 bp | CCACCCAACCAAATCACAGTTCTGTGTCAGCCACCACATGTTGTCTaGCTGAATGGCCGTTTCTGGAAGTGGCCTGGCCGGTCCCGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PPNQITVLCQPPHVV*LNGRFWKWPGRSRS Trigger: AGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACTGTGATTTGGTTGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGCTAGTCTTCCGGAGAGTTCCCGTGAAGAGGCGAGAGAGGAGAAATGGGGGTTGTGAGGTACTGTaGGGAGAGCACAAAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: EKLVFRRVPVKRRERRNGGCEVL*GEHKGS Trigger: ACTTCCTTTGTGCTCTCCTCACAGTACCTCACAACC...CCCATTTCTCCTCTCTCGCCTCTTCACGGGAACTCTCCGGAAGACTAGCTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | TATTCCTTTGAAGAGCTCAGGTCAGGAGGTTTAGCTCAGCTGGGCCTGGTAGCTGCAAGAGTATTCCTTTaGAGAGCTCAGGTCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YSFEELRSGGLAQLGLVAARVFL*RAQVRR Trigger: CCTCCTGACCTGAGCTCTTCAAAGGAATACTCTTGC...AGCTACCAGGCCCAGCTGAGCTAAACCTCCTGACCTGAGCTCTTCAAAGGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | ATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAAAGTTGTCCGGTCCCGTTCTCCTaGGCCCCTCGGGTCACATTG | + |
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Preference number: 2 (lower is better) Translates to: IRLSCCSKTLSRLQTESCPVPFS*APRVTL Trigger: CAATGTGACCCGAGGGGCTCAGGAGAACGGGACCGG...ACAACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR CAA 90 bp | TCTGTGTGGGCCCAAGGGATCAGATTGAGCTGTTGCTCTAAAACATaGAGCAGACTCCAGACAGAAAGTTGTCCTGGCCTCTGTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SVWAQGIRLSCCSKT*SRLQTESCPGLCRQ Trigger: CTGTCTACAGAGGCCAGGACAACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTGGGCCCACACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GATTGGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTATCTGCCTTCCCCAAGAGGCCGGACATGAGCTaGAGGCAGCATGAAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: DWIQEVECAEGSLSAFPKRPDMS*RQHEVR Trigger: TCTGACTTCATGCTGCCTTCAGCTCATGTCCGGCCT...CTTGGGGAAGGCAGATAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCTGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCTGGGTCCAGGGCAAGTaGTACATAGCCACCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LFWLYPCKGAHVSEYLGFWVQGK*YIATNF Trigger: AAAGTTGGTGGCTATGTAGCACTTGCCCTGGACCCA...GAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCCTAGCCATGCGAGAGAGGAGAAATaGGTCCAGGGCAAGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QKRIHPILSSLESFVPSHAREEK*VQGKCY Trigger: GTAGCACTTGCCCTGGACCCATTTCTCCTCTCTCGC...ATGGCTAGGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CATCACGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTCTGAATGGCCGTTTCTaGAAGTGGCCTGGCCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: HHVYSEENTPNPLISGKFLNGRF*KWPGRS Trigger: GGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAG...AAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCATAAAGTAGGGGAAGAAGCAGTAAAAATAGCAAAGTTTCCTGGGAAGCTGCCTTCCCCAAGGTaGAGAGTCCCAGGAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GFHKVGEEAVKIAKFPGKLPSPR*RVPGTV Trigger: AACTGTTCCTGGGACTCTTCACCTTGGGGAAGGCAG...CTTCCCAGGAAACTTTGCTATTTTTACTGCTTCTTCCCCTACTTTATGGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAACACATGTTGTCTTGCTaGATGGCCGTTTCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: WLYPCKGAHVSEYLGFHKHMLSC*MAVSGS Trigger: ACTTCCAGAAACGGCCATTCAGCAAGACAACATGTG...TTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAAGTAGGGGAAGAAGCAGTAAAAATAGCAAAGTTTCCTGGGAAGAAGTGGGCGAGAGAGGAGAAATaGGTCCAGGGCAAGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: HKVGEEAVKIAKFPGKKWAREEK*VQGKCY Trigger: GTAGCACTTGCCCTGGACCCATTTCTCCTCTCTCGC...CCACTTCTTCCCAGGAAACTTTGCTATTTTTACTGCTTCTTCCCCTACTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCCCTGCCTTCCCCAAGGTaGAGAGTCCCAGGAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: VYSEENTPNPLISGKFCSLPSPR*RVPGTV Trigger: AACTGTTCCTGGGACTCTTCACCTTGGGGAAGGCAG...GGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAATCTAGGTTGAACCAATaGGATTTCTGTGTGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QGIRLSCCSKTLSRLQTESRLNQ*DFCVGP Trigger: TGGGCCCACACAGAAATCTCATTGGTTCAACCTAGA...TTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCCTAGCCATCCTAAAGAAGCTGTGTaGAGCTCTGGGTTCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: QKRIHPILSSLESFVPSHPKEAV*SSGFKP Trigger: GGGTTTGAACCCAGAGCTTCACACAGCTTCTTTAGG...ATGGCTAGGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAAAGGTACAGCTACATGTaGAGCCTCTTTTCTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: WLYPCKGAHVSEYLGFHKRYSYM*SLFSSQ Trigger: TTGGGAAGAAAAGAGGCTGCACATGTAGCTGTACCT...TTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCCTAGCCATAGCTGTGTGAAGCTCTaGGTTCAAACCCCAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: QKRIHPILSSLESFVPSHSCVKL*VQTPAI Trigger: TATTGCTGGGGTTTGAACCCAGAGCTTCACACAGCT...ATGGCTAGGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAAGTAGGGGAAGAAGCAGTAAAAATAGCAAAGTTTCCTGGGAAGAAGTGGTGTTGTCTTGCTGAATaGCCGTTTCTGGAAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HKVGEEAVKIAKFPGKKWCCLAE*PFLEVA Trigger: GGCCACTTCCAGAAACGGCCATTCAGCAAGACAACA...CCACTTCTTCCCAGGAAACTTTGCTATTTTTACTGCTTCTTCCCCTACTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | CATCACGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTGAGCTGAAGGCAGCATaGAGTCAGAGACAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: HHVYSEENTPNPLISGKFELKAA*SQRQEM Trigger: CATCTCTTGTCTCTGACTTCATGCTGCCTTCAGCTC...AAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR GCA 90 bp | CATCACGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGGGTCCAGGGCAAGTaGTACATAGCCACCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: HHVYSEENTPNPLISGKFWVQGK*YIATNF Trigger: AAAGTTGGTGGCTATGTAGCACTTGCCCTGGACCCA...AAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCATAAAGTAGGGGAAGAAGCAGTAAAAATAGCAAAGTTTCCTGGGAAGTTGGATTCAGGAAGTTaGATGTGCAGAAGGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: GFHKVGEEAVKIAKFPGKLDSGS*MCRRQF Trigger: AAACTGCCTTCTGCACATTCAACTTCCTGAATCCAA...CTTCCCAGGAAACTTTGCTATTTTTACTGCTTCTTCCCCTACTTTATGGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | CGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCGTAGCTCAAGCTACTTaGAAGCCTAAAGAAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RLFRREYTQSSHLWKVLFVAQAT*KPKEAV Trigger: CACAGCTTCTTTAGGCTTCCAAGTAGCTTGAGCTAC...GAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CCA 90 bp | TATAAAATAGTGAAGGGGTTTGGACTAGGAAAGGCACAGACTGAAAGGAATCTGCCAAAGGTCAGAGATTaGATTCAGGAAGTTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: YKIVKGFGLGKAQTERNLPKVRD*IQEVEC Trigger: ACATTCAACTTCCTGAATCCAATCTCTGACCTTTGG...CAGATTCCTTTCAGTCTGTGCCTTTCCTAGTCCAAACCCCTTCACTATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR CCA 72 bp | CCACATGTTGTCTTGCTGAATGGCCGTTTCTGGAAGTaGCCTGGCCGGTCCCGTTCTCCTGAGCCCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: PHVVLLNGRFWK*PGRSRSPEPLG Trigger: CCCGAGGGGCTCAGGAGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR TCA 72 bp | TCACAGTTCTGTGTCAGCCACCACATGTTGTCTTGCTaGATGGCCGTTTCTGGAAGTGGCCTGGCCGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SQFCVSHHMLSC*MAVSGSGLAGP Trigger: GGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR CCA 72 bp | AGTTCTGTGTCAGCCACCACATGTTGTCTTGCTGAATaGCCGTTTCTGGAAGTGGCCTGGCCGGTCCCGTTC | + |
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Preference number: 3 (lower is better) Translates to: SSVSATTCCLAE*PFLEVAWPVPF Trigger: GAACGGGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR TCA 72 bp | GAGAAGGCCAAGGGCCTCAGAGCAAGAGTATTCCTTTaGAGAGCTCAGGTCAGGAGGTTTAGCTCAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: EKAKGLRARVFL*RAQVRRFSSAG Trigger: CCCAGCTGAGCTAAACCTCCTGACCTGAGCTCTTCAAAGGAATACTCTTGCTCTGAGGCCCTTGGCCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCAGAGATCTGCATACCACCCAGTaGCCCACCCAACCAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: APLDLGFFPPQLDPKVRDLHTTQ*PTQPNH Trigger: GTGATTTGGTTGGGTGGGCAACTGGGTGGTATGCAG...ATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | CACTCAGGCCTAACCTCAGACTGGGCTAGAAGCAGGGAGCAGACACTAGCACCACGGATTCCAGAGCATTaGATTTCTCCCTTAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: HSGLTSDWARSREQTLAPRIPEH*ISPLMA Trigger: TGCCATTAAGGGAGAAATCAAATGCTCTGGAATCCG...TGGTGCTAGTGTCTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCCTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| 3UTR CCA 72 bp | CAACTAGATGCTTCACTTAGTTCCAGGCAGATACCCTaGGCCAACCTCACTTCTCGGATTCCAGAGCATTTG | + |
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Preference number: 3 (lower is better) Translates to: QLDASLSSRQIP*ANLTSRIPEHL Trigger: CAAATGCTCTGGAATCCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGAACTAAGTGAAGCATCTAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| 3UTR TCA 72 bp | AGAAGTGTATGTAATAGGAGAAGGCCGGACATGAGCTaGAGGCAGCATGAAGTCAGAGACAAGAGATGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RSVCNRRRPDMS*RQHEVRDKRCH Trigger: GTGGCATCTCTTGTCTCTGACTTCATGCTGCCTTCAGCTCATGTCCGGCCTTCTCCTATTACATACACTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | CTTTTCTGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCTCTTCCCACCACAACTaGACCCAAAGGTCAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: LFWLYPCKGAHVSEYLGFSSHHN*TQRSEI Trigger: AATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGA...GAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAATCTTCCCACCACAACTaGACCCAAAGGTCAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: WLYPCKGAHVSEYLGFHKSSHHN*TQRSEI Trigger: AATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGA...TTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGACTCCAGACAGAAAGTTGTCCTGGCCTCTGTAGACAGACATTCAGGAACATGTTGCTCTAAAACATaGAGCAGACTCCAGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: ADSRQKVVLASVDRHSGTCCSKT*SRLQTE Trigger: TTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACA...TGTTCCTGAATGTCTGTCTACAGAGGCCAGGACAACTTTCTGTCTGGAGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR TCA 72 bp | AATGTGCAGAAGGCAGTTTATCTGCCTTCCCCAAGGTaGAGAGTCCCAGGAACAGTTTCAGAAGTGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: NVQKAVYLPSPR*RVPGTVSEVYV Trigger: TACATACACTTCTGAAACTGTTCCTGGGACTCTTCACCTTGGGGAAGGCAGATAAACTGCCTTCTGCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR TCA 72 bp | AAGTCTAATTCCACTGTCCTGTCTAGGTTGAACCAATaGGATTTCTGTGTGGGCCCAAGGGATCAGATTGAG | + |
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Preference number: 3 (lower is better) Translates to: KSNSTVLSRLNQ*DFCVGPRDQIE Trigger: CTCAATCTGATCCCTTGGGCCCACACAGAAATCTCATTGGTTCAACCTAGACAGGACAGTGGAATTAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR GCA 72 bp | ATTTCTGTGTGGGCCCAAGGGATCAGATTGAGCTGTTaGTCTAAAACATTGAGCAGACTCCAGACAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: ISVWAQGIRLSC*SKTLSRLQTES Trigger: ACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTGGGCCCACACAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| 3UTR-3UTR CAA 90 bp | TACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAAGTAGGGATTGGATTCAGGAAGTaGAATGTGCAGAAGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YPCKGAHVSEYLGFHKVGIGFRK*NVQKAV Trigger: AACTGCCTTCTGCACATTCAACTTCCTGAATCCAAT...CCCTACTTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| 3UTR CCA 72 bp | TTCTTCCCACCACAACTTGACCCAAAGGTCAGAGATTaGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FFPPQLDPKVRD*IQEVECAEGSL Trigger: TAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCATTGGATTCAGGAAGTaGAATGTGCAGAAGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLFRREYTQSSHLWKVLFIGFRK*NVQKAV Trigger: AACTGCCTTCTGCACATTCAACTTCCTGAATCCAAT...GAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| 3UTR CCA 72 bp | TTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTaGAAAGTTTTGTTCCTAGCCATCATTAAAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFRREYTQSSHL*KVLFLAIIKIR Trigger: CCTGATTTTAATGATGGCTAGGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTTCTCCTGAGCCCCTCGGGTCACATTGGCCTTTCCCTGAGTCTCAGGGGGGCCTAACCTCAGACTaGGCTAGAAGCAGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPEPLGSHWPFPESQGGLTSD*ARSREQ Trigger: CTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCC...CCCCTGAGACTCAGGGAAAGGCCAATGTGACCCGAGGGGCTCAGGAGAACGGGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCTGAGCCCCTCGGGTCACATTGGCCTTTCCCTGAGTCTCAGGGGAGGCCTGAGATGGCTGGTGTaGTCTTACTGCTGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPSGHIGLSLSLRGGLRWLV*SYCCPD Trigger: ATCAGGACAGCAGTAAGACCACACCAGCCATCTCAG...GCCTCCCCTGAGACTCAGGGAAAGGCCAATGTGACCCGAGGGGCTCAGGAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAAAGCTACCCAGCGCCATaGCAGCAGGAGCCCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLYPCKGAHVSEYLGFHKSYPAP*QQEPRA Trigger: CGCGCGGGGCTCCTGCTGCCATGGCGCTGGGTAGCT...TTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAAGTAGGGAGCTACCCAGCGCCATaGCAGCAGGAGCCCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: YPCKGAHVSEYLGFHKVGSYPAP*QQEPRA Trigger: CGCGCGGGGCTCCTGCTGCCATGGCGCTGGGTAGCT...CCCTACTTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCTTTGAAGAGCTCAGGTCAGGAGGTTTAGCTCAGCTGGGCCTGGTAGCTCTGAATGGCCGTTTCTaGAAGTGGCCTGGCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSFEELRSGGLAQLGLVALNGRF*KWPGRS Trigger: GGACCGGCCAGGCCACTTCCAGAAACGGCCATTCAG...AGCTACCAGGCCCAGCTGAGCTAAACCTCCTGACCTGAGCTCTTCAAAGGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGCCTAACCTCAGACTGGGCTAGAAGCAGGGAGCAGACACTAGCACCATGGGGAAGTCTGAGATaGCTGGTGTGGTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSGLTSDWARSREQTLAPWGSLR*LVWSYC Trigger: GCAGTAAGACCACACCAGCCATCTCAGACTTCCCCA...TGGTGCTAGTGTCTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCAGAGATTCCAGGCAGATACCCTaGGCCAACCTCACTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: APLDLGFFPPQLDPKVRDSRQIP*ANLTSR Trigger: CCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGA...ATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTTGGGCCTAACCTCAGACTaGGCTAGAAGCAGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSMKSETRDATFLHTTQLGLTSD*ARSREQ Trigger: CTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCC...CAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TCCCGTTCTCCTGAGCCCCTCGGGTCACATTGGCCTTTCCCTGAGTCTCAGGGGTGCTTTTCCATAAGCTaGAGTTTGCTGGGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPEPLGSHWPFPESQGCFSIS*SLLGSS Trigger: AGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCA...CCCCTGAGACTCAGGGAAAGGCCAATGTGACCCGAGGGGCTCAGGAGAACGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| 3UTR CAA 72 bp | CAAATCACAGTTCTGTGTCAGCCACCACATGTTGTCTaGCTGAATGGCCGTTTCTGGAAGTGGCCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QITVLCQPPHVV*LNGRFWKWPGR Trigger: CCGGCCAGGCCACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACTGTGATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTTGTGGAGTTCCAGAGCCTaGAGGGATCCCAGAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSMKSETRDATFLHTTQLWSSRA*RDPRGN Trigger: GTTACCTCTGGGATCCCTTCAGGCTCTGGAACTCCA...CAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCCAGGCAGATACCCTGGGCCAACCTCACTTCTCGGATTCCAGAGCATTCCAGTTGGGGAAGTCTaGGATGGCTGGTGTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVPGRYPGPTSLLGFQSIPVGEV*DGWCGL Trigger: AAGACCACACCAGCCATCTCAGACTTCCCCAACTGG...AATGCTCTGGAATCCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| 3UTR CAA 72 bp | GAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTaGCCCACCCAACCAAATCACAGTTCTGTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETRDATFLHTTQ*PTQPNHSSVSA Trigger: GGCTGACACAGAACTGTGATTTGGTTGGGTGGGCAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTGTCAGCCACCACATGTTGTCTTGCTGAATGGCCGTTTCTGGAAGTGTGGAGTTCCAGAGCCTaGAGGGATCCCAGAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVSATTCCLAEWPFLEVWSSRA*RDPRGN Trigger: GTTACCTCTGGGATCCCTTCAGGCTCTGGAACTCCA...CACTTCCAGAAACGGCCATTCAGCAAGACAACATGTGGTGGCTGACACAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCCAAGGTGAAGAGTCCCAGGAACAGTTTCAGAAGTGTATGTAATAGGAGAGGCCGTTTCTGGAAGTaGCCTGGCCGGTCCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPKVKSPRNSFRSVCNRRGRFWK*PGRSRS Trigger: AGAACGGGACCGGCCAGGCCACTTCCAGAAACGGCC...TCTCCTATTACATACACTTCTGAAACTGTTCCTGGGACTCTTCACCTTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGCTAGTCTTCCGGAGAGTTCCCGTGAAGAGGCGAGAGAGGAGAAATGGGTGTTGTCTTGCTGAATaGCCGTTTCTGGAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVFRRVPVKRRERRNGCCLAE*PFLEVA Trigger: GGCCACTTCCAGAAACGGCCATTCAGCAAGACAACA...CCCATTTCTCCTCTCTCGCCTCTTCACGGGAACTCTCCGGAAGACTAGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATACCCTGGGCCAACCTCACTTCTCGGATTCCAGAGCATTTGATTTCTCCAGGCAGTATGCCAGTTaGGGAAGTCTGAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADTLGQPHFSDSRAFDFSRQYAS*GSLRWL Trigger: CAGCCATCTCAGACTTCCCCAACTGGCATACTGCCT...GGAGAAATCAAATGCTCTGGAATCCGAGAAGTGAGGTTGGCCCAGGGTATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCTAGTCTTCCGGAGAGTTCCCGTGAAGAGGCGAGAGAGGAGAAATGGGGGAAGTCTGTGGTTGTaGAAAAGTGTGTGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVFRRVPVKRRERRNGGSLWL*KSVWSS Trigger: GGAACTCCACACACTTTTTCACAACCACAGACTTCC...CCCATTTCTCCTCTCTCGCCTCTTCACGGGAACTCTCCGGAAGACTAGCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GATTGGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTATCTGCCTTCCCCAAGTCCAGGCAGATACCCTaGGCCAACCTCACTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DWIQEVECAEGSLSAFPKSRQIP*ANLTSR Trigger: CCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGA...CTTGGGGAAGGCAGATAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| 3UTR CAA 72 bp | CCCTGGGCCAACCTCACTTCTCGGATTCCAGAGCATTaGATTTCTCCCTTAATGGCACTCGGAGCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PWANLTSRIPEH*ISPLMALGAED Trigger: ATCTTCTGCTCCGAGTGCCATTAAGGGAGAAATCAAATGCTCTGGAATCCGAGAAGTGAGGTTGGCCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCCCCGGTCCCGTTCTCCTaGGCCCCTCGGGTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEENTPNPLISGKFCSPVPFS*APRVTL Trigger: CAATGTGACCCGAGGGGCTCAGGAGAACGGGACCGG...GGAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGCTAGTCTTCCGGAGAGTTCCCGTGAAGAGGCGAGAGAGGAGAAATGGGCTGGTGTGGTCTTACTaGTGTCCTGATAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKLVFRRVPVKRRERRNGLVWSY*CPDRSS Trigger: ACTTGATCTATCAGGACAGCAGTAAGACCACACCAG...CCCATTTCTCCTCTCTCGCCTCTTCACGGGAACTCTCCGGAAGACTAGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCACTTAGTTCCAGGCAGATACCCTGGGCCAACCTCACTTCTCGGATTCCACTGGTGTGGTCTTACTaGTGTCCTGATAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSRQIPWANLTSRIPLVWSY*CPDRSS Trigger: ACTTGATCTATCAGGACAGCAGTAAGACCACACCAG...TGGAATCCGAGAAGTGAGGTTGGCCCAGGGTATCTGCCTGGAACTAAGTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| 3UTR CAA 72 bp | GCCCAAGGGATCAGATTGAGCTGTTGCTCTAAAACATaGAGCAGACTCCAGACAGAAAGTTGTCCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQGIRLSCCSKT*SRLQTESCPGL Trigger: GAGGCCAGGACAACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCAGAGATCTGGTGTGGTCTTACTaGTGTCCTGATAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APLDLGFFPPQLDPKVRDLVWSY*CPDRSS Trigger: ACTTGATCTATCAGGACAGCAGTAAGACCACACCAG...ATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAAGATGATGTGTAAGCATATGGCTCGGTGGGTGATGTCATCTCAAAGCCTGAGATGGCTGGTGTaGTCTTACTGCTGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQKMMCKHMARWVMSSQSLRWLV*SYCCPD Trigger: ATCAGGACAGCAGTAAGACCACACCAGCCATCTCAG...GCTTTGAGATGACATCACCCACCGAGCCATATGCTTACACATCATCTTCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTTGGAAGTTCTGTGCTATTaGCCAAGACCATCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSMKSETRDATFLHTTQLEVLCY*PRPSAN Trigger: GTTTGCTGATGGTCTTGGCCAATAGCACAGAACTTC...CAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATATGCTGGGAAGTTCTGTaGTATTGGCCAAGACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGCTLAREHMSVNTLVSICWEVL*YWPRPS Trigger: TGATGGTCTTGGCCAATAGCACAGAACTTCCCAGCA...TATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCTGTTTATTGAAGCTTTaGATCCCCAGCTTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAPLDLGFFPPQLDPKVCLLKL*IPSFLK Trigger: CTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACA...GACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGCTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCTGTTTATTGAAGCTTTaGATCCCCAGCTTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEGSMKSETRDATFLHTTCLLKL*IPSFLK Trigger: CTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACA...GGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCCTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAAGGAAGTCTGTGGTTGTaGAAAAGTGTGTGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGIRLSCCSKTLSRLQTEGSLWL*KSVWSS Trigger: GGAACTCCACACACTTTTTCACAACCACAGACTTCC...TTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCGATATCTTGTTTATTaGAGCTTTGGATCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFWLYPCKGAHVSEYLGFRYLVY*SFGSPA Trigger: AGCTGGGGATCCAAAGCTTCAATAAACAAGATATCG...GAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAACTCAAGTCAGATTGGTaGTTTTCCATAAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLYPCKGAHVSEYLGFHKLKSDW*FSISWS Trigger: ACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAG...TTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR GCA 90 bp | GAGATTGGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTATCTGCCTTCCCCACTCAAGTCAGATTGGTaGTTTTCCATAAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIGFRKLNVQKAVYLPSPLKSDW*FSISWS Trigger: ACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAG...TGGGGAAGGCAGATAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | GACCCAAAGGTCAGAGATTGGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTAGAAGTTCTGTGCTATTaGCCAAGACCATCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DPKVRDWIQEVECAEGSLEVLCY*PRPSAN Trigger: GTTTGCTGATGGTCTTGGCCAATAGCACAGAACTTC...TAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATCTCTGACCTTTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | TATAAAATAGTGAAGGGGTTTGGACTAGGAAAGGCACAGACTGAAAGGAATCTGCACATGTTGTCTTGCTaGATGGCCGTTTCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKIVKGFGLGKAQTERNLHMLSC*MAVSGS Trigger: ACTTCCAGAAACGGCCATTCAGCAAGACAACATGTG...CAGATTCCTTTCAGTCTGTGCCTTTCCTAGTCCAAACCCCTTCACTATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAGTGAAGGGGTTTGGACTAGGAAAGGCACAGACTGAAAGGAATCTGTGCTGGGAAGTTCTGTaGTATTGGCCAAGACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YKIVKGFGLGKAQTERNLCWEVL*YWPRPS Trigger: TGATGGTCTTGGCCAATAGCACAGAACTTCCCAGCA...CAGATTCCTTTCAGTCTGTGCCTTTCCTAGTCCAAACCCCTTCACTATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | CATCACGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTCTGAGATGGCTGGTGTaGTCTTACTGCTGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HHVYSEENTPNPLISGKFLRWLV*SYCCPD Trigger: ATCAGGACAGCAGTAAGACCACACCAGCCATCTCAG...AAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | CGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGTTCAGTGGAAATACTGTCTaGAGTAGTAGGCAGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFRREYTQSSHLWKVLFSGNTV*SSRQYA Trigger: GGCATACTGCCTACTACTTCAGACAGTATTTCCACT...GAACAAAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR TCA 90 bp | ATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAAAGTTGTCGATATCTTGTTTATTaGAGCTTTGGATCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRLSCCSKTLSRLQTESCRYLVY*SFGSPA Trigger: AGCTGGGGATCCAAAGCTTCAATAAACAAGATATCG...ACAACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS-3UTR CCA 90 bp | CATCACGTTTATTCAGAAGAGAATACACCCAATCCTCTCATCTCTGGAAAGTTTTGCTTTTCCATAAGCTaGAGTTTGCTGGGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHVYSEENTPNPLISGKFCFSIS*SLLGSS Trigger: AGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCA...AAACTTTCCAGAGATGAGAGGATTGGGTGTATTCTCTTCTGAATAAACGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
||
| CDS CCA 90 bp | CTATTGGCCAAGACCATCAGCAAACACTCAGGCCTAACCTCAGACTaGGCTAGAAGCAGGGAGCAGACACTAGCACCAGCATCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLAKTISKHSGLTSD*ARSREQTLAPASAS Trigger: TGAGGCTGATGCTGGTGCTAGTGTCTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCCTGAGTGTTTGCTGATGGTCTTGGCCAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS GCA 90 bp | ACCAGTGGTGCCCAAGATGGCCAGCAGAACTCCAGAGGTGACCAATaGAATAAGAGTCTTTCGGGAATAGCTCTGGTGGCTCCCGATATC | + |
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Preference number: 5 (lower is better) Translates to: TSGAQDGQQNSRGDQ*NKSLSGIALVAPDI Trigger: GATATCGGGAGCCACCAGAGCTATTCCCGAAAGACTCTTATTGCATTGGTCACCTCTGGAGTTCTGCTGGCCATCTTGGGCACCACTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS GCA 90 bp | CAGTATGCCAGTTGGGGAAGTCTGAGATGGCTGGTGTGGTCTTACTaGTGTCCTGATAGATCAAGTAGTGGCTGGTACTTCCAGGGATGC | + |
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Preference number: 5 (lower is better) Translates to: QYASWGSLRWLVWSY*CPDRSSSGWYFQGC Trigger: GCATCCCTGGAAGTACCAGCCACTACTTGATCTATCAGGACAGCAGTAAGACCACACCAGCCATCTCAGACTTCCCCAACTGGCATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGCTAGTCTTCCGGAGAGTTCCCGTGAAGAGGCGAGAGAGGAGAAATGGGTCCATAAGCTGGAGTTaGCTGGGAAGTTCTGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: EKLVFRRVPVKRRERRNGSISWS*LGSSVL Trigger: TAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGA...CCCATTTCTCCTCTCTCGCCTCTTCACGGGAACTCTCCGGAAGACTAGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | TTGGCAGCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCTCCATAAGCTGGAGTTaGCTGGGAAGTTCTGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: LAAPLDLGFFPPQLDPKVSISWS*LGSSVL Trigger: TAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGA...GACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | GGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTTGGGAAGTTCTGTGCTATaGGCCAAGACCATCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GSMKSETRDATFLHTTQLGSSVL*AKTISK Trigger: TTTGCTGATGGTCTTGGCCAATAGCACAGAACTTCC...CAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | TCTGGCTGTACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATACCACCACATGTTGTCTaGCTGAATGGCCGTTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SGCTLAREHMSVNTLVSIPPHVV*LNGRFW Trigger: CCAGAAACGGCCATTCAGCAAGACAACATGTGGTGG...TATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTACAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016638.8 |
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| CDS CCA 90 bp | TGGATCCCCAGCTTTCTCAAGTCAGATTGGTGCTTTTCCATAAGCTaGAGTTTGCTGGGAAGTTCTGTGCTATTGGCCAAGACCATCAGC | + |
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Preference number: 5 (lower is better) Translates to: WIPSFLKSDWCFSIS*SLLGSSVLLAKTIS Trigger: GCTGATGGTCTTGGCCAATAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCTGGGGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | GGCAGCATGAAGTCAGAGACAAGAGATGCCACTTTCCTGCATACCACCCAGTTGCGGATTCCAGAGCATTaGATTTCTCCCTTAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: GSMKSETRDATFLHTTQLRIPEH*ISPLMA Trigger: TGCCATTAAGGGAGAAATCAAATGCTCTGGAATCCG...CAACTGGGTGGTATGCAGGAAAGTGGCATCTCTTGTCTCTGACTTCATGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | GCTCCTCTAGACCTAGGCTTCTTCCCACCACAACTTGACCCAAAGGTCAGAGATGAGGTAACTGTAAAGTaGACCATAGTCTCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: APLDLGFFPPQLDPKVRDEVTVK*TIVSEM Trigger: CATCTCAGAGACTATGGTCAACTTTACAGTTACCTC...ATCTCTGACCTTTGGGTCAAGTTGTGGTGGGAAGAAGCCTAGGTCTAGAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS TCA 90 bp | GAGTCTTTCGGGAATAGCTCTGGTGGCTCCCGATATCTTGTTTATTaGAGCTTTGGATCCCCAGCTTTCTCAAGTCAGATTGGTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ESFGNSSGGSRYLVY*SFGSPAFSSQIGAF Trigger: AAAAGCACCAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACAAGATATCGGGAGCCACCAGAGCTATTCCCGAAAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | TACCCTTGCAAGGGAGCACATGTCAGTGAATACCTTGGTTTCCATAAAGTAGGGGAGGTAACTGTAAAGTaGACCATAGTCTCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: YPCKGAHVSEYLGFHKVGEVTVK*TIVSEM Trigger: CATCTCAGAGACTATGGTCAACTTTACAGTTACCTC...CCCTACTTTATGGAAACCAAGGTATTCACTGACATGTGCTCCCTTGCAAGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | GACCCAAAGGTCAGAGATTGGATTCAGGAAGTTGAATGTGCAGAAGGCAGTTTACGGATTCCAGAGCATTaGATTTCTCCCTTAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: DPKVRDWIQEVECAEGSLRIPEH*ISPLMA Trigger: TGCCATTAAGGGAGAAATCAAATGCTCTGGAATCCG...TAAACTGCCTTCTGCACATTCAACTTCCTGAATCCAATCTCTGACCTTTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | CAAGGGATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAACCGATATCTTGTTTATaGAAGCTTTGGATCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QGIRLSCCSKTLSRLQTEPISCL*KLWIPS Trigger: GCTGGGGATCCAAAGCTTCAATAAACAAGATATCGG...TTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGATCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS GCA 90 bp | TGTTTATTGAAGCTTTGGATCCCCAGCTTTCTCAAGTCAGATTGGTaGTTTTCCATAAGCTGGAGTTTGCTGGGAAGTTCTGTGCTATTG | + |
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Preference number: 5 (lower is better) Translates to: CLLKLWIPSFLKSDW*FSISWSLLGSSVLL Trigger: CAATAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CCA 90 bp | TCTTGTTTATTGAAGCTTTGGATCCCCAGCTTTCTCAAGTCAGATTaGTGCTTTTCCATAAGCTGGAGTTTGCTGGGAAGTTCTGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: SCLLKLWIPSFLKSD*CFSISWSLLGSSVL Trigger: TAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS-3UTR CAA 90 bp | ATCAGATTGAGCTGTTGCTCTAAAACATTGAGCAGACTCCAGACAGAAAGTTGTCCGATATCTTGTTTATaGAAGCTTTGGATCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: IRLSCCSKTLSRLQTESCPISCL*KLWIPS Trigger: GCTGGGGATCCAAAGCTTCAATAAACAAGATATCGG...ACAACTTTCTGTCTGGAGTCTGCTCAATGTTTTAGAGCAACAGCTCAATCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CCA 72 bp | AAGACCATCAGCAAACACTCAGGCCTAACCTCAGACTaGGCTAGAAGCAGGGAGCAGACACTAGCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KTISKHSGLTSD*ARSREQTLAPA Trigger: TGCTGGTGCTAGTGTCTGCTCCCTGCTTCTAGCCCAGTCTGAGGTTAGGCCTGAGTGTTTGCTGATGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 90 bp | TGTGGAGTTCCAGAGCCTGAAGGGATCCCAGAGGTAACTGTAAAGTaGACCATAGTCTCTGAGATGGCTGGTGTGGTCTTACTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CGVPEPEGIPEVTVK*TIVSEMAGVVLLLS Trigger: GGACAGCAGTAAGACCACACCAGCCATCTCAGAGACTATGGTCAACTTTACAGTTACCTCTGGGATCCCTTCAGGCTCTGGAACTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CCA 72 bp | CAGTATGCCAGTTGGGGAAGTCTGAGATGGCTGGTGTaGTCTTACTGCTGTCCTGATAGATCAAGTAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QYASWGSLRWLV*SYCCPDRSSSG Trigger: GCCACTACTTGATCTATCAGGACAGCAGTAAGACCACACCAGCCATCTCAGACTTCCCCAACTGGCATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| CDS GCA 72 bp | AGTTGGGGAAGTCTGAGATGGCTGGTGTGGTCTTACTaGTGTCCTGATAGATCAAGTAGTGGCTGGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: SWGSLRWLVWSY*CPDRSSSGWYF Trigger: GAAGTACCAGCCACTACTTGATCTATCAGGACAGCAGTAAGACCACACCAGCCATCTCAGACTTCCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| CDS CCA 72 bp | AGTAGTAGGCAGTATGCCAGTTGGGGAAGTCTGAGATaGCTGGTGTGGTCTTACTGCTGTCCTGATAGATCA | + |
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Preference number: 6 (lower is better) Translates to: SSRQYASWGSLR*LVWSYCCPDRS Trigger: TGATCTATCAGGACAGCAGTAAGACCACACCAGCCATCTCAGACTTCCCCAACTGGCATACTGCCTACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194036.2 |
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| CDS CAA 72 bp | CCAGAGCCTGAAGGGATCCCAGAGGTAACTGTAAAGTaGACCATAGTCTCTGAGATGGCTGGTGTGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: PEPEGIPEVTVK*TIVSEMAGVVL Trigger: TAAGACCACACCAGCCATCTCAGAGACTATGGTCAACTTTACAGTTACCTCTGGGATCCCTTCAGGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 90 bp | CCCAGCTTTCTCAAGTCAGATTGGTGCTTTTCCATAAGCTGGAGTTaGCTGGGAAGTTCTGTGCTATTGGCCAAGACCATCAGCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: PSFLKSDWCFSISWS*LGSSVLLAKTISKH Trigger: GTGTTTGCTGATGGTCTTGGCCAATAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 72 bp | CTCAAGTCAGATTGGTGCTTTTCCATAAGCTGGAGTTaGCTGGGAAGTTCTGTGCTATTGGCCAAGACCATC | + |
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Preference number: 6 (lower is better) Translates to: LKSDWCFSISWS*LGSSVLLAKTI Trigger: GATGGTCTTGGCCAATAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 72 bp | GCTCTGGTGGCTCCCGATATCTTGTTTATTGAAGCTTaGGATCCCCAGCTTTCTCAAGTCAGATTGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ALVAPDILFIEA*DPQLSQVRLVL Trigger: AAGCACCAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACAAGATATCGGGAGCCACCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CCA 72 bp | AGCTTTCTCAAGTCAGATTGGTGCTTTTCCATAAGCTaGAGTTTGCTGGGAAGTTCTGTGCTATTGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SFLKSDWCFSIS*SLLGSSVLLAK Trigger: CTTGGCCAATAGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 90 bp | TGCAATAAGAGTCTTTCGGGAATAGCTCTGGTGGCTCCCGATATCTaGTTTATTGAAGCTTTGGATCCCCAGCTTTCTCAAGTCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: CNKSLSGIALVAPDI*FIEALDPQLSQVRL Trigger: CAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACAAGATATCGGGAGCCACCAGAGCTATTCCCGAAAGACTCTTATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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| CDS CAA 90 bp | ATCTTGTTTATTGAAGCTTTGGATCCCCAGCTTTCTCAAGTCAGATaGGTGCTTTTCCATAAGCTGGAGTTTGCTGGGAAGTTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILFIEALDPQLSQVR*VLFHKLEFAGKFCA Trigger: AGCACAGAACTTCCCAGCAAACTCCAGCTTATGGAAAAGCACCAATCTGACTTGAGAAAGCTGGGGATCCAAAGCTTCAATAAACAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016638.8 ENSMUST00000110815.9 |
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