Pregenerated sensors for CD33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004609Ensembl transcript IDs: ENSMUST00000004728.12, ENSMUST00000039861.7, ENSMUST00000205503.2, ENSMUST00000206371.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATTCGTGCTTGCATGTGCTTGCATGTGCAGTGTGAGTCCAAGTaGCTGGGGAAACCACAAGATGGCGTCAGACCTTCTGAAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CIRACMCLHVQCESK*LGKPQDGVRPSEAG Trigger: TCCAGCTTCAGAAGGTCTGACGCCATCTTGTGGTTTCCCCAGGCACTTGGACTCACACTGCACATGCAAGCACATGCAAGCACGAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 90 bp | TTCGTGCTTGCATGTGCTTGCATGTGCAGTGTGAGTCCAAGTGCCTaGGGAAACCACAAGATGGCGTCAGACCTTCTGAAGCTGGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: FVLACACMCSVSPSA*GNHKMASDLLKLEF Trigger: AAACTCCAGCTTCAGAAGGTCTGACGCCATCTTGTGGTTTCCCCAGGCACTTGGACTCACACTGCACATGCAAGCACATGCAAGCACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 90 bp | GATCTTCTAGAAATGGTTTACTGTGGAGCTGAGATGATGAGCCCTTaGAGGCAAGGCCAGAGGGACAAGTCTCAGGATTCGATTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: DLLEMVYCGAEMMSP*RQGQRDKSQDSIPA Trigger: AGCAGGAATCGAATCCTGAGACTTGTCCCTCTGGCCTTGCCTCCAAGGGCTCATCATCTCAGCTCCACAGTAAACCATTTCTAGAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 90 bp | GAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCAGATaGTGTCAACTGAGTGTAAGACTCACACACAGCAGCATAACCCAC | + |
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Preference number: 1 (lower is better) Translates to: EGAQTLSRVSYCKVR*CQLSVRLTHSSITH Trigger: GTGGGTTATGCTGCTGTGTGTGAGTCTTACACTCAGTTGACATCATCTGACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR TCA 90 bp | AGGTGCCTATGGAGTCCAGAACTGGGCATTAGATCACTTGAAAATTaGGTTAGAGATGGTTGTGAGCTGTCTGTAGGAGTACTGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: RCLWSPELGIRSLEN*VRDGCELSVGVLRA Trigger: GGCTCTCAGTACTCCTACAGACAGCTCACAACCATCTCTAACTCAATTTTCAAGTGATCTAATGCCCAGTTCTGGACTCCATAGGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 90 bp | GCTGTCTGTAGGAGTACTGAGAGCCATTACATTACAGACTTTTCCTaGGAAGATGCTACACAAACTTATACCCACCCCAGAAAGAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: AVCRSTESHYITDFS*EDATQTYTHPRKKV Trigger: GACTTTCTTTCTGGGGTGGGTATAAGTTTGTGTAGCATCTTCCCAGGAAAAGTCTGTAATGTAATGGCTCTCAGTACTCCTACAGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 90 bp | AGTGGTCCCAGAAATTCTTCCAGGAAACTCCTGGAATATTTTAAGTaGTTAAACACCTTCAGCAAAGTGACTGGATACAAAACTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: SGPRNSSRKLLEYFK*LNTFSKVTGYKTNN Trigger: GTTGTTAGTTTTGTATCCAGTCACTTTGCTGAAGGTGTTTAATCACTTAAAATATTCCAGGAGTTTCCTGGAAGAATTTCTGGGACCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCCAGTGGCACACTTTCTCCAACTAGGCCACACCTATTCAACAAGGCCACATGGGCAAGGGCCTTaGCACACACATGTGTATATT | + |
|
Preference number: 2 (lower is better) Translates to: PAPVAHFLQLGHTYSTRPHGQGP*HTHVYI Trigger: AATATACACATGTGTGTGCCAAGGCCCTTGCCCATG...TGGCCTTGTTGAATAGGTGTGGCCTAGTTGGAGAAAGTGTGCCACTGGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGTAAAAATGGACACCTTACCAAAAACAATCTACAGATTCAATGTGATCCCACACTGGGCCTGGCTTaGGCATTTAAAACCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: HSKNGHLTKNNLQIQCDPTLGLA*AFKTPK Trigger: CTTTGGGGTTTTAAATGCTCAAGCCAGGCCCAGTGT...GGGATCACATTGAATCTGTAGATTGTTTTTGGTAAGGTGTCCATTTTTACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATATATTGCAAAGTCAGATaGTGTCAACTGAGTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LCPMGAIFIQTTIPCVRIYCKVR*CQLSVR Trigger: TCTTACACTCAGTTGACATCATCTGACTTTGCAATA...TATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR-3UTR GCA 90 bp | AGATCAGGCATACAGAGCACATACCTAAACATAATAAAGGCAATACACAGCAATCTGGGATCAGAGGGATaGAGGAATTATCCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RSGIQSTYLNIIKAIHSNLGSEG*RNYPQE Trigger: TTCCTGTGGATAATTCCTGCATCCCTCTGATCCCAG...ATTGCTGTGTATTGCCTTTATTATGTTTAGGTATGTGCTCTGTATGCCTGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CAA 90 bp | TTGCATGGTATTTTAGGCCAATTCATGCGGGTAACAGAAACCAACTaGGATATTCTACAAAAACATTACATGCTCTTAACCAGTGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LHGILGQFMRVTETN*DILQKHYMLLTSEP Trigger: TGGCTCACTGGTTAAGAGCATGTAATGTTTTTGTAGAATATCCAAGTTGGTTTCTGTTACCCGCATGAATTGGCCTAAAATACCATGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | AAGGGTGACCCCAGAAACTCACTGTCCAGCCAGTCTTaGCTAAACAGCAAGCTCCAGGCTCAGGGAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: KGDPRNSLSSQS*LNSKLQAQGEL Trigger: AAGCTCTCCCTGAGCCTGGAGCTTGCTGTTTAGGCAAGACTGGCTGGACAGTGAGTTTCTGGGGTCACCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | GGGAGTCTGACACCCTCTTCTGACTTCTGTGGGCACTaGATGCACATGGTGTGTAGGCATAGATGCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GSLTPSSDFCGH*MHMVCRHRCRH Trigger: GTGCCTGCATCTATGCCTACACACCATGTGCATGCAGTGCCCACAGAAGTCAGAAGAGGGTGTCAGACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | GTGCATTCGTGCTTGCATGTGCTTGCATGTGCAGTGTaGGTCCAAGTGCCTGGGGAAACCACAAGATGGCGT | + |
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Preference number: 3 (lower is better) Translates to: VHSCLHVLACAV*VQVPGETTRWR Trigger: ACGCCATCTTGTGGTTTCCCCAGGCACTTGGACTCACACTGCACATGCAAGCACATGCAAGCACGAATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 72 bp | CACCCTCTTCTGACTTCTGTGGGCACTGCATGCACATaGTGTGTAGGCATAGATGCAGGCACTCGTACACAC | + |
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Preference number: 3 (lower is better) Translates to: HPLLTSVGTACT*CVGIDAGTRTH Trigger: GTGTGTACGAGTGCCTGCATCTATGCCTACACACCATGTGCATGCAGTGCCCACAGAAGTCAGAAGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 72 bp | GCATGTGCTTGCATGTGCAGTGTGAGTCCAAGTGCCTaGGGAAACCACAAGATGGCGTCAGACCTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACACMCSVSPSA*GNHKMASDLLK Trigger: CTTCAGAAGGTCTGACGCCATCTTGTGGTTTCCCCAGGCACTTGGACTCACACTGCACATGCAAGCACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 72 bp | GAAATGGTTTACTGTGGAGCTGAGATGATGAGCCCTTaGAGGCAAGGCCAGAGGGACAAGTCTCAGGATTCG | + |
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Preference number: 3 (lower is better) Translates to: EMVYCGAEMMSP*RQGQRDKSQDS Trigger: CGAATCCTGAGACTTGTCCCTCTGGCCTTGCCTCCAAGGGCTCATCATCTCAGCTCCACAGTAAACCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | AGTAGCATGTGGGTGACTGAGGCAGGAGGATTGCCATaGGTTCTACATTGGTCTGGGCTTCAGAGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: SSMWVTEAGGLP*VLHWSGLQSET Trigger: TGTCTCACTCTGAAGCCCAGACCAATGTAGAACTCATGGCAATCCTCCTGCCTCAGTCACCCACATGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | GTGTTATTACTCCAAGTCTCCCTCTTTCCTGGCCAGTaGAAGGTGAGGTTCCTGAGCAAGAGAGAAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: VLLLQVSLFPGQ*KVRFLSKRERS Trigger: GCTCCTTTCTCTCTTGCTCAGGAACCTCACCTTTCACTGGCCAGGAAAGAGGGAGACTTGGAGTAATAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 72 bp | GAGTGTAAGACTCACACACAGCAGCATAACCCACTCTaGGATCAGAGGGATGCAGGAATTATCCACAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ECKTHTQQHNPL*DQRDAGIIHRK Trigger: CTTCCTGTGGATAATTCCTGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAGTCTTACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAATACAACAGGGGCTGAGGAGGAAAAAGCTGAGACTAAGAAGAGAAGGAACTGTCCAGCCAGTCTaGCCTAAACAGCAAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SRIQQGLRRKKLRLRREGTVQPV*PKQQAP Trigger: TGGAGCTTGCTGTTTAGGCAAGACTGGCTGGACAGT...TCCTTCTCTTCTTAGTCTCAGCTTTTTCCTCCTCAGCCCCTGTTGTATTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR CCA 72 bp | CTATTCAACAAGGCCACACCTCCTAATTGTGCCCTATaGGGGCCATTTTTATTCAAACCACCATACCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFNKATPPNCAL*GPFLFKPPYPV Trigger: CACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCACAATTAGGAGGTGTGGCCTTGTTGAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAGTCCCGGGTCTCTTATaGCAAAGTCAGATGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: LCPMGAIFIQTTIPCVRIVPGLL*QSQMMS Trigger: TGACATCATCTGACTTTGCAATAAGAGACCCGGGAC...TATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | TGTGGGCACTGCATGCACATGGTGTGTAGGCATAGATaGAGGCACTCGTACACACAAAGAAAAGAAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: CGHCMHMVCRHR*RHSYTQRKENK Trigger: CTTATTTTCTTTTCTTTGTGTGTACGAGTGCCTGCATCTATGCCTACACACCATGTGCATGCAGTGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATAATTCATGGGCAAGGGCCTaGGCACACACATGTGTATAT | + |
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Preference number: 3 (lower is better) Translates to: PYGGHFYSNHHTLCQNNNSWARA*AHTCVY Trigger: ATATACACATGTGTGTGCCAAGGCCCTTGCCCATGA...ATTATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | ACCAAAAATAGAGGGAACAACTTGTGGGGATATAAATaGAGGAGCACAGACTCTGTCCCGGGTCTCTTATTG | + |
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Preference number: 3 (lower is better) Translates to: TKNRGNNLWGYK*RSTDSVPGLLL Trigger: CAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCCCTCTATTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| 3UTR CCA 72 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATaGGCAAGGGCCTTGGCACACACATGTGTATATTCA | + |
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Preference number: 3 (lower is better) Translates to: TLTSSLHTCTYS*ARALAHTCVYS Trigger: TGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | TGGAGTCCAGAACTGGGCATTAGATCACTTGAAAATTaGGTTAGAGATGGTTGTGAGCTGTCTGTAGGAGTA | + |
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Preference number: 3 (lower is better) Translates to: WSPELGIRSLEN*VRDGCELSVGV Trigger: TACTCCTACAGACAGCTCACAACCATCTCTAACTCAATTTTCAAGTGATCTAATGCCCAGTTCTGGACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | GCAAGGCCAGAGGGACAAGTCTCAGGATTCGATTCCTaGTATCAATACACCTTTCCTGTCATTATTAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: ARPEGQVSGFDS*YQYTFPVIIKL Trigger: TAACTTAATAATGACAGGAAAGGTGTATTGATAGCAGGAATCGAATCCTGAGACTTGTCCCTCTGGCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | CCAGAAAGAAAGTCCACAACAGATCTAAGCAACAAATaGACCAATGCCCAATTTTGTGAATCAATGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PERKSTTDLSNK*TNAQFCESMSV Trigger: AACACTCATTGATTCACAAAATTGGGCATTGGTGCATTTGTTGCTTAGATCTGTTGTGGACTTTCTTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR TCA 72 bp | GGATATTCTACAAAAACATTACATGCTCTTAACCAGTaGGCCATGTGGGATGTTAAGAAGAAAACTCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: GYSTKTLHALNQ*AMWDVKKKTLS Trigger: TGAAAGAGTTTTCTTCTTAACATCCCACATGGCTCACTGGTTAAGAGCATGTAATGTTTTTGTAGAATATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| 3UTR GCA 72 bp | AAAGCAATTACAATAAAATCAGGGAAAAGGCAAGACTaGCCAGTCTCTCCATACCTATTCAATATAGTACTT | + |
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Preference number: 3 (lower is better) Translates to: KAITIKSGKRQD*PVSPYLFNIVL Trigger: AAGTACTATATTGAATAGGTATGGAGAGACTGGGCAGTCTTGCCTTTTCCCTGATTTTATTGTAATTGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAGTGGCACACTTTCTCCAACTAGGCCACACCTATTCAACAAGGCCATCTGCACTAGTTGTCTaGGGTCACTTGTGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: PAPVAHFLQLGHTYSTRPSALVV*GHLWPL Trigger: CAGTGGCCACAAGTGACCCCAGACAACTAGTGCAGA...TGGCCTTGTTGAATAGGTGTGGCCTAGTTGGAGAAAGTGTGCCACTGGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| CDS-3UTR GCA 90 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCACTGAGCCAGGGAGCCTaGACACAGCAAGAACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLTSSLHTCTYSWARALALSQGA*TQQEQR Trigger: CCGCTGTTCTTGCTGTGTGCAGGCTCCCTGGCTCAG...TGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CCA 90 bp | CCAGTGGCACACTTTCTCCAACTAGGCCACACCTATTCAACAAGGCCACACCTCGTCTGGGGTCACTTGTaGCCACTGGAGAGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PVAHFLQLGHTYSTRPHLVWGHL*PLESLH Trigger: ATGAAGACTCTCCAGTGGCCACAAGTGACCCCAGAC...GAGGTGTGGCCTTGTTGAATAGGTGTGGCCTAGTTGGAGAAAGTGTGCCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTGCACGGAGGAGTCTGTaGTTCGGGAACTCAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSARRSL*FGNSRR Trigger: CCTCCTTGAGTTCCCGAACCACAGACTCCTCCGTGC...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS-3UTR CCA 90 bp | CCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGCACGGAGGAGTCTGTaGTTCGGGAACTCAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLAFIHVLTHGQGPWHTHARRSL*FGNSRR Trigger: CCTCCTTGAGTTCCCGAACCACAGACTCCTCCGTGC...ATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR TCA 90 bp | GAGTGTAAGACTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCATGGAATTCTAAATCCTaGGCCAGGGAGCCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: ECKTHTQQHNPLWDQRDAWNSKS*AREPAH Trigger: GTGTGCAGGCTCCCTGGCTCAGGATTTAGAATTCCA...TGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAGTCTTACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR TCA 90 bp | CTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCAGGAATTATCCTGGAATTCTAAATCCTaGGCCAGGGAGCCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LTHSSITHSGIRGMQELSWNSKS*AREPAH Trigger: GTGTGCAGGCTCCCTGGCTCAGGATTTAGAATTCCA...GGATAATTCCTGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR GCA 90 bp | CTCACTGTCCAGCCAGTCTTGCCTAAACAGCAAGCTCCAGGCTCAGGGAGAGCTTTTTCACAGCCCATGTaGACTGACAGCTTTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LTVQPVLPKQQAPGSGRAFSQPM*TDSFVV Trigger: GACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAA...AGCTCTCCCTGAGCCTGGAGCTTGCTGTTTAGGCAAGACTGGCTGGACAGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCTGGTCCTTTCCACAGTaGCACCTGCTCCAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TCGDINEGAQTLSRVSYCWSFPQ*HLLQRR Trigger: CCTTCTCTGGAGCAGGTGTCACTGTGGAAAGGACCA...GCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS-3UTR TCA 90 bp | CTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCAGGAATTATCCACACTGCTCTGTTCCTaGGGTGAGTCCTTCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LTHSSITHSGIRGMQELSTLLCS*GESFCK Trigger: CTTACAGAAGGACTCACCTCAGGAACAGAGCAGTGT...GGATAATTCCTGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR TCA 90 bp | GAGTGTAAGACTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCAACACTGCTCTGTTCCTaGGGTGAGTCCTTCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: ECKTHTQQHNPLWDQRDATLLCS*GESFCK Trigger: CTTACAGAAGGACTCACCTCAGGAACAGAGCAGTGT...TGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAGTCTTACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR GCA 90 bp | GTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATCTGAGCCAGGGAGCCTaGACACAGCAAGAACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VPYGGHFYSNHHTLCQNNLSQGA*TQQEQR Trigger: CCGCTGTTCTTGCTGTGTGCAGGCTCCCTGGCTCAG...ATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR GCA 90 bp | TTGTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATACTGAGCCAGGGAGCCTaGACACAGCAAGAACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LCPMGAIFIQTTIPCVRILSQGA*TQQEQR Trigger: CCGCTGTTCTTGCTGTGTGCAGGCTCCCTGGCTCAG...TATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR GCA 90 bp | GAGTGTAAGACTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCACAAGGAGTTGGAATCTaGCCTGTGTTGCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ECKTHTQQHNPLWDQRDAQGVGI*PVLPSA Trigger: TGCAGAAGGCAACACAGGGCAGATTCCAACTCCTTG...TGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAGTCTTACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTCTGCACTAGTTGTCTaGGGTCACTTGTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSSALVV*GHLWPL Trigger: CAGTGGCCACAAGTGACCCCAGACAACTAGTGCAGA...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTGATTGCTGTGCACCTTaGAGTCCTGCTGATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSDCCAP*SPADEP Trigger: AGGCTCATCAGCAGGACTCCAAGGTGCACAGCAATC...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATGCAGGAATTATCCACAGGAAGCCATAGAGGACACAGGTTCTTCACAAGGTCACCAAGCAGGTaGGTTTGGTACCATGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGMQELSTGSHRGHRFFTRSPSR*VWYHGP Trigger: AGGACCATGGTACCAAACTCACCTGCTTGGTGACCT...TGTGAAGAACCTGTGTCCTCTATGGCTTCCTGTGGATAATTCCTGCATCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | ACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGGTCCTTTCCACAGTaGCACCTGCTCCAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTCGDINEGAQTLSRVSYWSFPQ*HLLQRR Trigger: CCTTCTCTGGAGCAGGTGTCACTGTGGAAAGGACCA...ATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
||
| CDS-3UTR GCA 90 bp | CTCACACACAGCAGCATAACCCACTCTGGGATCAGAGGGATGCAGGAATTATCCAGGGGTAGAAAACACTaGAGGGCACATGGACACATA | + |
|
Preference number: 4 (lower is better) Translates to: LTHSSITHSGIRGMQELSRGRKH*RAHGHI Trigger: TATGTGTCCATGTGCCCTGCAGTGTTTTCTACCCCT...GGATAATTCCTGCATCCCTCTGATCCCAGAGTGGGTTATGCTGCTGTGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTCAAGGAGTTGGAATCTaGCCTGTGTTGCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSQGVGI*PVLPSA Trigger: TGCAGAAGGCAACACAGGGCAGATTCCAACTCCTTG...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | CTCACTGTCCAGCCAGTCTTGCCTAAACAGCAAGCTCCAGGCTCAGGGAGAGCTTGTGTCATTTTTCTGTaGATCTCTGATGAACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTVQPVLPKQQAPGSGRACVIFL*ISDEQG Trigger: TCCCTGTTCATCAGAGATGCACAGAAAAATGACACA...AGCTCTCCCTGAGCCTGGAGCTTGCTGTTTAGGCAAGACTGGCTGGACAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTGATTGCTGTGCACCTTaGAGTCCTGCTGATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSDCCAP*SPADEH Trigger: ATGCTCATCAGCAGGACTCCAAGGTGCACAGCAATC...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206371.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCGDINEGAQTLSRVSYCTAHVH*QLCCLP Trigger: AGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGT...GCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | GGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCACACTGCTCTGTTCCTaGGGTGAGTCCTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDINEGAQTLSRVSYCKVTLLCS*GESFCK Trigger: CTTACAGAAGGACTCACCTCAGGAACAGAGCAGTGT...GACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
||
| CDS-3UTR GCA 90 bp | GGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCCAAGGAGTTGGAATCTaGCCTGTGTTGCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDINEGAQTLSRVSYCKVQGVGI*PVLPSA Trigger: TGCAGAAGGCAACACAGGGCAGATTCCAACTCCTTG...GACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTACAGTCATGTTTCTGTaGGTCCCCAAGGAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSTVMFL*VPKELE Trigger: TTCCAACTCCTTGGGGACCCACAGAAACATGACTGT...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCAACCAGCTCTCTCATCTaGCCTGATTTCCGGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLTSSLHTCTYSWARALATSSLI*PDFRVT Trigger: TGTTACCCGGAAATCAGGCCAGATGAGAGAGCTGGT...TGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | GGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCACCAGCTCTCTCATCTaGCCTGATTTCCGGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GDINEGAQTLSRVSYCKVTSSLI*PDFRVT Trigger: TGTTACCCGGAAATCAGGCCAGATGAGAGAGCTGGT...GACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTGTGTATGGAACATCCTaGAGTCACAGCATCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GTTCGDINEGAQTLSRVSVYGTS*SHSIRC Trigger: GCATCTGATGCTGTGACTCCAGGATGTTCCATACAC...AGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGTTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
||
| CDS-3UTR TCA 90 bp | TACATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCTGGAATTCTAAATCCTaGGCCAGGGAGCCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YMYLLMGKGLGTHMCIFIWNSKS*AREPAH Trigger: GTGTGCAGGCTCCCTGGCTCAGGATTTAGAATTCCA...GATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAAGGTCACCAAGCAGGTaGGTTTGGTACCATGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCPMGAIFIQTTIPCVRIRSPSR*VWYHGP Trigger: AGGACCATGGTACCAAACTCACCTGCTTGGTGACCT...TATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCAAGGGGTAGAAAACACTaGAGGGCACATGGACACATA | + |
|
Preference number: 4 (lower is better) Translates to: TLTSSLHTCTYSWARALARGRKH*RAHGHI Trigger: TATGTGTCCATGTGCCCTGCAGTGTTTTCTACCCCT...TGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCCTGGGATCAGAGGGATaGAGGAATTATCCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCGDINEGAQTLSRVSYCLGSEG*RNYPQE Trigger: TTCCTGTGGATAATTCCTGCATCCCTCTGATCCCAG...GCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000206371.2 |
||
| CDS-3UTR CCA 90 bp | ATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCCATGTCTGGGGTCACTTGTaGCCACTGGAGAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MYLLMGKGLGTHMCIFIHVWGHL*PLESLH Trigger: ATGAAGACTCTCCAGTGGCCACAAGTGACCCCAGAC...ATGGATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | TACATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCTCTGCACTAGTTGTCTaGGGTCACTTGTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: YMYLLMGKGLGTHMCIFISALVV*GHLWPL Trigger: CAGTGGCCACAAGTGACCCCAGACAACTAGTGCAGA...GATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCACAGTCATGTTTCTGTaGGTCCCCAAGGAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCGDINEGAQTLSRVSYCTVMFL*VPKELE Trigger: TTCCAACTCCTTGGGGACCCACAGAAACATGACTGT...GCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | CCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATAATGCACGGAGGAGTCTGTaGTTCGGGAACTCAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYGGHFYSNHHTLCQNNNARRSL*FGNSRR Trigger: CCTCCTTGAGTTCCCGAACCACAGACTCCTCCGTGC...ATTATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | TTATTGCAAAGTCAGATGATGTCAACTGAGTGTAAGACTCACACACAGCAGCATTGGTCCTTTCCACAGTaGCACCTGCTCCAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQSQMMSTECKTHTQQHWSFPQ*HLLQRR Trigger: CCTTCTCTGGAGCAGGTGTCACTGTGGAAAGGACCA...ATGCTGCTGTGTGTGAGTCTTACACTCAGTTGACATCATCTGACTTTGCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTTCAATTTCTGGATTGGCAGACATCAGGAAATAAAGTGACACTGGGCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVQFLDWQTSGNKVTLGTAHVH*QLCCLP Trigger: AGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGT...GCCCAGTGTCACTTTATTTCCTGATGTCTGCCAATCCAGAAATTGAACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTTCAATTTCTGGATTGGCAGACATCAGGAAATAAAGTGACACTGGGCACACTGCTCTGTTCCTaGGGTGAGTCCTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVQFLDWQTSGNKVTLGTLLCS*GESFCK Trigger: CTTACAGAAGGACTCACCTCAGGAACAGAGCAGTGT...GCCCAGTGTCACTTTATTTCCTGATGTCTGCCAATCCAGAAATTGAACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | CAGCATAACCCACTCTGGGATCAGAGGGATGCAGGAATTATCCACAGGAAGCCATGTGTCATTTTTCTGTaGATCTCTGATGAACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHNPLWDQRDAGIIHRKPCVIFL*ISDEQG Trigger: TCCCTGTTCATCAGAGATGCACAGAAAAATGACACA...TGGCTTCCTGTGGATAATTCCTGCATCCCTCTGATCCCAGAGTGGGTTATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGATGCAGGAATTATCCACAGGAAGCCATAGAGGACACAGGTTCTTCACATTTTCACAGCCCATGTaGACTGACAGCTTTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGMQELSTGSHRGHRFFTFSQPM*TDSFVV Trigger: GACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAA...TGTGAAGAACCTGTGTCCTCTATGGCTTCCTGTGGATAATTCCTGCATCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | ATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCCATCTGGGATCAGAGGGATaGAGGAATTATCCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYLLMGKGLGTHMCIFIHLGSEG*RNYPQE Trigger: TTCCTGTGGATAATTCCTGCATCCCTCTGATCCCAG...ATGGATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
||
| CDS-3UTR CCA 90 bp | ATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCCATACAGTCATGTTTCTGTaGGTCCCCAAGGAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYLLMGKGLGTHMCIFIHTVMFL*VPKELE Trigger: TTCCAACTCCTTGGGGACCCACAGAAACATGACTGT...ATGGATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| 3UTR CAA 72 bp | GGTGCCTATGGAGTCCAGAACTGGGCATTAGATCACTaGAAAATTGAGTTAGAGATGGTTGTGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAYGVQNWALDH*KIELEMVVSCL Trigger: CAGACAGCTCACAACCATCTCTAACTCAATTTTCAAGTGATCTAATGCCCAGTTCTGGACTCCATAGGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | TACATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATGTGTATATTCATCTTTTCACAGCCCATGTaGACTGACAGCTTTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YMYLLMGKGLGTHMCIFIFSQPM*TDSFVV Trigger: GACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAA...GATGAATATACACATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CCA 90 bp | CACAGTAAAAATGGACACCTTACCAAAAACAATCTACAGATTCAATGTGATCCCGATTGCTGTGCACCTTaGAGTCCTGCTGATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSKNGHLTKNNLQIQCDPDCCAP*SPADEP Trigger: AGGCTCATCAGCAGGACTCCAAGGTGCACAGCAATC...GGGATCACATTGAATCTGTAGATTGTTTTTGGTAAGGTGTCCATTTTTACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTAAAAATGGACACCTTACCAAAAACAATCTACAGATTCAATGTGATCCCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSKNGHLTKNNLQIQCDPTAHVH*QLCCLP Trigger: AGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGT...GGGATCACATTGAATCTGTAGATTGTTTTTGGTAAGGTGTCCATTTTTACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAGTCAGATGATGTCAACTGAGTGTAAGACTCACACACAGCAGCATAACTGTGTCATTTTTCTGTaGATCTCTGATGAACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQMMSTECKTHTQQHNCVIFL*ISDEQG Trigger: TCCCTGTTCATCAGAGATGCACAGAAAAATGACACA...GTTATGCTGCTGTGTGTGAGTCTTACACTCAGTTGACATCATCTGACTTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| 3UTR CAA 72 bp | ATTTTAGGCCAATTCATGCGGGTAACAGAAACCAACTaGGATATTCTACAAAAACATTACATGCTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: ILGQFMRVTETN*DILQKHYMLLT Trigger: GGTTAAGAGCATGTAATGTTTTTGTAGAATATCCAAGTTGGTTTCTGTTACCCGCATGAATTGGCCTAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205503.2 |
||
| CDS TCA 90 bp | TCGACTGTCACTGACTCGGGCGCCACCAGCTGGAATTCTAAATCCTaGGCCAGGGAGCCTGCACACAGCAAGAACAGCGGCAGTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: STVTDSGATSWNSKS*AREPAHSKNSGSGH Trigger: GTGGCCACTGCCGCTGTTCTTGCTGTGTGCAGGCTCCCTGGCTCAGGATTTAGAATTCCAGCTGGTGGCGCCCGAGTCAGTGACAGTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS TCA 90 bp | CGTTGCCTCCCCCACAGCCACCAGGACCAGCTCTCTCATCTGGCCTaGTTTCCGGGTAACATTGAGCTGGATGGTCCTTTCCACAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLPHSHQDQLSHLA*FPGNIELDGPFHSD Trigger: GTCACTGTGGAAAGGACCATCCAGCTCAATGTTACCCGGAAATCAGGCCAGATGAGAGAGCTGGTCCTGGTGGCTGTGGGGGAGGCAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTGTCCAGCCAGTCTTGCCTAAACAGCAAGCTCCAGGCTCAGGGAGAGCTCCAAGAATCAGGAGCTaGACCGTTGCCTCCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTVQPVLPKQQAPGSGRAPRIRS*TVASPT Trigger: TGTGGGGGAGGCAACGGTCAAGCTCCTGATTCTTGG...AGCTCTCCCTGAGCCTGGAGCTTGCTGTTTAGGCAAGACTGGCTGGACAGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
||
| CDS GCA 90 bp | GTTCCTGAGGTGAGTCCTTCTGTAAGGGTCTTGGATTCTCAGGATTaGTGTGCACCTTGGAGTCCTGCTGATGAGCATGAGAAACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPEVSPSVRVLDSQD*CAPWSPADEHEKHE Trigger: CTCGTGTTTCTCATGCTCATCAGCAGGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAGACCCTTACAGAAGGACTCACCTCAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206371.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGATGCAGGAATTATCCACAGGAAGCCATAGAGGACACAGGTTCTTCACAGGGAATCTGCCCTGTGTaGCCTTCTGCACTAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGCRNYPQEAIEDTGSSQGICPV*PSALVV Trigger: GACAACTAGTGCAGAAGGCAACACAGGGCAGATTCC...CTGTGAAGAACCTGTGTCCTCTATGGCTTCCTGTGGATAATTCCTGCATCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGCACACTTTCTCCAACTAGGCCACACCTATTCAACAAGGCCACACCTCTGTGCACTGACAGCTTaGTTGTCTTCCTTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVAHFLQLGHTYSTRPHLCALTA*LSSFCR Trigger: TCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACA...GAGGTGTGGCCTTGTTGAATAGGTGTGGCCTAGTTGGAGAAAGTGTGCCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004728.12 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | GGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCGGAATCTGCCCTGTGTaGCCTTCTGCACTAGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: GDINEGAQTLSRVSYCKVGICPV*PSALVV Trigger: GACAACTAGTGCAGAAGGCAACACAGGGCAGATTCC...GACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATCCAAGAATCAGGAGCTaGACCGTTGCCTCCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: VPYGGHFYSNHHTLCQNNPRIRS*TVASPT Trigger: TGTGGGGGAGGCAACGGTCAAGCTCCTGATTCTTGG...ATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCACTTGGATTCTCAGGATaGCTGTGCACCTTGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: TLTSSLHTCTYSWARALALGFSG*LCTLES Trigger: GGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAG...TGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGATGCAGGAATTATCCACAGGAAGCCATAGAGGACACAGGTTCTTCACACTTGGATTCTCAGGATaGCTGTGCACCTTGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: RGMQELSTGSHRGHRFFTLGFSG*LCTLES Trigger: GGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAG...TGTGAAGAACCTGTGTCCTCTATGGCTTCCTGTGGATAATTCCTGCATCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | GGGGATATAAATGAAGGAGCACAGACTCTGTCCCGGGTCTCTTATTGCAAAGTCCTTGGATTCTCAGGATaGCTGTGCACCTTGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: GDINEGAQTLSRVSYCKVLGFSG*LCTLES Trigger: GGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAG...GACTTTGCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS-3UTR CAA 90 bp | CCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCACACACATTGTGCACTGACAGCTTaGTTGTCTTCCTTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PLAFIHVLTHGQGPWHTHCALTA*LSSFCR Trigger: TCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACA...ATGTGTGTGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATGGAATCTGCCCTGTGTaGCCTTCTGCACTAGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: VPYGGHFYSNHHTLCQNNGICPV*PSALVV Trigger: GACAACTAGTGCAGAAGGCAACACAGGGCAGATTCC...ATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGACCTCTAGCCTTCATACATGTACTTACTCATGGGCAAGGGCCTTGGCAGCACTGACAGCTTTGTaGTCTTCCTTCTGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TLTSSLHTCTYSWARALAALTAL*SSFCRT Trigger: TGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGC...TGCCAAGGCCCTTGCCCATGAGTAAGTACATGTATGAAGGCTAGAGGTCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS GCA 90 bp | GATGTGATCGCTTCCTGCCTCTTGATAGGATTTTCACAGCCCATGTaGACTGACAGCTTTGTTGTCTTCCTTCTGCAGAACATCACAATG | + |
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Preference number: 5 (lower is better) Translates to: DVIASCLLIGFSQPM*TDSFVVFLLQNITM Trigger: CATTGTGATGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAATCCTATCAAGAGGCAGGAAGCGATCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
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| CDS TCA 90 bp | GATCGCTTCCTGCCTCTTGATAGGATTTTCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCTTCTGCAGAACATCACAATGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: DRFLPLDRIFTAHVH*QLCCLPSAEHHNEK Trigger: TTTCTCATTGTGATGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAATCCTATCAAGAGGCAGGAAGCGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
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| CDS TCA 90 bp | GTCCTGCTGATGAGCCTTGATAGGATTTTCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCTTCTGCAGAACATCACAATGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VLLMSLDRIFTAHVH*QLCCLPSAEHHNEK Trigger: TTTCTCATTGTGATGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAATCCTATCAAGGCTCATCAGCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | TTATTGCAAAGTCAGATGATGTCAACTGAGTGTAAGACTCACACACAGCAGCATCTTGGATTCTCAGGATaGCTGTGCACCTTGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLQSQMMSTECKTHTQQHLGFSG*LCTLES Trigger: GGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAG...ATGCTGCTGTGTGTGAGTCTTACACTCAGTTGACATCATCTGACTTTGCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | CCCTATGGGGGCCATTTTTATTCAAACCACCATACCCTGTGTCAGAATAATAATGCACTGACAGCTTTGTaGTCTTCCTTCTGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: PYGGHFYSNHHTLCQNNNALTAL*SSFCRT Trigger: TGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGC...ATTATTATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS-3UTR CAA 90 bp | TTATTGCAAAGTCAGATGATGTCAACTGAGTGTAAGACTCACACACAGCAGCATTGTGCACTGACAGCTTaGTTGTCTTCCTTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLQSQMMSTECKTHTQQHCALTA*LSSFCR Trigger: TCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACA...ATGCTGCTGTGTGTGAGTCTTACACTCAGTTGACATCATCTGACTTTGCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS TCA 72 bp | ACTGACTCGGGCGCCACCAGCTGGAATTCTAAATCCTaGGCCAGGGAGCCTGCACACAGCAAGAACAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TDSGATSWNSKS*AREPAHSKNSG Trigger: GCCGCTGTTCTTGCTGTGTGCAGGCTCCCTGGCTCAGGATTTAGAATTCCAGCTGGTGGCGCCCGAGTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS CCA 72 bp | GCCTCCCCCACAGCCACCAGGACCAGCTCTCTCATCTaGCCTGATTTCCGGGTAACATTGAGCTGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: ASPTATRTSSLI*PDFRVTLSWMV Trigger: GACCATCCAGCTCAATGTTACCCGGAAATCAGGCCAGATGAGAGAGCTGGTCCTGGTGGCTGTGGGGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS TCA 72 bp | CCCCACAGCCACCAGGACCAGCTCTCTCATCTGGCCTaGTTTCCGGGTAACATTGAGCTGGATGGTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PHSHQDQLSHLA*FPGNIELDGPF Trigger: GAAAGGACCATCCAGCTCAATGTTACCCGGAAATCAGGCCAGATGAGAGAGCTGGTCCTGGTGGCTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS GCA 72 bp | GTGAGTCCTTCTGTAAGGGTCTTGGATTCTCAGGATTaGTGTGCACCTTGGAGTCCTGCTGATGAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSPSVRVLDSQD*CAPWSPADEPV Trigger: CACAGGCTCATCAGCAGGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAGACCCTTACAGAAGGACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
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| CDS GCA 72 bp | GTGAGTCCTTCTGTAAGGGTCTTGGATTCTCAGGATTaGTGTGCACCTTGGAGTCCTGCTGATGAGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: VSPSVRVLDSQD*CAPWSPADEHE Trigger: CTCATGCTCATCAGCAGGACTCCAAGGTGCACAGCAATCCTGAGAATCCAAGACCCTTACAGAAGGACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206371.2 |
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| CDS TCA 72 bp | CTGCCTCTTGATAGGATTTTCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCTTCTGCAGAACATCAC | + |
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Preference number: 6 (lower is better) Translates to: LPLDRIFTAHVH*QLCCLPSAEHH Trigger: GTGATGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAATCCTATCAAGAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004728.12 |
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| CDS TCA 72 bp | TCCAAGGAAATCTTAGTGTGGACACTGCTCTGTTCCTaGGGTGAGTCCTTCTGTAAGGGTCTTGGATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SKEILVWTLLCS*GESFCKGLGFS Trigger: TGAGAATCCAAGACCCTTACAGAAGGACTCACCTCAGGAACAGAGCAGTGTCCACACTAAGATTTCCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 ENSMUST00000206371.2 |
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| CDS TCA 72 bp | ATGAGCCTTGATAGGATTTTCACAGCCCATGTGCACTaGCAGCTTTGTTGTCTTCCTTCTGCAGAACATCAC | + |
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Preference number: 6 (lower is better) Translates to: MSLDRIFTAHVH*QLCCLPSAEHH Trigger: GTGATGTTCTGCAGAAGGAAGACAACAAAGCTGTCAGTGCACATGGGCTGTGAAAATCCTATCAAGGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039861.7 ENSMUST00000205503.2 |
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| CDS GCA 72 bp | CACTCTGAAGAAGTACATTCCTGTGTCATTTTTCTGTaGATCTCTGATGAACAGGGAACAGTCATGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HSEEVHSCVIFL*ISDEQGTVMFL Trigger: CAGAAACATGACTGTTCCCTGTTCATCAGAGATGCACAGAAAAATGACACAGGAATGTACTTCTTCAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004728.12 ENSMUST00000039861.7 ENSMUST00000205503.2 |
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