Pregenerated sensors for CD320 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002308Ensembl transcript IDs: ENSMUST00000002379.15, ENSMUST00000087559.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAATCAAAGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTaGGAAGCCAGAAGCTCCTTGCGTGTTTCACGGCTCCTTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KNQSSLCSKEPRSQS*EARSSLRVSRLLCP Trigger: GGGACAAAGGAGCCGTGAAACACGCAAGGAGCTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACTTTGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR TCA 90 bp | GGGAAGAAAGGAAATAAGGTCTCCCTGAATAGCACAGACATTCCTTaGACTCCAGCTCTTCAGGCCTCAACCTCCCCAGTGCTAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: GKKGNKVSLNSTDIP*TPALQASTSPVLEL Trigger: TAATTCTAGCACTGGGGAGGTTGAGGCCTGAAGAGCTGGAGTTCAAGGAATGTCTGTGCTATTCAGGGAGACCTTATTTCCTTTCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR TCA 90 bp | ACATCAACCAACTGCATCTGGGGAAGAAAGGAAATAAGGTCTCCCTaGATAGCACAGACATTCCTTGAACTCCAGCTCTTCAGGCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TSTNCIWGRKEIRSP*IAQTFLELQLFRPQ Trigger: TTGAGGCCTGAAGAGCTGGAGTTCAAGGAATGTCTGTGCTATTCAGGGAGACCTTATTTCCTTTCTTCCCCAGATGCAGTTGGTTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGGGCTTCAGTTATGACATGGGGACAGCCCTTCCCTACCTCCCGGGGCTATTCTTGAGAGCGTCCTaGGGCCAGCCCCTCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ILGFSYDMGTALPYLPGLFLRAS*GQPLSP Trigger: AGGACTGAGGGGCTGGCCCCAGGACGCTCTCAAGAA...TAGCCCCGGGAGGTAGGGAAGGGCTGTCCCCATGTCATAACTGAAGCCCAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | ATCTTGGGCTTCAGTTATGACATGGGGACAGCCCTTCCCTACCTCCCGGGGCTATCCTTTGTCCCAGTCTaGCTGCACTCAGGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ILGFSYDMGTALPYLPGLSFVPV*LHSGPG Trigger: ACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGA...TAGCCCCGGGAGGTAGGGAAGGGCTGTCCCCATGTCATAACTGAAGCCCAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTTTGTCCCAGTCTGACTaGACTCAGGGCCAGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: AWRLLGARDTRKASPLPVLSQSD*TQGQVV Trigger: TACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAA...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTGCTTCAGTTATGACATaGGGACAGCCCTTCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: AWRLLGARDTRKASPLPVASVMT*GQPFPT Trigger: GGTAGGGAAGGGCTGTCCCCATGTCATAACTGAAGC...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTAGGCAGACAGAGGGGTaGAGAAACTTTAATAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AWRLLGARDTRKASPLPVRQTEG*RNFNSH Trigger: GTGGCTATTAAAGTTTCTTCACCCCTCTGTCTGCCT...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | CATGGGGACAGCCCTTCCCTACCTCCCGGGGCTAACTCATTGCTAGACAGTAAACACAGACCTCTTGGCTaGAGACTCCCTTTTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HGDSPSLPPGANSLLDSKHRPLG*RLPFKR Trigger: CCTTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTG...TTTACTGTCTAGCAATGAGTTAGCCCCGGGAGGTAGGGAAGGGCTGTCCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTTTGTCCCAGTCTGACTaGACTCAGGGCCAGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: IATHQCEQQECLNHSSPILSQSD*TQGQVV Trigger: TACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAA...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGAGGGGTGAAGAAACTTTAATAGCCACCCATCAATGTGAGCAGCAGGAGCCAGCCCCTCAGTCCTaGCTATGGCAAGTTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RQRGEETLIATHQCEQQEPAPQS*LWQVSS Trigger: GCTGGAAACTTGCCATAGCCAGGACTGAGGGGCTGG...CTCCTGCTGCTCACATTGATGGGTGGCTATTAAAGTTTCTTCACCCCTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR CCA 90 bp | CATGGGGACAGCCCTTCCCTACCTCCCGGGGCTAACTCATTGCTAGACAGTAAATCAACCAACTGCATCTaGGGAAGAAAGGAAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: HGDSPSLPPGANSLLDSKSTNCI*GRKEIR Trigger: CCTTATTTCCTTTCTTCCCCAGATGCAGTTGGTTGA...TTTACTGTCTAGCAATGAGTTAGCCCCGGGAGGTAGGGAAGGGCTGTCCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR CAA 90 bp | CCTGTTGGAGGCATTCTAACAGTCCCCACCATTTTACTTAGGAATTaGAGAGTCTGGGAAGAGCTCTGGCCTTGTTACTCAGAAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PVGGILTVPTILLRN*RVWEELWPCYSEVK Trigger: CTTGACTTCTGAGTAACAAGGCCAGAGCTCTTCCCAGACTCTCAAATTCCTAAGTAAAATGGTGGGGACTGTTAGAATGCCTCCAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAGGGGTGAAGAAACTTTAATAGCCACCCATCAATGTGAGCAGCAGGAGAATCAAAGTTCTCTGTaGTCCAAAGAGCCCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RQRGEETLIATHQCEQQENQSSL*SKEPRS Trigger: AGACCTGGGCTCTTTGGAGCACAGAGAACTTTGATT...CTCCTGCTGCTCACATTGATGGGTGGCTATTAAAGTTTCTTCACCCCTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCATAAAACATCAACCAACTGCATCTGGGGAAGAAAGGAAATAAGGTCTAGCACAGACATTCCTTaGACTCCAGCTCTTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSHKTSTNCIWGRKEIRSSTDIP*TPALQA Trigger: GGCCTGAAGAGCTGGAGTTCAAGGAATGTCTGTGCT...AGACCTTATTTCCTTTCTTCCCCAGATGCAGTTGGTTGATGTTTTATGAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAACAGAACTGTCTCATAAAACATCAACCAACTGCATCTGGGGAAGAAAGTCTCCCCTTCCCAACTaGTGGGATTATAGCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PRTELSHKTSTNCIWGRKSPLPN*WDYSPE Trigger: TTCAGGGCTATAATCCCAGCAGTTGGGAAGGGGAGA...CTTTCTTCCCCAGATGCAGTTGGTTGATGTTTTATGAGACAGTTCTGTTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCATAAAACATCAACCAACTGCATCTGGGGAAGAAAGGAAATAAGGTCTAGCCACCCATCAATGTaGGCAGCAGGAGTGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LSHKTSTNCIWGRKEIRSSHPSM*AAGVSK Trigger: TTTAGACACTCCTGCTGCTCACATTGATGGGTGGCT...AGACCTTATTTCCTTTCTTCCCCAGATGCAGTTGGTTGATGTTTTATGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR TCA 90 bp | CCTAGAACAGAACTGTCTCATAAAACATCAACCAACTGCATCTGGGGAAGAAAGGAAATAAGGTCTCCCTaGATAGCACAGACATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PRTELSHKTSTNCIWGRKEIRSP*IAQTFL Trigger: AAGGAATGTCTGTGCTATTCAGGGAGACCTTATTTC...CTTTCTTCCCCAGATGCAGTTGGTTGATGTTTTATGAGACAGTTCTGTTCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR CCA 72 bp | TTTCTTGAGAGCGTCCTGGGGCCAGCCCCTCAGTCCTaGCTATGGCAAGTTTCCAGCCAAGCTCACCACATA | + |
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Preference number: 3 (lower is better) Translates to: FLESVLGPAPQS*LWQVSSQAHHI Trigger: TATGTGGTGAGCTTGGCTGGAAACTTGCCATAGCCAGGACTGAGGGGCTGGCCCCAGGACGCTCTCAAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR TCA 72 bp | AGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTaGGAAGCCAGAAGCTCCTTGCGTGTTTCACGGCTC | + |
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Preference number: 3 (lower is better) Translates to: SSLCSKEPRSQS*EARSSLRVSRL Trigger: GAGCCGTGAAACACGCAAGGAGCTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTCAGGACACAGACCTCTaGGCTGAAGACTCCCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: AWRLLGARDTRKASPLPVQDTDL*AEDSLL Trigger: TAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTG...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR CCA 72 bp | TGTACAGCCTCAGAGCTCCAATACTCATCATGGGCCTaGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: CTASELQYSSWA*RLLGARDTRKA Trigger: GGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGCCCATGATGAGTATTGGAGCTCTGAGGCTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR-3UTR CAA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTTGTTTCACGGCTCCTTaGTCCCAGTCTGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: IATHQCEQQECLNHSSPICFTAP*SQSDCT Trigger: AGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTCCATGTTCAGGTATCTaGGGCTTCAGTTATGACATG | + |
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Preference number: 3 (lower is better) Translates to: AWRLLGARDTRKASPLPVPCSGI*GFSYDM Trigger: CATGTCATAACTGAAGCCCAAGATACCTGAACATGG...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR TCA 72 bp | AACTGCATCTGGGGAAGAAAGGAAATAAGGTCTCCCTaGATAGCACAGACATTCCTTGAACTCCAGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: NCIWGRKEIRSP*IAQTFLELQLF Trigger: GAAGAGCTGGAGTTCAAGGAATGTCTGTGCTATTCAGGGAGACCTTATTTCCTTTCTTCCCCAGATGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR CCA 72 bp | ACAGTCCCCACCATTTTACTTAGGAATTTGAGAGTCTaGGAAGAGCTCTGGCCTTGTTACTCAGAAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: TVPTILLRNLRV*EELWPCYSEVK Trigger: CTTGACTTCTGAGTAACAAGGCCAGAGCTCTTCCCAGACTCTCAAATTCCTAAGTAAAATGGTGGGGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR GCA 72 bp | AGCTTCCATGTCACAGAAGAAGCCATGACAAAGGAATaGCCAATAAGGAAACATTACTTCAGGTCTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SFHVTEEAMTKE*PIRKHYFRSLL Trigger: GAGAAGAGACCTGAAGTAATGTTTCCTTATTGGGCATTCCTTTGTCATGGCTTCTTCTGTGACATGGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR TCA 90 bp | CTTGCGTGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGCAAGAAGGTACCGGGTaGCCAGCCCTGCGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LACFTAPLSQSDCTQGQVQEGTG*PALRGE Trigger: CTCACCACGCAGGGCTGGTCACCCGGTACCTTCTTG...CACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | TTGCGTGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGCCATCAGAGCAGTCCTaGTCCCCATCACAGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRVSRLLCPSLTALRARWPSEQS*SPSQRQ Trigger: CTGGCGCTGTGATGGGGACCAGGACTGCTCTGATGG...CCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | TTGCGTGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTGGCCGAAACCAGGATaGCACTCAACACCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRVSRLLCPSLTALRARWWPKPG*HSTPQQ Trigger: CTGCTGGGGTGTTGAGTGCCATCCTGGTTTCGGCCA...CCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTAACCCCGGGTGACCAGCCCTaGGTGGTGAGAGGTCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: CFTAPLSQSDCTQGQVVTPGDQP*VVRGQN Trigger: ATTTTGACCTCTCACCACGCAGGGCTGGTCACCCGG...GGTTACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | TGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTAACCTCAAGACAGTCTGGGTaGCCATCACAGCGCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: CFTAPLSQSDCTQGQVVTSRQSG*PSQRHV Trigger: CACGTGGCGCTGTGATGGCCACCCAGACTGTCTTGA...GGTTACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | TGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTAACCCCACTGGTAAGACACTaGAAGGTGTCTGTCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CFTAPLSQSDCTQGQVVTPLVRH*KVSVGQ Trigger: CTGCCCGACAGACACCTTCCAGTGTCTTACCAGTGG...GGTTACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| 3UTR CAA 72 bp | AGAAGCCAGAAGCTCCTTGCGTGTTTCACGGCTCCTTaGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RSQKLLACFTAP*SQSDCTQGQVV Trigger: TACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAAGGAGCTTCTGGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR TCA 90 bp | TTGCGTGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGCATCAGAGCAACCACTaGTGTTGTCACAGGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRVSRLLCPSLTALRARWHQSNH*CCHRSK Trigger: CTTGCTCCTGTGACAACATCAGTGGTTGCTCTGATG...CCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGGTTACTAGGAGCTAGAGATACCAGGAAGGCCTCTCCTCTGCCTGTTAGGAAGGGCAGACTGTaGTTGGCACTGCCCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: AWRLLGARDTRKASPLPVRKGRL*LALPIL Trigger: CAGAATGGGCAGTGCCAACCACAGTCTGCCCTTCCT...AACAGGCAGAGGAGAGGCCTTCCTGGTATCTCTAGCTCCTAGTAACCTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR TCA 90 bp | TGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTAACCTGGCACTGCCCATTCTaGGCACATGACTCAATCCTA | + |
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Preference number: 4 (lower is better) Translates to: CFTAPLSQSDCTQGQVVTWHCPF*AHDSIL Trigger: TAGGATTGAGTCATGTGCTCAGAATGGGCAGTGCCA...GGTTACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR TCA 90 bp | TTAAAAGGTAGAAGGAGATCCAGCCGAGACCATAGGCTGCCCAGGCCAAGGGAAGGAGGCGTAGCAATATaGGAAGGGTGGCCGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LKGRRRSSRDHRLPRPREGGVAI*EGWPKP Trigger: TGGTTTCGGCCACCCTTCTCATATTGCTACGCCTCC...TTCCCTTGGCCTGGGCAGCCTATGGTCTCGGCTGGATCTCCTTCTACCTTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTCCATCAGAGCAGTCCTaGTCCCCATCACAGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IATHQCEQQECLNHSSPIPSEQS*SPSQRQ Trigger: CTGGCGCTGTGATGGGGACCAGGACTGCTCTGATGG...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTGAGAAGCCAGAAGTCAAGACAGTCTGGGTaGCCATCACAGCGCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: SKFSVLQRAQVSKLRSQKSRQSG*PSQRHV Trigger: CACGTGGCGCTGTGATGGCCACCCAGACTGTCTTGA...CTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTACTTGTACAGCCTCAGAGCTCCAATACTCATCATGGGCCTGGAGGTTAGGAGTCAAGACAGTCTaGGTGGCCATCACAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLTCTASELQYSSWAWRLGVKTV*VAITAP Trigger: TGGCGCTGTGATGGCCACCCAGACTGTCTTGACTCC...TAACCTCCAGGCCCATGATGAGTATTGGAGCTCTGAGGCTGTACAAGTAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | TCAAAGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTGAGAAGCCAGAAGGGAGTCAAGACAGTCTaGGTGGCCATCACAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SKFSVLQRAQVSKLRSQKGVKTV*VAITAP Trigger: TGGCGCTGTGATGGCCACCCAGACTGTCTTGACTCC...CTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR TCA 90 bp | GCCATGACAAAGGAATGCCCAATAAGGAAACATTACTTCAGGTCTCTTCTCCTATGCAGCTCACTCTCCTaGCAGGGTGGGCGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: AMTKECPIRKHYFRSLLLCSSLS*QGGRLQ Trigger: CTGCAGCCGCCCACCCTGTCAGGAGAGTGAGCTGCA...TAGGAGAAGAGACCTGAAGTAATGTTTCCTTATTGGGCATTCCTTTGTCATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR TCA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTGGAGGCGTAGCAATATaGGAAGGGTGGCCGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: IATHQCEQQECLNHSSPIGGVAI*EGWPKP Trigger: TGGTTTCGGCCACCCTTCTCATATTGCTACGCCTCC...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTGAGAAGCCAGAAGAGTCTTCCTCGTCACTaGCATCAGAGCAGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SKFSVLQRAQVSKLRSQKSLPRH*HQSSPG Trigger: ACCAGGACTGCTCTGATGGCAGTGACGAGGAAGACT...CTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR GCA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTCAACACCCCAGCAGCTaGAATAACCCCATAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: IATHQCEQQECLNHSSPIQHPSS*NNPIGT Trigger: AGTGCCTATGGGGTTATTGCAGCTGCTGGGGTGTTG...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGTTCTCTGTGCTCCAAAGAGCCCAGGTCTCAAAGCTGAGAAGCCAGAAGAGAGGTTTTCCTTTCTaGCAGCAGCAGCGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SKFSVLQRAQVSKLRSQKRGFPF*QQQRLL Trigger: AAGGAGTCGCTGCTGCTGTCAGAAAGGAAAACCTCT...CTTCTGGCTTCTCAGCTTTGAGACCTGGGCTCTTTGGAGCACAGAGAACTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR GCA 90 bp | GTCCAGGACACAGACCTCTTGGCTGAAGACTCCCTTTTAAAAGGTAGAAGGAGAAGTCTTCCTCGTCACTaGCATCAGAGCAGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VQDTDLLAEDSLLKGRRRSLPRH*HQSSPG Trigger: ACCAGGACTGCTCTGATGGCAGTGACGAGGAAGACT...TCTCCTTCTACCTTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTACAGCGCCACGTGTGTaGAATACAGACATCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: IATHQCEQQECLNHSSPITAPRV*NTDIIQ Trigger: CTGGATGATGTCTGTATTCCACACACGTGGCGCTGT...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CCA 90 bp | ATAGGAGGAAATGTCCAGGACACAGACCTCTTGGCTGAAGACTCCCTTTTAAAATGGCCGAAACCAGGATaGCACTCAACACCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IGGNVQDTDLLAEDSLLKWPKPG*HSTPQQ Trigger: CTGCTGGGGTGTTGAGTGCCATCCTGGTTTCGGCCA...TTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTGGACATTTCCTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR GCA 90 bp | GGAAATGTCCAGGACACAGACCTCTTGGCTGAAGACTCCCTTTTAAAAGGTAGACAACACCCCAGCAGCTaGAATAACCCCATAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: GNVQDTDLLAEDSLLKGRQHPSS*NNPIGT Trigger: AGTGCCTATGGGGTTATTGCAGCTGCTGGGGTGTTG...TCTACCTTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTGGACATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | TGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGTAACCGTGGCATTCTCCTCCTaGAATATCTTATCAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: CFTAPLSQSDCTQGQVVTVAFSS*NILSIS Trigger: AGAAATTGATAAGATATTCCAGGAGGAGAATGCCAC...GGTTACCACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR TCA 90 bp | GGAAATGTCCAGGACACAGACCTCTTGGCTGAAGACTCCCTTTTAAAAGGTAGATGGCACTGCCCATTCTaGGCACATGACTCAATCCTA | + |
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Preference number: 4 (lower is better) Translates to: GNVQDTDLLAEDSLLKGRWHCPF*AHDSIL Trigger: TAGGATTGAGTCATGTGCTCAGAATGGGCAGTGCCA...TCTACCTTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTGGACATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | CCTAGAACAGAACTGTCTCATAAAACATCAACCAACTGCATCTGGGGAAGAAAGCCACTGGTAAGACACTaGAAGGTGTCTGTCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRTELSHKTSTNCIWGRKPLVRH*KVSVGQ Trigger: CTGCCCGACAGACACCTTCCAGTGTCTTACCAGTGG...CTTTCTTCCCCAGATGCAGTTGGTTGATGTTTTATGAGACAGTTCTGTTCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | ATAGGAGGAAATGTCCAGGACACAGACCTCTTGGCTGAAGACTCCCTTTTAAAAACAGCGCCACGTGTGTaGAATACAGACATCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGGNVQDTDLLAEDSLLKTAPRV*NTDIIQ Trigger: CTGGATGATGTCTGTATTCCACACACGTGGCGCTGT...TTTTAAAAGGGAGTCTTCAGCCAAGAGGTCTGTGTCCTGGACATTTCCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR TCA 90 bp | GCCATGACAAAGGAATGCCCAATAAGGAAACATTACTTCAGGTCTCTTCTCCTACATCAGAGCAACCACTaGTGTTGTCACAGGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AMTKECPIRKHYFRSLLLHQSNH*CCHRSK Trigger: CTTGCTCCTGTGACAACATCAGTGGTTGCTCTGATG...TAGGAGAAGAGACCTGAAGTAATGTTTCCTTATTGGGCATTCCTTTGTCATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR TCA 90 bp | GCCATGACAAAGGAATGCCCAATAAGGAAACATTACTTCAGGTCTCTTCTCCTAAGAGGTTTTCCTTTCTaGCAGCAGCAGCGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AMTKECPIRKHYFRSLLLRGFPF*QQQRLL Trigger: AAGGAGTCGCTGCTGCTGTCAGAAAGGAAAACCTCT...TAGGAGAAGAGACCTGAAGTAATGTTTCCTTATTGGGCATTCCTTTGTCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| 3UTR CAA 72 bp | GGCATTCTAACAGTCCCCACCATTTTACTTAGGAATTaGAGAGTCTGGGAAGAGCTCTGGCCTTGTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: GILTVPTILLRN*RVWEELWPCYS Trigger: TGAGTAACAAGGCCAGAGCTCTTCCCAGACTCTCAAATTCCTAAGTAAAATGGTGGGGACTGTTAGAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS-3UTR CCA 90 bp | GCCATGACAAAGGAATGCCCAATAAGGAAACATTACTTCAGGTCTCTTCTCCTAGTGGCATTCTCCTCCTaGAATATCTTATCAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: AMTKECPIRKHYFRSLLLVAFSS*NILSIS Trigger: AGAAATTGATAAGATATTCCAGGAGGAGAATGCCAC...TAGGAGAAGAGACCTGAAGTAATGTTTCCTTATTGGGCATTCCTTTGTCATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS TCA 90 bp | GGACCCGGGTATGGGCCGGAGCCGGAGCGGCCTCTAGGCCTGTTCTaGGACCAAAGAGGAGCCGCAGCACCAGGCCCAGGGCCACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GPGYGPEPERPLGLF*DQRGAAAPGPGPLP Trigger: GGGCAGTGGCCCTGGGCCTGGTGCTGCGGCTCCTCTTTGGTCTCAGAACAGGCCTAGAGGCCGCTCCGGCTCCGGCCCATACCCGGGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS TCA 90 bp | GCCCTGGTGGGGGCAGATAACCCTGACCTCGGAGGCGTAGCAATATaGGAAGGGTGGCCGAAACCAGGATGGCACTCAACACCCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ALVGADNPDLGGVAI*EGWPKPGWHSTPQQ Trigger: CTGCTGGGGTGTTGAGTGCCATCCTGGTTTCGGCCACCCTTCTCATATTGCTACGCCTCCGAGGTCAGGGTTATCTGCCCCCACCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CAA 90 bp | CTTGCGTGTTTCACGGCTCCTTTGTCCCAGTCTGACTGCACTCAGGGCCAGGTGGAGCAACCACTGATGTaGTCACAGGAGCAAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LACFTAPLSQSDCTQGQVEQPLM*SQEQGR Trigger: CCTTCCTTGCTCCTGTGACAACATCAGTGGTTGCTC...CACCTGGCCCTGAGTGCAGTCAGACTGGGACAAAGGAGCCGTGAAACACGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS GCA 90 bp | GTCAGCTCTAGAGCCTGCTGCAAGAAGGTACCGGGTGACCAGCCCTaGGTGGTGAGAGGTCAAAATCAGAAACAAAAGCCTTCCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSSRACCKKVPGDQP*VVRGQNQKQKPSSP Trigger: TGGGCTGGAAGGCTTTTGTTTCTGATTTTGACCTCTCACCACGCAGGGCTGGTCACCCGGTACCTTCTTGCAGCAGGCTCTAGAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087559.8 |
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| CDS CCA 90 bp | ACAGACATCATCCAGTATGCAATGCAGCTCACTCTCCTGACAGGGTaGGCGGCTGCAGTTGAGGTTCTTGTCAGAGACATCAGAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: TDIIQYAMQLTLLTG*AAAVEVLVRDIRAT Trigger: GGTTGCTCTGATGTCTCTGACAAGAACCTCAACTGCAGCCGCCCACCCTGTCAGGAGAGTGAGCTGCATTGCATACTGGATGATGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS CCA 90 bp | ACTGGAGTCAAGACAGTCTGGGTGGCCATCACAGCGCCACGTGTGTaGAATACAGACATCATCCAGTATGCAATGCAGCTCACTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TGVKTVWVAITAPRV*NTDIIQYAMQLTLL Trigger: CAGGAGAGTGAGCTGCATTGCATACTGGATGATGTCTGTATTCCACACACGTGGCGCTGTGATGGCCACCCAGACTGTCTTGACTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 90 bp | TGTGGAATACAGACATCATCCAGTATGCAATGCAGCTCACTCTCCTaGCAGGGTGGGCGGCTGCAGTTGAGGTTCTTGTCAGAGACATCA | + |
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Preference number: 5 (lower is better) Translates to: CGIQTSSSMQCSSLS*QGGRLQLRFLSETS Trigger: TGATGTCTCTGACAAGAACCTCAACTGCAGCCGCCCACCCTGTCAGGAGAGTGAGCTGCATTGCATACTGGATGATGTCTGTATTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS-3UTR CAA 90 bp | ATAGCCACCCATCAATGTGAGCAGCAGGAGTGTCTAAACCACAGTAGCCCCATTGAGCAACCACTGATGTaGTCACAGGAGCAAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: IATHQCEQQECLNHSSPIEQPLM*SQEQGR Trigger: CCTTCCTTGCTCCTGTGACAACATCAGTGGTTGCTC...AATGGGGCTACTGTGGTTTAGACACTCCTGCTGCTCACATTGATGGGTGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS CCA 90 bp | TTCTCCATGGTCGTAGAAATCCTTGTAGTTGTGGCATTCTCCTCCTaGAATATCTTATCAATTTCTGTGTCAGTGTCACAGCTGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FSMVVEILVVVAFSS*NILSISVSVSQLSS Trigger: TGAGCTCAGCTGTGACACTGACACAGAAATTGATAAGATATTCCAGGAGGAGAATGCCACAACTACAAGGATTTCTACGACCATGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 72 bp | TATGGGCCGGAGCCGGAGCGGCCTCTAGGCCTGTTCTaGGACCAAAGAGGAGCCGCAGCACCAGGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: YGPEPERPLGLF*DQRGAAAPGPG Trigger: CCCTGGGCCTGGTGCTGCGGCTCCTCTTTGGTCTCAGAACAGGCCTAGAGGCCGCTCCGGCTCCGGCCCATA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002379.15 |
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| CDS GCA 72 bp | GGTGTCTGTCGGGCAGGAGTCAGCTCTAGAGCCTGCTaGAAGAAGGTACCGGGTGACCAGCCCTGCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GVCRAGVSSRAC*KKVPGDQPCVV Trigger: CACCACGCAGGGCTGGTCACCCGGTACCTTCTTGCAGCAGGCTCTAGAGCTGACTCCTGCCCGACAGACACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087559.8 |
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| CDS GCA 72 bp | AGCGCCACGTGTGTGGAATACAGACATCATCCAGTATaGAATGCAGCTCACTCTCCTGACAGGGTGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SATCVEYRHHPV*NAAHSPDRVGG Trigger: GCCGCCCACCCTGTCAGGAGAGTGAGCTGCATTGCATACTGGATGATGTCTGTATTCCACACACGTGGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 72 bp | GCTGCAAGAAGGTACCGGGTGACCAGCCCTGCGTGGTaGGAGGTCAAAATCAGAAACAAAAGCCTTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AARRYRVTSPAW*EVKIRNKSLPA Trigger: GGCTGGAAGGCTTTTGTTTCTGATTTTGACCTCTCACCACGCAGGGCTGGTCACCCGGTACCTTCTTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087559.8 |
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| CDS TCA 72 bp | CAGACATCATCCAGTATGCAATGCAGCTCACTCTCCTaGCAGGGTGGGCGGCTGCAGTTGAGGTTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QTSSSMQCSSLS*QGGRLQLRFLS Trigger: TGACAAGAACCTCAACTGCAGCCGCCCACCCTGTCAGGAGAGTGAGCTGCATTGCATACTGGATGATGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS CCA 72 bp | ATCCAGTATGCAATGCAGCTCACTCTCCTGACAGGGTaGGCGGCTGCAGTTGAGGTTCTTGTCAGAGACATC | + |
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Preference number: 6 (lower is better) Translates to: IQYAMQLTLLTG*AAAVEVLVRDI Trigger: GATGTCTCTGACAAGAACCTCAACTGCAGCCGCCCACCCTGTCAGGAGAGTGAGCTGCATTGCATACTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 72 bp | CAAGGAAGGGCAGACTGTGGTTGGCACTGCCCATTCTaGGCACATGACTCAATCCTACAGTCTTCCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGRADCGWHCPF*AHDSILQSSSS Trigger: TGACGAGGAAGACTGTAGGATTGAGTCATGTGCTCAGAATGGGCAGTGCCAACCACAGTCTGCCCTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS CCA 72 bp | AAGACAGTCTGGGTGGCCATCACAGCGCCACGTGTGTaGAATACAGACATCATCCAGTATGCAATGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: KTVWVAITAPRV*NTDIIQYAMQL Trigger: GAGCTGCATTGCATACTGGATGATGTCTGTATTCCACACACGTGGCGCTGTGATGGCCACCCAGACTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 72 bp | AGCTGCAATAACCCCATAGGCACTTGGGTTTCGGGATaGGTCCCCAGCAGAGGTAAATGTTACATTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SCNNPIGTWVSG*VPSRGKCYIPE Trigger: TTCAGGAATGTAACATTTACCTCTGCTGGGGACTCATCCCGAAACCCAAGTGCCTATGGGGTTATTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS TCA 72 bp | GGAATATCTTATCAATTTCTGTGTCAGTGTCACAGCTaGGCTCATCACTGGAGTCAAGACAGTCTGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GISYQFLCQCHS*AHHWSQDSLGG Trigger: GCCACCCAGACTGTCTTGACTCCAGTGATGAGCTCAGCTGTGACACTGACACAGAAATTGATAAGATATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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| CDS CCA 72 bp | GTCGTAGAAATCCTTGTAGTTGTGGCATTCTCCTCCTaGAATATCTTATCAATTTCTGTGTCAGTGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: VVEILVVVAFSS*NILSISVSVSQ Trigger: CTGTGACACTGACACAGAAATTGATAAGATATTCCAGGAGGAGAATGCCACAACTACAAGGATTTCTACGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002379.15 ENSMUST00000087559.8 |
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